Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
13 3 4
14 3 4
15 3 4
16 3 4
5 13 17

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 19 74
Multiple Base Substitutions 0 0
Deletions 7 54
Insertions 3 34
Mobile Element Insertions 3 51
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 32 213

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 10 0 120.0 5835852 97.6% 5695791 99.0
A13 F16 I0 R1 107 0 966.2 31162000 98.1% 30569922 147.2
A13 F27 I0 R1 115 0 185.7 5829562 99.0% 5771266 149.7
A13 F59 I0 R1 1957 0 106.8 3441756 96.6% 3324736 149.5
A13 F59 I1 R1 11 0 78.6 2606234 95.7% 2494165 148.8
A14 F16 I0 R1 136 0 682.6 21926406 98.4% 21575583 147.5
A14 F27 I0 R1 99 0 262.4 8243684 99.0% 8161247 149.5
A14 F58 I0 R1 408 0 82.5 2635896 97.0% 2556819 149.8
A14 F58 I1 R1 11 0 70.7 2457154 96.0% 2358867 148.1
A15 F16 I0 R1 122 0 419.7 13393088 98.8% 13232370 148.5
A15 F27 I0 R1 130 0 175.4 5505586 99.1% 5456035 149.6
A15 F57 I0 R1 106 0 84.0 2708228 97.6% 2643230 149.9
A15 F57 I1 R1 11 0 68.2 2369658 95.2% 2255914 144.4
A16 F16 I0 R1 167 0 421.5 13560332 98.6% 13370487 146.7
A16 F27 I0 R1 195 0 154.1 4831542 99.0% 4783226 149.7
A16 F57 I0 R1 1983 0 105.6 3468324 95.6% 3315717 149.7
A16 F57 I1 R1 11 0 75.2 2606374 96.3% 2509938 146.8

Mutation Needle Plot

Mutation Targets

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