Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
13 1 2
14 1 2
15 1 2
16 1 2
13141516 1 1
6 6 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 1903 2811
Multiple Base Substitutions 103 130
Deletions 29 65
Insertions 21 50
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 2056 3056

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 115 0 276.2 7960526 99.2% 7896841 150.0
A13 F56 I0 R1 198 0 55.3 2323794 95.3% 2214575 126.9
A13 F56 I15 R1 126 0 117.1 3948514 95.2% 3758985 126.3
A14 F56 I0 R2 216 0 87.9 3565874 95.6% 3408975 127.2
A14 F56 I20 R2 1958 0 92.1 3575798 91.1% 3257551 126.8
A15 F58 I0 R3 247 0 66.2 2815674 94.9% 2672074 126.8
A15 F58 I6 R3 125 0 101.0 3774540 95.0% 3585813 126.5
A16 F57 I0 R4 226 0 68.5 3221688 95.0% 3060603 125.7
A16 F57 I19 R4 125 0 90.3 3545000 95.6% 3389020 127.6
A13141516 F55 I0 R1 152 0 392.1 11706698 99.5% 11648164 150.0

Mutation Needle Plot

Mutation Targets

Entries to show