Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,925,304 |
A→C |
12.3% |
Q161P (CAG→CCG) |
prpC → |
2‑methylcitrate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,925,304 | 0 | A | C | 12.3%
| 318.7
/ 4.3
| 182 | Q161P (CAG→CCG) | prpC | 2‑methylcitrate synthase |
| Reads supporting (aligned to +/- strand): ref base A (103/50); new base C (3/25); total (106/76) |
| Fisher's exact test for biased strand distribution p-value = 1.80e-08 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 183 total aligned reads displayed.
GCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCTTCCACCTT > NZ_CP022686/3925168‑3925442
|
gcgcTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTTCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGcc < 6:375384/140‑1 (MQ=255)
cTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGa > 1:1081976/1‑140 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGa < 4:874974/138‑1 (MQ=255)
ggCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGTGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAAc > 2:612849/1‑140 (MQ=255)
gcggCACGCTGCCAGAAAATGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATGCTTCTCTACTGGTATCACTACAGCCACACCGGCGAACGCATCCAGCCGGaaa < 3:595009/135‑1 (MQ=255)
gCACGCTGCAATAAAAAGAGGGGCACACGGTTTCTGGTGCGCGGTATATTGCCGACAAACTGCTGGCGTCACTTTGTTCTATTCTTCTCTACTGGTATCACTACAGCCACAACGGCTAACGCATCCAGCCGTAAACttat < 2:809653/140‑1 (MQ=255)
cACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTAAAGCCACAACGGCGAACGCATACAGCCGGAAACtgatg > 7:23615/1‑140 (MQ=255)
ggtgcccATAAAAATAGGGGCACACCGTTTCTGGTGCGGGGGATATTCCCGAATATTTGCTGGCTTCACTTAGTTCGATTCTTCTATCCTGGTATAAATCCAGCCAAAACGGCGAACGCTTCCACCCTTAAAATTATgac < 6:422208/135‑1 (MQ=255)
tGCCATAAAAAGAGGGGCACACCGTTTCTGGGGCGGGGGATATGGCCGAAAACCTGCTGGCGTCAATTAGTTCGATTCTTCTCTACTGTTATCAATACAGCCACAACGGCTAACGCATCACGCCGTAAACTGATgacgac < 8:27559/140‑1 (MQ=255)
tGCCAGAAAAAGAGGGGCCCACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCTGCACTTAGTTCGATTCTTCTCTACTTGTATCACTACCGCAACAACGCCGAACGCATCCCGCCGGAACCAGAGgccgac > 7:137020/1‑140 (MQ=255)
tGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCTATTCTTCTCTACTGGTATCACTACAGCCACACCGGCGAACGCATCCCGCCGGAAACTGATgacgac > 5:893941/1‑140 (MQ=255)
ccaataaaatGGGGGGCAAACCGTTGCGGGGGCGCGGGATATTGACGAAAAACTGGTGGCGTCACTTAGTTCGATTATACTCTACTGTTATAACTAAACCAACACCGGCGAACGCATCCAGCCGTAAACTGATGACGAct < 8:520691/135‑1 (MQ=255)
ccAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCTCTTAGTGCGATTCTTCTCTTCTGGTCTCACTACAGCCACAACGGCTCACGCATCCAGCCGTAAACTGATGCCGActc > 7:722556/1‑140 (MQ=255)
gAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGCACGCATCCAGCCGGAAACTGATGAAGACTCTAt > 2:71261/1‑140 (MQ=255)
agagGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACCGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTAtcgtcg > 8:52395/1‑140 (MQ=255)
cggggCACACCGTTGCTGGTGGGGGGGATATTGCCGAAAAACTGCTGGCGGCACTAAGTGCTAATATTCTCTACTGGTAACAAAACCGCCACACCGGCTACCGCATCCCGCCGTAAACTGATGACGACTCTATcggcg < 4:959876/137‑1 (MQ=255)
gCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACt > 2:73570/1‑140 (MQ=255)
gCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACt > 2:33677/1‑140 (MQ=255)
cacaCCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGACGGAAACTGATGACGACTCTATCGGCGGTCACtt > 8:911461/1‑140 (MQ=255)
cacCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTcc > 6:930231/1‑140 (MQ=255)
gTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGCCGACTCTATCGGCGGTCACTTCCTGCATctgctg > 2:1105201/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTTGTATAACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCCGCGGTCACTTCCTTCATCTGCTGCa > 5:454417/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCtgctgcc > 2:1129785/1‑139 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTgcagca > 1:778451/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 5:407540/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCATGCATctgctg > 4:708944/1‑138 (MQ=255)
gcgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 4:456122/1‑138 (MQ=255)
cgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACgg > 7:1020640/1‑140 (MQ=255)
tGCCGACAAACTGCTGGCGTCACTTAGTTCTATTCTTCTCTCCTGGTATCCCTACCCCCCCCCCGCCGAACCCAGCCCCCCGCAAACTGCTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGaaaa < 4:395351/138‑1 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCCCAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 5:760148/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGACCGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTGCATCTGCTGCAAGGCGAAAAGCCGTCg > 6:664935/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 7:1011719/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 5:309845/1‑140 (MQ=255)
aaaCTGCTGGCGTCACTTATTTCGATTCTTCTCTACTGGTATCACAACCCCCACACCGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCa < 5:603350/140‑1 (MQ=255)
tgctgGCGTAACTTTGTTCGTTTCTTCTCTACGGGTATCACTACAGCCACACCGGCGAACGCTCCCAGCCTGAAAGTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGc < 6:812874/140‑1 (MQ=255)
tgcggGGGTCACTTAGTTCGATTCTTCTCTCCTGGTATCACTACAGCCACCACGGCGAACGCATCCAGCCGGAAACTGAGCACGACTCTATCGGCGGGCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGc < 8:643814/140‑1 (MQ=255)
cGTCACTTTGTTCGATTTTTCTCTACTGGTACCAAACCAGCCACAACGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTggg < 4:6690/138‑1 (MQ=255)
cctccgTTCCATGCTTCTCAACTGGACACACCACCGCCCCCAGGGCCACCGCATCCACCCGTAAAGTCTAGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 1:751859/135‑1 (MQ=255)
aCTTATTTCTATTCTTCTCTCCTGGTATCAATCCCCCCACAACGGCTAACGCAACCAGCCGTAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 1:58037/140‑1 (MQ=255)
aCTTATCTCCATTCTACTCTCCTTGTATCACTCCAGCCCCACCGGCGAACGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 8:148284/140‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaaa < 4:785024/138‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGAATCCAGCCGGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaaa < 4:677627/138‑1 (MQ=255)
ttAGTTCGCTTCTGCTCTACGGGTCTCACTACAGCCACAACGGCTAACGCATCCAGCCGGAAACTGAGCACGACTCTATCGGCGGTAACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCg < 5:117283/140‑1 (MQ=255)
ttAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg > 3:579320/1‑138 (MQ=255)
aGTTCTATTCTTCTCTACGGGTATCACTACCGCCCCAACGGCGAACGCACCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCg < 3:170814/138‑1 (MQ=255)
gctctaTTCTTCGCTACTGGTATCACAACCGCCACAACGGCGAACGCATCCCGCCGTAAACAGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCGGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATg < 6:646670/135‑1 (MQ=255)
cGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGc > 3:927700/1‑138 (MQ=255)
aTTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat > 8:231410/1‑140 (MQ=255)
aTTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat > 6:347677/1‑140 (MQ=255)
aTTCTTCTCTACGGGTATCACTACAGCCACAACGGCTACCGCAGCCAGCCGGAAAGTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 4:1070577/138‑1 (MQ=255)
aTTCTTATATCCTGTTATCAATAAACCCACAACGGAGAACCCACCCCCGCCTAACCTGAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 1:1081633/140‑1 (MQ=255)
tcttctCTACTGGTATCAATACACCCACACCGGCGAACGCATCCAGCCGTAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 3:1142835/138‑1 (MQ=255)
tctcTACTGGTATCACAACAGCCACACCGGCTACCGAATCCAGCCGGAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 2:854226/140‑1 (MQ=255)
tcgatACTGTAATCACTACACCCACACCGCCGAACGCATCCAGCCGCAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGGCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 2:353806/136‑1 (MQ=255)
actctAGTGTTATCACTACAGCCACACCGCCTACCGCTTCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 2:988756/139‑1 (MQ=255)
ctctACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGcg > 1:84675/1‑139 (MQ=255)
tctACTGGTATCACTACAGCCACACCGGCGAACGCATCCCGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTg < 8:405101/140‑1 (MQ=255)
tctACTGGTAACACTACACCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 4:141480/138‑1 (MQ=255)
aCTGGAAGCACTACTGCCACAAGGGCGAACGCAGCCCGCGGTAAAGTGCGCACGACTGTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTgg < 4:972035/138‑1 (MQ=255)
cTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGTCTGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCTTCGCAAAGCTGGGAAAAGGCGAGGCATATCTCGCTGGTGc > 5:623557/1‑140 (MQ=255)
gaaTCACTACTGCCCCAACGGCGAACGCATCCTCCCGTAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt < 6:151681/138‑1 (MQ=255)
gTATCACTACCCCCACAACGGCGAACGCATCCAGCCGGAAACTGCGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt < 8:686508/140‑1 (MQ=255)
gTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAACAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 6:548845/1‑140 (MQ=255)
gTATCACTACAGCCACAACGGCGAAAGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 6:705033/1‑140 (MQ=255)
gTATCACTACAGCCACAAAGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCACAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCGGt > 6:875584/1‑140 (MQ=255)
aaTCACTACAGCCACAACGGCGAACGCATCCCGCCGTAAACTTATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTa < 2:436650/139‑1 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCCGTCACTTCCTGCATCTCCTGCACGGCGACAATCCGTCGCAAAGCTGGGAAAAGTCGATGCATATCTCGCTGGTGCTGt > 3:11574/1‑138 (MQ=255)
aTCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACCCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTAc > 1:624396/1‑140 (MQ=255)
taacaaCAGCCACACGGGCTAACGCATCCACCCTGAAACTTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACg < 5:518164/135‑1 (MQ=255)
acACTACCCCCACAACGGCGAACGCTCCCAGCGGGAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACg < 2:561596/139‑1 (MQ=255)
acACTACACCCACACCCGCGAACCCATCACGCCGGAAAGTCTTCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTa < 4:641852/137‑1 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACTGCTAAAAGCCGTCGCAAAGCTGTGAAAAGGCGAGGCATATCTCGCTGGTGATGTACGcc > 6:243256/1‑140 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGcc > 6:477356/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGCCGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCAGa > 5:367201/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCCCTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGa > 6:11958/1‑140 (MQ=255)
tACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCCTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCgc > 1:519211/1‑139 (MQ=255)
cAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGa > 3:518918/1‑138 (MQ=255)
cgCCACAACGGCGAACGAATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca < 2:1047755/139‑1 (MQ=255)
aGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacc > 2:643489/1‑139 (MQ=255)
gCCACACCGGCGAACGCATCCACCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 8:94032/140‑1 (MQ=255)
cccACAACGGCTAACGCATCCCGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 7:418813/139‑1 (MQ=255)
cccACAACGGCTAACGCATCCCGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 1:33677/139‑1 (MQ=255)
ccACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca > 3:138382/1‑138 (MQ=255)
ccACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACg > 5:1091390/1‑140 (MQ=255)
acaACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAATCCGTCGCAAAGCTGGGAAAAGGCGAAGCATATCTCGCTGGTGCTGTACGCCGAACACGAg > 1:674041/1‑140 (MQ=255)
acaACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTCCGCCGAacacc > 3:652339/1‑137 (MQ=255)
caACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACCCGAGt > 7:83162/1‑140 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGt > 3:1140955/1‑138 (MQ=255)
gtcgaacgaaTCAAGCAGCAAACTGATGACGACTCTATCGGCGGTCACGTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGttt < 4:532810/136‑1 (MQ=255)
ggCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGttt > 4:1152236/1‑138 (MQ=255)
gctaaCGCATCCCGCAGCAAACTGTTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAAc < 6:774968/137‑1 (MQ=255)
cGAACGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTCCATCTGCTGCACGGCGAAAAGCCGTCGCCAAGCTGGGAAAAGGCGAGGCATATCTCGCTGGTGCTGTACGCCGCACACGAGTTTCACg > 1:88365/1‑140 (MQ=255)
cGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACg > 1:821987/1‑140 (MQ=255)
cGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACg > 6:1107563/1‑140 (MQ=255)
aaCGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACg > 3:870814/1‑138 (MQ=255)
aCGCATCCAGCCGGAAACTGATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCtt < 8:20934/140‑1 (MQ=255)
aCGAATCCCGCCGGAAACTGATCACGACTCTATCGGCGGGCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCtt < 1:224837/140‑1 (MQ=255)
cGCATCCAGCCGGAAACTGATGACGCCTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCt > 3:783801/1‑138 (MQ=255)
aTCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCAGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCTTCCAc < 1:38902/140‑1 (MQ=255)
ccAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCTTCCACCt > 2:934009/1‑140 (MQ=255)
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GCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTTAACGCTTCCACCTT > NZ_CP022686/3925168‑3925442
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
