mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 4,139 | G→A | 7.2% | D136N (GAT→AAT) ‡ | thrC → | L‑threonine synthase |
| RA | 4,140 | A→T | 7.2% | D136V (GAT→GTT) ‡ | thrC → | L‑threonine synthase |
| RA | 4,141 | T→C | 7.3% | D136D (GAT→GAC) ‡ | thrC → | L‑threonine synthase |
| RA | 9,907 | A→C | 7.9% | intergenic (+14/+21) | mog → / ← satP | molybdochelatase incorporating molybdenum into molybdopterin/succinate‑acetate transporter |
| RA | 9,908 | G→T | 5.8% | intergenic (+15/+20) | mog → / ← satP | molybdochelatase incorporating molybdenum into molybdopterin/succinate‑acetate transporter |
| RA | 10,619 | G→T | 6.5% | intergenic (‑125/+24) | satP ← / ← yaaW | succinate‑acetate transporter/UPF0174 family protein |
| RA | 10,620 | A→T | 5.9% | intergenic (‑126/+23) | satP ← / ← yaaW | succinate‑acetate transporter/UPF0174 family protein |
| RA | 10,621 | A→T | 5.9% | intergenic (‑127/+22) | satP ← / ← yaaW | succinate‑acetate transporter/UPF0174 family protein |
| RA | 10,622 | A→C | 6.0% | intergenic (‑128/+21) | satP ← / ← yaaW | succinate‑acetate transporter/UPF0174 family protein |
| RA | 18,678 | A→G | 5.9% | intergenic (+23/‑37) | nhaA → / → nhaR | sodium‑proton antiporter/transcriptional activator of nhaA |
| RA | 18,680 | A→T | 6.0% | intergenic (+25/‑35) | nhaA → / → nhaR | sodium‑proton antiporter/transcriptional activator of nhaA |
| RA | 18,681 | A→T | 6.8% | intergenic (+26/‑34) | nhaA → / → nhaR | sodium‑proton antiporter/transcriptional activator of nhaA |
| RA | 18,683 | C→T | 6.0% | intergenic (+28/‑32) | nhaA → / → nhaR | sodium‑proton antiporter/transcriptional activator of nhaA |
| RA | 23,601 | C→T | 5.5% | P404L (CCG→CTG) | ileS → | isoleucyl‑tRNA synthetase |
| RA | 53,272 | T→G | 8.9% | M49L (ATG→CTG) | pdxA ← | 4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent |
| RA | 53,376 | G→A | 7.3% | P14L (CCC→CTC) | pdxA ← | 4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent |
| RA | 53,379 | T→C | 7.1% | E13G (GAG→GGG) | pdxA ← | 4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent |
| RA | 59,301 | A→C | 6.0% | intergenic (+22/+386) | yabP → / ← rluA | pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent |
| RA | 59,302 | C→A | 5.2% | intergenic (+23/+385) | yabP → / ← rluA | pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent |
| RA | 65,808 | T→A | 6.7% | intergenic (‑28/+47) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase |
| RA | 65,809 | G→T | 6.7% | intergenic (‑29/+46) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase |
| RA | 65,811 | G→C | 6.9% | intergenic (‑31/+44) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase |
| RA | 65,813 | A→C | 6.7% | intergenic (‑33/+42) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase |
| RA | 65,814 | T→A | 6.9% | intergenic (‑34/+41) | polB ← / ← araD | DNA polymerase II/L‑ribulose‑5‑phosphate 4‑epimerase |
| RA | 72,198 | A→G | 6.2% | intergenic (+83/+31) | yabI → / ← thiQ | DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase |
| RA | 72,199 | A→C | 6.9% | intergenic (+84/+30) | yabI → / ← thiQ | DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase |
| RA | 72,205 | T→G | 8.8% | intergenic (+90/+24) | yabI → / ← thiQ | DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase |
| RA | 72,206 | C→A | 8.7% | intergenic (+91/+23) | yabI → / ← thiQ | DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase |
| RA | 72,212 | G→T | 7.6% | intergenic (+97/+17) | yabI → / ← thiQ | DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase |
| RA | 72,213 | C→T | 7.8% | intergenic (+98/+16) | yabI → / ← thiQ | DedA family inner membrane protein/thiamine/thiamine pyrophosphate ABC transporter ATPase |
| RA | 78,830 | T→A | 6.2% | intergenic (+31/+18) | setA → / ← leuD | broad specificity sugar efflux system/3‑isopropylmalate dehydratase small subunit |
| RA | 78,831 | T→A | 5.1% | intergenic (+32/+17) | setA → / ← leuD | broad specificity sugar efflux system/3‑isopropylmalate dehydratase small subunit |
| RA | 83,587 | A→C | 10.6% | intergenic (‑58/+35) | leuA ← / ← leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| RA | 83,590 | G→T | 10.3% | intergenic (‑61/+32) | leuA ← / ← leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| RA | 87,881 | A→G | 6.9% | intergenic (+33/‑147) | ilvH → / → cra | acetolactate synthase 3, small subunit, valine‑sensitive/transcriptional repressor‑activator for carbon metabolism |
| RA | 87,884 | T→A | 6.9% | intergenic (+36/‑144) | ilvH → / → cra | acetolactate synthase 3, small subunit, valine‑sensitive/transcriptional repressor‑activator for carbon metabolism |
| RA | 87,887 | C→T | 6.8% | intergenic (+39/‑141) | ilvH → / → cra | acetolactate synthase 3, small subunit, valine‑sensitive/transcriptional repressor‑activator for carbon metabolism |
| RA | 89,066 | C→A | 5.6% | intergenic (+34/‑568) | cra → / → mraZ | transcriptional repressor‑activator for carbon metabolism/RsmH methytransferase inhibitor |
| RA | 95,062 | A→T | 5.8% | D138V (GAC→GTC) | murF → | UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase |
| RA | 95,070 | G→A | 6.0% | V141I (GTA→ATA) ‡ | murF → | UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase |
| RA | 95,071 | T→C | 7.1% | V141A (GTA→GCA) ‡ | murF → | UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase |
| RA | 95,079 | A→T | 6.8% | T144S (ACG→TCG) | murF → | UDP‑N‑acetylmuramoyl‑tripeptide:D‑alanyl‑D‑ alanine ligase |
| RA | 96,089 | C→A | 5.2% | L30M (CTG→ATG) | mraY → | phospho‑N‑acetylmuramoyl‑pentapeptide transferase |
| RA | 106,831 | T→A | 9.6% | I92N (ATT→AAT) | lpxC → | UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase |
| RA | 111,013 | G→A | 6.7% | intergenic (+29/‑31) | secA → / → mutT | preprotein translocase subunit, ATPase/dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
| RA | 111,016 | T→C | 6.9% | intergenic (+32/‑28) | secA → / → mutT | preprotein translocase subunit, ATPase/dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
| RA | 111,564 | T→G | 5.4% | intergenic (+131/+85) | mutT → / ← yacG | dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase/DNA gyrase inhibitor |
| RA | 120,154 | Δ1 bp | 6.9% | intergenic (+19/+24) | ampE → / ← aroP | ampicillin resistance inner membrane protein; putative signaling protein in beta‑lactamase regulation/aromatic amino acid transporter |
| RA | 120,158:1 | +A | 7.1% | intergenic (+23/+20) | ampE → / ← aroP | ampicillin resistance inner membrane protein; putative signaling protein in beta‑lactamase regulation/aromatic amino acid transporter |
| RA | 126,147 | T→G | 6.9% | A151A (GCT→GCG) | aceF → | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 |
| RA | 127,606 | C→G | 5.2% | intergenic (+19/‑306) | aceF → / → lpd | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2/dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2‑oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase |
| RA | 134,166 | A→G | 5.0% | Q851R (CAG→CGG) | acnB → | aconitate hydratase 2; aconitase B; 2‑methyl‑cis‑aconitate hydratase |
| RA | 136,530 | C→T | 6.2% | intergenic (‑66/+40) | speE ← / ← yacC | spermidine synthase (putrescine aminopropyltransferase)/PulS_OutS family protein |
| RA | 136,532 | G→C | 5.8% | intergenic (‑68/+38) | speE ← / ← yacC | spermidine synthase (putrescine aminopropyltransferase)/PulS_OutS family protein |
| RA | 136,535 | G→C | 6.3% | intergenic (‑71/+35) | speE ← / ← yacC | spermidine synthase (putrescine aminopropyltransferase)/PulS_OutS family protein |
| RA | 136,537 | A→G | 6.2% | intergenic (‑73/+33) | speE ← / ← yacC | spermidine synthase (putrescine aminopropyltransferase)/PulS_OutS family protein |
| RA | 138,662 | T→G | 5.8% | intergenic (+29/+173) | cueO → / ← gcd | multicopper oxidase (laccase)/glucose dehydrogenase |
| RA | 143,533 | T→C | 6.8% | L252P (CTG→CCG) ‡ | yadG → | putative ABC transporter ATPase |
| RA | 143,534 | G→A | 6.7% | L252L (CTG→CTA) ‡ | yadG → | putative ABC transporter ATPase |
| RA | 144,806 | C→A | 6.1% | S77* (TCA→TAA) | yadI → | putative PTS Enzyme IIA |
| RA | 144,809 | T→A | 5.8% | L78* (TTA→TAA) | yadI → | putative PTS Enzyme IIA |
| RA | 144,812 | T→G | 5.5% | L79* (TTA→TGA) | yadI → | putative PTS Enzyme IIA |
| RA | 151,519 | A→C | 10.3% | I27M (ATT→ATG) | yadK ← | putative fimbrial‑like adhesin protein |
| RA | 151,522 | G→T | 9.1% | A26A (GCC→GCA) | yadK ← | putative fimbrial‑like adhesin protein |
| RA | 163,417 | A→T | 5.1% | K438I (AAA→ATA) ‡ | hrpB → | putative ATP‑dependent helicase |
| RA | 163,418 | A→T | 5.1% | K438N (AAA→AAT) ‡ | hrpB → | putative ATP‑dependent helicase |
| RA | 163,419 | A→T | 5.7% | I439F (ATT→TTT) | hrpB → | putative ATP‑dependent helicase |
| RA | 169,748 | T→A | 7.5% | intergenic (+21/‑30) | fhuA → / → fhuC | ferrichrome outer membrane transporter/iron(3+)‑hydroxamate import ABC transporter ATPase |
| RA | 169,749 | T→A | 7.7% | intergenic (+22/‑29) | fhuA → / → fhuC | ferrichrome outer membrane transporter/iron(3+)‑hydroxamate import ABC transporter ATPase |
| RA | 176,977 | A→G | 7.5% | intergenic (+23/+24) | erpA → / ← yadS | iron‑sulfur cluster insertion protein/UPF0126 family inner membrane protein |
| RA | 176,978 | A→T | 6.0% | intergenic (+24/+23) | erpA → / ← yadS | iron‑sulfur cluster insertion protein/UPF0126 family inner membrane protein |
| RA | 176,979 | C→T | 6.5% | intergenic (+25/+22) | erpA → / ← yadS | iron‑sulfur cluster insertion protein/UPF0126 family inner membrane protein |
| RA | 216,066 | A→G | 5.4% | intergenic (+87/+113) | nlpE → / ← yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| RA | 216,067 | A→C | 5.3% | intergenic (+88/+112) | nlpE → / ← yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| RA | 216,073 | T→A | 5.5% | intergenic (+94/+106) | nlpE → / ← yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| RA | 216,074 | T→A | 5.2% | intergenic (+95/+105) | nlpE → / ← yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| RA | 216,080 | G→T | 5.6% | intergenic (+101/+99) | nlpE → / ← yaeF | lipoprotein involved with copper homeostasis and adhesion/putative lipoprotein |
| RA | 238,146 | T→C | 5.4% | intergenic (+26/+111) | yafT → / ← ykfM | lipoprotein/lethality reduction protein, putative inner membrane protein |
| RA | 240,840 | T→G | 7.6% | intergenic (+24/+19) | ivy → / ← fadE | inhibitor of c‑type lysozyme, periplasmic/acyl coenzyme A dehydrogenase |
| RA | 240,841 | T→A | 6.9% | intergenic (+25/+18) | ivy → / ← fadE | inhibitor of c‑type lysozyme, periplasmic/acyl coenzyme A dehydrogenase |
| RA | 240,842 | T→A | 6.8% | intergenic (+26/+17) | ivy → / ← fadE | inhibitor of c‑type lysozyme, periplasmic/acyl coenzyme A dehydrogenase |
| RA | 240,843 | C→A | 6.7% | intergenic (+27/+16) | ivy → / ← fadE | inhibitor of c‑type lysozyme, periplasmic/acyl coenzyme A dehydrogenase |
| RA | 248,756 | T→C | 5.7% | pseudogene (1315/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 248,766 | A→G | 6.6% | pseudogene (1305/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 248,767 | C→G | 7.3% | pseudogene (1304/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 248,769 | G→C | 8.5% | pseudogene (1302/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 248,772 | G→C | 6.6% | pseudogene (1299/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 248,774 | C→G | 6.7% | pseudogene (1297/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 248,775 | C→T | 6.7% | pseudogene (1296/1713 nt) | lfhA ← | pseudogene, flagellar system protein, promoterless fragment; flagellar biosynthesis |
| RA | 252,589 | G→C | 7.6% | A97P (GCA→CCA) | yafO → | mRNA interferase toxin of the YafO‑YafN toxin‑antitoxin system |
| RA | 252,594 | G→C | 5.4% | W98C (TGG→TGC) | yafO → | mRNA interferase toxin of the YafO‑YafN toxin‑antitoxin system |
| RA | 254,223 | A→T | 9.9% | intergenic (+21/+36) | prfH → / ← pepD | pseudogene, RF‑1 domain family; probable peptide chain release factor/aminoacyl‑histidine dipeptidase (peptidase D) |
| RA | 254,228 | A→T | 11.6% | intergenic (+26/+31) | prfH → / ← pepD | pseudogene, RF‑1 domain family; probable peptide chain release factor/aminoacyl‑histidine dipeptidase (peptidase D) |
| RA | 254,233 | A→T | 11.5% | intergenic (+31/+26) | prfH → / ← pepD | pseudogene, RF‑1 domain family; probable peptide chain release factor/aminoacyl‑histidine dipeptidase (peptidase D) |
| RA | 254,238 | A→T | 11.1% | intergenic (+36/+21) | prfH → / ← pepD | pseudogene, RF‑1 domain family; probable peptide chain release factor/aminoacyl‑histidine dipeptidase (peptidase D) |
| MC JC | 257,908 | Δ776 bp | 100% | [crl] | [crl] | |
| RA | 262,225 | G→T | 10.5% | V241V (GTG→GTT) | proA → | gamma‑glutamylphosphate reductase |
| RA | 285,197 | A→G | 5.2% | intergenic (+29/‑198) | yagF → / → yagG | CP4‑6 prophage; dehydratase family protein/CP4‑6 prophage; putative sugar transporter |
| RA | 285,199 | T→A | 5.5% | intergenic (+31/‑196) | yagF → / → yagG | CP4‑6 prophage; dehydratase family protein/CP4‑6 prophage; putative sugar transporter |
| RA | 285,202 | T→A | 6.3% | intergenic (+34/‑193) | yagF → / → yagG | CP4‑6 prophage; dehydratase family protein/CP4‑6 prophage; putative sugar transporter |
| RA | 285,204 | C→T | 5.6% | intergenic (+36/‑191) | yagF → / → yagG | CP4‑6 prophage; dehydratase family protein/CP4‑6 prophage; putative sugar transporter |
| RA | 285,882 | T→G | 5.9% | I163S (ATC→AGC) | yagG → | CP4‑6 prophage; putative sugar transporter |
| RA | 292,302 | C→G | 7.0% | intergenic (+71/+20) | yagJ → / ← yagK | CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related/CP4‑6 prophage; conserved protein |
| RA | 297,212 | C→A | 5.3% | pseudogene (7/49 nt) | ptwF → | tRNA‑OTHER |
| RA | 299,378 | A→T | 5.2% | V519V (GTT→GTA) | paoC ← | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
| RA | 304,083 | G→T | 6.3% | P34T (CCC→ACC) | ykgJ ← | UPF0153 cysteine cluster protein |
| RA | 304,085 | A→C | 6.1% | I33S (ATT→AGT) | ykgJ ← | UPF0153 cysteine cluster protein |
| RA | 304,088 | G→T | 6.5% | T32N (ACT→AAT) | ykgJ ← | UPF0153 cysteine cluster protein |
| RA | 304,090 | A→C | 6.5% | G31G (GGT→GGG) | ykgJ ← | UPF0153 cysteine cluster protein |
| RA | 312,303 | T→G | 10.1% | V64V (GTT→GTG) | ykgL → | uncharacterized protein |
| RA | 312,304 | A→T | 10.0% | I65L (ATA→TTA) ‡ | ykgL → | uncharacterized protein |
| RA | 312,306 | A→T | 10.2% | I65I (ATA→ATT) ‡ | ykgL → | uncharacterized protein |
| RA | 312,308 | A→T | 10.2% | N66I (AAC→ATC) | ykgL → | uncharacterized protein |
| RA | 314,255 | T→C | 6.7% | intergenic (‑450/‑102) | ykgP ← / → eaeH | pseudogene, oxidoreductase family/pseudogene, attaching and effacing protein homology;factor; Not classified |
| RA | 314,258 | G→A | 6.6% | intergenic (‑453/‑99) | ykgP ← / → eaeH | pseudogene, oxidoreductase family/pseudogene, attaching and effacing protein homology;factor; Not classified |
| RA | 314,573 | G→C | 5.1% | pseudogene (217/872 nt) | eaeH → | pseudogene, attaching and effacing protein homology;factor; Not classified |
| RA | 314,576 | T→G | 7.3% | pseudogene (220/872 nt) | eaeH → | pseudogene, attaching and effacing protein homology;factor; Not classified |
| RA | 314,578 | G→A | 5.3% | pseudogene (222/872 nt) | eaeH → | pseudogene, attaching and effacing protein homology;factor; Not classified |
| RA | 317,566 | G→A | 5.7% | pseudogene (128/129 nt) | ykgQ → | pseudogene, putative dehydrogenase |
| RA | 317,571 | T→C | 5.3% | intergenic (+4/+155) | ykgQ → / ← rclC | pseudogene, putative dehydrogenase/reactive chlorine species (RCS) stress resistance inner membrane protein |
| RA | 324,579 | A→G | 5.5% | intergenic (+126/+117) | ykgG → / ← ykgH | LutC family protein; putative electron transport chain YkgEFG component/putative inner membrane protein |
| RA | 324,874 | T→G | 5.7% | N164T (AAC→ACC) ‡ | ykgH ← | putative inner membrane protein |
| RA | 324,875 | T→A | 6.6% | N164Y (AAC→TAC) ‡ | ykgH ← | putative inner membrane protein |
| RA | 324,876 | C→A | 6.2% | R163S (AGG→AGT) | ykgH ← | putative inner membrane protein |
| RA | 328,375 | A→C | 5.8% | I120S (ATC→AGC) | betB ← | betaine aldehyde dehydrogenase, NAD‑dependent |
| RA | 349,760 | A→G | 5.3% | intergenic (+188/‑252) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 349,761 | A→C | 7.2% | intergenic (+189/‑251) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 349,768 | T→A | 5.9% | intergenic (+196/‑244) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 349,769 | A→T | 8.8% | intergenic (+197/‑243) | prpB → / → prpC | 2‑methylisocitrate lyase/2‑methylcitrate synthase |
| RA | 357,778 | C→T | 8.1% | intergenic (+324/+13) | codA → / ← cynR | cytosine/isoguanine deaminase/transcriptional activator of cyn operon; autorepressor |
| RA | 360,265 | C→A | 7.3% | L92I (CTT→ATT) | cynX → | putative cyanate transporter |
| RA | 361,895 | A→C | 6.0% | intergenic (‑35/+31) | lacA ← / ← lacY | thiogalactoside acetyltransferase/lactose permease |
| RA | 361,901 | T→G | 7.9% | intergenic (‑41/+25) | lacA ← / ← lacY | thiogalactoside acetyltransferase/lactose permease |
| RA | 361,902 | C→A | 6.3% | intergenic (‑42/+24) | lacA ← / ← lacY | thiogalactoside acetyltransferase/lactose permease |
| RA | 371,064 | C→G | 6.6% | A263G (GCC→GGC) | mhpB → | 2,3‑dihydroxyphenylpropionate 1,2‑dioxygenase |
| RA | 371,067 | T→A | 6.7% | I264N (ATT→AAT) | mhpB → | 2,3‑dihydroxyphenylpropionate 1,2‑dioxygenase |
| RA | 371,070 | C→G | 6.6% | A265G (GCC→GGC) | mhpB → | 2,3‑dihydroxyphenylpropionate 1,2‑dioxygenase |
| RA | 375,247 | A→T | 10.0% | intergenic (+366/‑212) | mhpE → / → mhpT | 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I/3‑hydroxyphenylpropionic transporter |
| RA | 375,248 | A→T | 6.7% | intergenic (+367/‑211) | mhpE → / → mhpT | 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I/3‑hydroxyphenylpropionic transporter |
| RA | 375,254 | T→G | 6.7% | intergenic (+373/‑205) | mhpE → / → mhpT | 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I/3‑hydroxyphenylpropionic transporter |
| RA | 375,255 | T→C | 6.4% | intergenic (+374/‑204) | mhpE → / → mhpT | 4‑hyroxy‑2‑oxovalerate/4‑hydroxy‑2‑oxopentanoic acid aldolase, class I/3‑hydroxyphenylpropionic transporter |
| RA | 383,897 | C→T | 6.4% | M13I (ATG→ATA) ‡ | yaiP ← | putative family 2 glycosyltransferase |
| RA | 383,898 | A→G | 6.6% | M13T (ATG→ACG) ‡ | yaiP ← | putative family 2 glycosyltransferase |
| RA | 394,153 | C→A | 11.6% | pseudogene (1184/1449 nt) | yaiT → | pseudogene, autotransporter family;putative structure; Not classified; interrupted by IS3; putative flagellin structural protein |
| RA | 419,748 | T→G | 5.3% | V53G (GTT→GGT) | brnQ → | branched‑chain amino acid transport system 2 carrier protein; LIV‑II transport system for Ile, Leu, and Val |
| RA | 422,537 | T→G | 6.1% | L7R (CTG→CGG) | malZ → | maltodextrin glucosidase |
| RA | 422,540 | C→A | 5.6% | P8Q (CCG→CAG) | malZ → | maltodextrin glucosidase |
| RA | 431,107 | A→T | 8.2% | intergenic (+155/+22) | yajD → / ← tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K |
| RA | 431,109 | A→T | 8.0% | intergenic (+157/+20) | yajD → / ← tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K |
| RA | 431,111 | A→T | 8.2% | intergenic (+159/+18) | yajD → / ← tsx | HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K |
| RA | 448,364 | G→T | 5.2% | I99I (ATC→ATA) | cyoC ← | cytochrome o ubiquinol oxidase subunit III |
| RA | 448,367 | A→C | 5.8% | V98V (GTT→GTG) | cyoC ← | cytochrome o ubiquinol oxidase subunit III |
| RA | 448,965 | G→A | 6.0% | H559H (CAC→CAT) ‡ | cyoB ← | cytochrome o ubiquinol oxidase subunit I |
| RA | 448,966 | T→C | 6.0% | H559R (CAC→CGC) ‡ | cyoB ← | cytochrome o ubiquinol oxidase subunit I |
| RA | 457,654 | T→A | 6.4% | Y77N (TAC→AAC) | clpX → | ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease |
| RA | 464,354 | C→A | 6.3% | intergenic (+46/‑48) | ybaV → / → fadM | putative competence‑suppressing periplasmic helix‑hairpin‑helix DNA‑binding protein/long‑chain acyl‑CoA thioesterase III |
| RA | 464,356 | A→T | 5.5% | intergenic (+48/‑46) | ybaV → / → fadM | putative competence‑suppressing periplasmic helix‑hairpin‑helix DNA‑binding protein/long‑chain acyl‑CoA thioesterase III |
| RA | 464,358 | T→G | 5.4% | intergenic (+50/‑44) | ybaV → / → fadM | putative competence‑suppressing periplasmic helix‑hairpin‑helix DNA‑binding protein/long‑chain acyl‑CoA thioesterase III |
| RA | 475,971 | C→G | 10.5% | intergenic (+20/+11) | ybaY → / ← ybaZ | outer membrane lipoprotein/excision repair protein, alkyltransferase‑like protein ATL |
| RA | 475,972 | C→G | 10.4% | intergenic (+21/+10) | ybaY → / ← ybaZ | outer membrane lipoprotein/excision repair protein, alkyltransferase‑like protein ATL |
| RA | 478,750 | C→T | 7.8% | intergenic (‑133/+31) | ylaB ← / ← ylaC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase/DUF1449 family inner membrane protein |
| RA | 478,752 | G→A | 7.6% | intergenic (‑135/+29) | ylaB ← / ← ylaC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase/DUF1449 family inner membrane protein |
| RA | 478,757 | T→C | 8.1% | intergenic (‑140/+24) | ylaB ← / ← ylaC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase/DUF1449 family inner membrane protein |
| RA | 478,759 | A→G | 8.1% | intergenic (‑142/+22) | ylaB ← / ← ylaC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase/DUF1449 family inner membrane protein |
| RA | 493,334 | G→C | 9.1% | A415P (GCG→CCG) ‡ | dnaX → | DNA polymerase III/DNA elongation factor III, tau and gamma subunits |
| RA | 493,335 | C→G | 9.3% | A415G (GCG→GGG) ‡ | dnaX → | DNA polymerase III/DNA elongation factor III, tau and gamma subunits |
| RA | 493,336 | G→C | 9.2% | A415A (GCG→GCC) ‡ | dnaX → | DNA polymerase III/DNA elongation factor III, tau and gamma subunits |
| RA | 495,026 | A→T | 7.6% | intergenic (+16/‑94) | recR → / → htpG | gap repair protein/protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase |
| RA | 495,027 | T→G | 8.0% | intergenic (+17/‑93) | recR → / → htpG | gap repair protein/protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase |
| RA | 495,028 | C→A | 7.9% | intergenic (+18/‑92) | recR → / → htpG | gap repair protein/protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase |
| RA | 495,029 | A→T | 7.7% | intergenic (+19/‑91) | recR → / → htpG | gap repair protein/protein refolding molecular co‑chaperone Hsp90, Hsp70‑dependent; heat‑shock protein; ATPase |
| RA | 501,463 | C→A | 5.3% | intergenic (+34/+99) | gsk → / ← ybaL | inosine/guanosine kinase/inner membrane putative NAD(P)‑binding transporter |
| RA | 501,469 | G→T | 5.2% | intergenic (+40/+93) | gsk → / ← ybaL | inosine/guanosine kinase/inner membrane putative NAD(P)‑binding transporter |
| RA | 501,470 | C→T | 5.3% | intergenic (+41/+92) | gsk → / ← ybaL | inosine/guanosine kinase/inner membrane putative NAD(P)‑binding transporter |
| RA | 508,795 | A→G | 7.1% | intergenic (+236/+80) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator/copper transporter |
| RA | 508,796 | A→C | 7.2% | intergenic (+237/+79) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator/copper transporter |
| RA | 508,802 | T→A | 8.7% | intergenic (+243/+73) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator/copper transporter |
| RA | 508,803 | T→A | 8.3% | intergenic (+244/+72) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator/copper transporter |
| RA | 508,809 | G→T | 6.9% | intergenic (+250/+66) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator/copper transporter |
| RA | 508,810 | C→T | 7.2% | intergenic (+251/+65) | ybaQ → / ← copA | putative DNA‑binding transcriptional regulator/copper transporter |
| RA | 514,496 | G→T | 5.1% | P122T (CCT→ACT) | ybbJ ← | inner membrane protein; stimulator of the QmcA suppressor of ftsH‑htpX |
| RA | 514,497 | C→T | 5.1% | W121* (TGG→TGA) | ybbJ ← | inner membrane protein; stimulator of the QmcA suppressor of ftsH‑htpX |
| RA | 525,739 | G→C | 7.3% | E827Q (GAG→CAG) ‡ | rhsD → | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 525,740 | A→T | 7.2% | E827V (GAG→GTG) ‡ | rhsD → | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 525,741 | G→C | 7.4% | E827D (GAG→GAC) ‡ | rhsD → | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 543,059 | T→A | 8.7% | intergenic (+26/+202) | glxK → / ← allE | glycerate kinase II/S‑ureidoglycine aminohydrolase |
| RA | 543,062 | T→A | 7.9% | intergenic (+29/+199) | glxK → / ← allE | glycerate kinase II/S‑ureidoglycine aminohydrolase |
| RA | 543,747 | T→A | 5.7% | T100T (ACA→ACT) ‡ | allE ← | S‑ureidoglycine aminohydrolase |
| RA | 543,748 | G→C | 5.7% | T100R (ACA→AGA) ‡ | allE ← | S‑ureidoglycine aminohydrolase |
| RA | 543,749 | T→A | 5.8% | T100S (ACA→TCA) ‡ | allE ← | S‑ureidoglycine aminohydrolase |
| RA | 553,885 | G→A | 6.5% | T19I (ACC→ATC) | lpxH ← | UDP‑2,3‑diacylglucosamine pyrophosphohydrolase |
| RA | 553,887 | G→C | 7.3% | I18M (ATC→ATG) ‡ | lpxH ← | UDP‑2,3‑diacylglucosamine pyrophosphohydrolase |
| RA | 553,889 | T→C | 6.4% | I18V (ATC→GTC) ‡ | lpxH ← | UDP‑2,3‑diacylglucosamine pyrophosphohydrolase |
| RA | 568,685 | T→A | 7.7% | intergenic (+38/‑217) | emrE → / → ybcK | DLP12 prophage; multidrug resistance protein/DLP12 prophage; putative recombinase |
| RA | 568,690 | T→A | 7.9% | intergenic (+43/‑212) | emrE → / → ybcK | DLP12 prophage; multidrug resistance protein/DLP12 prophage; putative recombinase |
| RA | 568,691 | T→A | 8.7% | intergenic (+44/‑211) | emrE → / → ybcK | DLP12 prophage; multidrug resistance protein/DLP12 prophage; putative recombinase |
| RA | 568,696 | T→A | 7.3% | intergenic (+49/‑206) | emrE → / → ybcK | DLP12 prophage; multidrug resistance protein/DLP12 prophage; putative recombinase |
| RA | 574,494 | A→G | 6.2% | intergenic (+155/+35) | quuD → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| RA | 574,495 | A→T | 5.7% | intergenic (+156/+34) | quuD → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| RA | 574,496 | C→T | 6.0% | intergenic (+157/+33) | quuD → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| RA | 574,504 | Δ1 bp | 5.8% | intergenic (+165/+25) | quuD → / ← nmpC | DLP12 prophage; putative antitermination protein/DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage |
| RA | 585,863 | T→C | 5.4% | intergenic (‑230/‑194) | ompT ← / → pauD | DLP12 prophage; outer membrane protease VII; outer membrane protein 3b/tRNA‑OTHER |
| RA | 585,866 | G→A | 5.4% | intergenic (‑233/‑191) | ompT ← / → pauD | DLP12 prophage; outer membrane protease VII; outer membrane protein 3b/tRNA‑OTHER |
| RA | 594,946 | C→A | 8.3% | Q166H (CAG→CAT) | cusR ← | response regulator in two‑component regulatory system with CusS |
| RA | 594,950 | T→G | 8.9% | H165P (CAT→CCT) | cusR ← | response regulator in two‑component regulatory system with CusS |
| RA | 619,410 | T→C | 8.8% | T264A (ACG→GCG) | fepC ← | ferrienterobactin ABC transporter ATPase |
| RA | 619,414 | T→G | 8.6% | G262G (GGA→GGC) ‡ | fepC ← | ferrienterobactin ABC transporter ATPase |
| RA | 619,415 | C→A | 7.7% | G262V (GGA→GTA) ‡ | fepC ← | ferrienterobactin ABC transporter ATPase |
| RA | 619,419 | G→A | 9.7% | L261F (CTC→TTC) | fepC ← | ferrienterobactin ABC transporter ATPase |
| RA | 643,511 | G→A | 6.0% | intergenic (+185/+46) | ybdR → / ← rnk | putative Zn‑dependent NAD(P)‑binding oxidoreductase/regulator of nucleoside diphosphate kinase |
| RA | 643,513 | G→T | 6.4% | intergenic (+187/+44) | ybdR → / ← rnk | putative Zn‑dependent NAD(P)‑binding oxidoreductase/regulator of nucleoside diphosphate kinase |
| RA | 643,514 | T→C | 6.0% | intergenic (+188/+43) | ybdR → / ← rnk | putative Zn‑dependent NAD(P)‑binding oxidoreductase/regulator of nucleoside diphosphate kinase |
| RA | 644,034 | T→C | 5.1% | intergenic (‑67/+163) | rnk ← / ← rna | regulator of nucleoside diphosphate kinase/ribonuclease I |
| RA | 644,038 | G→A | 5.2% | intergenic (‑71/+159) | rnk ← / ← rna | regulator of nucleoside diphosphate kinase/ribonuclease I |
| RA | 644,042 | C→T | 5.2% | intergenic (‑75/+155) | rnk ← / ← rna | regulator of nucleoside diphosphate kinase/ribonuclease I |
| RA | 657,531 | T→G | 5.9% | intergenic (+30/+24) | cspE → / ← flc | constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein/fluoride efflux channel, dual topology membrane protein |
| RA | 657,533 | A→T | 6.4% | intergenic (+32/+22) | cspE → / ← flc | constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein/fluoride efflux channel, dual topology membrane protein |
| RA | 657,535 | C→A | 5.8% | intergenic (+34/+20) | cspE → / ← flc | constitutive cold shock family transcription antitermination protein; negative regulator of cspA transcription; RNA melting protein; ssDNA‑binding protein/fluoride efflux channel, dual topology membrane protein |
| RA | 662,683 | A→T | 6.3% | intergenic (‑41/+69) | ybeD ← / ← dacA | UPF0250 family protein/D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 5) |
| RA | 662,684 | G→T | 5.7% | intergenic (‑42/+68) | ybeD ← / ← dacA | UPF0250 family protein/D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 5) |
| RA | 662,685 | A→C | 8.5% | intergenic (‑43/+67) | ybeD ← / ← dacA | UPF0250 family protein/D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 5) |
| RA | 662,686 | A→T | 7.4% | intergenic (‑44/+66) | ybeD ← / ← dacA | UPF0250 family protein/D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 5) |
| RA | 665,094 | G→C | 5.9% | P33A (CCT→GCT) | rlpA ← | septal ring protein, suppressor of prc, minor lipoprotein |
| RA | 672,143 | A→T | 5.8% | I15N (ATC→AAC) | lptE ← | LPS assembly OM complex LptDE, lipoprotein component |
| RA | 672,145 | T→A | 6.2% | L14F (TTA→TTT) ‡ | lptE ← | LPS assembly OM complex LptDE, lipoprotein component |
| RA | 672,147 | A→T | 6.1% | L14I (TTA→ATA) ‡ | lptE ← | LPS assembly OM complex LptDE, lipoprotein component |
| RA | 681,694 | A→G | 8.2% | intergenic (+31/+29) | djlC → / ← hscC | J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor |
| RA | 681,699 | T→A | 8.4% | intergenic (+36/+24) | djlC → / ← hscC | J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor |
| RA | 681,700 | T→A | 8.4% | intergenic (+37/+23) | djlC → / ← hscC | J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor |
| RA | 681,705 | C→T | 8.4% | intergenic (+42/+18) | djlC → / ← hscC | J domain‑containing HscC co‑chaperone; Hsc56/Hsp70 family chaperone Hsc62; RpoD‑binding transcription inhibitor |
| RA | 693,030 | C→A | 5.9% | V117L (GTA→TTA) | ybeZ ← | heat shock protein, putative NTPase; PhoH‑like protein |
| RA | 696,325 | G→T | 6.0% | intergenic (+49/+105) | ubiF → / ← glnX | 2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase/tRNA‑Gln |
| RA | 696,328 | A→C | 5.8% | intergenic (+52/+102) | ubiF → / ← glnX | 2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase/tRNA‑Gln |
| RA | 696,334 | G→T | 5.1% | intergenic (+58/+96) | ubiF → / ← glnX | 2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase/tRNA‑Gln |
| RA | 696,335 | C→T | 5.4% | intergenic (+59/+95) | ubiF → / ← glnX | 2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol oxygenase/tRNA‑Gln |
| RA | 699,439 | G→T | 5.4% | intergenic (‑262/+135) | asnB ← / ← umpH | asparagine synthetase B/UMP phosphatase |
| RA | 699,440 | A→C | 5.2% | intergenic (‑263/+134) | asnB ← / ← umpH | asparagine synthetase B/UMP phosphatase |
| RA | 699,446 | T→G | 5.1% | intergenic (‑269/+128) | asnB ← / ← umpH | asparagine synthetase B/UMP phosphatase |
| RA | 699,447 | T→C | 5.1% | intergenic (‑270/+127) | asnB ← / ← umpH | asparagine synthetase B/UMP phosphatase |
| RA | 710,170 | C→T | 7.5% | intergenic (+54/+30) | chiQ → / ← fur | chitosugar‑induced verified lipoprotein/ferric iron uptake regulon transcriptional repressor; autorepressor |
| RA | 710,173 | A→G | 7.4% | intergenic (+57/+27) | chiQ → / ← fur | chitosugar‑induced verified lipoprotein/ferric iron uptake regulon transcriptional repressor; autorepressor |
| RA | 721,004 | T→A | 6.6% | intergenic (+164/+52) | ybfK → / ← kdpE | uncharacterized protein/response regulator in two‑component regulatory system with KdpD |
| RA | 721,006 | T→A | 6.1% | intergenic (+166/+50) | ybfK → / ← kdpE | uncharacterized protein/response regulator in two‑component regulatory system with KdpD |
| RA | 721,009 | T→A | 6.8% | intergenic (+169/+47) | ybfK → / ← kdpE | uncharacterized protein/response regulator in two‑component regulatory system with KdpD |
| RA | 721,011 | T→A | 6.2% | intergenic (+171/+45) | ybfK → / ← kdpE | uncharacterized protein/response regulator in two‑component regulatory system with KdpD |
| RA | 729,376 | G→T | 8.0% | intergenic (+36/‑207) | ybfA → / → rhsC | DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 729,377 | A→T | 8.1% | intergenic (+37/‑206) | ybfA → / → rhsC | DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 729,378 | A→T | 8.1% | intergenic (+38/‑205) | ybfA → / → rhsC | DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 729,379 | A→C | 9.8% | intergenic (+39/‑204) | ybfA → / → rhsC | DUF2517 family protein/Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor |
| RA | 741,034 | A→G | 9.2% | intergenic (+109/+41) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 741,035 | A→C | 10.0% | intergenic (+110/+40) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 741,041 | G→T | 9.2% | intergenic (+116/+34) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 741,043 | C→G | 9.2% | intergenic (+118/+32) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 741,045 | A→C | 9.6% | intergenic (+120/+30) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 741,051 | G→T | 7.3% | intergenic (+126/+24) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 741,052 | C→T | 7.1% | intergenic (+127/+23) | phr → / ← dtpD | deoxyribodipyrimidine photolyase, FAD‑binding/dipeptide and tripeptide permease D |
| RA | 751,833 | G→C | 5.2% | R113G (CGA→GGA) | ybgQ ← | putative outer membrane protein |
| RA | 751,837 | A→C | 5.3% | S111R (AGT→AGG) | ybgQ ← | putative outer membrane protein |
| RA | 762,789 | C→A | 6.2% | intergenic (+50/‑225) | sucB → / → sucC | dihydrolipoyltranssuccinase/succinyl‑CoA synthetase, beta subunit |
| RA | 770,679 | G→T | 9.0% | intergenic (+68/‑779) | mngB → / → cydA | alpha‑mannosidase/cytochrome d terminal oxidase, subunit I |
| RA | 770,682 | A→C | 6.5% | intergenic (+71/‑776) | mngB → / → cydA | alpha‑mannosidase/cytochrome d terminal oxidase, subunit I |
| RA | 774,356 | C→G | 8.0% | P16P (CCC→CCG) | ybgE → | putative inner membrane protein in cydABX‑ybgE operon |
| RA | 774,358 | T→A | 8.3% | L17Q (CTG→CAG) | ybgE → | putative inner membrane protein in cydABX‑ybgE operon |
| RA | 774,633 | G→T | 5.8% | intergenic (+31/‑119) | ybgE → / → ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| RA | 774,634 | C→G | 5.3% | intergenic (+32/‑118) | ybgE → / → ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| RA | 774,637 | C→G | 5.4% | intergenic (+35/‑115) | ybgE → / → ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| RA | 774,638 | A→C | 5.0% | intergenic (+36/‑114) | ybgE → / → ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| RA | 774,648 | A→T | 5.4% | intergenic (+46/‑104) | ybgE → / → ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| RA | 775,613 | T→C | 5.0% | I154T (ATC→ACC) | tolQ → | membrane spanning protein in TolA‑TolQ‑TolR complex |
| RA | 775,620 | C→G | 5.0% | L156L (CTC→CTG) | tolQ → | membrane spanning protein in TolA‑TolQ‑TolR complex |
| RA | 775,627 | G→A | 5.0% | V159I (GTA→ATA) | tolQ → | membrane spanning protein in TolA‑TolQ‑TolR complex |
| RA | 779,659 | C→A | 5.1% | P21H (CCC→CAC) ‡ | ybgF → | periplasmic TolA‑binding protein |
| RA | 779,660 | C→G | 5.1% | P21P (CCC→CCG) ‡ | ybgF → | periplasmic TolA‑binding protein |
| RA | 779,661 | T→G | 5.2% | W22G (TGG→GGG) | ybgF → | periplasmic TolA‑binding protein |
| RA | 788,385 | G→T | 6.2% | T151T (ACC→ACA) | galM ← | aldose 1‑epimerase; type‑1 mutarotase; galactose mutarotase |
| RA | 788,389 | A→C | 5.6% | L150R (CTG→CGG) | galM ← | aldose 1‑epimerase; type‑1 mutarotase; galactose mutarotase |
| RA | 793,331 | T→G | 6.0% | E153A (GAG→GCG) | modF ← | molybdate ABC transporter ATPase |
| RA | 793,333 | C→T | 5.9% | S152S (TCG→TCA) | modF ← | molybdate ABC transporter ATPase |
| RA | 793,336 | C→T | 6.8% | M151I (ATG→ATA) ‡ | modF ← | molybdate ABC transporter ATPase |
| RA | 793,337 | A→G | 5.8% | M151T (ATG→ACG) ‡ | modF ← | molybdate ABC transporter ATPase |
| RA | 793,340 | A→G | 5.8% | L150P (CTG→CCG) | modF ← | molybdate ABC transporter ATPase |
| RA | 793,342 | C→A | 6.7% | A149A (GCG→GCT) | modF ← | molybdate ABC transporter ATPase |
| RA | 794,938 | C→A | 5.9% | intergenic (+16/‑151) | acrZ → / → modA | AcrAB‑TolC efflux pump accessory protein, membrane‑associated/molybdate ABC transporter periplasmic binding protein; chlorate resistance protein |
| RA | 794,939 | T→C | 5.7% | intergenic (+17/‑150) | acrZ → / → modA | AcrAB‑TolC efflux pump accessory protein, membrane‑associated/molybdate ABC transporter periplasmic binding protein; chlorate resistance protein |
| RA | 794,942 | G→A | 5.4% | intergenic (+20/‑147) | acrZ → / → modA | AcrAB‑TolC efflux pump accessory protein, membrane‑associated/molybdate ABC transporter periplasmic binding protein; chlorate resistance protein |
| RA | 794,943 | T→G | 6.1% | intergenic (+21/‑146) | acrZ → / → modA | AcrAB‑TolC efflux pump accessory protein, membrane‑associated/molybdate ABC transporter periplasmic binding protein; chlorate resistance protein |
| RA | 824,572 | T→A | 5.2% | intergenic (‑75/‑58) | ybhP ← / → ybhQ | endo/exonuclease/phosphatase family protein/inner membrane protein |
| RA | 824,573 | T→A | 5.2% | intergenic (‑76/‑57) | ybhP ← / → ybhQ | endo/exonuclease/phosphatase family protein/inner membrane protein |
| RA | 824,949 | T→C | 5.4% | L107P (CTG→CCG) | ybhQ → | inner membrane protein |
| RA | 824,955 | T→G | 6.1% | I109S (ATC→AGC) ‡ | ybhQ → | inner membrane protein |
| RA | 824,956 | C→G | 5.8% | I109M (ATC→ATG) ‡ | ybhQ → | inner membrane protein |
| RA | 824,957 | C→A | 5.4% | L110I (CTT→ATT) | ybhQ → | inner membrane protein |
| RA | 832,365 | A→C | 9.8% | intergenic (+129/+103) | rhlE → / ← ybiA | ATP‑dependent RNA helicase/DUF1768 family protein |
| RA | 832,371 | T→A | 7.7% | intergenic (+135/+97) | rhlE → / ← ybiA | ATP‑dependent RNA helicase/DUF1768 family protein |
| RA | 838,985 | A→T | 9.9% | L75M (TTG→ATG) | ybiX ← | Fe(II)‑dependent oxygenase superfamily protein |
| RA | 845,575 | G→A | 5.6% | intergenic (‑95/+166) | ybiO ← / ← glnQ | mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit |
| RA | 845,576 | G→C | 6.3% | intergenic (‑96/+165) | ybiO ← / ← glnQ | mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit |
| RA | 845,577 | G→C | 5.5% | intergenic (‑97/+164) | ybiO ← / ← glnQ | mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit |
| RA | 845,578 | T→C | 5.7% | intergenic (‑98/+163) | ybiO ← / ← glnQ | mechanosensitive channel protein, intermediate conductance/glutamine transporter subunit |
| RA | 847,213 | A→T | 8.2% | intergenic (‑94/+45) | glnP ← / ← glnH | glutamine transporter subunit/glutamine transporter subunit |
| RA | 847,214 | T→A | 8.1% | intergenic (‑95/+44) | glnP ← / ← glnH | glutamine transporter subunit/glutamine transporter subunit |
| RA | 847,215 | A→T | 8.4% | intergenic (‑96/+43) | glnP ← / ← glnH | glutamine transporter subunit/glutamine transporter subunit |
| RA | 850,993 | T→C | 7.0% | intergenic (+28/+21) | ompX → / ← opgE | outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase |
| RA | 850,995 | T→G | 7.0% | intergenic (+30/+19) | ompX → / ← opgE | outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase |
| RA | 850,996 | C→A | 7.0% | intergenic (+31/+18) | ompX → / ← opgE | outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase |
| RA | 850,998 | G→A | 6.9% | intergenic (+33/+16) | ompX → / ← opgE | outer membrane protein X/OPG biosynthetic transmembrane phosphoethanolamine transferase |
| RA | 852,857 | A→C | 7.1% | intergenic (‑260/+12) | opgE ← / ← mntS | OPG biosynthetic transmembrane phosphoethanolamine transferase/Mn(2)‑response protein, MntR‑repressed |
| RA | 852,858 | C→G | 7.1% | intergenic (‑261/+11) | opgE ← / ← mntS | OPG biosynthetic transmembrane phosphoethanolamine transferase/Mn(2)‑response protein, MntR‑repressed |
| RA | 852,861 | C→G | 7.4% | intergenic (‑264/+8) | opgE ← / ← mntS | OPG biosynthetic transmembrane phosphoethanolamine transferase/Mn(2)‑response protein, MntR‑repressed |
| RA | 852,862 | G→T | 7.4% | intergenic (‑265/+7) | opgE ← / ← mntS | OPG biosynthetic transmembrane phosphoethanolamine transferase/Mn(2)‑response protein, MntR‑repressed |
| RA | 857,576 | T→C | 8.7% | intergenic (+21/+220) | ybiT → / ← ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| RA | 857,578 | C→G | 8.6% | intergenic (+23/+218) | ybiT → / ← ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| RA | 857,580 | G→A | 8.1% | intergenic (+25/+216) | ybiT → / ← ybiU | ABC‑F family putative regulatory ATPase/DUF1479 family protein |
| RA | 869,378 | T→G | 6.5% | F620C (TTC→TGC) ‡ | gsiA → | glutathione ABC transporter ATPase |
| RA | 869,379 | C→A | 6.5% | F620L (TTC→TTA) ‡ | gsiA → | glutathione ABC transporter ATPase |
| RA | 869,724 | A→C | 7.9% | N105T (AAC→ACC) | gsiB → | glutathione ABC transporter periplasmic binding protein |
| RA | 875,393 | C→A | 15.0% | S20* (TCA→TAA) | yliF → | putative membrane‑anchored diguanylate cyclase |
| RA | 884,402 | A→G | 5.3% | I244V (ATT→GTT) ‡ | mdfA → | multidrug efflux system protein |
| RA | 884,404 | T→A | 5.7% | I244I (ATT→ATA) ‡ | mdfA → | multidrug efflux system protein |
| RA | 884,407 | C→G | 6.5% | I245M (ATC→ATG) | mdfA → | multidrug efflux system protein |
| RA | 884,410 | C→G | 5.4% | I246M (ATC→ATG) | mdfA → | multidrug efflux system protein |
| RA | 892,020 | G→T | 6.5% | L18L (CTG→CTT) | rimK → | ribosomal protein S6 modification protein |
| RA | 892,022 | G→A | 6.7% | R19H (CGT→CAT) ‡ | rimK → | ribosomal protein S6 modification protein |
| RA | 892,023 | T→C | 6.5% | R19R (CGT→CGC) ‡ | rimK → | ribosomal protein S6 modification protein |
| RA | 892,025 | A→C | 6.6% | E20A (GAA→GCA) | rimK → | ribosomal protein S6 modification protein |
| RA | 897,968:1 | +A | 6.2% | intergenic (+39/‑21) | potI → / → ybjO | putrescine ABC transporter permease/DUF2593 family inner membrane protein |
| RA | 897,973 | Δ1 bp | 5.7% | intergenic (+44/‑16) | potI → / → ybjO | putrescine ABC transporter permease/DUF2593 family inner membrane protein |
| RA | 900,201 | T→G | 6.3% | K125N (AAA→AAC) ‡ | artJ ← | arginine ABC transporter periplasmic binding protein |
| RA | 900,202 | T→A | 6.2% | K125I (AAA→ATA) ‡ | artJ ← | arginine ABC transporter periplasmic binding protein |
| RA | 900,205 | A→T | 6.5% | L124Q (CTG→CAG) | artJ ← | arginine ABC transporter periplasmic binding protein |
| RA | 900,208 | T→A | 6.6% | D123V (GAT→GTT) ‡ | artJ ← | arginine ABC transporter periplasmic binding protein |
| RA | 900,209 | C→A | 6.6% | D123Y (GAT→TAT) ‡ | artJ ← | arginine ABC transporter periplasmic binding protein |
| RA | 912,583 | T→A | 6.9% | E411V (GAG→GTG) | hcp ← | hybrid‑cluster [4Fe‑2S‑2O] subunit of anaerobic terminal reductases |
| RA | 912,587 | C→G | 7.4% | G410R (GGC→CGC) | hcp ← | hybrid‑cluster [4Fe‑2S‑2O] subunit of anaerobic terminal reductases |
| RA | 912,591 | T→A | 6.9% | A408A (GCA→GCT) | hcp ← | hybrid‑cluster [4Fe‑2S‑2O] subunit of anaerobic terminal reductases |
| RA | 915,080 | G→C | 5.6% | intergenic (‑223/+272) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| RA | 915,081 | G→C | 5.4% | intergenic (‑224/+271) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| RA | 922,314:1 | +C | 11.7% | intergenic (+21/+52) | macB → / ← cspD | macrolide ABC transporter peremase/ATPase/inhibitor of DNA replication, cold shock protein homolog |
| RA | 933,155 | T→C | 7.6% | intergenic (+66/‑69) | lrp → / → ftsK | leucine‑responsive global transcriptional regulator/DNA translocase at septal ring sorting daughter chromsomes |
| RA | 933,156 | G→A | 8.0% | intergenic (+67/‑68) | lrp → / → ftsK | leucine‑responsive global transcriptional regulator/DNA translocase at septal ring sorting daughter chromsomes |
| RA | 933,159 | G→T | 7.9% | intergenic (+70/‑65) | lrp → / → ftsK | leucine‑responsive global transcriptional regulator/DNA translocase at septal ring sorting daughter chromsomes |
| RA | 933,162 | A→C | 8.4% | intergenic (+73/‑62) | lrp → / → ftsK | leucine‑responsive global transcriptional regulator/DNA translocase at septal ring sorting daughter chromsomes |
| RA | 933,165 | T→C | 7.5% | intergenic (+76/‑59) | lrp → / → ftsK | leucine‑responsive global transcriptional regulator/DNA translocase at septal ring sorting daughter chromsomes |
| RA | 933,166 | G→A | 7.7% | intergenic (+77/‑58) | lrp → / → ftsK | leucine‑responsive global transcriptional regulator/DNA translocase at septal ring sorting daughter chromsomes |
| RA | 940,751 | T→C | 9.8% | intergenic (+31/‑208) | serS → / → dmsA | seryl‑tRNA synthetase/dimethyl sulfoxide reductase, anaerobic, subunit A |
| RA | 940,754 | G→A | 10.0% | intergenic (+34/‑205) | serS → / → dmsA | seryl‑tRNA synthetase/dimethyl sulfoxide reductase, anaerobic, subunit A |
| RA | 951,219 | T→A | 5.6% | intergenic (‑139/+53) | pflA ← / ← pflB | pyruvate formate‑lyase 1‑activating enzyme; [formate‑C‑acetyltransferase 1]‑activating enzyme; PFL activase/formate C‑acetyltransferase 1, anaerobic; pyruvate formate‑lyase 1 |
| RA | 958,769 | C→G | 6.4% | intergenic (+28/‑43) | serC → / → aroA | 3‑phosphoserine/phosphohydroxythreonine aminotransferase/5‑enolpyruvylshikimate‑3‑phosphate synthetase |
| RA | 958,771 | A→T | 6.5% | intergenic (+30/‑41) | serC → / → aroA | 3‑phosphoserine/phosphohydroxythreonine aminotransferase/5‑enolpyruvylshikimate‑3‑phosphate synthetase |
| RA | 958,773 | C→G | 5.7% | intergenic (+32/‑39) | serC → / → aroA | 3‑phosphoserine/phosphohydroxythreonine aminotransferase/5‑enolpyruvylshikimate‑3‑phosphate synthetase |
| RA | 963,761 | T→C | 8.7% | intergenic (+93/‑67) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor (IHF), DNA‑binding protein, beta subunit |
| RA | 963,762 | A→G | 8.7% | intergenic (+94/‑66) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor (IHF), DNA‑binding protein, beta subunit |
| RA | 963,763 | C→T | 8.6% | intergenic (+95/‑65) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor (IHF), DNA‑binding protein, beta subunit |
| RA | 963,764 | G→A | 8.6% | intergenic (+96/‑64) | rpsA → / → ihfB | 30S ribosomal subunit protein S1/integration host factor (IHF), DNA‑binding protein, beta subunit |
| RA | 975,700 | G→T | 5.8% | D27Y (GAC→TAC) ‡ | mukE → | chromosome condensin MukBEF, MukE localization factor |
| RA | 975,701 | A→C | 6.2% | D27A (GAC→GCC) ‡ | mukE → | chromosome condensin MukBEF, MukE localization factor |
| RA | 986,050 | A→T | 7.1% | V311V (GTT→GTA) | ompF ← | outer membrane porin 1a (Ia;b;F) |
| RA | 987,418 | A→T | 5.6% | intergenic (‑436/+167) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 987,420 | A→C | 5.5% | intergenic (‑438/+165) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 987,421 | A→T | 5.1% | intergenic (‑439/+164) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 987,422 | G→T | 5.2% | intergenic (‑440/+163) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 987,424 | A→T | 6.1% | intergenic (‑442/+161) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 987,560 | G→C | 7.4% | intergenic (‑578/+25) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 987,561 | G→C | 7.5% | intergenic (‑579/+24) | ompF ← / ← asnS | outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase |
| RA | 993,254 | A→G | 11.7% | intergenic (+20/+23) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATPase |
| RA | 993,255 | A→C | 11.2% | intergenic (+21/+22) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATPase |
| RA | 993,258 | G→T | 11.5% | intergenic (+24/+19) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATPase |
| RA | 993,259 | C→T | 12.0% | intergenic (+25/+18) | pepN → / ← ssuB | aminopeptidase N/aliphatic sulfonate ABC transporter ATPase |
| RA | 1,015,912 | T→A | 7.6% | intergenic (+30/+40) | rmf → / ← fabA | ribosome modulation factor/beta‑hydroxydecanoyl thioester dehydrase |
| RA | 1,021,922 | A→C | 5.6% | P654P (CCT→CCG) | yccS ← | putative transporter, FUSC superfamily inner membrane protein |
| RA | 1,026,538 | G→A | 9.0% | intergenic (+13/+19) | helD → / ← mgsA | DNA helicase IV/methylglyoxal synthase |
| RA | 1,026,539 | T→A | 10.2% | intergenic (+14/+18) | helD → / ← mgsA | DNA helicase IV/methylglyoxal synthase |
| RA | 1,026,540 | T→A | 9.2% | intergenic (+15/+17) | helD → / ← mgsA | DNA helicase IV/methylglyoxal synthase |
| RA | 1,026,541 | T→C | 9.2% | intergenic (+16/+16) | helD → / ← mgsA | DNA helicase IV/methylglyoxal synthase |
| RA | 1,052,257 | C→T | 9.6% | intergenic (+17/+32) | gnsA → / ← yccM | putative phosphatidylethanolamine synthesis regulator/putative 4Fe‑4S membrane protein |
| RA | 1,052,260 | T→C | 9.4% | intergenic (+20/+29) | gnsA → / ← yccM | putative phosphatidylethanolamine synthesis regulator/putative 4Fe‑4S membrane protein |
| RA | 1,052,261 | G→A | 9.4% | intergenic (+21/+28) | gnsA → / ← yccM | putative phosphatidylethanolamine synthesis regulator/putative 4Fe‑4S membrane protein |
| RA | 1,052,264 | A→G | 9.7% | intergenic (+24/+25) | gnsA → / ← yccM | putative phosphatidylethanolamine synthesis regulator/putative 4Fe‑4S membrane protein |
| RA | 1,064,160 | T→C | 6.9% | L42P (CTG→CCG) ‡ | yccE → | uncharacterized protein |
| RA | 1,064,161 | G→A | 7.0% | L42L (CTG→CTA) ‡ | yccE → | uncharacterized protein |
| RA | 1,068,436 | T→A | 5.1% | intergenic (+182/+75) | ymdF → / ← rutG | KGG family protein/pyrimidine permease |
| RA | 1,068,437 | T→A | 5.1% | intergenic (+183/+74) | ymdF → / ← rutG | KGG family protein/pyrimidine permease |
| RA | 1,070,882 | T→A | 6.9% | E25V (GAG→GTG) | rutE ← | putative malonic semialdehyde reductase |
| RA | 1,100,789 | G→T | 7.2% | intergenic (+2/+62) | ycdZ → / ← csgG | DUF1097 family inner membrane protein/curli production assembly/transport outer membrane lipoprotein |
| RA | 1,100,791 | G→C | 8.0% | intergenic (+4/+60) | ycdZ → / ← csgG | DUF1097 family inner membrane protein/curli production assembly/transport outer membrane lipoprotein |
| RA | 1,100,793 | A→C | 7.3% | intergenic (+6/+58) | ycdZ → / ← csgG | DUF1097 family inner membrane protein/curli production assembly/transport outer membrane lipoprotein |
| RA | 1,107,660 | T→C | 5.8% | W436R (TGG→CGG) ‡ | clsC → | stationary phase cardiolipin synthase 3 |
| RA | 1,107,661 | G→C | 6.5% | W436S (TGG→TCG) ‡ | clsC → | stationary phase cardiolipin synthase 3 |
| RA | 1,107,662 | G→A | 5.8% | W436* (TGG→TGA) ‡ | clsC → | stationary phase cardiolipin synthase 3 |
| RA | 1,113,544 | G→A | 7.6% | intergenic (+138/‑35) | opgH → / → yceK | OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein |
| RA | 1,113,546 | T→A | 7.8% | intergenic (+140/‑33) | opgH → / → yceK | OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein |
| RA | 1,113,548 | T→C | 7.7% | intergenic (+142/‑31) | opgH → / → yceK | OPG biosynthetic ACP‑dependent transmembrane UDP‑glucose beta‑1,2 glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist/outer membrane integrity lipoprotein |
| RA | 1,129,394 | G→C | 6.1% | intergenic (+20/+20) | murJ → / ← flgN | putative lipid II flippase/export chaperone for FlgK and FlgL |
| RA | 1,136,027 | T→A | 5.6% | V155E (GTA→GAA) ‡ | flgH → | flagellar protein of basal‑body outer‑membrane L ring |
| RA | 1,136,028 | A→C | 5.2% | V155V (GTA→GTC) ‡ | flgH → | flagellar protein of basal‑body outer‑membrane L ring |
| RA | 1,141,148 | C→T | 6.5% | intergenic (+162/+34) | flgL → / ← rne | flagellar hook‑filament junction protein/endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| RA | 1,141,150 | G→A | 6.0% | intergenic (+164/+32) | flgL → / ← rne | flagellar hook‑filament junction protein/endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| RA | 1,141,151 | T→C | 6.8% | intergenic (+165/+31) | flgL → / ← rne | flagellar hook‑filament junction protein/endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| RA | 1,141,153 | A→G | 6.7% | intergenic (+167/+29) | flgL → / ← rne | flagellar hook‑filament junction protein/endoribonuclease; RNA‑binding protein;RNA degradosome binding protein |
| RA | 1,146,736 | A→G | 5.3% | noncoding (148/169 nt) | psrD → | novel Novel sRNA, function unknown |
| RA | 1,146,739 | A→T | 5.5% | noncoding (151/169 nt) | psrD → | novel Novel sRNA, function unknown |
| RA | 1,147,548 | T→G | 8.8% | intergenic (+8/‑73) | rpmF → / → plsX | 50S ribosomal subunit protein L32/putative phosphate acyltransferase |
| RA | 1,147,549 | C→A | 8.0% | intergenic (+9/‑72) | rpmF → / → plsX | 50S ribosomal subunit protein L32/putative phosphate acyltransferase |
| RA | 1,147,690 | G→A | 5.1% | A24T (GCA→ACA) ‡ | plsX → | putative phosphate acyltransferase |
| RA | 1,147,691 | C→T | 5.1% | A24V (GCA→GTA) ‡ | plsX → | putative phosphate acyltransferase |
| RA | 1,147,692 | A→G | 5.1% | A24A (GCA→GCG) ‡ | plsX → | putative phosphate acyltransferase |
| RA | 1,147,693 | T→C | 5.0% | L25L (TTG→CTG) | plsX → | putative phosphate acyltransferase |
| RA | 1,150,471 | A→G | 5.1% | V248V (GTA→GTG) | fabD → | malonyl‑CoA‑[acyl‑carrier‑protein] transacylase |
| RA | 1,153,208 | T→C | 5.7% | intergenic (+28/‑92) | fabF → / → pabC | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase II/4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex |
| RA | 1,153,213 | T→A | 5.6% | intergenic (+33/‑87) | fabF → / → pabC | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase II/4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex |
| RA | 1,153,214 | T→A | 5.4% | intergenic (+34/‑86) | fabF → / → pabC | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase II/4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex |
| RA | 1,153,219 | G→A | 5.5% | intergenic (+39/‑81) | fabF → / → pabC | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase II/4‑amino‑4‑deoxychorismate lyase component of para‑aminobenzoate synthase multienzyme complex |
| RA | 1,157,629 | G→C | 10.3% | intergenic (+55/‑240) | ycfH → / → ptsG | putative DNase/fused glucose‑specific PTS enzymes: IIB component/IIC component |
| RA | 1,157,632 | A→T | 9.8% | intergenic (+58/‑237) | ycfH → / → ptsG | putative DNase/fused glucose‑specific PTS enzymes: IIB component/IIC component |
| RA | 1,157,633 | A→T | 11.5% | intergenic (+59/‑236) | ycfH → / → ptsG | putative DNase/fused glucose‑specific PTS enzymes: IIB component/IIC component |
| RA | 1,157,636 | G→C | 10.1% | intergenic (+62/‑233) | ycfH → / → ptsG | putative DNase/fused glucose‑specific PTS enzymes: IIB component/IIC component |
| RA | 1,165,757 | C→G | 5.1% | intergenic (+72/‑328) | ycfP → / → ndh | putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase |
| RA | 1,165,758 | C→G | 5.4% | intergenic (+73/‑327) | ycfP → / → ndh | putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase |
| RA | 1,174,501 | A→T | 6.9% | L222Q (CTG→CAG) | ycfT ← | inner membrane protein |
| RA | 1,174,504 | A→T | 6.7% | L221Q (CTG→CAG) | ycfT ← | inner membrane protein |
| RA | 1,187,090 | G→C | 7.2% | intergenic (+20/+29) | pepT → / ← roxA | peptidase T/50S ribosomal protein L16 arginine hydroxylase; 2‑oxoglutarate oxygenase |
| RA | 1,187,091 | T→A | 6.3% | intergenic (+21/+28) | pepT → / ← roxA | peptidase T/50S ribosomal protein L16 arginine hydroxylase; 2‑oxoglutarate oxygenase |
| RA | 1,187,092 | G→C | 6.7% | intergenic (+22/+27) | pepT → / ← roxA | peptidase T/50S ribosomal protein L16 arginine hydroxylase; 2‑oxoglutarate oxygenase |
| RA | 1,194,645:1 | +A | 6.7% | coding (307/654 nt) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,194,650 | G→A | 8.3% | P101L (CCG→CTG) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,194,653 | T→C | 8.2% | Q100R (CAG→CGG) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,194,657 | Δ1 bp | 8.3% | coding (295/654 nt) | rluE ← | 23S rRNA pseudouridine(2457) synthase |
| RA | 1,196,803 | A→C | 5.9% | intergenic (+430/+64) | icd → / ← ymfD | isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase/e14 prophage; putative SAM‑dependent methyltransferase |
| RA | 1,196,804 | G→T | 5.2% | intergenic (+431/+63) | icd → / ← ymfD | isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase/e14 prophage; putative SAM‑dependent methyltransferase |
| RA | 1,200,910 | T→A | 5.7% | Q41H (CAA→CAT) | xisE ← | e14 prophage; putative excisionase |
| RA | 1,200,913 | T→A | 5.3% | K40N (AAA→AAT) ‡ | xisE ← | e14 prophage; putative excisionase |
| RA | 1,200,914 | T→A | 6.4% | K40I (AAA→ATA) ‡ | xisE ← | e14 prophage; putative excisionase |
| RA | 1,200,915 | T→A | 5.6% | K40* (AAA→TAA) ‡ | xisE ← | e14 prophage; putative excisionase |
| RA | 1,208,927 | A→T | 5.2% | S65T (TCT→ACT) | tfaE ← | e14 prophage; putative tail fiber assembly protein |
| RA | 1,208,930 | G→T | 5.3% | R64S (CGT→AGT) | tfaE ← | e14 prophage; putative tail fiber assembly protein |
| RA | 1,212,470 | A→C | 5.2% | intergenic (‑467/+233) | iraM ← / ← ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein |
| RA | 1,212,475 | T→C | 5.5% | intergenic (‑472/+228) | iraM ← / ← ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein |
| RA | 1,212,476 | G→C | 5.5% | intergenic (‑473/+227) | iraM ← / ← ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein |
| RA | 1,212,477 | G→A | 5.4% | intergenic (‑474/+226) | iraM ← / ← ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein |
| RA | 1,212,482 | G→T | 5.6% | intergenic (‑479/+221) | iraM ← / ← ycgX | RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein |
| RA | 1,214,515 | G→T | 5.0% | Q321K (CAG→AAG) | bluF ← | anti‑repressor for YcgE, blue light‑responsive; FAD‑binding; inactive c‑di‑GMP phosphodiesterase‑like EAL domain protein |
| RA | 1,214,521 | G→C | 5.0% | R319G (CGC→GGC) | bluF ← | anti‑repressor for YcgE, blue light‑responsive; FAD‑binding; inactive c‑di‑GMP phosphodiesterase‑like EAL domain protein |
| RA | 1,226,114 | C→G | 6.2% | intergenic (‑34/‑486) | minC ← / → ycgJ | inhibitor of FtsZ ring polymerization/uncharacterized protein |
| RA | 1,226,115 | A→C | 6.7% | intergenic (‑35/‑485) | minC ← / → ycgJ | inhibitor of FtsZ ring polymerization/uncharacterized protein |
| RA | 1,226,118 | G→T | 6.2% | intergenic (‑38/‑482) | minC ← / → ycgJ | inhibitor of FtsZ ring polymerization/uncharacterized protein |
| RA | 1,226,119 | C→G | 6.3% | intergenic (‑39/‑481) | minC ← / → ycgJ | inhibitor of FtsZ ring polymerization/uncharacterized protein |
| RA | 1,232,481 | C→T | 9.6% | intergenic (+27/+19) | umuC → / ← dsbB | translesion error‑prone DNA polymerase V subunit; DNA polymerase activity/oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I |
| RA | 1,232,484 | A→G | 9.8% | intergenic (+30/+16) | umuC → / ← dsbB | translesion error‑prone DNA polymerase V subunit; DNA polymerase activity/oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I |
| RA | 1,233,154 | T→A | 10.6% | intergenic (‑124/+22) | dsbB ← / ← nhaB | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I/sodium:proton antiporter |
| RA | 1,233,157 | T→A | 10.6% | intergenic (‑127/+19) | dsbB ← / ← nhaB | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I/sodium:proton antiporter |
| RA | 1,235,686 | A→G | 7.9% | intergenic (+29/+23) | fadR → / ← ycgB | fatty acid metabolism regulon transcriptional regulator/SpoVR family stationary phase protein |
| RA | 1,235,687 | A→T | 7.8% | intergenic (+30/+22) | fadR → / ← ycgB | fatty acid metabolism regulon transcriptional regulator/SpoVR family stationary phase protein |
| RA | 1,235,688 | A→T | 7.9% | intergenic (+31/+21) | fadR → / ← ycgB | fatty acid metabolism regulon transcriptional regulator/SpoVR family stationary phase protein |
| RA | 1,235,689 | C→T | 7.8% | intergenic (+32/+20) | fadR → / ← ycgB | fatty acid metabolism regulon transcriptional regulator/SpoVR family stationary phase protein |
| RA | 1,248,561 | G→A | 12.1% | A185V (GCC→GTC) | dhaM ← | putative dihydroxyacetone‑specific PTS enzymes: HPr, EI components |
| RA | 1,248,566 | A→T | 6.7% | F183L (TTT→TTA) | dhaM ← | putative dihydroxyacetone‑specific PTS enzymes: HPr, EI components |
| RA | 1,248,571 | T→C | 6.1% | T182A (ACA→GCA) | dhaM ← | putative dihydroxyacetone‑specific PTS enzymes: HPr, EI components |
| RA | 1,287,152 | T→C | 10.6% | noncoding (85/171 nt) T9A (ACT→GCT) |
rttR ← tpr ← |
rtT sRNA, processed from tyrT transcript protamine‑like protein |
| RA | 1,287,161 | G→A | 9.1% | noncoding (76/171 nt) Q6* (CAA→TAA) |
rttR ← tpr ← |
rtT sRNA, processed from tyrT transcript protamine‑like protein |
| RA | 1,292,472 | G→A | 6.7% | intergenic (+107/+37) | galU → / ← hns | glucose‑1‑phosphate uridylyltransferase/global DNA‑binding transcriptional dual regulator H‑NS |
| RA | 1,292,473 | C→G | 7.1% | intergenic (+108/+36) | galU → / ← hns | glucose‑1‑phosphate uridylyltransferase/global DNA‑binding transcriptional dual regulator H‑NS |
| RA | 1,292,474 | T→C | 6.6% | intergenic (+109/+35) | galU → / ← hns | glucose‑1‑phosphate uridylyltransferase/global DNA‑binding transcriptional dual regulator H‑NS |
| RA | 1,299,267:1 | +A | 5.8% | intergenic (+22/‑1915) | ychE → / → oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,299,270 | C→G | 5.7% | intergenic (+25/‑1912) | ychE → / → oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,299,273 | Δ1 bp | 5.7% | intergenic (+28/‑1909) | ychE → / → oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein |
| RA | 1,303,657 | T→A | 6.3% | I253I (ATT→ATA) | oppB → | oligopeptide ABC transporter permease |
| RA | 1,303,658 | T→A | 5.5% | Y254N (TAT→AAT) | oppB → | oligopeptide ABC transporter permease |
| RA | 1,311,830 | A→G | 7.5% | intergenic (+22/+18) | tonB → / ← yciA | membrane spanning protein in TonB‑ExbB‑ExbD transport complex/acyl‑CoA esterase |
| RA | 1,311,831 | C→T | 7.4% | intergenic (+23/+17) | tonB → / ← yciA | membrane spanning protein in TonB‑ExbB‑ExbD transport complex/acyl‑CoA esterase |
| RA | 1,315,477 | A→C | 6.9% | R98R (CGT→CGG) | yciF ← | putative rubrerythrin/ferritin‑like metal‑binding protein |
| RA | 1,315,796 | A→G | 7.1% | intergenic (‑26/+60) | yciF ← / ← yciG | putative rubrerythrin/ferritin‑like metal‑binding protein/KGG family protein |
| RA | 1,315,800 | A→G | 7.1% | intergenic (‑30/+56) | yciF ← / ← yciG | putative rubrerythrin/ferritin‑like metal‑binding protein/KGG family protein |
| RA | 1,315,803 | C→T | 7.1% | intergenic (‑33/+53) | yciF ← / ← yciG | putative rubrerythrin/ferritin‑like metal‑binding protein/KGG family protein |
| RA | 1,315,807 | C→T | 7.4% | intergenic (‑37/+49) | yciF ← / ← yciG | putative rubrerythrin/ferritin‑like metal‑binding protein/KGG family protein |
| RA | 1,324,837 | A→C | 11.0% | Y31S (TAT→TCT) ‡ | yciQ → | enhancer of membrane protein expression; putative inner membrane protein |
| RA | 1,324,838 | T→A | 11.5% | Y31* (TAT→TAA) ‡ | yciQ → | enhancer of membrane protein expression; putative inner membrane protein |
| RA | 1,324,839 | G→T | 11.2% | E32* (GAA→TAA) | yciQ → | enhancer of membrane protein expression; putative inner membrane protein |
| RA | 1,330,396:1 | +T | 7.0% | intergenic (+15/+21) | sohB → / ← yciN | inner membrane protein, S49 peptidase family protein/DUF2498 protein YciN |
| RA | 1,330,399 | A→T | 6.9% | intergenic (+18/+18) | sohB → / ← yciN | inner membrane protein, S49 peptidase family protein/DUF2498 protein YciN |
| RA | 1,330,402 | Δ1 bp | 7.1% | intergenic (+21/+15) | sohB → / ← yciN | inner membrane protein, S49 peptidase family protein/DUF2498 protein YciN |
| RA | 1,344,033 | A→G | 7.9% | L105P (CTG→CCG) | yciT ← | global regulator of transcription; DeoR family |
| RA | 1,344,036 | G→C | 7.7% | T104S (ACT→AGT) | yciT ← | global regulator of transcription; DeoR family |
| RA | 1,344,039 | C→T | 7.8% | R103Q (CGG→CAG) | yciT ← | global regulator of transcription; DeoR family |
| RA | 1,354,223 | A→G | 5.6% | V99A (GTG→GCG) ‡ | sapC ← | antimicrobial peptide transport ABC transporter permease |
| RA | 1,354,224 | C→T | 5.4% | V99M (GTG→ATG) ‡ | sapC ← | antimicrobial peptide transport ABC transporter permease |
| RA | 1,354,227 | T→G | 6.4% | T98P (ACC→CCC) | sapC ← | antimicrobial peptide transport ABC transporter permease |
| RA | 1,357,224 | G→A | 6.3% | intergenic (‑114/+199) | sapA ← / ← ymjA | antimicrobial peptide transport ABC transporter periplasmic binding protein/DUF2543 family protein |
| RA | 1,357,227 | A→G | 5.3% | intergenic (‑117/+196) | sapA ← / ← ymjA | antimicrobial peptide transport ABC transporter periplasmic binding protein/DUF2543 family protein |
| RA | 1,357,230 | T→A | 5.4% | intergenic (‑120/+193) | sapA ← / ← ymjA | antimicrobial peptide transport ABC transporter periplasmic binding protein/DUF2543 family protein |
| RA | 1,357,233 | C→T | 5.3% | intergenic (‑123/+190) | sapA ← / ← ymjA | antimicrobial peptide transport ABC transporter periplasmic binding protein/DUF2543 family protein |
| RA | 1,357,236 | T→C | 5.2% | intergenic (‑126/+187) | sapA ← / ← ymjA | antimicrobial peptide transport ABC transporter periplasmic binding protein/DUF2543 family protein |
| RA | 1,367,335 | A→G | 6.7% | F193S (TTT→TCT) | pspF ← | psp operon transcriptional activator |
| RA | 1,367,337 | G→A | 6.3% | Y192Y (TAC→TAT) | pspF ← | psp operon transcriptional activator |
| RA | 1,367,340 | T→C | 6.1% | E191E (GAA→GAG) ‡ | pspF ← | psp operon transcriptional activator |
| RA | 1,367,342 | C→T | 6.2% | E191K (GAA→AAA) ‡ | pspF ← | psp operon transcriptional activator |
| RA | 1,370,026 | T→A | 7.1% | intergenic (+23/‑190) | pspE → / → ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| RA | 1,370,029 | T→A | 7.0% | intergenic (+26/‑187) | pspE → / → ycjM | thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein |
| RA | 1,376,207 | C→A | 7.0% | A58A (GCC→GCA) | ycjR → | putative TIM alpha/beta barrel enzyme |
| RA | 1,376,208 | T→G | 7.2% | C59G (TGC→GGC) | ycjR → | putative TIM alpha/beta barrel enzyme |
| RA | 1,386,750 | C→G | 7.7% | L11V (CTC→GTC) | tyrR → | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase |
| RA | 1,388,283 | C→T | 8.3% | intergenic (+22/+22) | tyrR → / ← tpx | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase/lipid hydroperoxide peroxidase |
| RA | 1,388,284 | A→T | 7.4% | intergenic (+23/+21) | tyrR → / ← tpx | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase/lipid hydroperoxide peroxidase |
| RA | 1,388,285 | A→G | 7.6% | intergenic (+24/+20) | tyrR → / ← tpx | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase/lipid hydroperoxide peroxidase |
| RA | 1,406,093 | A→G | 6.5% | I39V (ATC→GTC) | smrA → | DNA endonuclease |
| RA | 1,406,098 | C→T | 5.4% | D40D (GAC→GAT) | smrA → | DNA endonuclease |
| RA | 1,407,926 | T→A | 5.2% | intergenic (‑131/‑124) | ydaM ← / → ydaN | diguanylate cyclase, csgD regulator/putative Zn(II) transporter |
| RA | 1,408,537 | A→T | 7.8% | E163V (GAG→GTG) | ydaN → | putative Zn(II) transporter |
| RA | 1,408,546 | A→T | 7.1% | H166L (CAC→CTC) | ydaN → | putative Zn(II) transporter |
| RA | 1,409,557 | C→T | 5.5% | T16M (ACG→ATG) | dbpA → | ATP‑dependent RNA helicase, specific for 23S rRNA |
| RA | 1,409,562 | C→G | 5.5% | L18V (CTT→GTT) | dbpA → | ATP‑dependent RNA helicase, specific for 23S rRNA |
| RA | 1,413,966 | T→A | 5.4% | intergenic (‑39/+18) | ralR ← / ← recT | Rac prophage; restriction alleviation protein/Rac prophage; recombination and repair protein |
| RA | 1,426,417 | T→C | 5.7% | intergenic (+335/‑37) | ydaY → / → tmpR | pseudogene, Rac prophage;Phage or Prophage Related/Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| RA | 1,426,418 | T→G | 5.6% | intergenic (+336/‑36) | ydaY → / → tmpR | pseudogene, Rac prophage;Phage or Prophage Related/Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| RA | 1,426,421 | C→A | 5.6% | intergenic (+339/‑33) | ydaY → / → tmpR | pseudogene, Rac prophage;Phage or Prophage Related/Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| RA | 1,426,422 | G→A | 5.9% | intergenic (+340/‑32) | ydaY → / → tmpR | pseudogene, Rac prophage;Phage or Prophage Related/Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| RA | 1,441,833 | G→C | 7.4% | intergenic (‑90/+21) | hslJ ← / ← ldhA | heat‑inducible lipoprotein involved in novobiocin resistance/fermentative D‑lactate dehydrogenase, NAD‑dependent |
| RA | 1,441,835 | A→T | 7.3% | intergenic (‑92/+19) | hslJ ← / ← ldhA | heat‑inducible lipoprotein involved in novobiocin resistance/fermentative D‑lactate dehydrogenase, NAD‑dependent |
| RA | 1,441,837 | G→C | 7.5% | intergenic (‑94/+17) | hslJ ← / ← ldhA | heat‑inducible lipoprotein involved in novobiocin resistance/fermentative D‑lactate dehydrogenase, NAD‑dependent |
| RA | 1,444,036 | C→A | 12.6% | P329H (CCT→CAT) ‡ | ydbH → | putative membrane‑anchored protein, function unknown |
| RA | 1,444,037 | T→G | 13.8% | P329P (CCT→CCG) ‡ | ydbH → | putative membrane‑anchored protein, function unknown |
| RA | 1,444,038 | C→A | 12.5% | L330M (CTG→ATG) ‡ | ydbH → | putative membrane‑anchored protein, function unknown |
| RA | 1,444,039 | T→G | 13.0% | L330R (CTG→CGG) ‡ | ydbH → | putative membrane‑anchored protein, function unknown |
| RA | 1,445,616 | G→C | 6.0% | A856P (GCA→CCA) | ydbH → | putative membrane‑anchored protein, function unknown |
| RA | 1,445,621 | G→C | 6.7% | W857C (TGG→TGC) | ydbH → | putative membrane‑anchored protein, function unknown |
| RA | 1,449,799 | C→G | 7.9% | T517T (ACG→ACC) | tynA ← | tyramine oxidase, copper‑requiring |
| RA | 1,449,802 | A→G | 8.8% | A516A (GCT→GCC) ‡ | tynA ← | tyramine oxidase, copper‑requiring |
| RA | 1,449,803 | G→C | 8.9% | A516G (GCT→GGT) ‡ | tynA ← | tyramine oxidase, copper‑requiring |
| RA | 1,449,804 | C→T | 9.0% | A516T (GCT→ACT) ‡ | tynA ← | tyramine oxidase, copper‑requiring |
| RA | 1,449,807 | C→G | 9.2% | G515R (GGT→CGT) | tynA ← | tyramine oxidase, copper‑requiring |
| RA | 1,456,819 | T→A | 5.7% | I130I (ATT→ATA) | paaE → | ring 1,2‑phenylacetyl‑CoA epoxidase, NAD(P)H oxidoreductase component |
| RA | 1,457,976 | A→T | 8.3% | G160G (GGA→GGT) | paaF → | 2,3‑dehydroadipyl‑CoA hydratase |
| RA | 1,457,979 | A→T | 7.5% | E161D (GAA→GAT) | paaF → | 2,3‑dehydroadipyl‑CoA hydratase |
| RA | 1,457,981 | G→C | 8.0% | S162T (AGT→ACT) | paaF → | 2,3‑dehydroadipyl‑CoA hydratase |
| RA | 1,457,983 | A→T | 7.5% | I163F (ATC→TTC) | paaF → | 2,3‑dehydroadipyl‑CoA hydratase |
| RA | 1,457,986 | A→T | 7.4% | T164S (ACC→TCC) | paaF → | 2,3‑dehydroadipyl‑CoA hydratase |
| RA | 1,462,028 | G→A | 7.5% | G379D (GGT→GAT) ‡ | paaJ → | 3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase |
| RA | 1,462,029 | T→C | 7.3% | G379G (GGT→GGC) ‡ | paaJ → | 3‑oxoadipyl‑CoA/3‑oxo‑5,6‑dehydrosuberyl‑CoA thiolase |
| RA | 1,466,336 | C→G | 7.9% | pseudogene (945/2513 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,466,504 | A→G | 5.4% | pseudogene (1113/2513 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,466,639 | C→T | 10.8% | pseudogene (1248/2513 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,471,095 | G→C | 6.9% | pseudogene (579/3497 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,471,097 | C→A | 7.9% | pseudogene (581/3497 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,471,100 | T→G | 7.0% | pseudogene (584/3497 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,471,102 | G→C | 7.2% | pseudogene (586/3497 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| RA | 1,478,262 | T→C | 6.1% | L13L (TTA→CTA) | ynbB → | putative CDP‑diglyceride synthase |
| RA | 1,478,266 | T→A | 5.7% | I14N (ATT→AAT) ‡ | ynbB → | putative CDP‑diglyceride synthase |
| RA | 1,478,267 | T→A | 5.7% | I14I (ATT→ATA) ‡ | ynbB → | putative CDP‑diglyceride synthase |
| RA | 1,478,271 | G→A | 5.8% | A16T (GCA→ACA) | ynbB → | putative CDP‑diglyceride synthase |
| RA | 1,488,050 | T→C | 6.1% | intergenic (+15/‑182) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,488,051 | G→A | 6.2% | intergenic (+16/‑181) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,488,055 | C→A | 6.6% | intergenic (+20/‑177) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,488,057 | C→G | 7.5% | intergenic (+22/‑175) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,488,059 | T→G | 6.0% | intergenic (+24/‑173) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,488,063 | T→C | 6.4% | intergenic (+28/‑169) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,488,064 | G→A | 8.0% | intergenic (+29/‑168) | ydcF → / → aldA | DUF218 superfamily protein, SAM‑binding/aldehyde dehydrogenase A, NAD‑linked |
| RA | 1,498,892 | A→T | 7.5% | intergenic (+17/‑46) | ydcH → / → rimL | DUF465 family protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| RA | 1,498,894 | C→G | 8.0% | intergenic (+19/‑44) | ydcH → / → rimL | DUF465 family protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| RA | 1,498,896 | A→T | 7.7% | intergenic (+21/‑42) | ydcH → / → rimL | DUF465 family protein/ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| RA | 1,499,361 | A→G | 7.1% | N142D (AAC→GAC) | rimL → | ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| RA | 1,499,365 | A→T | 7.0% | Q143L (CAG→CTG) | rimL → | ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| RA | 1,499,369 | C→T | 7.3% | V144V (GTC→GTT) | rimL → | ribosomal‑protein‑L7/L12‑serine acetyltransferase |
| RA | 1,504,884 | T→C | 7.5% | intergenic (+19/+21) | insQ → / ← ydcO | IS609 transposase B/BenE family inner membrane putative transporter |
| RA | 1,504,888 | T→G | 8.5% | intergenic (+23/+17) | insQ → / ← ydcO | IS609 transposase B/BenE family inner membrane putative transporter |
| RA | 1,504,889 | C→A | 7.5% | intergenic (+24/+16) | insQ → / ← ydcO | IS609 transposase B/BenE family inner membrane putative transporter |
| RA | 1,504,893 | G→A | 7.6% | intergenic (+28/+12) | insQ → / ← ydcO | IS609 transposase B/BenE family inner membrane putative transporter |
| RA | 1,508,800 | G→A | 11.1% | intergenic (+58/+34) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,508,802 | A→G | 11.1% | intergenic (+60/+32) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,508,803 | A→C | 11.0% | intergenic (+61/+31) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,508,809 | T→A | 12.5% | intergenic (+67/+25) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,508,815 | G→T | 13.3% | intergenic (+73/+19) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,508,816 | C→T | 12.2% | intergenic (+74/+18) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,508,818 | T→C | 11.3% | intergenic (+76/+16) | ydcP → / ← yncJ | putative peptidase/uncharacterized protein |
| RA | 1,517,481 | C→G | 7.1% | R31R (CGC→CGG) | ydcX → | DUF2566 family protein |
| RA | 1,517,484 | C→G | 7.4% | I32M (ATC→ATG) | ydcX → | DUF2566 family protein |
| RA | 1,520,584 | A→G | 5.9% | D108G (GAC→GGC) ‡ | mcbR → | colanic acid and biofilm gene transcriptional regulator, MqsR‑controlled |
| RA | 1,520,585 | C→T | 5.2% | D108D (GAC→GAT) ‡ | mcbR → | colanic acid and biofilm gene transcriptional regulator, MqsR‑controlled |
| RA | 1,524,458:1 | +T | 5.1% | intergenic (+90/+23) | yncE → / ← ansP | ATP‑binding protein, periplasmic, function unknown/L‑asparagine transporter |
| RA | 1,524,463 | Δ1 bp | 5.2% | intergenic (+95/+18) | yncE → / ← ansP | ATP‑binding protein, periplasmic, function unknown/L‑asparagine transporter |
| RA | 1,528,193 | G→C | 5.6% | pseudogene (292/2037 nt) | rhsE → | pseudogene, Rhs family |
| RA | 1,528,195 | G→C | 5.5% | pseudogene (294/2037 nt) | rhsE → | pseudogene, Rhs family |
| RA | 1,530,490 | T→C | 5.6% | intergenic (+86/‑96) | ydcD → / → yncI | putative immunity protein for RhsE/pseudogene |
| RA | 1,530,496 | G→T | 5.5% | intergenic (+92/‑90) | ydcD → / → yncI | putative immunity protein for RhsE/pseudogene |
| RA | 1,530,499 | A→C | 5.5% | intergenic (+95/‑87) | ydcD → / → yncI | putative immunity protein for RhsE/pseudogene |
| RA | 1,530,505 | G→A | 5.4% | intergenic (+101/‑81) | ydcD → / → yncI | putative immunity protein for RhsE/pseudogene |
| RA | 1,540,645 | G→C | 6.5% | A649G (GCC→GGC) ‡ | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| RA | 1,540,646 | C→G | 5.9% | A649P (GCC→CCC) ‡ | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| RA | 1,540,647 | G→C | 6.1% | R648R (CGC→CGG) | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| RA | 1,550,656 | T→A | 5.4% | Y66N (TAC→AAC) ‡ | fdnH → | formate dehydrogenase‑N, Fe‑S (beta) subunit, nitrate‑inducible |
| RA | 1,550,657 | A→T | 5.5% | Y66F (TAC→TTC) ‡ | fdnH → | formate dehydrogenase‑N, Fe‑S (beta) subunit, nitrate‑inducible |
| RA | 1,550,660 | A→T | 5.6% | D67V (GAT→GTT) ‡ | fdnH → | formate dehydrogenase‑N, Fe‑S (beta) subunit, nitrate‑inducible |
| RA | 1,550,661 | T→A | 6.5% | D67E (GAT→GAA) ‡ | fdnH → | formate dehydrogenase‑N, Fe‑S (beta) subunit, nitrate‑inducible |
| RA | 1,552,191 | C→A | 12.8% | intergenic (+200/+207) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| RA | 1,552,256 | G→A | 7.2% | intergenic (+265/+142) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| RA | 1,552,263 | G→T | 7.6% | intergenic (+272/+135) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| RA | 1,552,264 | A→C | 6.6% | intergenic (+273/+134) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| RA | 1,552,270 | T→G | 8.6% | intergenic (+279/+128) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| RA | 1,552,271 | T→C | 8.0% | intergenic (+280/+127) | fdnI → / ← yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| RA | 1,555,781 | G→C | 6.7% | intergenic (‑112/+45) | maeA ← / ← sra | malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme/stationary‑phase‑induced ribosome‑associated protein |
| RA | 1,555,782 | C→T | 6.6% | intergenic (‑113/+44) | maeA ← / ← sra | malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme/stationary‑phase‑induced ribosome‑associated protein |
| RA | 1,555,783 | A→G | 5.9% | intergenic (‑114/+43) | maeA ← / ← sra | malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme/stationary‑phase‑induced ribosome‑associated protein |
| RA | 1,555,784 | G→C | 6.1% | intergenic (‑115/+42) | maeA ← / ← sra | malate dehydrogenase, decarboxylating, NAD‑requiring; malic enzyme/stationary‑phase‑induced ribosome‑associated protein |
| RA | 1,567,466 | G→C | 11.4% | intergenic (‑326/+38) | dosC ← / ← yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog |
| RA | 1,567,467 | G→T | 12.4% | intergenic (‑327/+37) | dosC ← / ← yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog |
| RA | 1,567,469 | A→T | 11.6% | intergenic (‑329/+35) | dosC ← / ← yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog |
| RA | 1,567,471 | A→C | 12.3% | intergenic (‑331/+33) | dosC ← / ← yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog |
| RA | 1,567,472 | G→C | 11.4% | intergenic (‑332/+32) | dosC ← / ← yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog |
| RA | 1,568,915 | G→A | 7.0% | intergenic (‑92/+39) | yddW ← / ← gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| RA | 1,568,917 | A→T | 6.6% | intergenic (‑94/+37) | yddW ← / ← gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| RA | 1,568,919 | T→C | 6.8% | intergenic (‑96/+35) | yddW ← / ← gadC | liprotein, glycosyl hydrolase homolog/glutamate:gamma‑aminobutyric acid antiporter |
| RA | 1,572,928 | C→G | 6.6% | A759P (GCA→CCA) | pqqL ← | putative periplasmic M16 family zinc metalloendopeptidase |
| RA | 1,602,239 | A→T | 5.9% | K250N (AAA→AAT) | lsrA → | autoinducer 2 import ATP‑binding protein |
| RA | 1,603,724 | A→C | 9.7% | T236P (ACC→CCC) | lsrC → | autoinducer 2 import system permease protein |
| RA | 1,603,735 | G→T | 8.8% | G239G (GGG→GGT) | lsrC → | autoinducer 2 import system permease protein |
| RA | 1,609,200 | C→T | 7.0% | intergenic (‑178/+29) | yneE ← / ← uxaB | bestrophin family putative inner membrane protein/altronate oxidoreductase, NAD‑dependent |
| RA | 1,609,201 | G→T | 7.1% | intergenic (‑179/+28) | yneE ← / ← uxaB | bestrophin family putative inner membrane protein/altronate oxidoreductase, NAD‑dependent |
| RA | 1,609,202 | A→C | 7.6% | intergenic (‑180/+27) | yneE ← / ← uxaB | bestrophin family putative inner membrane protein/altronate oxidoreductase, NAD‑dependent |
| RA | 1,609,203 | A→G | 6.9% | intergenic (‑181/+26) | yneE ← / ← uxaB | bestrophin family putative inner membrane protein/altronate oxidoreductase, NAD‑dependent |
| RA | 1,620,224 | C→G | 10.2% | intergenic (+17/+14) | marB → / ← eamA | periplasmic mar operon regulator/cysteine and O‑acetyl‑L‑serine efflux system |
| RA | 1,620,227 | C→G | 10.9% | intergenic (+20/+11) | marB → / ← eamA | periplasmic mar operon regulator/cysteine and O‑acetyl‑L‑serine efflux system |
| RA | 1,625,304 | Δ1 bp | 7.3% | intergenic (+13/+31) | ydeJ → / ← dcp | inactive PncC family protein/dipeptidyl carboxypeptidase II |
| RA | 1,625,306 | C→A | 8.1% | intergenic (+15/+29) | ydeJ → / ← dcp | inactive PncC family protein/dipeptidyl carboxypeptidase II |
| RA | 1,625,312:1 | +G | 6.9% | intergenic (+21/+23) | ydeJ → / ← dcp | inactive PncC family protein/dipeptidyl carboxypeptidase II |
| RA | 1,625,313 | T→C | 6.0% | intergenic (+22/+22) | ydeJ → / ← dcp | inactive PncC family protein/dipeptidyl carboxypeptidase II |
| RA | 1,629,435 | G→A | 7.0% | intergenic (+17/+18) | ydfZ → / ← ydfI | selenoprotein, function unknown/putative NAD‑dependent D‑mannonate oxidoreductase |
| RA | 1,629,436 | A→T | 6.5% | intergenic (+18/+17) | ydfZ → / ← ydfI | selenoprotein, function unknown/putative NAD‑dependent D‑mannonate oxidoreductase |
| RA | 1,629,437 | T→C | 6.5% | intergenic (+19/+16) | ydfZ → / ← ydfI | selenoprotein, function unknown/putative NAD‑dependent D‑mannonate oxidoreductase |
| RA | 1,640,497 | T→C | 5.2% | K30R (AAA→AGA) ‡ | essQ ← | Qin prophage; putative S lysis protein |
| RA | 1,640,498 | T→G | 5.3% | K30Q (AAA→CAA) ‡ | essQ ← | Qin prophage; putative S lysis protein |
| RA | 1,640,501 | C→A | 5.3% | D29Y (GAT→TAT) | essQ ← | Qin prophage; putative S lysis protein |
| RA | 1,640,502 | G→A | 5.4% | L28L (CTC→CTT) | essQ ← | Qin prophage; putative S lysis protein |
| RA | 1,642,370 | C→G | 6.5% | intergenic (+303/+119) | cspF → / ← quuQ | Qin prophage; cold shock protein/Qin prophage; putative antitermination protein Q |
| RA | 1,642,373 | C→G | 6.7% | intergenic (+306/+116) | cspF → / ← quuQ | Qin prophage; cold shock protein/Qin prophage; putative antitermination protein Q |
| RA | 1,650,147 | G→A | 9.7% | pseudogene (70/765 nt) | ydfE → | Qin prophage; pseudogene;Phage or Prophage Related |
| RA | 1,650,148 | T→C | 9.5% | pseudogene (71/765 nt) | ydfE → | Qin prophage; pseudogene;Phage or Prophage Related |
| RA | 1,660,438 | A→G | 6.6% | S790S (TCA→TCG) | ynfE → | putative selenate reductase, periplasmic |
| RA | 1,660,442 | C→G | 6.5% | L792V (CTG→GTG) | ynfE → | putative selenate reductase, periplasmic |
| RA | 1,660,446 | C→T | 6.1% | A793V (GCG→GTG) | ynfE → | putative selenate reductase, periplasmic |
| RA | 1,660,594 | A→T | 5.4% | E13D (GAA→GAT) | ynfF → | S‑ and N‑oxide reductase, A subunit, periplasmic |
| RA | 1,661,943 | C→A | 5.0% | P463H (CCC→CAC) | ynfF → | S‑ and N‑oxide reductase, A subunit, periplasmic |
| RA | 1,666,466 | T→G | 9.1% | Y384* (TAT→TAG) | clcB → | H(+)/Cl(‑) exchange transporter |
| RA | 1,666,468 | A→T | 6.4% | Q385L (CAG→CTG) | clcB → | H(+)/Cl(‑) exchange transporter |
| RA | 1,666,470 | C→A | 6.8% | L386I (CTA→ATA) | clcB → | H(+)/Cl(‑) exchange transporter |
| RA | 1,674,171 | Δ1 bp | 6.0% | coding (259/1035 nt) | tqsA → | pheromone AI‑2 transporter |
| RA | 1,674,177 | G→T | 6.9% | E89* (GAG→TAG) ‡ | tqsA → | pheromone AI‑2 transporter |
| RA | 1,674,178 | A→C | 7.8% | E89A (GAG→GCG) ‡ | tqsA → | pheromone AI‑2 transporter |
| RA | 1,674,955 | A→T | 6.6% | intergenic (+8/+17) | tqsA → / ← pntB | pheromone AI‑2 transporter/pyridine nucleotide transhydrogenase, beta subunit |
| RA | 1,674,958 | A→T | 5.9% | intergenic (+11/+14) | tqsA → / ← pntB | pheromone AI‑2 transporter/pyridine nucleotide transhydrogenase, beta subunit |
| RA | 1,692,976 | T→C | 7.6% | T430A (ACG→GCG) | uidB ← | glucuronide transporter |
| RA | 1,693,416 | A→G | 5.5% | L283P (CTG→CCG) ‡ | uidB ← | glucuronide transporter |
| RA | 1,693,417 | G→C | 5.2% | L283V (CTG→GTG) ‡ | uidB ← | glucuronide transporter |
| RA | 1,693,418 | C→T | 5.4% | P282P (CCG→CCA) | uidB ← | glucuronide transporter |
| RA | 1,701,108 | A→T | 11.1% | N51I (AAT→ATT) | malY → | PLP‑dependent beta‑cystathionase and maltose regulon regulator |
| RA | 1,702,500 | C→G | 5.5% | H90D (CAC→GAC) | add → | adenosine deaminase |
| RA | 1,702,505 | C→G | 5.5% | G91G (GGC→GGG) | add → | adenosine deaminase |
| RA | 1,703,251 | A→T | 7.2% | intergenic (+17/+17) | add → / ← ydgJ | adenosine deaminase/putative oxidoreductase |
| RA | 1,707,044 | T→G | 14.2% | R42R (CGT→CGG) | rsxC → | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| RA | 1,708,844 | C→G | 28.1% | A642A (GCC→GCG) | rsxC → | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| RA | 1,708,847 | G→A | 24.3% | E643E (GAG→GAA) | rsxC → | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| RA | 1,712,337 | A→T | 12.7% | intergenic (+179/‑432) | nth → / → dtpA | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A |
| RA | 1,712,338 | A→T | 12.0% | intergenic (+180/‑431) | nth → / → dtpA | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A |
| RA | 1,715,919 | T→G | 8.7% | intergenic (‑30/+29) | pdxY ← / ← tyrS | pyridoxamine kinase/tyrosyl‑tRNA synthetase |
| RA | 1,715,920 | T→A | 8.7% | intergenic (‑31/+28) | pdxY ← / ← tyrS | pyridoxamine kinase/tyrosyl‑tRNA synthetase |
| RA | 1,715,921 | T→A | 8.2% | intergenic (‑32/+27) | pdxY ← / ← tyrS | pyridoxamine kinase/tyrosyl‑tRNA synthetase |
| RA | 1,715,922 | C→A | 8.7% | intergenic (‑33/+26) | pdxY ← / ← tyrS | pyridoxamine kinase/tyrosyl‑tRNA synthetase |
| RA | 1,724,279 | T→A | 9.0% | D126V (GAT→GTT) ‡ | sodC ← | superoxide dismutase, Cu, Zn, periplasmic |
| RA | 1,724,280 | C→A | 8.7% | D126Y (GAT→TAT) ‡ | sodC ← | superoxide dismutase, Cu, Zn, periplasmic |
| RA | 1,724,282 | G→C | 8.1% | T125S (ACC→AGC) | sodC ← | superoxide dismutase, Cu, Zn, periplasmic |
| RA | 1,724,285 | G→C | 7.8% | A124G (GCT→GGT) | sodC ← | superoxide dismutase, Cu, Zn, periplasmic |
| RA | 1,724,287 | T→G | 8.5% | K123N (AAA→AAC) ‡ | sodC ← | superoxide dismutase, Cu, Zn, periplasmic |
| RA | 1,724,288 | T→A | 7.8% | K123I (AAA→ATA) ‡ | sodC ← | superoxide dismutase, Cu, Zn, periplasmic |
| RA | 1,743,155 | C→G | 9.0% | D30H (GAC→CAC) | ribC ← | riboflavin synthase, alpha subunit |
| RA | 1,743,157 | G→A | 9.1% | P29L (CCC→CTC) | ribC ← | riboflavin synthase, alpha subunit |
| RA | 1,743,160 | A→T | 9.1% | L28* (TTA→TAA) | ribC ← | riboflavin synthase, alpha subunit |
| RA | 1,743,163 | T→C | 9.5% | E27G (GAG→GGG) | ribC ← | riboflavin synthase, alpha subunit |
| RA | 1,743,165 | C→G | 9.8% | V26V (GTG→GTC) | ribC ← | riboflavin synthase, alpha subunit |
| RA | 1,757,688 | T→A | 7.8% | intergenic (+31/+33) | lpp → / ← ldtE | murein lipoprotein/murein L,D‑transpeptidase |
| RA | 1,764,687 | T→C | 7.1% | intergenic (‑301/+26) | sufA ← / ← rydB | Fe‑S cluster assembly protein/novel sRNA, function unknown |
| RA | 1,764,693 | C→T | 7.2% | intergenic (‑307/+20) | sufA ← / ← rydB | Fe‑S cluster assembly protein/novel sRNA, function unknown |
| RA | 1,764,694 | G→C | 8.1% | intergenic (‑308/+19) | sufA ← / ← rydB | Fe‑S cluster assembly protein/novel sRNA, function unknown |
| RA | 1,764,695 | A→G | 7.4% | intergenic (‑309/+18) | sufA ← / ← rydB | Fe‑S cluster assembly protein/novel sRNA, function unknown |
| RA | 1,764,701 | G→A | 7.2% | intergenic (‑315/+12) | sufA ← / ← rydB | Fe‑S cluster assembly protein/novel sRNA, function unknown |
| RA | 1,770,387 | C→T | 6.1% | noncoding (16/106 nt) | rprA → | sRNA antisense activator for RpoS translation, Hfq‑dependent |
| RA | 1,770,390 | A→G | 6.2% | noncoding (19/106 nt) | rprA → | sRNA antisense activator for RpoS translation, Hfq‑dependent |
| RA | 1,778,364 | C→T | 5.6% | intergenic (+17/+26) | ydiO → / ← ydiP | putative acyl‑CoA dehydrogenase/putative DNA‑binding transcriptional regulator |
| RA | 1,778,367 | C→G | 5.6% | intergenic (+20/+23) | ydiO → / ← ydiP | putative acyl‑CoA dehydrogenase/putative DNA‑binding transcriptional regulator |
| RA | 1,778,372 | C→G | 5.5% | intergenic (+25/+18) | ydiO → / ← ydiP | putative acyl‑CoA dehydrogenase/putative DNA‑binding transcriptional regulator |
| RA | 1,778,375 | A→G | 5.5% | intergenic (+28/+15) | ydiO → / ← ydiP | putative acyl‑CoA dehydrogenase/putative DNA‑binding transcriptional regulator |
| RA | 1,787,558 | C→G | 6.6% | I38M (ATC→ATG) | ppsR → | PEP synthase kinase and PEP synthase pyrophosphorylase |
| RA | 1,788,336 | A→T | 6.8% | intergenic (+58/‑99) | ppsR → / → aroH | PEP synthase kinase and PEP synthase pyrophosphorylase/3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tryptophan repressible |
| RA | 1,789,497 | T→G | 5.6% | intergenic (+16/‑116) | aroH → / → ydiE | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tryptophan repressible/hemin uptake protein HemP homolog |
| RA | 1,789,499 | A→C | 7.0% | intergenic (+18/‑114) | aroH → / → ydiE | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tryptophan repressible/hemin uptake protein HemP homolog |
| RA | 1,789,500 | C→A | 5.1% | intergenic (+19/‑113) | aroH → / → ydiE | 3‑deoxy‑D‑arabino‑heptulosonate‑7‑phosphate synthase, tryptophan repressible/hemin uptake protein HemP homolog |
| RA | 1,792,240 | T→A | 8.7% | intergenic (‑220/+27) | ydiV ← / ← nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| RA | 1,792,241 | A→T | 9.0% | intergenic (‑221/+26) | ydiV ← / ← nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| RA | 1,792,242 | T→A | 8.4% | intergenic (‑222/+25) | ydiV ← / ← nlpC | anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase/putative C40 clan peptidase lipoprotein |
| RA | 1,793,667 | T→G | 9.1% | E148A (GAA→GCA) ‡ | btuE ← | glutathione peroxidase |
| RA | 1,793,668 | C→A | 8.9% | E148* (GAA→TAA) ‡ | btuE ← | glutathione peroxidase |
| RA | 1,795,227 | A→T | 7.0% | intergenic (‑75/+26) | btuC ← / ← ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| RA | 1,795,228 | G→C | 7.5% | intergenic (‑76/+25) | btuC ← / ← ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| RA | 1,795,229 | A→T | 7.3% | intergenic (‑77/+24) | btuC ← / ← ihfA | vitamin B12 ABC transporter permease/integration host factor (IHF), DNA‑binding protein, alpha subunit |
| RA | 1,797,388 | G→T | 12.1% | P186Q (CCG→CAG) | pheT ← | phenylalanine tRNA synthetase, beta subunit |
| RA | 1,797,391 | A→C | 10.6% | L185R (CTG→CGG) | pheT ← | phenylalanine tRNA synthetase, beta subunit |
| RA | 1,799,370 | Δ1 bp | 5.6% | intergenic (‑100/+23) | pheM ← / ← rplT | phenylalanyl‑tRNA synthetase operon leader peptide/50S ribosomal subunit protein L20 |
| RA | 1,799,374:1 | +T | 5.6% | intergenic (‑104/+19) | pheM ← / ← rplT | phenylalanyl‑tRNA synthetase operon leader peptide/50S ribosomal subunit protein L20 |
| RA | 1,810,062 | T→C | 8.6% | intergenic (+14/‑149) | yniC → / → ydjM | 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA |
| RA | 1,810,065 | T→G | 9.2% | intergenic (+17/‑146) | yniC → / → ydjM | 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA |
| RA | 1,810,066 | C→A | 9.7% | intergenic (+18/‑145) | yniC → / → ydjM | 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA |
| RA | 1,810,069 | G→A | 8.3% | intergenic (+21/‑142) | yniC → / → ydjM | 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA |
| RA | 1,816,192 | G→A | 5.3% | intergenic (+64/+194) | katE → / ← chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| RA | 1,816,193 | C→A | 5.0% | intergenic (+65/+193) | katE → / ← chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| RA | 1,816,199 | G→T | 5.8% | intergenic (+71/+187) | katE → / ← chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| RA | 1,816,200 | A→C | 5.9% | intergenic (+72/+186) | katE → / ← chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| RA | 1,816,206 | T→G | 6.6% | intergenic (+78/+180) | katE → / ← chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| RA | 1,816,207 | T→C | 6.1% | intergenic (+79/+179) | katE → / ← chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| RA | 1,821,241 | T→A | 6.1% | intergenic (‑27/+58) | chbC ← / ← chbB | N,N'‑diacetylchitobiose‑specific enzyme IIC component of PTS/N,N'‑diacetylchitobiose‑specific enzyme IIB component of PTS |
| RA | 1,821,243 | A→T | 5.8% | intergenic (‑29/+56) | chbC ← / ← chbB | N,N'‑diacetylchitobiose‑specific enzyme IIC component of PTS/N,N'‑diacetylchitobiose‑specific enzyme IIB component of PTS |
| RA | 1,821,244 | A→T | 6.6% | intergenic (‑30/+55) | chbC ← / ← chbB | N,N'‑diacetylchitobiose‑specific enzyme IIC component of PTS/N,N'‑diacetylchitobiose‑specific enzyme IIB component of PTS |
| RA | 1,823,335 | G→C | 9.1% | intergenic (+50/‑180) | nadE → / → cho | NAD synthetase, NH3/glutamine‑dependent/endonuclease of nucleotide excision repair |
| RA | 1,823,338 | G→C | 9.0% | intergenic (+53/‑177) | nadE → / → cho | NAD synthetase, NH3/glutamine‑dependent/endonuclease of nucleotide excision repair |
| RA | 1,825,936 | T→A | 6.2% | intergenic (‑311/+19) | spy ← / ← astE | periplasmic ATP‑independent protein refolding chaperone, stress‑induced/succinylglutamate desuccinylase |
| RA | 1,825,937 | G→T | 6.8% | intergenic (‑312/+18) | spy ← / ← astE | periplasmic ATP‑independent protein refolding chaperone, stress‑induced/succinylglutamate desuccinylase |
| RA | 1,825,938 | A→C | 6.5% | intergenic (‑313/+17) | spy ← / ← astE | periplasmic ATP‑independent protein refolding chaperone, stress‑induced/succinylglutamate desuccinylase |
| RA | 1,825,939 | T→A | 7.1% | intergenic (‑314/+16) | spy ← / ← astE | periplasmic ATP‑independent protein refolding chaperone, stress‑induced/succinylglutamate desuccinylase |
| RA | 1,830,060 | G→C | 8.0% | R236G (CGC→GGC) | astA ← | arginine succinyltransferase |
| RA | 1,830,061 | G→T | 6.9% | A235A (GCC→GCA) | astA ← | arginine succinyltransferase |
| RA | 1,830,064 | A→C | 8.0% | P234P (CCT→CCG) ‡ | astA ← | arginine succinyltransferase |
| RA | 1,830,065 | G→C | 10.8% | P234R (CCT→CGT) ‡ | astA ← | arginine succinyltransferase |
| RA | 1,836,905 | G→C | 5.1% | S278T (AGC→ACC) | ynjB → | putative ABC transporter periplasmic binding protein |
| RA | 1,851,204 | A→C | 6.4% | T115T (ACA→ACC) | ansA → | cytoplasmic L‑asparaginase 1 |
| RA | 1,851,205 | G→C | 6.5% | G116R (GGG→CGG) ‡ | ansA → | cytoplasmic L‑asparaginase 1 |
| RA | 1,851,206 | G→T | 7.2% | G116V (GGG→GTG) ‡ | ansA → | cytoplasmic L‑asparaginase 1 |
| RA | 1,852,038 | A→C | 7.5% | Q51P (CAG→CCG) ‡ | pncA → | nicotinamidase/pyrazinamidase |
| RA | 1,852,039 | G→T | 7.5% | Q51H (CAG→CAT) ‡ | pncA → | nicotinamidase/pyrazinamidase |
| RA | 1,854,021 | A→G | 5.7% | intergenic (‑42/+75) | ydjE ← / ← ydjF | putative MFS sugar transporter, membrane protein/putative DNA‑binding transcriptional regulator |
| RA | 1,854,023 | T→G | 5.7% | intergenic (‑44/+73) | ydjE ← / ← ydjF | putative MFS sugar transporter, membrane protein/putative DNA‑binding transcriptional regulator |
| RA | 1,854,024 | C→A | 5.2% | intergenic (‑45/+72) | ydjE ← / ← ydjF | putative MFS sugar transporter, membrane protein/putative DNA‑binding transcriptional regulator |
| RA | 1,854,026 | C→T | 5.6% | intergenic (‑47/+70) | ydjE ← / ← ydjF | putative MFS sugar transporter, membrane protein/putative DNA‑binding transcriptional regulator |
| RA | 1,856,333 | T→G | 9.5% | E199A (GAG→GCG) ‡ | ydjH ← | putative kinase |
| RA | 1,856,334 | C→A | 9.1% | E199* (GAG→TAG) ‡ | ydjH ← | putative kinase |
| RA | 1,861,419 | A→G | 5.1% | intergenic (‑87/+283) | ydjL ← / ← yeaC | putative Zn‑dependent NAD(P)‑binding oxidoreductase/DUF1315 family protein |
| RA | 1,861,425 | A→C | 5.3% | intergenic (‑93/+277) | ydjL ← / ← yeaC | putative Zn‑dependent NAD(P)‑binding oxidoreductase/DUF1315 family protein |
| RA | 1,861,428 | G→T | 5.4% | intergenic (‑96/+274) | ydjL ← / ← yeaC | putative Zn‑dependent NAD(P)‑binding oxidoreductase/DUF1315 family protein |
| RA | 1,861,434 | C→T | 5.4% | intergenic (‑102/+268) | ydjL ← / ← yeaC | putative Zn‑dependent NAD(P)‑binding oxidoreductase/DUF1315 family protein |
| RA | 1,863,800 | T→C | 5.9% | intergenic (+34/‑50) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein |
| RA | 1,863,801 | T→G | 5.3% | intergenic (+35/‑49) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein |
| RA | 1,863,802 | C→A | 6.7% | intergenic (+36/‑48) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein |
| RA | 1,863,803 | G→A | 6.2% | intergenic (+37/‑47) | gapA → / → yeaD | glyceraldehyde‑3‑phosphate dehydrogenase A/D‑hexose‑6‑phosphate epimerase‑like protein |
| RA | 1,864,758 | G→A | 8.5% | intergenic (+24/+24) | yeaD → / ← yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| RA | 1,864,763 | A→T | 8.3% | intergenic (+29/+19) | yeaD → / ← yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| RA | 1,864,768 | T→C | 8.0% | intergenic (+34/+14) | yeaD → / ← yeaE | D‑hexose‑6‑phosphate epimerase‑like protein/aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent |
| RA | 1,865,682 | G→C | 8.2% | intergenic (‑46/+44) | yeaE ← / ← mipA | aldo‑keto reductase, methylglyoxal to acetol, NADPH‑dependent/scaffolding protein for murein synthesizing machinery |
| RA | 1,868,859 | Δ1 bp | 7.1% | intergenic (+17/‑96) | yeaG → / → yeaH | protein kinase, endogenous substrate unidentified; autokinase/UPF0229 family protein |
| RA | 1,868,865:1 | +G | 8.0% | intergenic (+23/‑90) | yeaG → / → yeaH | protein kinase, endogenous substrate unidentified; autokinase/UPF0229 family protein |
| RA | 1,900,671 | C→G | 6.5% | T305T (ACG→ACC) ‡ | yoaE ← | putative membrane protein/conserved protein |
| RA | 1,900,672 | G→A | 6.5% | T305M (ACG→ATG) ‡ | yoaE ← | putative membrane protein/conserved protein |
| RA | 1,900,679 | T→C | 6.4% | I303V (ATC→GTC) | yoaE ← | putative membrane protein/conserved protein |
| RA | 1,900,680 | C→G | 6.0% | G302G (GGG→GGC) | yoaE ← | putative membrane protein/conserved protein |
| RA | 1,901,029 | Δ1 bp | 6.2% | coding (557/1557 nt) | yoaE ← | putative membrane protein/conserved protein |
| RA | 1,901,034 | C→G | 6.2% | T184T (ACG→ACC) | yoaE ← | putative membrane protein/conserved protein |
| RA | 1,906,229 | T→G | 8.3% | I181S (ATC→AGC) ‡ | mntP → | putative Mn(2+) efflux pump, mntR‑regulated |
| RA | 1,906,230 | C→G | 8.3% | I181M (ATC→ATG) ‡ | mntP → | putative Mn(2+) efflux pump, mntR‑regulated |
| RA | 1,906,231 | C→A | 10.5% | L182I (CTC→ATC) | mntP → | putative Mn(2+) efflux pump, mntR‑regulated |
| RA | 1,907,241 | G→C | 5.4% | N65K (AAC→AAG) | cspC ← | stress protein, member of the CspA‑family |
| RA | 1,912,748 | T→G | 6.5% | intergenic (‑172/+20) | htpX ← / ← prc | putative endopeptidase/carboxy‑terminal protease for penicillin‑binding protein 3 |
| RA | 1,912,749 | T→A | 6.2% | intergenic (‑173/+19) | htpX ← / ← prc | putative endopeptidase/carboxy‑terminal protease for penicillin‑binding protein 3 |
| RA | 1,912,750 | T→A | 7.0% | intergenic (‑174/+18) | htpX ← / ← prc | putative endopeptidase/carboxy‑terminal protease for penicillin‑binding protein 3 |
| RA | 1,912,751 | C→A | 7.0% | intergenic (‑175/+17) | htpX ← / ← prc | putative endopeptidase/carboxy‑terminal protease for penicillin‑binding protein 3 |
| RA | 1,926,882 | C→A | 6.0% | G653V (GGC→GTC) | ptrB ← | protease II |
| RA | 1,926,888 | C→A | 6.2% | G651V (GGC→GTC) | ptrB ← | protease II |
| RA | 1,926,891 | G→C | 6.4% | S650* (TCA→TGA) | ptrB ← | protease II |
| RA | 1,926,894 | T→G | 6.8% | D649A (GAC→GCC) | ptrB ← | protease II |
| RA | 1,926,900 | T→G | 6.1% | D647A (GAC→GCC) | ptrB ← | protease II |
| RA | 1,928,799 | A→C | 9.6% | L14R (CTT→CGT) | ptrB ← | protease II |
| RA | 1,928,802 | G→T | 9.3% | T13K (ACG→AAG) | ptrB ← | protease II |
| RA | 1,932,094 | C→G | 8.0% | intergenic (+35/+21) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/KHG/KDPG aldolase; 2‑dehydro‑3‑deoxy‑phosphogluconate/4‑hydroxy‑2‑ oxoglutarate aldolase |
| RA | 1,932,095 | T→A | 8.3% | intergenic (+36/+20) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/KHG/KDPG aldolase; 2‑dehydro‑3‑deoxy‑phosphogluconate/4‑hydroxy‑2‑ oxoglutarate aldolase |
| RA | 1,932,096 | C→G | 8.3% | intergenic (+37/+19) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/KHG/KDPG aldolase; 2‑dehydro‑3‑deoxy‑phosphogluconate/4‑hydroxy‑2‑ oxoglutarate aldolase |
| RA | 1,944,226 | G→A | 12.5% | intergenic (+27/+120) | znuB → / ← ruvB | zinc ABC transporter permease/ATP‑dependent DNA helicase, component of RuvABC resolvasome |
| RA | 1,944,227 | C→A | 12.9% | intergenic (+28/+119) | znuB → / ← ruvB | zinc ABC transporter permease/ATP‑dependent DNA helicase, component of RuvABC resolvasome |
| RA | 1,944,233 | G→T | 9.0% | intergenic (+34/+113) | znuB → / ← ruvB | zinc ABC transporter permease/ATP‑dependent DNA helicase, component of RuvABC resolvasome |
| RA | 1,944,234 | A→C | 9.1% | intergenic (+35/+112) | znuB → / ← ruvB | zinc ABC transporter permease/ATP‑dependent DNA helicase, component of RuvABC resolvasome |
| RA | 1,944,240 | T→G | 11.0% | intergenic (+41/+106) | znuB → / ← ruvB | zinc ABC transporter permease/ATP‑dependent DNA helicase, component of RuvABC resolvasome |
| RA | 1,944,241 | T→C | 8.7% | intergenic (+42/+105) | znuB → / ← ruvB | zinc ABC transporter permease/ATP‑dependent DNA helicase, component of RuvABC resolvasome |
| RA | 1,948,179 | T→A | 9.1% | intergenic (‑28/+1) | yebC ← / ← nudB | UPF0082 family protein/dihydroneopterin triphosphate pyrophosphatase |
| RA | 1,948,180 | T→A | 8.7% | *151C (TGA→TGT) | nudB ← | dihydroneopterin triphosphate pyrophosphatase |
| MC JC | 1,978,503 | Δ776 bp | 100% | insB1–insA | insB1, insA | |
| RA | 1,980,103:1 | +C | 5.1% | coding (351/429 nt) | uspC → | universal stress protein |
| RA | 1,980,110 | T→G | 5.4% | S120A (TCC→GCC) ‡ | uspC → | universal stress protein |
| RA | 1,980,112 | C→A | 5.0% | S120S (TCC→TCA) ‡ | uspC → | universal stress protein |
| RA | 1,982,500 | T→C | 10.6% | intergenic (‑113/+54) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase, biosynthetic/L‑arabinose ABC transporter permease |
| RA | 1,982,501 | T→C | 10.8% | intergenic (‑114/+53) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase, biosynthetic/L‑arabinose ABC transporter permease |
| RA | 1,982,504 | G→A | 10.5% | intergenic (‑117/+50) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase, biosynthetic/L‑arabinose ABC transporter permease |
| RA | 1,982,505 | G→A | 10.6% | intergenic (‑118/+49) | otsB ← / ← araH | trehalose‑6‑phosphate phosphatase, biosynthetic/L‑arabinose ABC transporter permease |
| RA | 1,985,112 | C→G | 7.0% | intergenic (‑43/+27) | araG ← / ← araF | L‑arabinose ABC transporter ATPase/L‑arabinose ABC transporter periplasmic binding protein |
| RA | 1,988,050 | A→G | 5.2% | intergenic (‑91/‑172) | azuC ← / → yecR | acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
| RA | 2,009,731 | A→G | 5.8% | intergenic (+19/‑90) | yedF → / → yedK | putative TusA family sulfurtransferase/DUF159 family protein |
| RA | 2,009,732 | C→G | 5.9% | intergenic (+20/‑89) | yedF → / → yedK | putative TusA family sulfurtransferase/DUF159 family protein |
| RA | 2,009,733 | C→T | 5.9% | intergenic (+21/‑88) | yedF → / → yedK | putative TusA family sulfurtransferase/DUF159 family protein |
| RA | 2,014,955 | T→C | 6.6% | F26L (TTC→CTC) ‡ | fliG → | flagellar motor switching and energizing component |
| RA | 2,014,957 | C→T | 5.5% | F26F (TTC→TTT) ‡ | fliG → | flagellar motor switching and energizing component |
| RA | 2,014,958 | A→G | 5.4% | K27E (AAG→GAG) ‡ | fliG → | flagellar motor switching and energizing component |
| RA | 2,014,960 | G→A | 5.3% | K27K (AAG→AAA) ‡ | fliG → | flagellar motor switching and energizing component |
| RA | 2,015,698 | A→T | 7.3% | K273N (AAA→AAT) | fliG → | flagellar motor switching and energizing component |
| RA | 2,019,460 | G→A | 100% | V359I (GTC→ATC) | fliK → | flagellar hook‑length control protein |
| RA | 2,024,609 | T→G | 5.6% | intergenic (+18/+26) | rcsA → / ← dsrB | transcriptional regulator of colanic acid capsular biosynthesis/uncharacterized protein |
| RA | 2,024,612 | C→A | 5.1% | intergenic (+21/+23) | rcsA → / ← dsrB | transcriptional regulator of colanic acid capsular biosynthesis/uncharacterized protein |
| RA | 2,028,158 | G→C | 10.7% | intergenic (‑141/+30) | yedQ ← / ← yodC | putative membrane‑anchored diguanylate cyclase/uncharacterized protein |
| RA | 2,028,159 | T→A | 10.9% | intergenic (‑142/+29) | yedQ ← / ← yodC | putative membrane‑anchored diguanylate cyclase/uncharacterized protein |
| RA | 2,028,160 | G→C | 11.5% | intergenic (‑143/+28) | yedQ ← / ← yodC | putative membrane‑anchored diguanylate cyclase/uncharacterized protein |
| RA | 2,032,336 | G→C | 7.9% | intergenic (‑19/+48) | dcm ← / ← yedJ | DNA cytosine methyltransferase/putative HD superfamily phosphohydrolase |
| RA | 2,041,159 | G→A | 5.4% | intergenic (+41/‑216) | yedZ → / → zinT | inner membrane heme subunit for periplasmic YedYZ reductase/zinc and cadmium binding protein, periplasmic |
| RA | 2,041,160 | T→G | 5.8% | intergenic (+42/‑215) | yedZ → / → zinT | inner membrane heme subunit for periplasmic YedYZ reductase/zinc and cadmium binding protein, periplasmic |
| RA | 2,041,166 | G→T | 6.7% | intergenic (+48/‑209) | yedZ → / → zinT | inner membrane heme subunit for periplasmic YedYZ reductase/zinc and cadmium binding protein, periplasmic |
| RA | 2,041,167 | A→C | 6.2% | intergenic (+49/‑208) | yedZ → / → zinT | inner membrane heme subunit for periplasmic YedYZ reductase/zinc and cadmium binding protein, periplasmic |
| RA | 2,041,173 | C→A | 7.0% | intergenic (+55/‑202) | yedZ → / → zinT | inner membrane heme subunit for periplasmic YedYZ reductase/zinc and cadmium binding protein, periplasmic |
| RA | 2,041,174 | T→C | 5.6% | intergenic (+56/‑201) | yedZ → / → zinT | inner membrane heme subunit for periplasmic YedYZ reductase/zinc and cadmium binding protein, periplasmic |
| RA | 2,044,721 | G→A | 8.2% | intergenic (+97/‑217) | asnT → / → yeeJ | tRNA‑Asn/putative adhesin |
| RA | 2,044,725 | T→A | 7.9% | intergenic (+101/‑213) | asnT → / → yeeJ | tRNA‑Asn/putative adhesin |
| RA | 2,044,727 | T→A | 8.3% | intergenic (+103/‑211) | asnT → / → yeeJ | tRNA‑Asn/putative adhesin |
| RA | 2,044,729 | T→A | 8.2% | intergenic (+105/‑209) | asnT → / → yeeJ | tRNA‑Asn/putative adhesin |
| RA | 2,044,733 | T→C | 8.4% | intergenic (+109/‑205) | asnT → / → yeeJ | tRNA‑Asn/putative adhesin |
| RA | 2,057,595 | T→C | 7.9% | intergenic (+21/+432) | yeeN → / ← asnW | UPF0082 family protein/tRNA‑Asn |
| RA | 2,057,597 | T→G | 7.8% | intergenic (+23/+430) | yeeN → / ← asnW | UPF0082 family protein/tRNA‑Asn |
| RA | 2,057,599 | T→A | 8.5% | intergenic (+25/+428) | yeeN → / ← asnW | UPF0082 family protein/tRNA‑Asn |
| RA | 2,057,601 | C→A | 7.7% | intergenic (+27/+426) | yeeN → / ← asnW | UPF0082 family protein/tRNA‑Asn |
| RA | 2,057,603 | G→A | 8.5% | intergenic (+29/+424) | yeeN → / ← asnW | UPF0082 family protein/tRNA‑Asn |
| RA | 2,062,354 | T→A | 9.7% | intergenic (+19/+37) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase linking Lpp to murein |
| RA | 2,062,355 | T→G | 9.8% | intergenic (+20/+36) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase linking Lpp to murein |
| RA | 2,062,356 | C→A | 9.9% | intergenic (+21/+35) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase linking Lpp to murein |
| RA | 2,062,357 | T→A | 10.1% | intergenic (+22/+34) | asnV → / ← ldtA | tRNA‑Asn/L,D‑transpeptidase linking Lpp to murein |
| RA | 2,068,407 | A→G | 9.4% | pseudogene (13/159 nt) | yoeH ← | pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,068,408 | T→A | 9.7% | pseudogene (12/159 nt) | yoeH ← | pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,068,409 | G→C | 9.4% | pseudogene (11/159 nt) | yoeH ← | pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,068,410 | T→A | 9.7% | pseudogene (10/159 nt) | yoeH ← | pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,068,411 | C→T | 9.4% | pseudogene (9/159 nt) | yoeH ← | pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,071,341 | T→A | 6.8% | noncoding (25/195 nt) | isrC → | novel sRNA, CP4‑44; putative prophage remnant |
| RA | 2,071,343 | T→A | 6.2% | noncoding (27/195 nt) | isrC → | novel sRNA, CP4‑44; putative prophage remnant |
| RA | 2,071,345 | T→A | 6.8% | noncoding (29/195 nt) | isrC → | novel sRNA, CP4‑44; putative prophage remnant |
| RA | 2,071,347 | T→A | 7.0% | noncoding (31/195 nt) | isrC → | novel sRNA, CP4‑44; putative prophage remnant |
| RA | 2,074,691 | C→G | 7.8% | intergenic (+33/‑88) | flu → / → yeeR | CP4‑44 prophage; antigen 43 (Ag43) phase‑variable biofilm formation autotransporter/CP4‑44 prophage; putative membrane protein |
| RA | 2,078,297 | Δ1 bp | 6.2% | intergenic (+190/+252) | yeeW → / ← yoeD | CP4‑44 prophage; uncharacterized protein;Phage or Prophage Related/pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,078,301 | A→T | 6.0% | intergenic (+194/+248) | yeeW → / ← yoeD | CP4‑44 prophage; uncharacterized protein;Phage or Prophage Related/pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,078,304 | A→T | 6.1% | intergenic (+197/+245) | yeeW → / ← yoeD | CP4‑44 prophage; uncharacterized protein;Phage or Prophage Related/pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,078,306:1 | +G | 6.3% | intergenic (+199/+243) | yeeW → / ← yoeD | CP4‑44 prophage; uncharacterized protein;Phage or Prophage Related/pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related |
| RA | 2,079,004 | G→C | 9.6% | intergenic (+73/+28) | yoeF → / ← yeeX | pseudogene, CP4‑44 putative prophage remnant;Phage or Prophage Related/UPF0265 family protein |
| RA | 2,081,688 | A→T | 14.4% | I287N (ATT→AAT) | dacD ← | D‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6b |
| RA | 2,089,198 | T→A | 6.1% | intergenic (‑70/+13) | yeeZ ← / ← yoeB | putative epimerase/toxin of the YoeB‑YefM toxin‑antitoxin system |
| RA | 2,090,122 | A→G | 5.3% | intergenic (+76/‑70) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| RA | 2,090,124 | C→G | 5.1% | intergenic (+78/‑68) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| RA | 2,090,126 | C→T | 5.7% | intergenic (+80/‑66) | hisL → / → hisG | his operon leader peptide/ATP phosphoribosyltransferase |
| RA | 2,093,965 | C→G | 7.9% | D166E (GAC→GAG) | hisB → | histidinol‑phosphatase and imidazoleglycerol‑phosphate dehydratase |
| RA | 2,115,847 | G→T | 6.0% | A17E (GCG→GAG) | wcaM ← | colanic acid biosynthesis protein |
| RA | 2,115,851 | A→C | 6.3% | S16A (TCG→GCG) | wcaM ← | colanic acid biosynthesis protein |
| RA | 2,121,583 | Δ1 bp | 7.7% | intergenic (‑29/+26) | wcaJ ← / ← cpsG | colanic biosynthesis UDP‑glucose lipid carrier transferase/phosphomannomutase |
| RA | 2,121,586 | G→C | 7.6% | intergenic (‑32/+23) | wcaJ ← / ← cpsG | colanic biosynthesis UDP‑glucose lipid carrier transferase/phosphomannomutase |
| RA | 2,121,588:1 | +C | 8.0% | intergenic (‑34/+21) | wcaJ ← / ← cpsG | colanic biosynthesis UDP‑glucose lipid carrier transferase/phosphomannomutase |
| RA | 2,123,637 | T→A | 5.8% | E295V (GAG→GTG) | cpsB ← | mannose‑1‑phosphate guanyltransferase |
| RA | 2,126,154 | A→T | 8.2% | I23I (ATT→ATA) ‡ | wcaH ← | GDP‑mannose mannosyl hydrolase |
| RA | 2,126,155 | A→T | 7.5% | I23N (ATT→AAT) ‡ | wcaH ← | GDP‑mannose mannosyl hydrolase |
| RA | 2,126,158 | A→T | 7.9% | F22Y (TTT→TAT) ‡ | wcaH ← | GDP‑mannose mannosyl hydrolase |
| RA | 2,126,159 | A→T | 7.2% | F22I (TTT→ATT) ‡ | wcaH ← | GDP‑mannose mannosyl hydrolase |
| RA | 2,133,447 | A→C | 6.2% | intergenic (‑50/+43) | wcaA ← / ← wzc | putative glycosyl transferase/colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase |
| RA | 2,133,453 | T→G | 6.5% | intergenic (‑56/+37) | wcaA ← / ← wzc | putative glycosyl transferase/colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase |
| RA | 2,133,454 | T→C | 6.6% | intergenic (‑57/+36) | wcaA ← / ← wzc | putative glycosyl transferase/colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase |
| RA | 2,139,716 | T→G | 6.3% | intergenic (+231/+43) | yegH → / ← asmA | inner membrane protein/suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane‑anchored periplasmic protein |
| RA | 2,139,718 | T→A | 6.3% | intergenic (+233/+41) | yegH → / ← asmA | inner membrane protein/suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane‑anchored periplasmic protein |
| RA | 2,139,720 | C→A | 6.4% | intergenic (+235/+39) | yegH → / ← asmA | inner membrane protein/suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane‑anchored periplasmic protein |
| RA | 2,140,320 | A→C | 5.7% | A431A (GCT→GCG) | asmA ← | suppressor of OmpF assembly mutants; putative outer membrane protein assembly factor; inner membrane‑anchored periplasmic protein |
| RA | 2,165,264 | A→G | 8.1% | T26A (ACT→GCT) ‡ | yegP → | UPF0339 family protein |
| RA | 2,165,265 | C→A | 8.0% | T26N (ACT→AAT) ‡ | yegP → | UPF0339 family protein |
| RA | 2,165,268 | T→G | 8.0% | I27S (ATC→AGC) ‡ | yegP → | UPF0339 family protein |
| RA | 2,165,269 | C→T | 8.0% | I27I (ATC→ATT) ‡ | yegP → | UPF0339 family protein |
| RA | 2,167,278 | G→A | 6.6% | intergenic (+78/+24) | cyaR → / ← ogrK | sRNA antisense regulator of ompX mRNA instability, Hfq‑dependent, cAMP‑induced/orphan Ogr protein, positive regulator of P2 growth |
| RA | 2,167,279 | A→G | 6.6% | intergenic (+79/+23) | cyaR → / ← ogrK | sRNA antisense regulator of ompX mRNA instability, Hfq‑dependent, cAMP‑induced/orphan Ogr protein, positive regulator of P2 growth |
| RA | 2,167,280 | C→T | 6.4% | intergenic (+80/+22) | cyaR → / ← ogrK | sRNA antisense regulator of ompX mRNA instability, Hfq‑dependent, cAMP‑induced/orphan Ogr protein, positive regulator of P2 growth |
| RA | 2,167,281 | T→C | 6.4% | intergenic (+81/+21) | cyaR → / ← ogrK | sRNA antisense regulator of ompX mRNA instability, Hfq‑dependent, cAMP‑induced/orphan Ogr protein, positive regulator of P2 growth |
| RA | 2,167,915 | C→A | 5.4% | intergenic (‑101/+74) | yegZ ← / ← yegR | pseudogene, gpD phage P2‑like protein D/uncharacterized protein |
| RA | 2,168,420 | A→T | 6.2% | intergenic (‑114/‑292) | yegR ← / → yegS | uncharacterized protein/phosphatidylglycerol kinase, metal‑dependent |
| RA | 2,168,423 | A→T | 6.2% | intergenic (‑117/‑289) | yegR ← / → yegS | uncharacterized protein/phosphatidylglycerol kinase, metal‑dependent |
| RA | 2,173,361 | Δ2 bp | 100% | pseudogene (1‑2/442 nt) | gatC ← | pseudogene, galactitol‑specific enzyme IIC component of PTS;transport; Transport of small molecules: Carbohydrates, organic acids, alcohols; PTS system galactitol‑specific enzyme IIC |
| RA | 2,181,277 | T→A | 5.3% | V61E (GTG→GAG) | yegV → | putative kinase |
| RA | 2,181,282 | T→C | 5.6% | L63L (TTA→CTA) ‡ | yegV → | putative kinase |
| RA | 2,181,284 | A→T | 5.3% | L63F (TTA→TTT) ‡ | yegV → | putative kinase |
| RA | 2,181,285 | A→T | 5.3% | K64* (AAG→TAG) ‡ | yegV → | putative kinase |
| RA | 2,181,287 | G→A | 5.3% | K64K (AAG→AAA) ‡ | yegV → | putative kinase |
| RA | 2,181,292 | T→A | 5.3% | L66H (CTC→CAC) | yegV → | putative kinase |
| RA | 2,211,186 | G→C | 6.5% | intergenic (+86/‑39) | yehQ → / → yehR | pseudogene/lipoprotein, DUF1307 family |
| RA | 2,211,187 | A→T | 7.0% | intergenic (+87/‑38) | yehQ → / → yehR | pseudogene/lipoprotein, DUF1307 family |
| RA | 2,211,188 | G→C | 6.7% | intergenic (+88/‑37) | yehQ → / → yehR | pseudogene/lipoprotein, DUF1307 family |
| RA | 2,211,705 | C→T | 5.4% | intergenic (+19/+21) | yehR → / ← yehS | lipoprotein, DUF1307 family/DUF1456 family protein |
| RA | 2,211,706 | T→A | 5.4% | intergenic (+20/+20) | yehR → / ← yehS | lipoprotein, DUF1307 family/DUF1456 family protein |
| RA | 2,211,707 | A→G | 5.1% | intergenic (+21/+19) | yehR → / ← yehS | lipoprotein, DUF1307 family/DUF1456 family protein |
| RA | 2,211,709 | A→G | 5.1% | intergenic (+23/+17) | yehR → / ← yehS | lipoprotein, DUF1307 family/DUF1456 family protein |
| RA | 2,230,416 | G→C | 5.0% | intergenic (‑31/‑208) | dusC ← / → yohJ | tRNA‑dihydrouridine synthase C/UPF0299 family inner membrane protein |
| RA | 2,242,884 | T→G | 10.1% | L28L (CTA→CTC) ‡ | yeiB ← | DUF418 family putative inner membrane protein |
| RA | 2,242,885 | A→C | 9.6% | L28R (CTA→CGA) ‡ | yeiB ← | DUF418 family putative inner membrane protein |
| RA | 2,242,886 | G→T | 9.2% | L28I (CTA→ATA) ‡ | yeiB ← | DUF418 family putative inner membrane protein |
| RA | 2,242,887 | C→A | 8.9% | G27G (GGG→GGT) | yeiB ← | DUF418 family putative inner membrane protein |
| RA | 2,247,030 | G→A | 7.3% | intergenic (‑261/+33) | cirA ← / ← lysP | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter |
| RA | 2,247,031 | G→A | 7.4% | intergenic (‑262/+32) | cirA ← / ← lysP | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter |
| RA | 2,247,032 | T→C | 7.5% | intergenic (‑263/+31) | cirA ← / ← lysP | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter |
| RA | 2,247,033 | T→C | 7.4% | intergenic (‑264/+30) | cirA ← / ← lysP | colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter/lysine transporter |
| RA | 2,255,991 | A→T | 6.4% | K213* (AAA→TAA) ‡ | yeiL → | putative transcriptional regulator |
| RA | 2,255,992 | A→T | 6.3% | K213I (AAA→ATA) ‡ | yeiL → | putative transcriptional regulator |
| RA | 2,259,549 | A→T | 5.2% | intergenic (‑253/+170) | psuK ← / ← fruA | pseudouridine kinase/fused fructose‑specific PTS enzymes: IIBcomponent/IIC components |
| RA | 2,259,550 | A→T | 5.8% | intergenic (‑254/+169) | psuK ← / ← fruA | pseudouridine kinase/fused fructose‑specific PTS enzymes: IIBcomponent/IIC components |
| RA | 2,259,554 | A→T | 5.8% | intergenic (‑258/+165) | psuK ← / ← fruA | pseudouridine kinase/fused fructose‑specific PTS enzymes: IIBcomponent/IIC components |
| RA | 2,259,693 | A→T | 5.7% | intergenic (‑397/+26) | psuK ← / ← fruA | pseudouridine kinase/fused fructose‑specific PTS enzymes: IIBcomponent/IIC components |
| RA | 2,259,696 | T→C | 5.4% | intergenic (‑400/+23) | psuK ← / ← fruA | pseudouridine kinase/fused fructose‑specific PTS enzymes: IIBcomponent/IIC components |
| RA | 2,259,700 | C→T | 5.2% | intergenic (‑404/+19) | psuK ← / ← fruA | pseudouridine kinase/fused fructose‑specific PTS enzymes: IIBcomponent/IIC components |
| RA | 2,263,235 | C→T | 6.4% | W87* (TGG→TGA) ‡ | fruB ← | fused fructose‑specific PTS enzymes: IIA component/HPr component |
| RA | 2,263,236 | C→G | 6.4% | W87S (TGG→TCG) ‡ | fruB ← | fused fructose‑specific PTS enzymes: IIA component/HPr component |
| RA | 2,263,237 | A→G | 6.2% | W87R (TGG→CGG) ‡ | fruB ← | fused fructose‑specific PTS enzymes: IIA component/HPr component |
| RA | 2,267,734 | T→C | 5.9% | intergenic (+23/‑95) | yeiQ → / → yeiR | putative NAD‑dependent D‑mannonate oxidoreductase/Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,267,739 | C→G | 5.8% | intergenic (+28/‑90) | yeiQ → / → yeiR | putative NAD‑dependent D‑mannonate oxidoreductase/Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,267,741 | C→G | 5.7% | intergenic (+30/‑88) | yeiQ → / → yeiR | putative NAD‑dependent D‑mannonate oxidoreductase/Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,267,743 | C→G | 5.7% | intergenic (+32/‑86) | yeiQ → / → yeiR | putative NAD‑dependent D‑mannonate oxidoreductase/Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,267,748 | G→A | 5.6% | intergenic (+37/‑81) | yeiQ → / → yeiR | putative NAD‑dependent D‑mannonate oxidoreductase/Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,268,132 | C→G | 6.1% | L102V (CTC→GTC) ‡ | yeiR → | Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,268,134 | C→G | 5.2% | L102L (CTC→CTG) ‡ | yeiR → | Zn‑stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein |
| RA | 2,270,602 | T→C | 6.5% | intergenic (+57/‑124) | mepS → / → rtn | murein DD‑endopeptidase, space‑maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD‑carboxypeptidase/resistance protein for phages lambda and N4, putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 2,270,605 | G→A | 6.4% | intergenic (+60/‑121) | mepS → / → rtn | murein DD‑endopeptidase, space‑maker hydrolase, mutational suppressor of prc thermosensitivity, outer membrane lipoprotein, weak murein LD‑carboxypeptidase/resistance protein for phages lambda and N4, putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 2,279,422 | A→G | 8.8% | A113A (GCT→GCC) | bcr ← | bicyclomycin/cysteine/sulfonamide efflux transporter |
| RA | 2,279,425 | C→T | 7.3% | A112A (GCG→GCA) | bcr ← | bicyclomycin/cysteine/sulfonamide efflux transporter |
| RA | 2,282,830 | T→C | 10.9% | intergenic (+29/+110) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,831 | C→G | 12.0% | intergenic (+30/+109) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,832 | C→G | 12.0% | intergenic (+31/+108) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,833 | G→A | 11.4% | intergenic (+32/+107) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,898 | A→G | 8.1% | intergenic (+97/+42) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,899 | A→C | 8.7% | intergenic (+98/+41) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,905 | T→G | 6.7% | intergenic (+104/+35) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,906 | C→A | 7.1% | intergenic (+105/+34) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,912 | G→T | 7.0% | intergenic (+111/+28) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,282,913 | C→T | 7.1% | intergenic (+112/+27) | rplY → / ← yejK | 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein |
| RA | 2,285,234 | G→C | 5.3% | E287Q (GAG→CAG) | yejM → | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor |
| RA | 2,286,139 | A→T | 7.4% | intergenic (+3/‑72) | yejM → / → proL | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro |
| RA | 2,286,142 | T→A | 7.0% | intergenic (+6/‑69) | yejM → / → proL | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro |
| RA | 2,286,145 | A→T | 7.6% | intergenic (+9/‑66) | yejM → / → proL | essential inner membrane DUF3413 domain‑containing protein; lipid A production and membrane permeability factor/tRNA‑Pro |
| RA | 2,286,311 | C→G | 6.8% | intergenic (+24/+79) | proL → / ← yejO | tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| RA | 2,286,313 | T→A | 7.4% | intergenic (+26/+77) | proL → / ← yejO | tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| RA | 2,286,315 | C→G | 6.4% | intergenic (+28/+75) | proL → / ← yejO | tRNA‑Pro/pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| RA | 2,286,917 | C→T | 5.7% | pseudogene (1998/2525 nt) | yejO ← | pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| RA | 2,311,616 | C→T | 8.3% | intergenic (‑82/+30) | apbE ← / ← ompC | putative thiamine‑synthetic flavin transferase lipoprotein/outer membrane porin protein C |
| RA | 2,311,619 | A→G | 8.0% | intergenic (‑85/+27) | apbE ← / ← ompC | putative thiamine‑synthetic flavin transferase lipoprotein/outer membrane porin protein C |
| RA | 2,313,159 | T→A | 5.2% | noncoding (76/93 nt) | micF → | sRNA antisense regulator affecting ompF expression, Hfq‑dependent |
| RA | 2,314,800 | A→C | 7.4% | Q438P (CAG→CCG) ‡ | rcsD → | phosphotransfer intermediate protein in two‑component regulatory system with RcsBC |
| RA | 2,314,801 | G→T | 7.5% | Q438H (CAG→CAT) ‡ | rcsD → | phosphotransfer intermediate protein in two‑component regulatory system with RcsBC |
| RA | 2,316,890 | G→A | 5.2% | intergenic (+63/+137) | rcsB → / ← rcsC | response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,316,891 | C→A | 5.9% | intergenic (+64/+136) | rcsB → / ← rcsC | response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,316,897 | A→T | 7.0% | intergenic (+70/+130) | rcsB → / ← rcsC | response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,316,898 | A→T | 6.3% | intergenic (+71/+129) | rcsB → / ← rcsC | response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,316,904 | T→G | 6.3% | intergenic (+77/+123) | rcsB → / ← rcsC | response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,316,905 | T→C | 6.3% | intergenic (+78/+122) | rcsB → / ← rcsC | response regulator in two‑component regulatory system with RcsC and YojN/hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,319,581 | A→G | 13.8% | V99A (GTG→GCG) ‡ | rcsC ← | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,319,582 | C→G | 13.5% | V99L (GTG→CTG) ‡ | rcsC ← | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,319,585 | C→G | 13.3% | D98H (GAT→CAT) | rcsC ← | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,319,586 | C→T | 13.2% | A97A (GCG→GCA) | rcsC ← | hybrid sensory kinase in two‑component regulatory system with RcsB and YojN |
| RA | 2,325,037:1 | +T | 6.0% | coding (282/1323 nt) | atoE → | short chain fatty acid transporter |
| RA | 2,325,042 | Δ1 bp | 5.9% | coding (287/1323 nt) | atoE → | short chain fatty acid transporter |
| RA | 2,329,708 | A→G | 5.4% | G30G (GGT→GGC) ‡ | yfaQ ← | tandem DUF2300 domain protein, putative host defense protein |
| RA | 2,329,709 | C→G | 5.4% | G30A (GGT→GCT) ‡ | yfaQ ← | tandem DUF2300 domain protein, putative host defense protein |
| RA | 2,356,734 | G→C | 11.0% | intergenic (+23/‑170) | glpC → / → yfaD | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, C subunit, 4Fe‑4S iron‑sulfur cluster/transposase_31 family protein |
| RA | 2,356,737 | T→C | 10.0% | intergenic (+26/‑167) | glpC → / → yfaD | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, C subunit, 4Fe‑4S iron‑sulfur cluster/transposase_31 family protein |
| RA | 2,356,738 | G→A | 9.9% | intergenic (+27/‑166) | glpC → / → yfaD | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, C subunit, 4Fe‑4S iron‑sulfur cluster/transposase_31 family protein |
| RA | 2,356,741 | G→C | 10.1% | intergenic (+30/‑163) | glpC → / → yfaD | anaerobic sn‑glycerol‑3‑phosphate dehydrogenase, C subunit, 4Fe‑4S iron‑sulfur cluster/transposase_31 family protein |
| JC JC | 2,375,828 | IS186 (+) +4 bp | 100% | coding (132‑135/963 nt) | menC ← | O‑succinylbenzoyl‑CoA synthase |
| RA | 2,383,956 | A→T | 6.5% | intergenic (+32/+39) | elaD → / ← yfbK | protease, capable of cleaving an AMC‑ubiquitin model substrate/Von Willebrand factor domain putative lipoprotein |
| RA | 2,383,959 | A→T | 7.1% | intergenic (+35/+36) | elaD → / ← yfbK | protease, capable of cleaving an AMC‑ubiquitin model substrate/Von Willebrand factor domain putative lipoprotein |
| RA | 2,387,592 | T→A | 5.3% | intergenic (+155/+118) | yfbM → / ← yfbN | DUF1877 family protein/uncharacterized protein |
| RA | 2,390,012 | Δ1 bp | 5.9% | intergenic (+48/+36) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| RA | 2,390,016:1 | +C | 5.8% | intergenic (+52/+32) | yfbP → / ← nuoN | TPR‑like repeats‑containing protein/NADH:ubiquinone oxidoreductase, membrane subunit N |
| RA | 2,391,414 | C→G | 6.7% | R31P (CGA→CCA) | nuoN ← | NADH:ubiquinone oxidoreductase, membrane subunit N |
| RA | 2,391,417 | C→G | 6.7% | W30S (TGG→TCG) | nuoN ← | NADH:ubiquinone oxidoreductase, membrane subunit N |
| RA | 2,399,876 | G→A | 7.5% | T97I (ACC→ATC) | nuoG ← | NADH:ubiquinone oxidoreductase, chain G |
| RA | 2,399,878 | C→G | 7.0% | M96I (ATG→ATC) ‡ | nuoG ← | NADH:ubiquinone oxidoreductase, chain G |
| RA | 2,399,880 | T→C | 7.4% | M96V (ATG→GTG) ‡ | nuoG ← | NADH:ubiquinone oxidoreductase, chain G |
| RA | 2,412,639 | T→A | 6.7% | intergenic (‑45/+38) | yfbU ← / ← yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| RA | 2,412,640 | G→T | 6.2% | intergenic (‑46/+37) | yfbU ← / ← yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| RA | 2,412,642 | G→C | 6.9% | intergenic (‑48/+35) | yfbU ← / ← yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| RA | 2,412,644 | A→C | 6.9% | intergenic (‑50/+33) | yfbU ← / ← yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| RA | 2,412,645 | T→A | 6.3% | intergenic (‑51/+32) | yfbU ← / ← yfbV | UPF0304 family protein/UPF0208 family inner membrane protein |
| RA | 2,414,689 | C→G | 6.3% | intergenic (+17/‑58) | ackA → / → pta | acetate kinase A and propionate kinase 2/phosphate acetyltransferase |
| RA | 2,417,340 | A→T | 6.6% | D87V (GAT→GTT) | yfcC → | putative inner membrane transporter; C4‑dicarboxylate anaerobic carrier family protein |
| RA | 2,417,342 | G→C | 6.6% | E88Q (GAA→CAA) ‡ | yfcC → | putative inner membrane transporter; C4‑dicarboxylate anaerobic carrier family protein |
| RA | 2,417,344 | A→T | 6.7% | E88D (GAA→GAT) ‡ | yfcC → | putative inner membrane transporter; C4‑dicarboxylate anaerobic carrier family protein |
| RA | 2,428,038 | A→T | 6.3% | intergenic (‑247/+19) | argT ← / ← ubiX | lysine/arginine/ornithine transporter subunit/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase |
| RA | 2,428,039 | A→T | 6.3% | intergenic (‑248/+18) | argT ← / ← ubiX | lysine/arginine/ornithine transporter subunit/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase |
| RA | 2,428,040 | A→T | 6.5% | intergenic (‑249/+17) | argT ← / ← ubiX | lysine/arginine/ornithine transporter subunit/3‑octaprenyl‑4‑hydroxybenzoate carboxy‑lyase |
| RA | 2,430,937 | C→A | 5.5% | intergenic (‑174/+85) | cvpA ← / ← dedD | colicin V production protein/membrane‑anchored periplasmic protein involved in septation |
| RA | 2,430,943 | A→T | 7.6% | intergenic (‑180/+79) | cvpA ← / ← dedD | colicin V production protein/membrane‑anchored periplasmic protein involved in septation |
| RA | 2,430,944 | A→T | 6.7% | intergenic (‑181/+78) | cvpA ← / ← dedD | colicin V production protein/membrane‑anchored periplasmic protein involved in septation |
| RA | 2,430,950 | T→G | 6.3% | intergenic (‑187/+72) | cvpA ← / ← dedD | colicin V production protein/membrane‑anchored periplasmic protein involved in septation |
| RA | 2,430,951 | T→C | 6.8% | intergenic (‑188/+71) | cvpA ← / ← dedD | colicin V production protein/membrane‑anchored periplasmic protein involved in septation |
| RA | 2,438,862 | A→G | 6.7% | T305A (ACG→GCG) | flk → | putative flagella assembly protein |
| RA | 2,438,869 | A→C | 7.1% | Q307P (CAA→CCA) | flk → | putative flagella assembly protein |
| RA | 2,438,871 | A→T | 7.5% | N308Y (AAT→TAT) | flk → | putative flagella assembly protein |
| RA | 2,438,874 | A→T | 8.0% | M309L (ATG→TTG) ‡ | flk → | putative flagella assembly protein |
| RA | 2,438,876 | G→T | 7.6% | M309I (ATG→ATT) ‡ | flk → | putative flagella assembly protein |
| RA | 2,438,883 | C→T | 8.1% | R312C (CGT→TGT) | flk → | putative flagella assembly protein |
| RA | 2,440,295 | A→T | 7.8% | intergenic (‑175/+90) | yfcJ ← / ← fabB | putative arabinose efflux transporter/3‑oxoacyl‑[acyl‑carrier‑protein] synthase I |
| RA | 2,440,296 | T→G | 7.7% | intergenic (‑176/+89) | yfcJ ← / ← fabB | putative arabinose efflux transporter/3‑oxoacyl‑[acyl‑carrier‑protein] synthase I |
| RA | 2,440,297 | C→A | 7.5% | intergenic (‑177/+88) | yfcJ ← / ← fabB | putative arabinose efflux transporter/3‑oxoacyl‑[acyl‑carrier‑protein] synthase I |
| RA | 2,440,298 | A→T | 7.5% | intergenic (‑178/+87) | yfcJ ← / ← fabB | putative arabinose efflux transporter/3‑oxoacyl‑[acyl‑carrier‑protein] synthase I |
| RA | 2,441,661 | C→A | 5.9% | intergenic (‑56/‑103) | fabB ← / → mnmC | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase I/fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| RA | 2,441,662 | T→G | 5.8% | intergenic (‑57/‑102) | fabB ← / → mnmC | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase I/fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| RA | 2,446,443 | A→G | 6.3% | L344P (CTG→CCG) | aroC ← | chorismate synthase |
| RA | 2,449,200 | G→A | 5.9% | intergenic (+43/+28) | smrB → / ← yfcO | putative DNA endonuclease/DUF2544 family putative outer membrane protein |
| RA | 2,449,201 | A→T | 5.9% | intergenic (+44/+27) | smrB → / ← yfcO | putative DNA endonuclease/DUF2544 family putative outer membrane protein |
| RA | 2,449,202 | A→T | 5.9% | intergenic (+45/+26) | smrB → / ← yfcO | putative DNA endonuclease/DUF2544 family putative outer membrane protein |
| RA | 2,449,203 | T→C | 5.9% | intergenic (+46/+25) | smrB → / ← yfcO | putative DNA endonuclease/DUF2544 family putative outer membrane protein |
| RA | 2,449,607:1 | +G | 7.0% | coding (443/822 nt) | yfcO ← | DUF2544 family putative outer membrane protein |
| RA | 2,449,615 | C→G | 9.9% | G145G (GGG→GGC) ‡ | yfcO ← | DUF2544 family putative outer membrane protein |
| RA | 2,449,616 | C→G | 9.0% | G145A (GGG→GCG) ‡ | yfcO ← | DUF2544 family putative outer membrane protein |
| RA | 2,449,624 | Δ1 bp | 7.7% | coding (426/822 nt) | yfcO ← | DUF2544 family putative outer membrane protein |
| RA | 2,460,614 | C→T | 7.3% | intergenic (‑145/+36) | fadI ← / ← yfcZ | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein |
| RA | 2,460,618 | C→T | 6.4% | intergenic (‑149/+32) | fadI ← / ← yfcZ | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein |
| RA | 2,460,619 | A→T | 6.5% | intergenic (‑150/+31) | fadI ← / ← yfcZ | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein |
| RA | 2,460,620 | A→G | 6.5% | intergenic (‑151/+30) | fadI ← / ← yfcZ | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein |
| RA | 2,460,624 | A→G | 7.3% | intergenic (‑155/+26) | fadI ← / ← yfcZ | beta‑ketoacyl‑CoA thiolase, anaerobic, subunit/UPF0381 family protein |
| RA | 2,462,677 | A→T | 5.6% | intergenic (+31/‑335) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| RA | 2,462,678 | T→A | 5.6% | intergenic (+32/‑334) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| RA | 2,462,679 | A→T | 6.3% | intergenic (+33/‑333) | fadL → / → yfdF | long‑chain fatty acid outer membrane transporter/uncharacterized protein |
| RA | 2,470,480 | A→T | 6.1% | intergenic (+18/‑335) | gtrS → / → tfaS | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related |
| RA | 2,470,481 | T→G | 5.4% | intergenic (+19/‑334) | gtrS → / → tfaS | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related |
| RA | 2,470,482 | C→A | 5.6% | intergenic (+20/‑333) | gtrS → / → tfaS | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related |
| RA | 2,470,483 | A→T | 5.7% | intergenic (+21/‑332) | gtrS → / → tfaS | serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage/pseudogene, CPS‑53 (KpLE1) prophage; tail fiber assembly protein fragment;Phage or Prophage Related |
| RA | 2,477,014 | C→A | 12.0% | A206S (GCA→TCA) | dsdC ← | dsd operon activator; autorepressor |
| RA | 2,477,016 | T→A | 17.4% | Q205L (CAG→CTG) | dsdC ← | dsd operon activator; autorepressor |
| RA | 2,477,018 | T→A | 15.8% | R204S (AGA→AGT) ‡ | dsdC ← | dsd operon activator; autorepressor |
| RA | 2,477,020 | T→A | 14.1% | R204* (AGA→TGA) ‡ | dsdC ← | dsd operon activator; autorepressor |
| RA | 2,477,022 | T→G | 13.7% | D203A (GAC→GCC) | dsdC ← | dsd operon activator; autorepressor |
| RA | 2,477,877 | C→A | 5.4% | L11M (CTG→ATG) | dsdX → | D‑serine transporter |
| RA | 2,477,882 | T→G | 5.7% | L12L (CTT→CTG) | dsdX → | D‑serine transporter |
| RA | 2,477,885 | C→A | 5.1% | I13I (ATC→ATA) | dsdX → | D‑serine transporter |
| RA | 2,477,890 | T→G | 5.3% | I15S (ATC→AGC) | dsdX → | D‑serine transporter |
| RA | 2,482,839 | C→G | 10.0% | L167F (TTG→TTC) | emrK ← | multidrug resistance efflux pump membrane fusion protein |
| RA | 2,491,264 | T→A | 5.6% | E229D (GAA→GAT) | oxc ← | oxalyl CoA decarboxylase, ThDP‑dependent |
| RA | 2,511,417 | A→G | 5.5% | intergenic (+90/+51) | ypeC → / ← mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| RA | 2,511,418 | A→C | 5.5% | intergenic (+91/+50) | ypeC → / ← mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| RA | 2,511,424 | T→A | 6.5% | intergenic (+97/+44) | ypeC → / ← mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| RA | 2,511,431 | G→T | 5.6% | intergenic (+104/+37) | ypeC → / ← mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| RA | 2,511,432 | C→T | 6.0% | intergenic (+105/+36) | ypeC → / ← mntH | DUF2502 family putative periplasmic protein/manganese/divalent cation transporter |
| RA | 2,519,222 | T→G | 5.3% | intergenic (+17/+35) | yfeD → / ← gltX | DUF1323 family putative DNA‑binding protein/glutamyl‑tRNA synthetase |
| RA | 2,519,225 | T→A | 6.1% | intergenic (+20/+32) | yfeD → / ← gltX | DUF1323 family putative DNA‑binding protein/glutamyl‑tRNA synthetase |
| RA | 2,519,228 | C→A | 5.7% | intergenic (+23/+29) | yfeD → / ← gltX | DUF1323 family putative DNA‑binding protein/glutamyl‑tRNA synthetase |
| RA | 2,525,907 | G→A | 6.2% | intergenic (+16/+23) | yfeN → / ← yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| RA | 2,525,908 | C→G | 5.9% | intergenic (+17/+22) | yfeN → / ← yfeR | putative outer membrane protein/transcriptional regulator of yefH |
| RA | 2,526,240 | A→G | 6.5% | I206T (ATT→ACT) ‡ | yfeR ← | transcriptional regulator of yefH |
| RA | 2,526,241 | T→G | 6.1% | I206L (ATT→CTT) ‡ | yfeR ← | transcriptional regulator of yefH |
| RA | 2,526,246 | G→C | 6.4% | P204R (CCG→CGG) | yfeR ← | transcriptional regulator of yefH |
| RA | 2,526,248 | T→A | 6.3% | R203R (CGA→CGT) ‡ | yfeR ← | transcriptional regulator of yefH |
| RA | 2,526,250 | G→C | 7.4% | R203G (CGA→GGA) ‡ | yfeR ← | transcriptional regulator of yefH |
| RA | 2,526,255 | C→A | 6.4% | G201V (GGC→GTC) ‡ | yfeR ← | transcriptional regulator of yefH |
| RA | 2,526,256 | C→T | 6.3% | G201S (GGC→AGC) ‡ | yfeR ← | transcriptional regulator of yefH |
| RA | 2,533,415 | T→A | 6.2% | intergenic (+35/‑349) | cysK → / → ptsH | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr) |
| RA | 2,533,416 | T→A | 6.6% | intergenic (+36/‑348) | cysK → / → ptsH | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr) |
| RA | 2,533,417 | T→A | 6.6% | intergenic (+37/‑347) | cysK → / → ptsH | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr) |
| RA | 2,533,418 | T→A | 7.0% | intergenic (+38/‑346) | cysK → / → ptsH | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit/phosphohistidinoprotein‑hexose phosphotransferase component of PTS system (Hpr) |
| RA | 2,536,370 | C→G | 7.8% | intergenic (+27/+16) | crr → / ← pdxK | glucose‑specific enzyme IIA component of PTS/pyridoxal‑pyridoxamine kinase/hydroxymethylpyrimidine kinase |
| RA | 2,536,373 | C→G | 7.6% | intergenic (+30/+13) | crr → / ← pdxK | glucose‑specific enzyme IIA component of PTS/pyridoxal‑pyridoxamine kinase/hydroxymethylpyrimidine kinase |
| RA | 2,538,556 | T→G | 6.4% | intergenic (+73/+116) | yfeS → / ← cysM | WGR domain protein/cysteine synthase B (O‑acetylserine sulfhydrolase B) |
| RA | 2,538,557 | T→C | 5.8% | intergenic (+74/+115) | yfeS → / ← cysM | WGR domain protein/cysteine synthase B (O‑acetylserine sulfhydrolase B) |
| RA | 2,538,737 | C→G | 5.3% | G283R (GGC→CGC) | cysM ← | cysteine synthase B (O‑acetylserine sulfhydrolase B) |
| RA | 2,542,928 | C→T | 6.4% | A201T (GCG→ACG) | cysP ← | thiosulfate‑binding protein |
| RA | 2,542,930 | C→G | 7.0% | G200A (GGC→GCC) | cysP ← | thiosulfate‑binding protein |
| RA | 2,542,932 | A→G | 7.9% | R199R (CGT→CGC) | cysP ← | thiosulfate‑binding protein |
| RA | 2,549,555 | G→T | 6.8% | intergenic (+149/+91) | yfeW → / ← yfeX | penicillin binding protein PBP4B; weak DD‑carboxypeptidase activity/porphyrinogen oxidase, cytoplasmic |
| RA | 2,560,985 | C→A | 15.7% | intergenic (+87/‑383) | yffL → / → yffM | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| RA | 2,560,996 | G→T | 20.3% | intergenic (+98/‑372) | yffL → / → yffM | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| RA | 2,566,267 | T→G | 5.5% | A206A (GCA→GCC) | eutA ← | reactivating factor for ethanolamine ammonia lyase |
| RA | 2,568,246 | G→A | 5.5% | intergenic (‑139/+78) | eutH ← / ← eutG | ethanolamine transporter/ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase |
| RA | 2,568,253 | G→T | 6.9% | intergenic (‑146/+71) | eutH ← / ← eutG | ethanolamine transporter/ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase |
| RA | 2,568,254 | A→C | 8.1% | intergenic (‑147/+70) | eutH ← / ← eutG | ethanolamine transporter/ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase |
| RA | 2,568,260 | T→G | 7.7% | intergenic (‑153/+64) | eutH ← / ← eutG | ethanolamine transporter/ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase |
| RA | 2,568,261 | T→C | 5.7% | intergenic (‑154/+63) | eutH ← / ← eutG | ethanolamine transporter/ethanol dehydrogenase involved in ethanolamine utilization; aldehyde reductase |
| RA | 2,581,678 | A→C | 6.4% | intergenic (+39/+56) | tktB → / ← ypfG | transketolase 2, thiamine triphosphate‑binding/DUF1176 family protein |
| RA | 2,589,122 | G→A | 9.4% | G510S (GGC→AGC) | acrD → | aminoglycoside/multidrug efflux system |
| RA | 2,589,125 | T→C | 9.4% | F511L (TTT→CTT) | acrD → | aminoglycoside/multidrug efflux system |
| RA | 2,612,823 | T→C | 6.4% | A308A (GCT→GCC) | hyfR → | hydrogenase‑4 transcriptional activator |
| RA | 2,612,830 | G→A | 6.5% | V311I (GTT→ATT) ‡ | hyfR → | hydrogenase‑4 transcriptional activator |
| RA | 2,612,831 | T→A | 7.1% | V311D (GTT→GAT) ‡ | hyfR → | hydrogenase‑4 transcriptional activator |
| RA | 2,612,832 | T→C | 6.6% | V311V (GTT→GTC) ‡ | hyfR → | hydrogenase‑4 transcriptional activator |
| RA | 2,612,839 | G→A | 6.5% | A314T (GCC→ACC) ‡ | hyfR → | hydrogenase‑4 transcriptional activator |
| RA | 2,612,840 | C→G | 6.7% | A314G (GCC→GGC) ‡ | hyfR → | hydrogenase‑4 transcriptional activator |
| RA | 2,620,216 | C→T | 8.9% | intergenic (‑56/+30) | uraA ← / ← upp | uracil permease/uracil phosphoribosyltransferase |
| RA | 2,620,218 | T→A | 8.9% | intergenic (‑58/+28) | uraA ← / ← upp | uracil permease/uracil phosphoribosyltransferase |
| RA | 2,620,220 | A→G | 9.0% | intergenic (‑60/+26) | uraA ← / ← upp | uracil permease/uracil phosphoribosyltransferase |
| RA | 2,630,918 | A→T | 5.2% | intergenic (+53/+40) | yfgI → / ← guaA | nalidixic acid resistance protein, putative periplasmic protein/GMP synthetase (glutamine aminotransferase) |
| RA | 2,632,584 | A→T | 5.1% | intergenic (‑49/+20) | guaA ← / ← guaB | GMP synthetase (glutamine aminotransferase)/IMP dehydrogenase |
| RA | 2,632,586 | G→C | 6.1% | intergenic (‑51/+18) | guaA ← / ← guaB | GMP synthetase (glutamine aminotransferase)/IMP dehydrogenase |
| RA | 2,632,588 | A→T | 5.7% | intergenic (‑53/+16) | guaA ← / ← guaB | GMP synthetase (glutamine aminotransferase)/IMP dehydrogenase |
| RA | 2,640,666 | A→C | 5.5% | intergenic (‑91/+20) | hisS ← / ← ispG | histidyl tRNA synthetase/1‑hydroxy‑2‑methyl‑2‑(E)‑butenyl 4‑diphosphate synthase |
| RA | 2,640,667 | G→C | 5.7% | intergenic (‑92/+19) | hisS ← / ← ispG | histidyl tRNA synthetase/1‑hydroxy‑2‑methyl‑2‑(E)‑butenyl 4‑diphosphate synthase |
| RA | 2,640,668 | G→T | 5.7% | intergenic (‑93/+18) | hisS ← / ← ispG | histidyl tRNA synthetase/1‑hydroxy‑2‑methyl‑2‑(E)‑butenyl 4‑diphosphate synthase |
| RA | 2,653,367 | G→A | 6.0% | intergenic (+28/‑488) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,653,372 | T→C | 6.1% | intergenic (+33/‑483) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,653,692 | A→T | 8.1% | intergenic (+353/‑163) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,653,693 | A→G | 8.1% | intergenic (+354/‑162) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,653,695 | A→T | 8.0% | intergenic (+356/‑160) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,653,697 | C→T | 8.0% | intergenic (+358/‑158) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,653,698 | A→T | 8.0% | intergenic (+359/‑157) | sseA → / → ryfA | 3‑mercaptopyruvate sulfurtransferase/novel sRNA, function unknown |
| RA | 2,654,142 | T→A | 9.0% | noncoding (288/304 nt) | ryfA → | novel sRNA, function unknown |
| RA | 2,654,143 | T→A | 9.4% | noncoding (289/304 nt) | ryfA → | novel sRNA, function unknown |
| RA | 2,654,144 | T→A | 9.4% | noncoding (290/304 nt) | ryfA → | novel sRNA, function unknown |
| RA | 2,657,426 | G→A | 6.0% | L504L (CTG→TTG) | hscA ← | DnaK‑like molecular chaperone specific for IscU |
| RA | 2,657,432 | A→C | 5.9% | Y502D (TAC→GAC) | hscA ← | DnaK‑like molecular chaperone specific for IscU |
| RA | 2,657,433 | A→T | 6.9% | S501S (TCT→TCA) ‡ | hscA ← | DnaK‑like molecular chaperone specific for IscU |
| RA | 2,657,434 | G→T | 5.9% | S501Y (TCT→TAT) ‡ | hscA ← | DnaK‑like molecular chaperone specific for IscU |
| RA | 2,657,440 | T→C | 6.2% | K499R (AAA→AGA) | hscA ← | DnaK‑like molecular chaperone specific for IscU |
| RA | 2,660,611 | G→T | 11.4% | Y307* (TAC→TAA) ‡ | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,660,612 | T→A | 11.2% | Y307F (TAC→TTC) ‡ | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,660,613 | A→C | 12.7% | Y307D (TAC→GAC) ‡ | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,660,621 | C→G | 8.4% | S304T (AGC→ACC) | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,661,482 | G→C | 7.9% | P17R (CCG→CGG) | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,661,486 | C→G | 6.9% | D16H (GAC→CAC) | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,661,487 | C→G | 6.9% | V15V (GTG→GTC) | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,661,491 | G→C | 7.9% | P14R (CCG→CGG) | iscS ← | cysteine desulfurase (tRNA sulfurtransferase), PLP‑dependent |
| RA | 2,679,430 | Δ1 bp | 8.6% | intergenic (‑63/+34) | yphF ← / ← yphG | putative sugar ABC transporter periplasmic binding protein/DUF4380 domain‑containing TPR repeat protein |
| RA | 2,679,434:1 | +C | 8.8% | intergenic (‑67/+30) | yphF ← / ← yphG | putative sugar ABC transporter periplasmic binding protein/DUF4380 domain‑containing TPR repeat protein |
| RA | 2,681,967 | T→C | 6.8% | Y260C (TAC→TGC) | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| RA | 2,681,969 | C→G | 6.9% | Q259H (CAG→CAC) ‡ | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| RA | 2,681,971 | G→A | 6.9% | Q259* (CAG→TAG) ‡ | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| RA | 2,687,045 | A→T | 5.4% | intergenic (+20/+25) | hmp → / ← glnB | fused nitric oxide dioxygenase/dihydropteridine reductase 2/regulatory protein P‑II for glutamine synthetase |
| RA | 2,691,169 | A→T | 10.0% | noncoding (172/184 nt) | glmY ← | sRNA activator of glmS mRNA, glmZ processing antagonist |
| RA | 2,691,171 | T→A | 9.7% | noncoding (170/184 nt) | glmY ← | sRNA activator of glmS mRNA, glmZ processing antagonist |
| RA | 2,691,173 | A→T | 9.5% | noncoding (168/184 nt) | glmY ← | sRNA activator of glmS mRNA, glmZ processing antagonist |
| RA | 2,698,507 | C→A | 7.1% | G15V (GGA→GTA) | pgpC ← | phosphatidylglycerophosphatase C, membrane bound |
| RA | 2,704,304 | A→G | 12.2% | intergenic (‑241/+31) | rnc ← / ← lepB | RNase III/leader peptidase (signal peptidase I) |
| RA | 2,704,306 | A→T | 13.0% | intergenic (‑243/+29) | rnc ← / ← lepB | RNase III/leader peptidase (signal peptidase I) |
| RA | 2,704,308 | C→T | 12.2% | intergenic (‑245/+27) | rnc ← / ← lepB | RNase III/leader peptidase (signal peptidase I) |
| RA | 2,707,320 | A→T | 5.0% | intergenic (‑196/+2) | lepA ← / ← rseC | back‑translocating elongation factor EF4, GTPase/SoxR iron‑sulfur cluster reduction factor component |
| RA | 2,707,321 | A→T | 5.0% | intergenic (‑197/+1) | lepA ← / ← rseC | back‑translocating elongation factor EF4, GTPase/SoxR iron‑sulfur cluster reduction factor component |
| RA | 2,712,128 | C→G | 8.1% | A213P (GCG→CCG) | trmN ← | tRNA1(Val) (adenine(37)‑N6)‑methyltransferase |
| RA | 2,712,130 | T→A | 8.7% | Q212L (CAG→CTG) | trmN ← | tRNA1(Val) (adenine(37)‑N6)‑methyltransferase |
| RA | 2,712,133 | G→C | 8.0% | P211R (CCG→CGG) | trmN ← | tRNA1(Val) (adenine(37)‑N6)‑methyltransferase |
| RA | 2,714,358 | A→G | 6.4% | intergenic (+128/+81) | srmB → / ← yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| RA | 2,714,359 | A→C | 6.5% | intergenic (+129/+80) | srmB → / ← yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| RA | 2,714,365 | T→G | 6.4% | intergenic (+135/+74) | srmB → / ← yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| RA | 2,714,366 | C→A | 7.0% | intergenic (+136/+73) | srmB → / ← yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| RA | 2,714,372 | G→T | 5.9% | intergenic (+142/+67) | srmB → / ← yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| RA | 2,714,373 | C→T | 5.8% | intergenic (+143/+66) | srmB → / ← yfiE | ATP‑dependent RNA helicase/putative DNA‑binding transcriptional regulator |
| RA | 2,716,030 | T→G | 5.6% | intergenic (+20/+36) | eamB → / ← grcA | cysteine and O‑acetylserine exporter/autonomous glycyl radical cofactor |
| RA | 2,724,095 | C→A | 13.1% | intergenic (+13/‑33) | pssA → / → yfiM | phosphatidylserine synthase; CDP‑diacylglycerol‑serine O‑phosphatidyltransferase/putative lipoprotein |
| RA | 2,724,097 | T→A | 12.4% | intergenic (+15/‑31) | pssA → / → yfiM | phosphatidylserine synthase; CDP‑diacylglycerol‑serine O‑phosphatidyltransferase/putative lipoprotein |
| RA | 2,724,099 | T→G | 11.1% | intergenic (+17/‑29) | pssA → / → yfiM | phosphatidylserine synthase; CDP‑diacylglycerol‑serine O‑phosphatidyltransferase/putative lipoprotein |
| RA | 2,731,580 | C→T | 8.9% | intergenic (‑423/+20) | rrsG ← / ← clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| RA | 2,731,581 | G→T | 9.0% | intergenic (‑424/+19) | rrsG ← / ← clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| RA | 2,731,582 | A→C | 8.5% | intergenic (‑425/+18) | rrsG ← / ← clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| RA | 2,731,583 | A→G | 8.5% | intergenic (‑426/+17) | rrsG ← / ← clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| RA | 2,736,911 | C→T | 6.7% | intergenic (+28/‑243) | bamD → / → raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| RA | 2,736,913 | T→A | 7.2% | intergenic (+30/‑241) | bamD → / → raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| RA | 2,736,914 | T→A | 7.6% | intergenic (+31/‑240) | bamD → / → raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| RA | 2,736,916 | A→G | 7.5% | intergenic (+33/‑238) | bamD → / → raiA | BamABCDE complex OM biogenesis lipoprotein/cold shock protein associated with 30S ribosomal subunit |
| RA | 2,750,073 | G→T | 7.2% | intergenic (+13/+42) | yfjD → / ← grpE | UPF0053 family inner membrane protein/heat shock protein |
| RA | 2,750,078 | T→G | 7.8% | intergenic (+18/+37) | yfjD → / ← grpE | UPF0053 family inner membrane protein/heat shock protein |
| RA | 2,750,081 | C→A | 8.3% | intergenic (+21/+34) | yfjD → / ← grpE | UPF0053 family inner membrane protein/heat shock protein |
| RA | 2,750,086 | A→C | 6.9% | intergenic (+26/+29) | yfjD → / ← grpE | UPF0053 family inner membrane protein/heat shock protein |
| RA | 2,753,986 | A→T | 10.6% | intergenic (+40/+22) | bamE → / ← ratB | lipoprotein component of BamABCDE OM biogenesis complex/UPF0125 family protein |
| RA | 2,754,944 | A→G | 5.5% | N17D (AAC→GAC) ‡ | smpB → | tmRNA‑binding trans‑translation protein |
| RA | 2,754,945 | A→T | 5.7% | N17I (AAC→ATC) ‡ | smpB → | tmRNA‑binding trans‑translation protein |
| RA | 2,754,946 | C→T | 5.3% | N17N (AAC→AAT) ‡ | smpB → | tmRNA‑binding trans‑translation protein |
| RA | 2,757,418 | C→A | 7.1% | intergenic (+18/+226) | intA → / ← yfjH | CP4‑57 prophage; integrase/CP4‑57 prophage; uncharacterized protein |
| RA | 2,757,419 | T→G | 7.9% | intergenic (+19/+225) | intA → / ← yfjH | CP4‑57 prophage; integrase/CP4‑57 prophage; uncharacterized protein |
| RA | 2,757,420 | C→A | 7.6% | intergenic (+20/+224) | intA → / ← yfjH | CP4‑57 prophage; integrase/CP4‑57 prophage; uncharacterized protein |
| RA | 2,757,421 | T→G | 6.5% | intergenic (+21/+223) | intA → / ← yfjH | CP4‑57 prophage; integrase/CP4‑57 prophage; uncharacterized protein |
| RA | 2,760,589 | C→A | 5.5% | R15R (CGG→AGG) | yfjJ → | CP4‑57 prophage; uncharacterized protein |
| RA | 2,761,620 | T→G | 7.8% | K641Q (AAG→CAG) | yfjK ← | radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage |
| RA | 2,761,623 | C→A | 7.9% | V640L (GTA→TTA) | yfjK ← | radiation resistance protein; DEAD/H helicase‑like protein; CP4‑57 putative defective prophage |
| RA | 2,777,571 | A→G | 8.4% | D40G (GAC→GGC) | ypjF → | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system |
| RA | 2,777,573 | A→G | 8.6% | T41A (ACG→GCG) ‡ | ypjF → | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system |
| RA | 2,777,574 | C→T | 8.2% | T41M (ACG→ATG) ‡ | ypjF → | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system |
| RA | 2,777,576 | C→T | 8.0% | P42S (CCG→TCG) | ypjF → | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system |
| RA | 2,779,755 | C→A | 5.5% | S991I (AGC→ATC) | ypjA ← | adhesin‑like autotransporter |
| RA | 2,788,671 | A→T | 5.9% | intergenic (+22/‑314) | ygaQ → / → csiD | uncharacterized protein; putative enzyme/carbon starvation protein |
| RA | 2,788,673 | A→T | 6.3% | intergenic (+24/‑312) | ygaQ → / → csiD | uncharacterized protein; putative enzyme/carbon starvation protein |
| RA | 2,788,674 | A→T | 6.3% | intergenic (+25/‑311) | ygaQ → / → csiD | uncharacterized protein; putative enzyme/carbon starvation protein |
| RA | 2,788,676 | A→T | 6.3% | intergenic (+27/‑309) | ygaQ → / → csiD | uncharacterized protein; putative enzyme/carbon starvation protein |
| RA | 2,796,375 | T→A | 6.8% | I138F (ATT→TTT) | ygaU ← | uncharacterized protein |
| RA | 2,799,389 | T→A | 5.1% | S76T (TCG→ACG) | alaE → | alanine exporter, alanine‑inducible, stress‑responsive |
| RA | 2,800,515 | C→A | 7.8% | intergenic (+40/‑208) | ygaM → / → nrdH | putative membrane‑anchored DUF883 family ribosome‑binding protein/hydrogen donor for NrdEF electron transport system; glutaredoxin‑like protein |
| RA | 2,800,517 | T→A | 7.6% | intergenic (+42/‑206) | ygaM → / → nrdH | putative membrane‑anchored DUF883 family ribosome‑binding protein/hydrogen donor for NrdEF electron transport system; glutaredoxin‑like protein |
| RA | 2,800,519 | T→G | 9.2% | intergenic (+44/‑204) | ygaM → / → nrdH | putative membrane‑anchored DUF883 family ribosome‑binding protein/hydrogen donor for NrdEF electron transport system; glutaredoxin‑like protein |
| RA | 2,801,056 | A→T | 5.3% | N31I (AAT→ATT) | nrdI → | NrdEF cluster assembly flavodoxin |
| RA | 2,802,399 | T→G | 5.1% | F351C (TTC→TGC) | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,802,411 | C→A | 5.6% | A355E (GCA→GAA) | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,802,651 | T→C | 8.2% | V435A (GTA→GCA) | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,802,654 | A→T | 6.5% | E436V (GAG→GTG) ‡ | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,802,655 | G→C | 6.5% | E436D (GAG→GAC) ‡ | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,802,656 | A→T | 6.5% | T437S (ACT→TCT) | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,802,659 | G→A | 6.2% | A438T (GCC→ACC) | nrdE → | ribonucleoside‑diphosphate reductase 2, alpha subunit |
| RA | 2,822,673 | C→T | 5.6% | intergenic (‑34/+35) | recX ← / ← recA | regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor |
| RA | 2,822,678 | G→T | 5.4% | intergenic (‑39/+30) | recX ← / ← recA | regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor |
| RA | 2,822,679 | A→C | 6.8% | intergenic (‑40/+29) | recX ← / ← recA | regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor |
| RA | 2,822,684 | A→G | 6.2% | intergenic (‑45/+24) | recX ← / ← recA | regulatory protein for RecA/DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor |
| RA | 2,823,838 | C→A | 6.6% | intergenic (‑69/+11) | recA ← / ← pncC | DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor/nicotinamide‑nucleotide amidohydrolase; NMN amidohydrolase |
| RA | 2,823,839 | T→G | 6.4% | intergenic (‑70/+10) | recA ← / ← pncC | DNA recombination and repair protein; ssDNA‑dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP‑dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor/nicotinamide‑nucleotide amidohydrolase; NMN amidohydrolase |
| RA | 2,827,198 | G→C | 5.4% | A269A (GCG→GCC) | srlE → | glucitol/sorbitol‑specific enzyme IIB component of PTS |
| RA | 2,835,127 | A→C | 8.2% | intergenic (+82/+46) | norW → / ← hypF | NADH:flavorubredoxin oxidoreductase/carbamoyl phosphate phosphatase and [NiFe] hydrogenase maturation protein |
| RA | 2,838,222 | A→T | 7.1% | intergenic (‑117/+32) | hydN ← / ← ascG | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit/asc operon transcriptional repressor; prpBC operon repressor |
| RA | 2,839,321 | C→G | 12.8% | intergenic (‑57/‑203) | ascG ← / → ascF | asc operon transcriptional repressor; prpBC operon repressor/cellobiose/arbutin/salicin‑specific PTS enzymes, IIB and IC components |
| RA | 2,839,323 | T→A | 12.0% | intergenic (‑59/‑201) | ascG ← / → ascF | asc operon transcriptional repressor; prpBC operon repressor/cellobiose/arbutin/salicin‑specific PTS enzymes, IIB and IC components |
| RA | 2,839,324 | T→A | 12.0% | intergenic (‑60/‑200) | ascG ← / → ascF | asc operon transcriptional repressor; prpBC operon repressor/cellobiose/arbutin/salicin‑specific PTS enzymes, IIB and IC components |
| RA | 2,839,326 | C→G | 11.8% | intergenic (‑62/‑198) | ascG ← / → ascF | asc operon transcriptional repressor; prpBC operon repressor/cellobiose/arbutin/salicin‑specific PTS enzymes, IIB and IC components |
| RA | 2,863,768 | A→G | 9.1% | Q59R (CAG→CGG) | ygbL → | putative class II aldolase |
| RA | 2,863,772 | G→A | 10.1% | R60R (CGG→CGA) | ygbL → | putative class II aldolase |
| RA | 2,863,777 | C→G | 10.7% | S62C (TCC→TGC) ‡ | ygbL → | putative class II aldolase |
| RA | 2,863,778 | C→G | 11.0% | S62S (TCC→TCG) ‡ | ygbL → | putative class II aldolase |
| RA | 2,863,783 | T→C | 12.0% | V64A (GTC→GCC) | ygbL → | putative class II aldolase |
| RA | 2,863,787 | C→T | 9.7% | A65A (GCC→GCT) | ygbL → | putative class II aldolase |
| RA | 2,866,487 | G→C | 6.1% | intergenic (+22/+72) | ygbN → / ← rpoS | putative transporter/RNA polymerase, sigma S (sigma 38) factor |
| RA | 2,866,488 | G→C | 5.3% | intergenic (+23/+71) | ygbN → / ← rpoS | putative transporter/RNA polymerase, sigma S (sigma 38) factor |
| RA | 2,877,557 | G→A | 6.5% | R326H (CGC→CAC) | iap → | aminopeptidase in alkaline phosphatase isozyme conversion |
| RA | 2,877,559 | T→G | 6.2% | C327G (TGC→GGC) | iap → | aminopeptidase in alkaline phosphatase isozyme conversion |
| RA | 2,877,562 | C→A | 6.4% | R328S (CGT→AGT) ‡ | iap → | aminopeptidase in alkaline phosphatase isozyme conversion |
| RA | 2,877,564 | T→C | 6.1% | R328R (CGT→CGC) ‡ | iap → | aminopeptidase in alkaline phosphatase isozyme conversion |
| RA | 2,897,910 | G→A | 6.9% | intergenic (‑40/+54) | ygcS ← / ← ygcU | putative MFS sugar transporter; membrane protein/putative FAD‑linked oxidoreductase |
| RA | 2,897,911 | C→G | 6.7% | intergenic (‑41/+53) | ygcS ← / ← ygcU | putative MFS sugar transporter; membrane protein/putative FAD‑linked oxidoreductase |
| RA | 2,897,912 | C→G | 7.1% | intergenic (‑42/+52) | ygcS ← / ← ygcU | putative MFS sugar transporter; membrane protein/putative FAD‑linked oxidoreductase |
| RA | 2,897,913 | T→C | 6.9% | intergenic (‑43/+51) | ygcS ← / ← ygcU | putative MFS sugar transporter; membrane protein/putative FAD‑linked oxidoreductase |
| RA | 2,900,322 | C→T | 7.1% | intergenic (‑49/‑270) | ygcW ← / → yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| RA | 2,900,324 | G→T | 7.6% | intergenic (‑51/‑268) | ygcW ← / → yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| RA | 2,900,327 | A→C | 7.3% | intergenic (‑54/‑265) | ygcW ← / → yqcE | putative SDR family oxidoreductase/putative MFS transporter, inner membrane protein |
| RA | 2,906,607 | C→T | 8.6% | intergenic (+24/+36) | ygcG → / ← eno | TPM domain protein, putative phosphatase/enolase |
| RA | 2,906,608 | G→C | 8.3% | intergenic (+25/+35) | ygcG → / ← eno | TPM domain protein, putative phosphatase/enolase |
| RA | 2,906,609 | G→C | 8.3% | intergenic (+26/+34) | ygcG → / ← eno | TPM domain protein, putative phosphatase/enolase |
| RA | 2,907,998 | A→T | 7.4% | intergenic (‑57/+31) | eno ← / ← pyrG | enolase/CTP synthetase |
| RA | 2,911,007 | G→A | 9.5% | R29C (CGT→TGT) | mazF ← | mRNA interferase toxin, antitoxin is MazE |
| RA | 2,911,008 | A→T | 9.6% | H28Q (CAT→CAA) ‡ | mazF ← | mRNA interferase toxin, antitoxin is MazE |
| RA | 2,911,009 | T→C | 9.7% | H28R (CAT→CGT) ‡ | mazF ← | mRNA interferase toxin, antitoxin is MazE |
| RA | 2,917,895 | G→A | 5.7% | intergenic (+82/+150) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,917,896 | C→A | 5.9% | intergenic (+83/+149) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,917,909 | T→G | 7.1% | intergenic (+96/+136) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,917,910 | T→C | 6.3% | intergenic (+97/+135) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,918,017 | C→T | 10.6% | intergenic (+204/+28) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,918,019 | G→T | 10.3% | intergenic (+206/+26) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,918,020 | A→C | 9.8% | intergenic (+207/+25) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,918,022 | A→G | 9.9% | intergenic (+209/+23) | barA → / ← gudD | hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/D‑glucarate dehydratase 1 |
| RA | 2,933,401 | A→C | 5.5% | V96V (GTT→GTG) | fucA ← | L‑fuculose‑1‑phosphate aldolase |
| RA | 2,937,435 | Δ1 bp | 7.2% | intergenic (+76/‑33) | fucI → / → fucK | L‑fucose isomerase/L‑fuculokinase |
| RA | 2,937,438 | A→T | 8.6% | intergenic (+79/‑30) | fucI → / → fucK | L‑fucose isomerase/L‑fuculokinase |
| RA | 2,937,440:1 | +C | 7.2% | intergenic (+81/‑28) | fucI → / → fucK | L‑fucose isomerase/L‑fuculokinase |
| RA | 2,939,331 | A→G | 11.6% | intergenic (+21/‑37) | fucU → / → fucR | L‑fucose mutarotase/l‑fucose operon activator |
| RA | 2,939,333 | G→C | 11.4% | intergenic (+23/‑35) | fucU → / → fucR | L‑fucose mutarotase/l‑fucose operon activator |
| RA | 2,939,335 | C→T | 12.1% | intergenic (+25/‑33) | fucU → / → fucR | L‑fucose mutarotase/l‑fucose operon activator |
| RA | 2,945,977 | T→G | 5.2% | intergenic (‑135/+104) | tcdA ← / ← mltA | tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA/membrane‑bound lytic murein transglycosylase A |
| RA | 2,945,978 | C→A | 5.1% | intergenic (‑136/+103) | tcdA ← / ← mltA | tRNA threonylcarbamoyladenosine dehydratase; sulfur acceptor for CsdA/membrane‑bound lytic murein transglycosylase A |
| RA | 2,960,926 | G→C | 7.1% | G501G (GGC→GGG) ‡ | recC ← | exonuclease V (RecBCD complex), gamma chain |
| RA | 2,960,928 | C→G | 7.2% | G501R (GGC→CGC) ‡ | recC ← | exonuclease V (RecBCD complex), gamma chain |
| RA | 2,960,930 | G→C | 7.2% | S500C (TCC→TGC) | recC ← | exonuclease V (RecBCD complex), gamma chain |
| RA | 2,962,561 | G→A | 8.2% | N68N (AAC→AAT) ‡ | ppdC ← | putative prepilin peptidase‑dependent protein |
| RA | 2,962,562 | T→C | 8.2% | N68S (AAC→AGC) ‡ | ppdC ← | putative prepilin peptidase‑dependent protein |
| RA | 2,971,146 | T→C | 7.6% | intergenic (+13/‑125) | ygdQ → / → ygdR | UPF0053 family inner membrane protein/DUF903 family verified lipoprotein |
| RA | 2,971,151 | T→C | 8.1% | intergenic (+18/‑120) | ygdQ → / → ygdR | UPF0053 family inner membrane protein/DUF903 family verified lipoprotein |
| RA | 2,971,154 | G→A | 8.1% | intergenic (+21/‑117) | ygdQ → / → ygdR | UPF0053 family inner membrane protein/DUF903 family verified lipoprotein |
| RA | 2,971,159 | G→A | 8.1% | intergenic (+26/‑112) | ygdQ → / → ygdR | UPF0053 family inner membrane protein/DUF903 family verified lipoprotein |
| RA | 2,974,265 | C→T | 8.7% | V584I (GTT→ATT) | aas ← | fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase |
| RA | 2,974,266 | A→G | 8.9% | N583N (AAT→AAC) | aas ← | fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase |
| RA | 2,976,320 | T→G | 6.0% | noncoding (66/82 nt) | omrB ← | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| RA | 2,976,321 | C→A | 7.6% | noncoding (65/82 nt) | omrB ← | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| RA | 2,980,742 | A→G | 9.0% | intergenic (‑107/+22) | ygeA ← / ← araE | Asp/Glu_racemase family protein/arabinose transporter |
| RA | 2,980,744 | A→T | 9.3% | intergenic (‑109/+20) | ygeA ← / ← araE | Asp/Glu_racemase family protein/arabinose transporter |
| RA | 2,980,746 | C→T | 8.6% | intergenic (‑111/+18) | ygeA ← / ← araE | Asp/Glu_racemase family protein/arabinose transporter |
| RA | 2,987,103 | C→T | 7.6% | intergenic (+27/‑433) | yqeG → / → yqeH | putative transporter/putative LuxR family transcriptional regulator |
| RA | 2,987,104 | T→A | 8.0% | intergenic (+28/‑432) | yqeG → / → yqeH | putative transporter/putative LuxR family transcriptional regulator |
| RA | 2,987,105 | A→G | 7.5% | intergenic (+29/‑431) | yqeG → / → yqeH | putative transporter/putative LuxR family transcriptional regulator |
| RA | 2,987,231 | G→T | 6.2% | intergenic (+155/‑305) | yqeG → / → yqeH | putative transporter/putative LuxR family transcriptional regulator |
| RA | 2,988,208 | G→A | 5.1% | intergenic (+40/‑294) | yqeH → / → yqeI | putative LuxR family transcriptional regulator/putative transcriptional regulator |
| RA | 2,993,896 | T→A | 5.2% | intergenic (+40/‑43) | ygeI → / → pbl | uncharacterized protein/pseudogene, peptidoglycan‑binding enzyme family |
| RA | 3,008,626 | G→A | 5.1% | V373I (GTT→ATT) | ygeX → | 2,3‑diaminopropionate ammonia lyase, PLP‑dependent |
| RA | 3,020,510 | G→T | 6.0% | intergenic (+21/‑30) | ssnA → / → ygfM | putative chlorohydrolase/aminohydrolase/putative oxidoreductase |
| RA | 3,020,511 | C→G | 5.5% | intergenic (+22/‑29) | ssnA → / → ygfM | putative chlorohydrolase/aminohydrolase/putative oxidoreductase |
| RA | 3,020,512 | A→C | 5.8% | intergenic (+23/‑28) | ssnA → / → ygfM | putative chlorohydrolase/aminohydrolase/putative oxidoreductase |
| RA | 3,032,403 | T→C | 5.2% | M346T (ATG→ACG) ‡ | uacT → | uric acid permease |
| RA | 3,032,404 | G→C | 5.2% | M346I (ATG→ATC) ‡ | uacT → | uric acid permease |
| RA | 3,032,405 | G→A | 5.1% | V347M (GTG→ATG) | uacT → | uric acid permease |
| RA | 3,033,624 | A→G | 5.9% | intergenic (+11/+33) | idi → / ← lysS | isopentenyl diphosphate isomerase/lysine tRNA synthetase, constitutive |
| RA | 3,033,627 | T→A | 5.4% | intergenic (+14/+30) | idi → / ← lysS | isopentenyl diphosphate isomerase/lysine tRNA synthetase, constitutive |
| RA | 3,033,628 | T→A | 5.4% | intergenic (+15/+29) | idi → / ← lysS | isopentenyl diphosphate isomerase/lysine tRNA synthetase, constitutive |
| RA | 3,033,631 | C→T | 5.5% | intergenic (+18/+26) | idi → / ← lysS | isopentenyl diphosphate isomerase/lysine tRNA synthetase, constitutive |
| RA | 3,038,277 | A→C | 5.7% | S182R (AGT→AGG) ‡ | dsbC ← | protein disulfide isomerase II |
| RA | 3,038,279 | T→A | 5.8% | S182C (AGT→TGT) ‡ | dsbC ← | protein disulfide isomerase II |
| RA | 3,038,281 | G→C | 5.8% | A181G (GCC→GGC) | dsbC ← | protein disulfide isomerase II |
| RA | 3,038,283 | T→A | 5.8% | P180P (CCA→CCT) ‡ | dsbC ← | protein disulfide isomerase II |
| RA | 3,038,285 | G→T | 5.8% | P180T (CCA→ACA) ‡ | dsbC ← | protein disulfide isomerase II |
| RA | 3,045,127 | T→G | 5.1% | intergenic (+26/+31) | bglA → / ← ygfF | 6‑phospho‑beta‑glucosidase A/putative NAD(P)‑dependent oxidoreductase |
| RA | 3,052,886 | C→G | 6.5% | A211A (GCG→GCC) | ubiH ← | 2‑octaprenyl‑6‑methoxyphenol hydroxylase, FAD/NAD(P)‑binding |
| RA | 3,052,890 | A→C | 8.4% | L210R (CTG→CGG) | ubiH ← | 2‑octaprenyl‑6‑methoxyphenol hydroxylase, FAD/NAD(P)‑binding |
| RA | 3,052,893 | G→T | 6.5% | P209Q (CCG→CAG) | ubiH ← | 2‑octaprenyl‑6‑methoxyphenol hydroxylase, FAD/NAD(P)‑binding |
| RA | 3,052,897 | C→G | 6.9% | G208R (GGC→CGC) | ubiH ← | 2‑octaprenyl‑6‑methoxyphenol hydroxylase, FAD/NAD(P)‑binding |
| RA | 3,053,907 | G→T | 6.3% | L312M (CTG→ATG) | pepP ← | proline aminopeptidase P II |
| RA | 3,053,908 | A→T | 6.3% | I311I (ATT→ATA) ‡ | pepP ← | proline aminopeptidase P II |
| RA | 3,053,909 | A→C | 8.1% | I311S (ATT→AGT) ‡ | pepP ← | proline aminopeptidase P II |
| RA | 3,061,817 | G→C | 8.2% | W323S (TGG→TCG) ‡ | scpA → | methylmalonyl‑CoA mutase |
| RA | 3,061,818 | G→C | 8.3% | W323C (TGG→TGC) ‡ | scpA → | methylmalonyl‑CoA mutase |
| RA | 3,066,308 | A→T | 8.1% | I289N (ATT→AAT) ‡ | ygfI ← | putative DNA‑binding transcriptional regulator |
| RA | 3,066,309 | T→A | 9.5% | I289F (ATT→TTT) ‡ | ygfI ← | putative DNA‑binding transcriptional regulator |
| RA | 3,066,310 | A→T | 7.6% | H288Q (CAT→CAA) | ygfI ← | putative DNA‑binding transcriptional regulator |
| RA | 3,066,319 | Δ1 bp | 5.3% | coding (855/897 nt) | ygfI ← | putative DNA‑binding transcriptional regulator |
| RA | 3,068,922 | G→T | 5.6% | intergenic (‑114/+25) | argO ← / ← mscS | arginine transporter/mechanosensitive channel protein, small conductance |
| RA | 3,073,001 | C→T | 5.9% | E231K (GAA→AAA) | epd ← | D‑erythrose 4‑phosphate dehydrogenase |
| RA | 3,073,002 | A→G | 5.9% | F230F (TTT→TTC) | epd ← | D‑erythrose 4‑phosphate dehydrogenase |
| RA | 3,079,616 | G→T | 5.2% | intergenic (‑286/+28) | cmtB ← / ← tktA | putative mannitol‑specific enzyme IIA component of PTS/transketolase 1, thiamine triphosphate‑binding |
| RA | 3,082,701 | A→G | 5.1% | intergenic (+30/+176) | loiP → / ← speB | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein/agmatinase |
| RA | 3,082,702 | A→C | 5.1% | intergenic (+31/+175) | loiP → / ← speB | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein/agmatinase |
| RA | 3,082,708 | T→G | 5.1% | intergenic (+37/+169) | loiP → / ← speB | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein/agmatinase |
| RA | 3,082,709 | C→A | 5.1% | intergenic (+38/+168) | loiP → / ← speB | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein/agmatinase |
| RA | 3,082,715 | G→T | 5.3% | intergenic (+44/+162) | loiP → / ← speB | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein/agmatinase |
| RA | 3,082,716 | C→T | 5.2% | intergenic (+45/+161) | loiP → / ← speB | Phe‑Phe periplasmic metalloprotease, OM lipoprotein; low salt‑inducible; Era‑binding heat shock protein/agmatinase |
| RA | 3,092,774:1 | +A | 7.8% | coding (897/951 nt) | gshB → | glutathione synthetase |
| RA | 3,092,779 | Δ1 bp | 8.3% | coding (902/951 nt) | gshB → | glutathione synthetase |
| RA | 3,101,541 | G→C | 5.5% | P28R (CCG→CGG) | yggN ← | DUF2884 family putative periplasmic protein |
| RA | 3,101,655 | T→A | 9.2% | intergenic (‑32/+152) | yggN ← / ← yggL | DUF2884 family putative periplasmic protein/DUF469 family protein |
| RA | 3,101,656 | T→A | 9.4% | intergenic (‑33/+151) | yggN ← / ← yggL | DUF2884 family putative periplasmic protein/DUF469 family protein |
| RA | 3,107,875 | A→G | 6.5% | I427I (ATT→ATC) ‡ | speC ← | ornithine decarboxylase, constitutive |
| RA | 3,107,876 | A→C | 5.7% | I427S (ATT→AGT) ‡ | speC ← | ornithine decarboxylase, constitutive |
| RA | 3,107,879 | G→T | 6.7% | A426D (GCT→GAT) ‡ | speC ← | ornithine decarboxylase, constitutive |
| RA | 3,107,880 | C→T | 6.9% | A426T (GCT→ACT) ‡ | speC ← | ornithine decarboxylase, constitutive |
| RA | 3,124,309 | T→C | 6.0% | H384R (CAT→CGT) | glcF ← | glycolate oxidase 4Fe‑4S iron‑sulfur cluster subunit |
| RA | 3,124,312 | G→A | 5.8% | T383M (ACG→ATG) | glcF ← | glycolate oxidase 4Fe‑4S iron‑sulfur cluster subunit |
| RA | 3,135,356 | T→C | 6.2% | Q339R (CAG→CGG) ‡ | pitB ← | phosphate transporter |
| RA | 3,135,357 | G→A | 6.3% | Q339* (CAG→TAG) ‡ | pitB ← | phosphate transporter |
| RA | 3,136,628 | T→G | 6.3% | intergenic (‑257/+35) | pitB ← / ← gss | phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase |
| RA | 3,136,629 | C→A | 6.0% | intergenic (‑258/+34) | pitB ← / ← gss | phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase |
| RA | 3,136,630 | T→A | 5.7% | intergenic (‑259/+33) | pitB ← / ← gss | phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase |
| RA | 3,136,631 | T→G | 5.7% | intergenic (‑260/+32) | pitB ← / ← gss | phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase |
| RA | 3,136,632 | C→A | 6.3% | intergenic (‑261/+31) | pitB ← / ← gss | phosphate transporter/glutathionylspermidine amidase and glutathionylspermidine synthetase |
| RA | 3,140,351 | C→T | 6.3% | R150H (CGC→CAC) ‡ | hybE ← | hydrogenase 2‑specific chaperone |
| RA | 3,140,352 | G→C | 6.3% | R150G (CGC→GGC) ‡ | hybE ← | hydrogenase 2‑specific chaperone |
| RA | 3,140,353 | A→G | 6.2% | R149R (CGT→CGC) | hybE ← | hydrogenase 2‑specific chaperone |
| RA | 3,140,859 | T→G | 5.8% | E143A (GAG→GCG) | hybD ← | maturation protease for hydrogenase 2 |
| RA | 3,140,862 | A→T | 6.6% | L142H (CTT→CAT) | hybD ← | maturation protease for hydrogenase 2 |
| RA | 3,140,864 | C→A | 5.4% | A141A (GCG→GCT) | hybD ← | maturation protease for hydrogenase 2 |
| RA | 3,146,761 | T→G | 7.6% | intergenic (‑24/+95) | yghW ← / ← yghX | DUF2623 family protein/pseudogene, dienlactone hydrolase family |
| RA | 3,146,762 | G→A | 7.6% | intergenic (‑25/+94) | yghW ← / ← yghX | DUF2623 family protein/pseudogene, dienlactone hydrolase family |
| RA | 3,146,763 | T→C | 7.9% | intergenic (‑26/+93) | yghW ← / ← yghX | DUF2623 family protein/pseudogene, dienlactone hydrolase family |
| RA | 3,146,764 | C→A | 8.5% | intergenic (‑27/+92) | yghW ← / ← yghX | DUF2623 family protein/pseudogene, dienlactone hydrolase family |
| RA | 3,155,227 | C→A | 8.5% | intergenic (‑9/‑128) | yqhC ← / → yqhD | transcriptional activator of yqhD/aldehyde reductase, NADPH‑dependent |
| RA | 3,155,228 | A→G | 8.2% | intergenic (‑10/‑127) | yqhC ← / → yqhD | transcriptional activator of yqhD/aldehyde reductase, NADPH‑dependent |
| RA | 3,155,229 | C→T | 8.4% | intergenic (‑11/‑126) | yqhC ← / → yqhD | transcriptional activator of yqhD/aldehyde reductase, NADPH‑dependent |
| RA | 3,155,230 | T→G | 8.5% | intergenic (‑12/‑125) | yqhC ← / → yqhD | transcriptional activator of yqhD/aldehyde reductase, NADPH‑dependent |
| RA | 3,165,154 | T→A | 6.2% | M274L (ATG→TTG) | parC ← | DNA topoisomerase IV, subunit A |
| RA | 3,165,155 | T→A | 6.7% | Q273H (CAA→CAT) | parC ← | DNA topoisomerase IV, subunit A |
| RA | 3,166,154 | T→C | 5.0% | Q522R (CAG→CGG) ‡ | ygiS ← | putative ABC transporter permease |
| RA | 3,166,155 | G→C | 5.1% | Q522E (CAG→GAG) ‡ | ygiS ← | putative ABC transporter permease |
| RA | 3,166,156 | G→A | 5.3% | P521P (CCC→CCT) | ygiS ← | putative ABC transporter permease |
| RA | 3,169,260 | Δ1 bp | 6.2% | intergenic (‑29/+24) | ygiV ← / ← ygiW | transcriptional repressor for mcbR biofilm gene/hydrogen peroxide and cadmium resistance periplasmic protein; stress‑induced OB‑fold protein |
| RA | 3,169,265:1 | +T | 5.4% | intergenic (‑34/+19) | ygiV ← / ← ygiW | transcriptional repressor for mcbR biofilm gene/hydrogen peroxide and cadmium resistance periplasmic protein; stress‑induced OB‑fold protein |
| RA | 3,171,852 | C→T | 6.8% | intergenic (+19/+27) | qseC → / ← ygiZ | quorum sensing sensory histidine kinase in two‑component regulatory system with QseB/inner membrane protein |
| RA | 3,171,857 | A→T | 6.8% | intergenic (+24/+22) | qseC → / ← ygiZ | quorum sensing sensory histidine kinase in two‑component regulatory system with QseB/inner membrane protein |
| RA | 3,171,858 | A→T | 7.2% | intergenic (+25/+21) | qseC → / ← ygiZ | quorum sensing sensory histidine kinase in two‑component regulatory system with QseB/inner membrane protein |
| RA | 3,171,863 | A→G | 7.6% | intergenic (+30/+16) | qseC → / ← ygiZ | quorum sensing sensory histidine kinase in two‑component regulatory system with QseB/inner membrane protein |
| RA | 3,173,476 | C→T | 5.9% | intergenic (+20/+28) | ygiN → / ← parE | quinol monooxygenase/DNA topoisomerase IV, subunit B |
| RA | 3,173,479 | T→G | 5.7% | intergenic (+23/+25) | ygiN → / ← parE | quinol monooxygenase/DNA topoisomerase IV, subunit B |
| RA | 3,173,480 | C→G | 6.0% | intergenic (+24/+24) | ygiN → / ← parE | quinol monooxygenase/DNA topoisomerase IV, subunit B |
| RA | 3,173,481 | C→A | 6.4% | intergenic (+25/+23) | ygiN → / ← parE | quinol monooxygenase/DNA topoisomerase IV, subunit B |
| RA | 3,173,484 | A→G | 6.1% | intergenic (+28/+20) | ygiN → / ← parE | quinol monooxygenase/DNA topoisomerase IV, subunit B |
| RA | 3,180,690 | G→A | 5.7% | W90* (TGG→TGA) | ygiC → | ATP‑Grasp family ATPase |
| RA | 3,180,694 | A→G | 9.5% | T92A (ACG→GCG) | ygiC → | ATP‑Grasp family ATPase |
| RA | 3,180,698 | A→G | 5.1% | H93R (CAC→CGC) ‡ | ygiC → | ATP‑Grasp family ATPase |
| RA | 3,180,699 | C→T | 5.1% | H93H (CAC→CAT) ‡ | ygiC → | ATP‑Grasp family ATPase |
| RA | 3,181,600 | A→G | 7.3% | intergenic (+19/+19) | ygiC → / ← ygiD | ATP‑Grasp family ATPase/4,5‑ DOPA‑extradiol‑dioxygenase |
| RA | 3,181,601 | C→A | 7.3% | intergenic (+20/+18) | ygiC → / ← ygiD | ATP‑Grasp family ATPase/4,5‑ DOPA‑extradiol‑dioxygenase |
| RA | 3,181,602 | T→G | 7.4% | intergenic (+21/+17) | ygiC → / ← ygiD | ATP‑Grasp family ATPase/4,5‑ DOPA‑extradiol‑dioxygenase |
| RA | 3,181,603 | C→T | 7.4% | intergenic (+22/+16) | ygiC → / ← ygiD | ATP‑Grasp family ATPase/4,5‑ DOPA‑extradiol‑dioxygenase |
| RA | 3,183,345:1 | +T | 8.8% | intergenic (+22/+468) | zupT → / ← ribB | zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| RA | 3,183,350 | Δ1 bp | 8.5% | intergenic (+27/+463) | zupT → / ← ribB | zinc transporter/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
| RA | 3,196,103 | C→T | 8.1% | M217I (ATG→ATA) | hldE ← | heptose 7‑phosphate kinase and heptose 1‑phosphate adenyltransferase |
| RA | 3,202,693 | C→G | 6.3% | P268R (CCG→CGG) | cca → | fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase |
| RA | 3,206,671 | C→A | 6.3% | A70D (GCC→GAC) | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,673 | T→A | 5.9% | C71S (TGT→AGT) ‡ | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,206,675 | T→G | 6.1% | C71W (TGT→TGG) ‡ | ttdA → | L‑tartrate dehydratase, alpha subunit |
| RA | 3,208,201 | G→A | 6.1% | V60M (GTG→ATG) | ttdT → | L‑tartrate/succinate antiporte |
| RA | 3,208,205 | G→A | 6.2% | G61D (GGT→GAT) | ttdT → | L‑tartrate/succinate antiporte |
| RA | 3,215,694 | G→T | 5.5% | intergenic (+21/+33) | ileX → / ← yqjH | tRNA‑Ile/putative siderophore interacting protein |
| RA | 3,215,695 | A→T | 5.3% | intergenic (+22/+32) | ileX → / ← yqjH | tRNA‑Ile/putative siderophore interacting protein |
| RA | 3,215,696 | A→T | 5.1% | intergenic (+23/+31) | ileX → / ← yqjH | tRNA‑Ile/putative siderophore interacting protein |
| RA | 3,215,697 | A→C | 5.3% | intergenic (+24/+30) | ileX → / ← yqjH | tRNA‑Ile/putative siderophore interacting protein |
| RA | 3,215,993 | T→A | 6.8% | K167* (AAA→TAA) | yqjH ← | putative siderophore interacting protein |
| RA | 3,216,652 | G→A | 5.9% | intergenic (‑161/‑127) | yqjH ← / → yqjI | putative siderophore interacting protein/PadR family putative transcriptional regulator |
| RA | 3,216,653 | C→A | 5.8% | intergenic (‑162/‑126) | yqjH ← / → yqjI | putative siderophore interacting protein/PadR family putative transcriptional regulator |
| RA | 3,216,659 | G→T | 5.9% | intergenic (‑168/‑120) | yqjH ← / → yqjI | putative siderophore interacting protein/PadR family putative transcriptional regulator |
| RA | 3,216,660 | A→C | 5.9% | intergenic (‑169/‑119) | yqjH ← / → yqjI | putative siderophore interacting protein/PadR family putative transcriptional regulator |
| RA | 3,216,666 | T→G | 6.0% | intergenic (‑175/‑113) | yqjH ← / → yqjI | putative siderophore interacting protein/PadR family putative transcriptional regulator |
| RA | 3,216,667 | T→C | 5.9% | intergenic (‑176/‑112) | yqjH ← / → yqjI | putative siderophore interacting protein/PadR family putative transcriptional regulator |
| RA | 3,234,506 | G→A | 5.6% | intergenic (‑51/+233) | higB ← / ← rlmG | mRNA interferase toxin of the HigB‑HigA toxin‑antitoxin system/23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| RA | 3,234,507 | A→T | 5.8% | intergenic (‑52/+232) | higB ← / ← rlmG | mRNA interferase toxin of the HigB‑HigA toxin‑antitoxin system/23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| RA | 3,234,508 | T→C | 5.7% | intergenic (‑53/+231) | higB ← / ← rlmG | mRNA interferase toxin of the HigB‑HigA toxin‑antitoxin system/23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| RA | 3,234,702 | A→C | 5.0% | intergenic (‑247/+37) | higB ← / ← rlmG | mRNA interferase toxin of the HigB‑HigA toxin‑antitoxin system/23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| RA | 3,238,463 | C→T | 5.9% | intergenic (+166/‑117) | ygjR → / → alx | putative NAD(P)‑dependent dehydrogenase/putative membrane‑bound redox modulator |
| RA | 3,238,464 | A→C | 6.0% | intergenic (+167/‑116) | ygjR → / → alx | putative NAD(P)‑dependent dehydrogenase/putative membrane‑bound redox modulator |
| RA | 3,238,465 | G→T | 6.1% | intergenic (+168/‑115) | ygjR → / → alx | putative NAD(P)‑dependent dehydrogenase/putative membrane‑bound redox modulator |
| RA | 3,238,466 | A→G | 6.8% | intergenic (+169/‑114) | ygjR → / → alx | putative NAD(P)‑dependent dehydrogenase/putative membrane‑bound redox modulator |
| RA | 3,241,781 | C→T | 6.0% | intergenic (‑37/+46) | ygjV ← / ← uxaA | Imp‑YgjV family inner membrane protein/altronate hydrolase |
| RA | 3,241,786 | C→T | 6.2% | intergenic (‑42/+41) | ygjV ← / ← uxaA | Imp‑YgjV family inner membrane protein/altronate hydrolase |
| RA | 3,241,788 | T→A | 5.7% | intergenic (‑44/+39) | ygjV ← / ← uxaA | Imp‑YgjV family inner membrane protein/altronate hydrolase |
| RA | 3,241,790 | A→G | 6.0% | intergenic (‑46/+37) | ygjV ← / ← uxaA | Imp‑YgjV family inner membrane protein/altronate hydrolase |
| RA | 3,241,795 | A→G | 5.2% | intergenic (‑51/+32) | ygjV ← / ← uxaA | Imp‑YgjV family inner membrane protein/altronate hydrolase |
| RA | 3,250,989 | G→C | 5.3% | intergenic (+35/‑35) | yqjF → / → yqjG | putative quinol oxidase subunit/putative S‑transferase |
| RA | 3,250,990 | A→T | 5.1% | intergenic (+36/‑34) | yqjF → / → yqjG | putative quinol oxidase subunit/putative S‑transferase |
| RA | 3,250,991 | A→T | 5.5% | intergenic (+37/‑33) | yqjF → / → yqjG | putative quinol oxidase subunit/putative S‑transferase |
| RA | 3,250,992 | G→C | 5.4% | intergenic (+38/‑32) | yqjF → / → yqjG | putative quinol oxidase subunit/putative S‑transferase |
| RA | 3,259,122 | T→G | 5.2% | E176D (GAA→GAC) | tdcG ← | L‑serine dehydratase 3, anaerobic |
| RA | 3,259,126 | C→A | 5.3% | G175V (GGT→GTT) | tdcG ← | L‑serine dehydratase 3, anaerobic |
| RA | 3,263,501 | G→C | 6.7% | P54A (CCG→GCG) | tdcD ← | propionate kinase/acetate kinase C, anaerobic |
| RA | 3,269,956 | T→A | 13.5% | intergenic (+354/+260) | yhaC → / ← rnpB | pentapetide repeats‑related protein/RNase P, M1 RNA component |
| RA | 3,288,032 | C→A | 9.3% | intergenic (+22/‑58) | yraH → / → yraI | putative fimbrial‑like adhesin protein/putative periplasmic pilin chaperone |
| RA | 3,288,033 | T→G | 9.5% | intergenic (+23/‑57) | yraH → / → yraI | putative fimbrial‑like adhesin protein/putative periplasmic pilin chaperone |
| RA | 3,291,109 | A→T | 7.5% | K766* (AAA→TAA) ‡ | yraJ → | putative outer membrane protein |
| RA | 3,291,110 | A→T | 7.6% | K766I (AAA→ATA) ‡ | yraJ → | putative outer membrane protein |
| RA | 3,303,611 | T→A | 5.7% | I55N (ATT→AAT) | yhbW → | putative luciferase‑like monooxygenase |
| RA | 3,305,913 | G→T | 6.5% | intergenic (‑96/+58) | mtr ← / ← deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| RA | 3,305,914 | G→T | 6.5% | intergenic (‑97/+57) | mtr ← / ← deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| RA | 3,305,916 | A→T | 6.6% | intergenic (‑99/+55) | mtr ← / ← deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| RA | 3,305,918 | A→C | 5.8% | intergenic (‑101/+53) | mtr ← / ← deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| RA | 3,305,919 | A→C | 5.8% | intergenic (‑102/+52) | mtr ← / ← deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| RA | 3,313,208 | T→A | 5.5% | intergenic (‑30/+134) | rbfA ← / ← infB | 30s ribosome binding factor/translation initiation factor IF‑2 |
| RA | 3,318,079 | A→T | 5.4% | intergenic (‑73/+134) | rimP ← / ← metY | ribosome maturation factor for 30S subunits/tRNA‑Met |
| RA | 3,318,080 | A→T | 5.3% | intergenic (‑74/+133) | rimP ← / ← metY | ribosome maturation factor for 30S subunits/tRNA‑Met |
| RA | 3,322,040 | A→G | 7.3% | intergenic (‑427/+32) | yhbX ← / ← leuU | putative EptAB family phosphoethanolamine transferase, inner membrane protein/tRNA‑Leu |
| RA | 3,322,048 | T→G | 7.7% | intergenic (‑435/+24) | yhbX ← / ← leuU | putative EptAB family phosphoethanolamine transferase, inner membrane protein/tRNA‑Leu |
| RA | 3,322,049 | T→A | 7.5% | intergenic (‑436/+23) | yhbX ← / ← leuU | putative EptAB family phosphoethanolamine transferase, inner membrane protein/tRNA‑Leu |
| RA | 3,322,050 | T→A | 8.1% | intergenic (‑437/+22) | yhbX ← / ← leuU | putative EptAB family phosphoethanolamine transferase, inner membrane protein/tRNA‑Leu |
| RA | 3,322,051 | C→A | 7.1% | intergenic (‑438/+21) | yhbX ← / ← leuU | putative EptAB family phosphoethanolamine transferase, inner membrane protein/tRNA‑Leu |
| RA | 3,324,952 | A→G | 8.1% | intergenic (‑41/+49) | folP ← / ← ftsH | 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo |
| RA | 3,324,955 | A→G | 8.4% | intergenic (‑44/+46) | folP ← / ← ftsH | 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo |
| RA | 3,324,956 | C→T | 8.3% | intergenic (‑45/+45) | folP ← / ← ftsH | 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo |
| RA | 3,324,959 | C→T | 8.4% | intergenic (‑48/+42) | folP ← / ← ftsH | 7,8‑dihydropteroate synthase/protease, ATP‑dependent zinc‑metallo |
| RA | 3,330,415 | Δ1 bp | 5.6% | intergenic (+19/+167) | dacB → / ← obgE | D‑alanyl‑D‑alanine carboxypeptidase/GTPase involved in cell partioning and DNA repair |
| RA | 3,330,419:1 | +T | 5.5% | intergenic (+23/+163) | dacB → / ← obgE | D‑alanyl‑D‑alanine carboxypeptidase/GTPase involved in cell partioning and DNA repair |
| RA | 3,331,979 | T→C | 8.3% | T253A (ACG→GCG) | yhbE ← | EamA family inner membrane putative transporter |
| RA | 3,331,983 | G→C | 6.5% | I251M (ATC→ATG) | yhbE ← | EamA family inner membrane putative transporter |
| RA | 3,331,987 | G→A | 6.8% | A250V (GCG→GTG) | yhbE ← | EamA family inner membrane putative transporter |
| RA | 3,334,704 | G→C | 9.2% | intergenic (+23/‑205) | ispB → / → sfsB | octaprenyl diphosphate synthase/malPQ operon transcriptional activator |
| RA | 3,334,705 | C→T | 8.0% | intergenic (+24/‑204) | ispB → / → sfsB | octaprenyl diphosphate synthase/malPQ operon transcriptional activator |
| RA | 3,354,537 | C→G | 8.1% | intergenic (‑487/‑188) | yhcC ← / → gltB | putative Fe‑S oxidoreductase, Radical SAM superfamily protein/glutamate synthase, large subunit |
| RA | 3,368,142 | A→T | 7.9% | M106L (ATG→TTG) | yhcG → | DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily |
| RA | 3,368,150 | C→T | 5.6% | G108G (GGC→GGT) | yhcG → | DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily |
| RA | 3,381,848 | A→G | 5.5% | E369G (GAA→GGA) ‡ | degQ → | serine endoprotease, periplasmic |
| RA | 3,381,849 | A→C | 5.5% | E369D (GAA→GAC) ‡ | degQ → | serine endoprotease, periplasmic |
| RA | 3,381,850 | A→G | 5.5% | M370V (ATG→GTG) | degQ → | serine endoprotease, periplasmic |
| RA | 3,381,857 | C→T | 5.3% | T372M (ACG→ATG) ‡ | degQ → | serine endoprotease, periplasmic |
| RA | 3,381,858 | G→T | 5.4% | T372T (ACG→ACT) ‡ | degQ → | serine endoprotease, periplasmic |
| RA | 3,381,859 | C→T | 5.5% | P373S (CCA→TCA) | degQ → | serine endoprotease, periplasmic |
| RA | 3,385,836 | G→A | 5.7% | intergenic (+35/+21) | yhcN → / ← yhcO | cadmium and peroxide resistance protein, stress‑induced/putative barnase inhibitor |
| RA | 3,385,837 | T→A | 5.5% | intergenic (+36/+20) | yhcN → / ← yhcO | cadmium and peroxide resistance protein, stress‑induced/putative barnase inhibitor |
| RA | 3,385,838 | T→C | 5.7% | intergenic (+37/+19) | yhcN → / ← yhcO | cadmium and peroxide resistance protein, stress‑induced/putative barnase inhibitor |
| RA | 3,397,961 | T→G | 5.7% | S140R (AGC→CGC) | yhdE ← | dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo‑UTP pyrophosphatase |
| RA | 3,397,965 | G→T | 6.7% | V138V (GTC→GTA) ‡ | yhdE ← | dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo‑UTP pyrophosphatase |
| RA | 3,397,967 | C→T | 6.8% | V138I (GTC→ATC) ‡ | yhdE ← | dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo‑UTP pyrophosphatase |
| RA | 3,397,968 | A→G | 7.7% | Y137Y (TAT→TAC) ‡ | yhdE ← | dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo‑UTP pyrophosphatase |
| RA | 3,397,970 | A→C | 6.8% | Y137D (TAT→GAT) ‡ | yhdE ← | dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo‑UTP pyrophosphatase |
| RA | 3,397,974 | C→A | 7.2% | A135A (GCG→GCT) | yhdE ← | dTTP/UTP pyrophosphatase; m(5)UTP/m(5)CTP/pseudo‑UTP pyrophosphatase |
| RA | 3,407,293 | T→A | 10.7% | intergenic (+27/‑82) | accC → / → yhdT | acetyl‑CoA carboxylase, biotin carboxylase subunit/DUF997 family putative inner membrane protein |
| RA | 3,407,294 | T→A | 10.7% | intergenic (+28/‑81) | accC → / → yhdT | acetyl‑CoA carboxylase, biotin carboxylase subunit/DUF997 family putative inner membrane protein |
| RA | 3,407,295 | T→A | 10.8% | intergenic (+29/‑80) | accC → / → yhdT | acetyl‑CoA carboxylase, biotin carboxylase subunit/DUF997 family putative inner membrane protein |
| RA | 3,423,390 | C→T | 5.3% | intergenic (+196/+33) | yhdZ → / ← rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| RA | 3,423,397 | T→G | 5.7% | intergenic (+203/+26) | yhdZ → / ← rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| RA | 3,423,620 | A→G | 8.2% | noncoding (36/76 nt) | thrV ← | tRNA‑Thr |
| RA | 3,423,621 | C→G | 9.1% | noncoding (35/76 nt) | thrV ← | tRNA‑Thr |
| RA | 3,423,622 | C→T | 8.3% | noncoding (34/76 nt) | thrV ← | tRNA‑Thr |
| RA | 3,437,908 | T→A | 5.4% | intergenic (+14/‑116) | trkA → / → mscL | NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance |
| RA | 3,437,910 | A→T | 5.3% | intergenic (+16/‑114) | trkA → / → mscL | NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance |
| RA | 3,437,911 | T→A | 5.2% | intergenic (+17/‑113) | trkA → / → mscL | NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance |
| RA | 3,439,588 | G→C | 9.5% | intergenic (‑79/+28) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| RA | 3,439,589 | G→C | 9.5% | intergenic (‑80/+27) | yhdN ← / ← rplQ | DUF1992 family protein/50S ribosomal subunit protein L17 |
| RA | 3,441,060 | T→C | 10.1% | K206E (AAG→GAG) | rpsD ← | 30S ribosomal subunit protein S4 |
| RA | 3,441,061 | G→C | 10.0% | S205S (TCC→TCG) ‡ | rpsD ← | 30S ribosomal subunit protein S4 |
| RA | 3,441,062 | G→A | 10.1% | S205F (TCC→TTC) ‡ | rpsD ← | 30S ribosomal subunit protein S4 |
| RA | 3,451,404 | T→G | 6.1% | D94A (GAC→GCC) | rplW ← | 50S ribosomal subunit protein L23 |
| RA | 3,470,106 | C→T | 7.8% | intergenic (‑253/+39) | chiA ← / ← tufA | periplasmic endochitinase/translation elongation factor EF‑Tu 1 |
| RA | 3,470,107 | G→T | 7.8% | intergenic (‑254/+38) | chiA ← / ← tufA | periplasmic endochitinase/translation elongation factor EF‑Tu 1 |
| RA | 3,470,108 | A→C | 8.0% | intergenic (‑255/+37) | chiA ← / ← tufA | periplasmic endochitinase/translation elongation factor EF‑Tu 1 |
| RA | 3,470,109 | A→G | 8.0% | intergenic (‑256/+36) | chiA ← / ← tufA | periplasmic endochitinase/translation elongation factor EF‑Tu 1 |
| RA | 3,471,357 | C→T | 5.6% | intergenic (‑28/+43) | tufA ← / ← fusA | translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding |
| RA | 3,471,361 | T→G | 5.3% | intergenic (‑32/+39) | tufA ← / ← fusA | translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding |
| RA | 3,471,362 | C→A | 5.4% | intergenic (‑33/+38) | tufA ← / ← fusA | translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding |
| RA | 3,471,366 | A→G | 5.0% | intergenic (‑37/+34) | tufA ← / ← fusA | translation elongation factor EF‑Tu 1/protein chain elongation factor EF‑G, GTP‑binding |
| RA | 3,477,878 | T→A | 6.0% | intergenic (+20/+29) | slyX → / ← slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| RA | 3,483,242 | G→C | 6.0% | S14T (AGC→ACC) ‡ | yheT → | UPF0017 family putative hydrolase |
| RA | 3,483,243 | C→T | 6.2% | S14S (AGC→AGT) ‡ | yheT → | UPF0017 family putative hydrolase |
| RA | 3,483,244 | A→G | 6.3% | S15G (AGT→GGT) ‡ | yheT → | UPF0017 family putative hydrolase |
| RA | 3,483,245 | G→C | 6.7% | S15T (AGT→ACT) ‡ | yheT → | UPF0017 family putative hydrolase |
| RA | 3,486,771 | T→C | 5.0% | intergenic (+19/‑20) | crp → / → yhfK | cAMP‑activated global transcription factor, mediator of catabolite repression/putative transporter, FUSC superfamily inner membrane protein |
| RA | 3,491,704 | G→T | 7.3% | intergenic (‑84/+21) | yhfG ← / ← ppiA | putative antitoxin for Fic/peptidyl‑prolyl cis‑trans isomerase A (rotamase A) |
| RA | 3,491,705 | A→C | 6.4% | intergenic (‑85/+20) | yhfG ← / ← ppiA | putative antitoxin for Fic/peptidyl‑prolyl cis‑trans isomerase A (rotamase A) |
| RA | 3,512,306 | G→C | 5.1% | I13M (ATC→ATG) | yhfZ ← | putative DNA‑binding transcriptional regulator |
| RA | 3,512,593 | C→T | 5.2% | intergenic (‑249/+41) | yhfZ ← / ← trpS | putative DNA‑binding transcriptional regulator/tryptophanyl‑tRNA synthetase |
| RA | 3,515,785 | G→T | 6.2% | L43L (CTC→CTA) ‡ | dam ← | DNA adenine methyltransferase |
| RA | 3,515,786 | A→C | 7.3% | L43R (CTC→CGC) ‡ | dam ← | DNA adenine methyltransferase |
| RA | 3,515,787 | G→T | 10.5% | L43I (CTC→ATC) ‡ | dam ← | DNA adenine methyltransferase |
| RA | 3,515,788 | A→C | 6.9% | F42L (TTT→TTG) | dam ← | DNA adenine methyltransferase |
| RA | 3,522,778 | C→G | 6.1% | intergenic (‑27/‑93) | hofM ← / → mrcA | DNA catabolic putative pilus assembly protein/penicillin‑binding protein 1a, murein transglycosylase and transpeptidase |
| RA | 3,522,779 | T→A | 5.5% | intergenic (‑28/‑92) | hofM ← / → mrcA | DNA catabolic putative pilus assembly protein/penicillin‑binding protein 1a, murein transglycosylase and transpeptidase |
| RA | 3,522,780 | C→G | 5.7% | intergenic (‑29/‑91) | hofM ← / → mrcA | DNA catabolic putative pilus assembly protein/penicillin‑binding protein 1a, murein transglycosylase and transpeptidase |
| RA | 3,525,436 | T→C | 5.8% | intergenic (+13/+153) | mrcA → / ← nudE | penicillin‑binding protein 1a, murein transglycosylase and transpeptidase/adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase |
| RA | 3,525,437 | T→G | 6.2% | intergenic (+14/+152) | mrcA → / ← nudE | penicillin‑binding protein 1a, murein transglycosylase and transpeptidase/adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase |
| RA | 3,525,438 | C→A | 5.1% | intergenic (+15/+151) | mrcA → / ← nudE | penicillin‑binding protein 1a, murein transglycosylase and transpeptidase/adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase |
| RA | 3,525,439 | G→A | 5.0% | intergenic (+16/+150) | mrcA → / ← nudE | penicillin‑binding protein 1a, murein transglycosylase and transpeptidase/adenosine nucleotide hydrolase; Ap3A/Ap2A/ADP‑ribose/NADH hydrolase |
| RA | 3,530,671 | A→C | 11.1% | intergenic (+19/+44) | hslO → / ← yhgE | heat shock protein Hsp33/DUF4153 family putative inner membrane protein |
| RA | 3,530,672 | G→C | 10.1% | intergenic (+20/+43) | hslO → / ← yhgE | heat shock protein Hsp33/DUF4153 family putative inner membrane protein |
| RA | 3,530,673 | G→C | 10.1% | intergenic (+21/+42) | hslO → / ← yhgE | heat shock protein Hsp33/DUF4153 family putative inner membrane protein |
| RA | 3,530,674 | G→T | 9.4% | intergenic (+22/+41) | hslO → / ← yhgE | heat shock protein Hsp33/DUF4153 family putative inner membrane protein |
| RA | 3,537,322 | T→A | 7.2% | intergenic (+34/‑63) | greB → / → yhgF | transcript cleavage factor/putative transcriptional accessory protein |
| RA | 3,537,323 | T→A | 6.1% | intergenic (+35/‑62) | greB → / → yhgF | transcript cleavage factor/putative transcriptional accessory protein |
| RA | 3,537,324 | T→A | 6.4% | intergenic (+36/‑61) | greB → / → yhgF | transcript cleavage factor/putative transcriptional accessory protein |
| RA | 3,537,325 | T→A | 6.4% | intergenic (+37/‑60) | greB → / → yhgF | transcript cleavage factor/putative transcriptional accessory protein |
| RA | 3,539,815 | A→T | 6.4% | intergenic (+109/‑348) | yhgF → / → feoA | putative transcriptional accessory protein/ferrous iron transporter, protein A |
| RA | 3,539,816 | T→A | 6.5% | intergenic (+110/‑347) | yhgF → / → feoA | putative transcriptional accessory protein/ferrous iron transporter, protein A |
| RA | 3,539,817 | A→T | 5.9% | intergenic (+111/‑346) | yhgF → / → feoA | putative transcriptional accessory protein/ferrous iron transporter, protein A |
| RA | 3,544,689 | A→T | 6.2% | R52R (CGT→CGA) | bioH ← | pimeloyl‑ACP methyl ester carboxylesterase |
| RA | 3,544,692 | C→G | 5.9% | G51G (GGG→GGC) ‡ | bioH ← | pimeloyl‑ACP methyl ester carboxylesterase |
| RA | 3,544,693 | C→G | 6.6% | G51A (GGG→GCG) ‡ | bioH ← | pimeloyl‑ACP methyl ester carboxylesterase |
| RA | 3,544,696 | A→T | 5.5% | F50Y (TTC→TAC) | bioH ← | pimeloyl‑ACP methyl ester carboxylesterase |
| RA | 3,560,455:1 | +G | 100% | intergenic (‑2/+1) | glpR ← / ← glpR | pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon/pseudogene, DNA‑binding transcriptional repressor;regulator; Energy metabolism, carbon: Anaerobic respiration; repressor of the glp operon |
| RA | 3,563,539 | T→C | 5.3% | intergenic (+21/+248) | glpD → / ← yzgL | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding/pseudogene, periplasmic solute binding protein homology |
| RA | 3,569,431 | A→G | 6.6% | I630T (ATT→ACT) | glgX ← | glycogen debranching enzyme |
| RA | 3,569,437 | T→C | 6.4% | H628R (CAC→CGC) | glgX ← | glycogen debranching enzyme |
| RA | 3,585,060 | C→G | 6.0% | intergenic (+17/+21) | yrhB → / ← ggt | stable heat shock chaperone/gamma‑glutamyltranspeptidase |
| RA | 3,585,061 | C→T | 6.2% | intergenic (+18/+20) | yrhB → / ← ggt | stable heat shock chaperone/gamma‑glutamyltranspeptidase |
| RA | 3,585,062 | A→G | 5.9% | intergenic (+19/+19) | yrhB → / ← ggt | stable heat shock chaperone/gamma‑glutamyltranspeptidase |
| RA | 3,585,063 | C→G | 5.4% | intergenic (+20/+18) | yrhB → / ← ggt | stable heat shock chaperone/gamma‑glutamyltranspeptidase |
| RA | 3,600,988 | T→A | 5.3% | intergenic (‑205/+40) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,600,990 | C→T | 5.7% | intergenic (‑207/+38) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,600,993 | A→G | 5.8% | intergenic (‑210/+35) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,600,994 | A→T | 5.4% | intergenic (‑211/+34) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,600,995 | C→T | 6.7% | intergenic (‑212/+33) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,600,998 | A→G | 5.9% | intergenic (‑215/+30) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,601,000 | T→A | 5.8% | intergenic (‑217/+28) | rpoH ← / ← ftsX | RNA polymerase, sigma 32 (sigma H) factor/putative ABC transporter permease |
| RA | 3,601,505 | A→C | 5.2% | R194R (CGT→CGG) ‡ | ftsX ← | putative ABC transporter permease |
| RA | 3,601,506 | C→G | 5.2% | R194P (CGT→CCT) ‡ | ftsX ← | putative ABC transporter permease |
| RA | 3,601,507 | G→T | 5.2% | R194S (CGT→AGT) ‡ | ftsX ← | putative ABC transporter permease |
| RA | 3,610,537 | A→C | 6.1% | P399P (CCT→CCG) | yhhS ← | putative arabinose efflux transporter |
| RA | 3,610,540 | G→A | 6.2% | V398V (GTC→GTT) | yhhS ← | putative arabinose efflux transporter |
| RA | 3,610,543 | G→A | 6.2% | H397H (CAC→CAT) ‡ | yhhS ← | putative arabinose efflux transporter |
| RA | 3,610,544 | T→C | 6.4% | H397R (CAC→CGC) ‡ | yhhS ← | putative arabinose efflux transporter |
| RA | 3,610,547 | T→C | 6.2% | E396G (GAA→GGA) | yhhS ← | putative arabinose efflux transporter |
| RA | 3,610,550 | G→T | 6.3% | P395Q (CCG→CAG) | yhhS ← | putative arabinose efflux transporter |
| RA | 3,616,399 | T→G | 8.7% | V73G (GTG→GGG) | nikC → | nickel ABC transporter permease |
| RA | 3,629,495 | A→T | 5.5% | L15Q (CTG→CAG) | rbbA ← | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| RA | 3,630,661 | A→T | 10.3% | intergenic (‑59/+307) | yhiI ← / ← yhiJ | putative membrane fusion protein (MFP) of efflux pump/DUF4049 family protein |
| RA | 3,636,747 | T→C | 5.2% | T222A (ACC→GCC) | yhiN ← | putative oxidoreductase |
| RA | 3,636,748 | G→A | 5.2% | G221G (GGC→GGT) | yhiN ← | putative oxidoreductase |
| RA | 3,639,338 | T→C | 6.3% | intergenic (+197/+47) | pitA → / ← uspB | phosphate transporter, low‑affinity; tellurite importer/universal stress (ethanol tolerance) protein B |
| RA | 3,639,343 | T→A | 5.4% | intergenic (+202/+42) | pitA → / ← uspB | phosphate transporter, low‑affinity; tellurite importer/universal stress (ethanol tolerance) protein B |
| RA | 3,639,344 | T→A | 5.4% | intergenic (+203/+41) | pitA → / ← uspB | phosphate transporter, low‑affinity; tellurite importer/universal stress (ethanol tolerance) protein B |
| RA | 3,639,349 | G→A | 5.4% | intergenic (+208/+36) | pitA → / ← uspB | phosphate transporter, low‑affinity; tellurite importer/universal stress (ethanol tolerance) protein B |
| RA | 3,642,358 | T→A | 10.1% | intergenic (+27/+22) | dtpB → / ← rsmJ | dipeptide and tripeptide permease B/16S rRNA m(2)G1516 methyltransferase, SAM‑dependent |
| RA | 3,642,361 | T→A | 8.2% | intergenic (+30/+19) | dtpB → / ← rsmJ | dipeptide and tripeptide permease B/16S rRNA m(2)G1516 methyltransferase, SAM‑dependent |
| RA | 3,643,230 | A→G | 6.7% | G651G (GGT→GGC) | prlC ← | oligopeptidase A |
| RA | 3,643,234 | C→T | 6.9% | G650D (GGC→GAC) ‡ | prlC ← | oligopeptidase A |
| RA | 3,643,235 | C→G | 6.9% | G650R (GGC→CGC) ‡ | prlC ← | oligopeptidase A |
| RA | 3,643,236 | A→G | 6.6% | R649R (CGT→CGC) | prlC ← | oligopeptidase A |
| RA | 3,643,240 | C→T | 6.6% | S648N (AGC→AAC) | prlC ← | oligopeptidase A |
| RA | 3,648,128 | G→T | 7.2% | noncoding (66/84 nt) | agrA → | inactive antisense sRNA |
| RA | 3,648,129 | C→T | 7.7% | noncoding (67/84 nt) | agrA → | inactive antisense sRNA |
| RA | 3,648,130 | A→T | 7.7% | noncoding (68/84 nt) | agrA → | inactive antisense sRNA |
| RA | 3,648,131 | A→G | 7.8% | noncoding (69/84 nt) | agrA → | inactive antisense sRNA |
| RA | 3,648,132 | A→C | 7.6% | noncoding (70/84 nt) | agrA → | inactive antisense sRNA |
| RA | 3,648,359 | G→T | 6.0% | noncoding (66/84 nt) | agrB → | antisense sRNA antitoxin for the DinQ toxin |
| RA | 3,648,360 | C→T | 5.2% | noncoding (67/84 nt) | agrB → | antisense sRNA antitoxin for the DinQ toxin |
| RA | 3,648,361 | A→T | 5.2% | noncoding (68/84 nt) | agrB → | antisense sRNA antitoxin for the DinQ toxin |
| RA | 3,648,362 | A→G | 5.4% | noncoding (69/84 nt) | agrB → | antisense sRNA antitoxin for the DinQ toxin |
| RA | 3,648,363 | A→C | 5.3% | noncoding (70/84 nt) | agrB → | antisense sRNA antitoxin for the DinQ toxin |
| RA | 3,655,922 | C→T | 7.0% | intergenic (‑20/+44) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,655,929 | A→T | 5.8% | intergenic (‑27/+37) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,655,932 | G→A | 6.4% | intergenic (‑30/+34) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,655,933 | C→G | 6.6% | intergenic (‑31/+33) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,655,934 | T→C | 6.0% | intergenic (‑32/+32) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,655,937 | A→T | 6.8% | intergenic (‑35/+29) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,655,944 | A→G | 6.2% | intergenic (‑42/+22) | yhiD ← / ← hdeB | putative Mg(2+) transport ATPase, inner membrane protein/acid‑resistance protein |
| RA | 3,657,599 | T→A | 7.0% | intergenic (+32/+387) | hdeD → / ← arrS | acid‑resistance membrane protein/antisense sRNA ArrS, function unknown |
| RA | 3,657,601 | G→C | 6.5% | intergenic (+34/+385) | hdeD → / ← arrS | acid‑resistance membrane protein/antisense sRNA ArrS, function unknown |
| RA | 3,657,603 | T→A | 7.3% | intergenic (+36/+383) | hdeD → / ← arrS | acid‑resistance membrane protein/antisense sRNA ArrS, function unknown |
| RA | 3,658,002 | C→T | 5.4% | noncoding (53/69 nt) | arrS ← | antisense sRNA ArrS, function unknown |
| RA | 3,658,003 | C→G | 5.5% | noncoding (52/69 nt) | arrS ← | antisense sRNA ArrS, function unknown |
| RA | 3,658,004 | A→G | 5.5% | noncoding (51/69 nt) | arrS ← | antisense sRNA ArrS, function unknown |
| RA | 3,663,547 | T→C | 10.6% | intergenic (+20/+343) | mdtF → / ← gadW | anaerobic multidrug efflux transporter, ArcA‑regulated/transcriptional activator of gadA and gadBC; repressor of gadX |
| RA | 3,663,553 | A→C | 10.1% | intergenic (+26/+337) | mdtF → / ← gadW | anaerobic multidrug efflux transporter, ArcA‑regulated/transcriptional activator of gadA and gadBC; repressor of gadX |
| RA | 3,663,555 | G→T | 10.3% | intergenic (+28/+335) | mdtF → / ← gadW | anaerobic multidrug efflux transporter, ArcA‑regulated/transcriptional activator of gadA and gadBC; repressor of gadX |
| RA | 3,663,556 | A→C | 9.3% | intergenic (+29/+334) | mdtF → / ← gadW | anaerobic multidrug efflux transporter, ArcA‑regulated/transcriptional activator of gadA and gadBC; repressor of gadX |
| RA | 3,663,558 | G→T | 10.4% | intergenic (+31/+332) | mdtF → / ← gadW | anaerobic multidrug efflux transporter, ArcA‑regulated/transcriptional activator of gadA and gadBC; repressor of gadX |
| RA | 3,663,564 | G→A | 10.1% | intergenic (+37/+326) | mdtF → / ← gadW | anaerobic multidrug efflux transporter, ArcA‑regulated/transcriptional activator of gadA and gadBC; repressor of gadX |
| RA | 3,674,388 | G→A | 5.2% | intergenic (+13/‑398) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/putative MFS transporter; membrane protein |
| RA | 3,674,389 | C→A | 5.7% | intergenic (+14/‑397) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/putative MFS transporter; membrane protein |
| RA | 3,674,395 | A→T | 6.7% | intergenic (+20/‑391) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/putative MFS transporter; membrane protein |
| RA | 3,674,396 | A→T | 6.7% | intergenic (+21/‑390) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/putative MFS transporter; membrane protein |
| RA | 3,674,402 | T→G | 6.7% | intergenic (+27/‑384) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/putative MFS transporter; membrane protein |
| RA | 3,674,403 | T→C | 6.2% | intergenic (+28/‑383) | yhjD → / → yhjE | inner membrane putative BrbK family alternate lipid exporter/putative MFS transporter; membrane protein |
| RA | 3,676,195 | A→G | 5.2% | intergenic (+87/+95) | yhjE → / ← yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,676,202 | T→G | 5.6% | intergenic (+94/+88) | yhjE → / ← yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,676,203 | C→A | 5.1% | intergenic (+95/+87) | yhjE → / ← yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,676,209 | G→T | 6.9% | intergenic (+101/+81) | yhjE → / ← yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,676,210 | C→T | 5.4% | intergenic (+102/+80) | yhjE → / ← yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,676,271 | A→T | 6.5% | intergenic (+163/+19) | yhjE → / ← yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,689,667 | T→A | 5.7% | T199S (ACC→TCC) | bcsZ ← | endo‑1,4‑D‑glucanase |
| RA | 3,700,416 | T→C | 7.1% | intergenic (+215/‑147) | rdlD → / → yhjV | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR‑D repeat, with toxic peptide LdrD/putative transporter |
| RA | 3,700,418 | G→A | 7.1% | intergenic (+217/‑145) | rdlD → / → yhjV | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR‑D repeat, with toxic peptide LdrD/putative transporter |
| RA | 3,700,419 | T→C | 7.8% | intergenic (+218/‑144) | rdlD → / → yhjV | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR‑D repeat, with toxic peptide LdrD/putative transporter |
| RA | 3,700,421 | G→A | 7.3% | intergenic (+220/‑142) | rdlD → / → yhjV | sRNA antisense regulator affects LdrD translation; proposed addiction module in LDR‑D repeat, with toxic peptide LdrD/putative transporter |
| RA | 3,701,840 | A→G | 6.4% | intergenic (+6/+24) | yhjV → / ← dppF | putative transporter/dipeptide/heme ABC transporter ATPas |
| RA | 3,701,843 | Δ1 bp | 6.5% | intergenic (+9/+21) | yhjV → / ← dppF | putative transporter/dipeptide/heme ABC transporter ATPas |
| RA | 3,701,847:1 | +C | 7.5% | intergenic (+13/+17) | yhjV → / ← dppF | putative transporter/dipeptide/heme ABC transporter ATPas |
| RA | 3,701,850 | C→T | 7.5% | intergenic (+16/+14) | yhjV → / ← dppF | putative transporter/dipeptide/heme ABC transporter ATPas |
| RA | 3,708,595 | G→A | 5.4% | intergenic (‑890/+21) | dppA ← / ← proK | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor/tRNA‑Pro |
| RA | 3,710,635 | G→T | 7.1% | intergenic (‑160/+164) | eptB ← / ← yhjX | KDO phosphoethanolamine transferase, Ca(2+)‑inducible/pyruvate‑inducible inner membrane protein, putative transporter |
| RA | 3,714,163:1 | +T | 9.7% | coding (2232/2334 nt) | bisC ← | biotin sulfoxide reductase |
| RA | 3,714,168 | Δ1 bp | 9.2% | coding (2227/2334 nt) | bisC ← | biotin sulfoxide reductase |
| RA | 3,716,508 | A→T | 5.4% | intergenic (‑114/‑39) | bisC ← / → yiaD | biotin sulfoxide reductase/multicopy suppressor of bamB; outer membrane lipoprotein |
| RA | 3,720,294 | T→C | 5.9% | intergenic (+33/+154) | cspA → / ← hokA | RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small |
| RA | 3,720,299 | T→A | 7.2% | intergenic (+38/+149) | cspA → / ← hokA | RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small |
| RA | 3,720,300 | T→A | 7.0% | intergenic (+39/+148) | cspA → / ← hokA | RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small |
| RA | 3,720,305 | G→A | 6.0% | intergenic (+44/+143) | cspA → / ← hokA | RNA chaperone and antiterminator, cold‑inducible/toxic polypeptide, small |
| RA | 3,720,793 | G→T | 6.6% | Q38H (CAG→CAT) | insJ → | IS150 transposase A |
| RA | 3,720,797 | A→C | 5.4% | R40R (AGG→CGG) ‡ | insJ → | IS150 transposase A |
| RA | 3,720,798 | G→T | 5.4% | R40M (AGG→ATG) ‡ | insJ → | IS150 transposase A |
| RA | 3,720,802 | A→C | 5.5% | T41T (ACA→ACC) | insJ → | IS150 transposase A |
| RA | 3,722,300 | G→T | 5.8% | intergenic (+195/+28) | sokA → / ← glyS | pseudogene, sRNA antisense regulator blocking mokA/hokA translation/glycine tRNA synthetase, beta subunit |
| RA | 3,722,301 | A→C | 5.7% | intergenic (+196/+27) | sokA → / ← glyS | pseudogene, sRNA antisense regulator blocking mokA/hokA translation/glycine tRNA synthetase, beta subunit |
| RA | 3,729,658 | C→A | 5.3% | A370S (GCA→TCA) | xylA ← | D‑xylose isomerase |
| RA | 3,732,136 | A→C | 5.6% | intergenic (+13/‑65) | xylF → / → xylG | D‑xylose transporter subunit/D‑xylose ABC transporter dual domain ATPase |
| RA | 3,732,139 | G→T | 5.0% | intergenic (+16/‑62) | xylF → / → xylG | D‑xylose transporter subunit/D‑xylose ABC transporter dual domain ATPase |
| RA | 3,732,141 | G→C | 5.0% | intergenic (+18/‑60) | xylF → / → xylG | D‑xylose transporter subunit/D‑xylose ABC transporter dual domain ATPase |
| RA | 3,732,146 | G→T | 5.2% | intergenic (+23/‑55) | xylF → / → xylG | D‑xylose transporter subunit/D‑xylose ABC transporter dual domain ATPase |
| RA | 3,757,939 | Δ1 bp | 7.3% | intergenic (‑112/+78) | yiaY ← / ← selB | L‑threonine dehydrogenase/selenocysteinyl‑tRNA‑specific translation factor |
| RA | 3,757,942 | C→A | 8.6% | intergenic (‑115/+75) | yiaY ← / ← selB | L‑threonine dehydrogenase/selenocysteinyl‑tRNA‑specific translation factor |
| RA | 3,757,945 | T→G | 6.9% | intergenic (‑118/+72) | yiaY ← / ← selB | L‑threonine dehydrogenase/selenocysteinyl‑tRNA‑specific translation factor |
| RA | 3,757,947:1 | +T | 7.4% | intergenic (‑120/+70) | yiaY ← / ← selB | L‑threonine dehydrogenase/selenocysteinyl‑tRNA‑specific translation factor |
| RA | 3,781,051 | C→G | 5.9% | intergenic (+34/‑164) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| RA | 3,786,896 | T→C | 6.8% | V20A (GTT→GCT) | envC → | activator of AmiB,C murein hydrolases, septal ring factor |
| RA | 3,786,898 | C→A | 6.8% | L21I (CTT→ATT) ‡ | envC → | activator of AmiB,C murein hydrolases, septal ring factor |
| RA | 3,786,899 | T→A | 6.7% | L21H (CTT→CAT) ‡ | envC → | activator of AmiB,C murein hydrolases, septal ring factor |
| RA | 3,786,900 | T→G | 6.6% | L21L (CTT→CTG) ‡ | envC → | activator of AmiB,C murein hydrolases, septal ring factor |
| RA | 3,786,902 | G→A | 6.2% | S22N (AGC→AAC) | envC → | activator of AmiB,C murein hydrolases, septal ring factor |
| RA | 3,790,300 | A→T | 5.8% | intergenic (‑219/+20) | waaH ← / ← tdh | LPS(HepIII)‑glucuronic acid glycosyltransferase/L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
| RA | 3,790,303 | A→T | 5.9% | intergenic (‑222/+17) | waaH ← / ← tdh | LPS(HepIII)‑glucuronic acid glycosyltransferase/L‑threonine 3‑dehydrogenase, NAD(P)‑binding |
| RA | 3,792,765 | C→T | 6.5% | intergenic (‑214/+61) | kbl ← / ← yibB | glycine C‑acetyltransferase/YibB family protein, function unknown |
| RA | 3,792,766 | A→T | 7.2% | intergenic (‑215/+60) | kbl ← / ← yibB | glycine C‑acetyltransferase/YibB family protein, function unknown |
| RA | 3,792,767 | A→T | 6.3% | intergenic (‑216/+59) | kbl ← / ← yibB | glycine C‑acetyltransferase/YibB family protein, function unknown |
| RA | 3,792,768 | A→G | 6.4% | intergenic (‑217/+58) | kbl ← / ← yibB | glycine C‑acetyltransferase/YibB family protein, function unknown |
| RA | 3,796,006 | T→C | 8.8% | S10P (TCG→CCG) ‡ | waaC → | ADP‑heptose:LPS heptosyl transferase I |
| RA | 3,796,008 | G→C | 9.5% | S10S (TCG→TCC) ‡ | waaC → | ADP‑heptose:LPS heptosyl transferase I |
| RA | 3,796,011 | G→C | 9.2% | M11I (ATG→ATC) | waaC → | ADP‑heptose:LPS heptosyl transferase I |
| RA | 3,796,013 | G→A | 9.3% | G12D (GGC→GAC) | waaC → | ADP‑heptose:LPS heptosyl transferase I |
| RA | 3,798,234 | A→T | 7.1% | intergenic (+27/+5) | waaL → / ← waaU | O‑antigen ligase/lipopolysaccharide core biosynthesis |
| RA | 3,798,235 | A→T | 7.0% | intergenic (+28/+4) | waaL → / ← waaU | O‑antigen ligase/lipopolysaccharide core biosynthesis |
| RA | 3,809,354 | A→G | 6.9% | E272G (GAA→GGA) | waaA → | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase (KDO transferase) |
| RA | 3,809,356 | C→A | 6.3% | R273S (CGC→AGC) | waaA → | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase (KDO transferase) |
| RA | 3,809,359 | T→G | 6.0% | F274V (TTC→GTC) ‡ | waaA → | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase (KDO transferase) |
| RA | 3,809,361 | C→T | 6.8% | F274F (TTC→TTT) ‡ | waaA → | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase (KDO transferase) |
| RA | 3,811,212 | C→T | 7.1% | intergenic (‑60/+38) | mutM ← / ← rpmG | formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,811,216 | C→T | 7.0% | intergenic (‑64/+34) | mutM ← / ← rpmG | formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,811,217 | G→C | 7.6% | intergenic (‑65/+33) | mutM ← / ← rpmG | formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,811,218 | G→C | 7.0% | intergenic (‑66/+32) | mutM ← / ← rpmG | formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,811,219 | A→G | 7.0% | intergenic (‑67/+31) | mutM ← / ← rpmG | formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,811,223 | A→G | 7.0% | intergenic (‑71/+27) | mutM ← / ← rpmG | formamidopyrimidine/5‑formyluracil/ 5‑hydroxymethyluracil DNA glycosylase/50S ribosomal subunit protein L33 |
| RA | 3,815,816 | C→G | 6.6% | intergenic (‑48/+18) | pyrE ← / ← rph | orotate phosphoribosyltransferase/ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH |
| RA | 3,815,819 | C→G | 6.6% | intergenic (‑51/+15) | pyrE ← / ← rph | orotate phosphoribosyltransferase/ribonuclease PH (defective);enzyme; Degradation of RNA; RNase PH |
| RA | 3,821,489 | T→A | 6.9% | I21N (ATT→AAT) | gmk → | guanylate kinase |
| RA | 3,831,757 | C→T | 10.2% | A434V (GCC→GTC) | yicH → | putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,831,761 | C→G | 10.2% | A435A (GCC→GCG) | yicH → | putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,831,764 | C→G | 10.2% | A436A (GCC→GCG) | yicH → | putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,831,768 | A→G | 8.9% | T438A (ACA→GCA) | yicH → | putative inner membrane‑anchored periplasmic AsmA family protein |
| RA | 3,832,188 | A→T | 5.2% | intergenic (+22/+31) | yicH → / ← yicI | putative inner membrane‑anchored periplasmic AsmA family protein/putative alpha‑glucosidase |
| RA | 3,832,191 | C→G | 5.7% | intergenic (+25/+28) | yicH → / ← yicI | putative inner membrane‑anchored periplasmic AsmA family protein/putative alpha‑glucosidase |
| RA | 3,843,569 | A→G | 5.0% | I74T (ATC→ACC) | adeQ ← | adenine permease, high affinity; adenine:H+ symporter |
| RA | 3,843,572 | C→T | 5.2% | G73D (GGT→GAT) | adeQ ← | adenine permease, high affinity; adenine:H+ symporter |
| RA | 3,880,756 | G→T | 5.3% | R156R (CGA→AGA) | recF ← | gap repair protein |
| RA | 3,888,212 | Δ1 bp | 6.4% | intergenic (+20/‑223) | mnmE → / → tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide |
| RA | 3,888,219 | T→A | 7.8% | intergenic (+27/‑216) | mnmE → / → tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide |
| RA | 3,888,224:1 | +A | 5.8% | intergenic (+32/‑211) | mnmE → / → tnaC | tRNA U34 5‑methylaminomethyl‑2‑thiouridine modification GTPase/tryptophanase leader peptide |
| JC JC | 3,890,075 | IS5 (–) +4 bp | 100% | coding (1346‑1349/1416 nt) | tnaA → | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| RA | 3,891,502 | C→G | 13.1% | intergenic (+19/‑113) | tnaB → / → mdtL | tryptophan transporter of low affinity/multidrug efflux system protein |
| RA | 3,891,504 | T→A | 12.4% | intergenic (+21/‑111) | tnaB → / → mdtL | tryptophan transporter of low affinity/multidrug efflux system protein |
| RA | 3,891,506 | C→G | 12.4% | intergenic (+23/‑109) | tnaB → / → mdtL | tryptophan transporter of low affinity/multidrug efflux system protein |
| RA | 3,900,410 | A→T | 5.4% | P56P (CCT→CCA) | yieL ← | putative xylanase |
| RA | 3,906,826 | T→C | 5.7% | intergenic (‑259/+27) | bglG ← / ← phoU | transcriptional antiterminator of the bgl operon/negative regulator of PhoR/PhoB two‑component regulator |
| RA | 3,906,828 | A→T | 5.8% | intergenic (‑261/+25) | bglG ← / ← phoU | transcriptional antiterminator of the bgl operon/negative regulator of PhoR/PhoB two‑component regulator |
| RA | 3,906,830 | G→A | 5.8% | intergenic (‑263/+23) | bglG ← / ← phoU | transcriptional antiterminator of the bgl operon/negative regulator of PhoR/PhoB two‑component regulator |
| RA | 3,908,500 | G→T | 7.1% | intergenic (‑134/+49) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| RA | 3,908,505 | T→A | 7.9% | intergenic (‑139/+44) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| RA | 3,908,506 | C→G | 8.1% | intergenic (‑140/+43) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| RA | 3,908,507 | T→A | 7.2% | intergenic (‑141/+42) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| RA | 3,908,512 | A→C | 8.3% | intergenic (‑146/+37) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| RA | 3,910,368 | G→C | 5.2% | P11A (CCG→GCG) | pstC ← | phosphate ABC transporter permease |
| RA | 3,915,514 | C→T | 6.0% | intergenic (‑314/+39) | glmU ← / ← atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| RA | 3,915,518 | T→G | 6.4% | intergenic (‑318/+35) | glmU ← / ← atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| RA | 3,915,519 | T→A | 5.4% | intergenic (‑319/+34) | glmU ← / ← atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| RA | 3,915,520 | T→A | 6.0% | intergenic (‑320/+33) | glmU ← / ← atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| RA | 3,915,521 | C→A | 5.3% | intergenic (‑321/+32) | glmU ← / ← atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| RA | 3,918,291 | C→T | 5.2% | intergenic (‑26/+25) | atpG ← / ← atpA | F1 sector of membrane‑bound ATP synthase, gamma subunit/F1 sector of membrane‑bound ATP synthase, alpha subunit |
| RA | 3,918,296 | C→T | 5.4% | intergenic (‑31/+20) | atpG ← / ← atpA | F1 sector of membrane‑bound ATP synthase, gamma subunit/F1 sector of membrane‑bound ATP synthase, alpha subunit |
| RA | 3,918,299 | A→G | 6.0% | intergenic (‑34/+17) | atpG ← / ← atpA | F1 sector of membrane‑bound ATP synthase, gamma subunit/F1 sector of membrane‑bound ATP synthase, alpha subunit |
| RA | 3,918,304 | A→G | 5.1% | intergenic (‑39/+12) | atpG ← / ← atpA | F1 sector of membrane‑bound ATP synthase, gamma subunit/F1 sector of membrane‑bound ATP synthase, alpha subunit |
| RA | 3,918,916 | T→A | 5.8% | K314N (AAA→AAT) ‡ | atpA ← | F1 sector of membrane‑bound ATP synthase, alpha subunit |
| RA | 3,918,918 | T→A | 5.8% | K314* (AAA→TAA) ‡ | atpA ← | F1 sector of membrane‑bound ATP synthase, alpha subunit |
| RA | 3,923,717 | G→A | 6.8% | intergenic (‑37/+27) | rsmG ← / ← mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| RA | 3,923,718 | G→C | 7.3% | intergenic (‑38/+26) | rsmG ← / ← mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| RA | 3,923,719 | G→C | 6.7% | intergenic (‑39/+25) | rsmG ← / ← mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| RA | 3,923,720 | T→C | 6.8% | intergenic (‑40/+24) | rsmG ← / ← mnmG | 16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein/5‑methylaminomethyl‑2‑thiouridine modification at tRNA U34 |
| RA | 3,927,123 | A→T | 6.9% | intergenic (‑120/‑32) | asnC ← / → asnA | transcriptional activator of asnA; autorepressor/asparagine synthetase A |
| RA | 3,927,124 | T→G | 7.0% | intergenic (‑121/‑31) | asnC ← / → asnA | transcriptional activator of asnA; autorepressor/asparagine synthetase A |
| RA | 3,927,125 | C→A | 8.3% | intergenic (‑122/‑30) | asnC ← / → asnA | transcriptional activator of asnA; autorepressor/asparagine synthetase A |
| RA | 3,927,126 | A→T | 6.9% | intergenic (‑123/‑29) | asnC ← / → asnA | transcriptional activator of asnA; autorepressor/asparagine synthetase A |
| RA | 3,933,723 | T→C | 6.5% | C125R (TGT→CGT) ‡ | rbsD → | D‑ribose pyranase |
| RA | 3,933,724 | G→A | 6.5% | C125Y (TGT→TAT) ‡ | rbsD → | D‑ribose pyranase |
| RA | 3,937,181 | T→C | 5.0% | intergenic (+13/‑113) | rbsB → / → rbsK | D‑ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor/ribokinase |
| RA | 3,937,185 | T→C | 5.0% | intergenic (+17/‑109) | rbsB → / → rbsK | D‑ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor/ribokinase |
| RA | 3,937,186 | G→A | 5.1% | intergenic (+18/‑108) | rbsB → / → rbsK | D‑ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor/ribokinase |
| RA | 3,947,332 | A→T | 5.8% | A212A (GCT→GCA) | hdfR ← | flhDC operon transcriptional repressor |
| RA | 3,947,335 | A→T | 5.1% | S211S (TCT→TCA) | hdfR ← | flhDC operon transcriptional repressor |
| RA | 3,954,273 | G→T | 6.2% | E266* (GAA→TAA) ‡ | ilvD → | dihydroxyacid dehydratase |
| RA | 3,954,274 | A→C | 6.3% | E266A (GAA→GCA) ‡ | ilvD → | dihydroxyacid dehydratase |
| RA | 3,959,480 | A→T | 5.8% | intergenic (+35/+52) | ilvC → / ← ppiC | ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C) |
| RA | 3,963,415 | A→C | 8.7% | L272R (CTG→CGG) ‡ | gpp ← | guanosine pentaphosphatase/exopolyphosphatase |
| RA | 3,963,416 | G→T | 8.5% | L272M (CTG→ATG) ‡ | gpp ← | guanosine pentaphosphatase/exopolyphosphatase |
| RA | 3,965,396 | C→T | 5.3% | D79N (GAT→AAT) | rhlB ← | ATP‑dependent RNA helicase |
| RA | 3,965,400 | A→G | 5.2% | I77I (ATT→ATC) | rhlB ← | ATP‑dependent RNA helicase |
| RA | 3,966,768 | G→T | 11.6% | E118* (GAA→TAA) ‡ | rho → | transcription termination factor |
| RA | 3,966,769 | A→T | 11.6% | E118V (GAA→GTA) ‡ | rho → | transcription termination factor |
| RA | 3,966,770 | A→C | 12.4% | E118D (GAA→GAC) ‡ | rho → | transcription termination factor |
| RA | 3,969,429 | A→C | 5.6% | K133N (AAA→AAC) | wzzE → | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| RA | 3,969,434 | A→C | 6.2% | D135A (GAT→GCT) ‡ | wzzE → | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| RA | 3,969,435 | T→A | 6.9% | D135E (GAT→GAA) ‡ | wzzE → | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| RA | 3,969,436 | G→T | 5.7% | A136S (GCG→TCG) | wzzE → | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| RA | 3,969,441 | G→T | 5.4% | A137A (GCG→GCT) | wzzE → | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein |
| RA | 3,970,813 | Δ1 bp | 5.5% | coding (681/1131 nt) | wecB → | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| RA | 3,970,817:1 | +G | 5.5% | coding (685/1131 nt) | wecB → | UDP‑N‑acetyl glucosamine‑2‑epimerase |
| RA | 3,971,996 | T→A | 10.8% | L246Q (CTG→CAG) | wecC → | UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase |
| RA | 3,972,673 | A→C | 8.8% | E51A (GAG→GCG) ‡ | rffG → | dTDP‑glucose 4,6‑dehydratase |
| RA | 3,972,674 | G→T | 6.5% | E51D (GAG→GAT) ‡ | rffG → | dTDP‑glucose 4,6‑dehydratase |
| RA | 3,981,102 | T→A | 8.1% | V72V (GTT→GTA) | yifK → | putative APC family amino acid transporter |
| RA | 3,987,174 | C→G | 5.5% | D237H (GAT→CAT) | hemY ← | putative protoheme IX synthesis protein |
| RA | 3,987,175 | C→G | 5.5% | M236I (ATG→ATC) | hemY ← | putative protoheme IX synthesis protein |
| RA | 3,989,188 | A→T | 5.8% | V214D (GTC→GAC) | hemD ← | uroporphyrinogen III synthase |
| RA | 3,989,193 | C→T | 6.5% | L212L (TTG→TTA) ‡ | hemD ← | uroporphyrinogen III synthase |
| RA | 3,989,195 | A→T | 5.6% | L212M (TTG→ATG) ‡ | hemD ← | uroporphyrinogen III synthase |
| RA | 3,989,197 | A→G | 5.6% | L211P (CTA→CCA) | hemD ← | uroporphyrinogen III synthase |
| RA | 4,002,398 | T→C | 5.8% | intergenic (+22/+21) | corA → / ← yigF | magnesium/nickel/cobalt transporter/DUF2628 family putative inner membrane protein |
| RA | 4,002,400 | T→A | 6.4% | intergenic (+24/+19) | corA → / ← yigF | magnesium/nickel/cobalt transporter/DUF2628 family putative inner membrane protein |
| RA | 4,002,402 | G→A | 5.9% | intergenic (+26/+17) | corA → / ← yigF | magnesium/nickel/cobalt transporter/DUF2628 family putative inner membrane protein |
| RA | 4,009,779 | T→G | 5.3% | L204V (TTG→GTG) | pldB → | lysophospholipase L2 |
| RA | 4,015,333 | A→T | 5.3% | intergenic (+19/+21) | metE → / ← ysgA | 5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase/putative carboxymethylenebutenolidase |
| RA | 4,041,216 | T→C | 6.7% | Q73R (CAG→CGG) ‡ | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis protein B |
| RA | 4,041,217 | G→A | 7.3% | Q73* (CAG→TAG) ‡ | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis protein B |
| RA | 4,041,220 | T→C | 6.7% | S72G (AGC→GGC) | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis protein B |
| RA | 4,041,221 | G→A | 6.7% | A71A (GCC→GCT) | mobB ← | molybdopterin‑guanine dinucleotide biosynthesis protein B |
| RA | 4,047,208 | C→T | 5.9% | R81R (CGC→CGT) | polA → | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease |
| RA | 4,047,212 | C→G | 6.0% | P83A (CCA→GCA) | polA → | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease |
| RA | 4,047,215 | A→T | 6.1% | M84L (ATG→TTG) | polA → | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease |
| RA | 4,047,218 | C→G | 6.1% | P85A (CCG→GCG) | polA → | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease |
| RA | 4,047,222 | A→G | 5.9% | D86G (GAC→GGC) | polA → | 5' to 3' DNA polymerase and 3' to 5'/5' to 3' exonuclease |
| RA | 4,049,986 | G→T | 5.7% | noncoding (88/109 nt) | spf → | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| RA | 4,049,989 | A→C | 5.6% | noncoding (91/109 nt) | spf → | Spot 42 sRNA antisense regulator of galK translation, Hfq‑dependent |
| RA | 4,050,224 | A→G | 8.6% | L181S (TTG→TCG) ‡ | yihA ← | cell division GTP‑binding protein |
| RA | 4,050,225 | A→T | 8.3% | L181M (TTG→ATG) ‡ | yihA ← | cell division GTP‑binding protein |
| RA | 4,050,226 | C→T | 8.5% | S180S (TCG→TCA) | yihA ← | cell division GTP‑binding protein |
| RA | 4,051,259 | G→T | 7.1% | noncoding (224/245 nt) | csrC → | CsrC sRNA sequesters CsrA, a carbon flux regulator |
| RA | 4,051,262 | A→C | 5.7% | noncoding (227/245 nt) | csrC → | CsrC sRNA sequesters CsrA, a carbon flux regulator |
| RA | 4,053,570 | G→T | 6.9% | intergenic (+152/+77) | hemN → / ← yshB | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/uncharacterized protein |
| RA | 4,060,261 | G→T | 8.9% | intergenic (+31/‑186) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| RA | 4,060,264 | A→C | 10.1% | intergenic (+34/‑183) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| RA | 4,070,413 | T→G | 7.9% | intergenic (‑12/+102) | yihR ← / ← yihS | putative sulphoquinovose mutarotase/sulphoquinovose isomerase |
| RA | 4,072,802 | G→T | 5.8% | P257Q (CCG→CAG) | yihU ← | 3‑sulpholactaldehyde (SLA) reductase, NADH‑dependent; gamma‑hydroxybutyrate dehydrogenase, NADH‑dependent |
| RA | 4,072,807 | T→G | 5.4% | P255P (CCA→CCC) | yihU ← | 3‑sulpholactaldehyde (SLA) reductase, NADH‑dependent; gamma‑hydroxybutyrate dehydrogenase, NADH‑dependent |
| RA | 4,072,811 | A→C | 6.0% | V254G (GTG→GGG) | yihU ← | 3‑sulpholactaldehyde (SLA) reductase, NADH‑dependent; gamma‑hydroxybutyrate dehydrogenase, NADH‑dependent |
| RA | 4,072,817 | A→C | 5.2% | L252R (CTG→CGG) | yihU ← | 3‑sulpholactaldehyde (SLA) reductase, NADH‑dependent; gamma‑hydroxybutyrate dehydrogenase, NADH‑dependent |
| RA | 4,074,839 | T→C | 5.9% | H57H (CAT→CAC) | yihW → | putative transcriptional regulator for sulphoquinovose utilization |
| RA | 4,080,027 | G→A | 8.6% | intergenic (+58/+272) | yiiF → / ← fdhE | putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein |
| RA | 4,080,028 | C→A | 8.5% | intergenic (+59/+271) | yiiF → / ← fdhE | putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein |
| RA | 4,080,034 | G→T | 7.1% | intergenic (+65/+265) | yiiF → / ← fdhE | putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein |
| RA | 4,080,035 | A→C | 7.3% | intergenic (+66/+264) | yiiF → / ← fdhE | putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein |
| RA | 4,080,041 | T→G | 7.5% | intergenic (+72/+258) | yiiF → / ← fdhE | putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein |
| RA | 4,080,042 | T→C | 6.8% | intergenic (+73/+257) | yiiF → / ← fdhE | putative thymol sensitivity protein, CopG family putative transcriptional regulator/formate dehydrogenase formation protein |
| RA | 4,088,091 | G→C | 11.0% | intergenic (+34/+16) | yiiG → / ← frvR | DUF3829 family lipoprotein/putative frv operon regulator; contains a PTS EIIA domain |
| RA | 4,092,795 | T→G | 5.6% | D10A (GAC→GCC) | frvA ← | putative enzyme IIA component of PTS |
| RA | 4,094,489 | G→A | 12.8% | intergenic (‑217/+234) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,695 | A→G | 5.4% | intergenic (‑423/+28) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,696 | A→C | 5.5% | intergenic (‑424/+27) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,702 | T→G | 6.5% | intergenic (‑430/+21) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,703 | C→A | 6.0% | intergenic (‑431/+20) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,709 | G→T | 6.3% | intergenic (‑437/+14) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,094,710 | C→T | 6.3% | intergenic (‑438/+13) | rhaD ← / ← rhaA | rhamnulose‑1‑phosphate aldolase/L‑rhamnose isomerase |
| RA | 4,106,369 | T→G | 6.6% | intergenic (+49/‑100) | cpxP → / → fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| RA | 4,106,370 | G→C | 5.4% | intergenic (+50/‑99) | cpxP → / → fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| RA | 4,106,371 | C→A | 5.4% | intergenic (+51/‑98) | cpxP → / → fieF | inhibitor of the cpx response; periplasmic adaptor protein/ferrous iron and zinc transporter |
| RA | 4,110,717 | A→T | 10.0% | intergenic (+32/+23) | cdh → / ← tpiA | CDP‑diacylglycerol phosphotidylhydrolase/triosephosphate isomerase |
| RA | 4,110,719 | G→C | 8.8% | intergenic (+34/+21) | cdh → / ← tpiA | CDP‑diacylglycerol phosphotidylhydrolase/triosephosphate isomerase |
| RA | 4,110,721 | A→T | 9.1% | intergenic (+36/+19) | cdh → / ← tpiA | CDP‑diacylglycerol phosphotidylhydrolase/triosephosphate isomerase |
| RA | 4,113,473 | T→C | 6.1% | L61L (TTG→CTG) ‡ | uspD → | stress‑induced protein |
| RA | 4,113,474 | T→A | 6.0% | L61* (TTG→TAG) ‡ | uspD → | stress‑induced protein |
| RA | 4,113,475 | G→A | 6.0% | L61L (TTG→TTA) ‡ | uspD → | stress‑induced protein |
| RA | 4,114,536 | C→T | 7.5% | intergenic (‑64/+33) | fpr ← / ← glpX | ferredoxin‑NADP reductase; flavodoxin reductase/fructose 1,6‑bisphosphatase II |
| RA | 4,114,537 | G→T | 7.1% | intergenic (‑65/+32) | fpr ← / ← glpX | ferredoxin‑NADP reductase; flavodoxin reductase/fructose 1,6‑bisphosphatase II |
| RA | 4,114,538 | A→C | 7.5% | intergenic (‑66/+31) | fpr ← / ← glpX | ferredoxin‑NADP reductase; flavodoxin reductase/fructose 1,6‑bisphosphatase II |
| RA | 4,114,539 | A→G | 7.5% | intergenic (‑67/+30) | fpr ← / ← glpX | ferredoxin‑NADP reductase; flavodoxin reductase/fructose 1,6‑bisphosphatase II |
| RA | 4,118,828 | T→G | 7.6% | intergenic (+68/+17) | zapB → / ← rraA | FtsZ stabilizer, septal ring assembly factor, cell division stimulator/ribonuclease E (RNase E) inhibitor protein |
| RA | 4,118,829 | T→C | 7.9% | intergenic (+69/+16) | zapB → / ← rraA | FtsZ stabilizer, septal ring assembly factor, cell division stimulator/ribonuclease E (RNase E) inhibitor protein |
| RA | 4,118,830 | G→A | 8.0% | intergenic (+70/+15) | zapB → / ← rraA | FtsZ stabilizer, septal ring assembly factor, cell division stimulator/ribonuclease E (RNase E) inhibitor protein |
| RA | 4,118,831 | C→A | 8.8% | intergenic (+71/+14) | zapB → / ← rraA | FtsZ stabilizer, septal ring assembly factor, cell division stimulator/ribonuclease E (RNase E) inhibitor protein |
| RA | 4,127,251 | C→T | 10.7% | intergenic (+26/+35) | rpmE → / ← yiiX | 50S ribosomal subunit protein L31/putative lipid binding hydrolase, DUF830 family protein |
| RA | 4,127,252 | A→G | 10.5% | intergenic (+27/+34) | rpmE → / ← yiiX | 50S ribosomal subunit protein L31/putative lipid binding hydrolase, DUF830 family protein |
| RA | 4,137,909 | A→C | 6.4% | intergenic (‑252/+23) | yijF ← / ← gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,137,910 | C→T | 6.8% | intergenic (‑253/+22) | yijF ← / ← gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,137,911 | A→T | 5.7% | intergenic (‑254/+21) | yijF ← / ← gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,137,912 | A→G | 5.9% | intergenic (‑255/+20) | yijF ← / ← gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,137,913 | G→T | 6.1% | intergenic (‑256/+19) | yijF ← / ← gldA | DUF1287 family protein/glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,138,006 | T→G | 8.3% | T344P (ACG→CCG) | gldA ← | glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,138,011 | C→A | 7.6% | G342V (GGC→GTC) | gldA ← | glycerol dehydrogenase, NAD+ dependent; 1,2‑propanediol:NAD+ oxidoreductase |
| RA | 4,142,509 | T→G | 5.8% | intergenic (‑288/‑21) | frwA ← / → frwC | putative PTS enzyme: Hpr, enzyme I and II components/putative enzyme IIC component of PTS |
| RA | 4,142,512 | C→A | 5.8% | intergenic (‑291/‑18) | frwA ← / → frwC | putative PTS enzyme: Hpr, enzyme I and II components/putative enzyme IIC component of PTS |
| RA | 4,177,171 | T→A | 8.3% | intergenic (+43/‑187) | tufB → / → secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| RA | 4,177,172 | T→A | 8.0% | intergenic (+44/‑186) | tufB → / → secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| RA | 4,183,669 | G→T | 94.0% | G809C (GGT→TGT) | rpoB → | RNA polymerase, beta subunit |
| RA | 4,184,280 | A→C | 7.1% | E1012D (GAA→GAC) | rpoB → | RNA polymerase, beta subunit |
| RA | 4,185,540 | C→T | 5.9% | P64L (CCG→CTG) | rpoC → | RNA polymerase, beta prime subunit |
| RA | 4,189,525 | C→G | 5.0% | S1392R (AGC→AGG) | rpoC → | RNA polymerase, beta prime subunit |
| RA | 4,189,607 | C→A | 5.3% | intergenic (+34/‑179) | rpoC → / → yjaZ | RNA polymerase, beta prime subunit/stationary phase growth adaptation protein |
| RA | 4,193,286 | G→C | 6.9% | D97E (GAC→GAG) ‡ | thiF ← | adenylyltransferase, modifies ThiS C‑terminus |
| RA | 4,193,287 | T→C | 6.9% | D97G (GAC→GGC) ‡ | thiF ← | adenylyltransferase, modifies ThiS C‑terminus |
| RA | 4,193,290 | G→A | 7.2% | P96L (CCC→CTC) ‡ | thiF ← | adenylyltransferase, modifies ThiS C‑terminus |
| RA | 4,193,291 | G→C | 7.2% | P96A (CCC→GCC) ‡ | thiF ← | adenylyltransferase, modifies ThiS C‑terminus |
| RA | 4,196,352 | G→C | 6.9% | R153G (CGC→GGC) | rsd ← | stationary phase protein, binds sigma 70 RNA polymerase subunit |
| RA | 4,196,354 | G→C | 6.8% | A152G (GCC→GGC) | rsd ← | stationary phase protein, binds sigma 70 RNA polymerase subunit |
| RA | 4,196,356 | G→C | 7.4% | A151A (GCC→GCG) | rsd ← | stationary phase protein, binds sigma 70 RNA polymerase subunit |
| RA | 4,213,182 | A→T | 5.1% | intergenic (+23/‑52) | rrfE → / → yjaA | 5S ribosomal RNA of rrnE operon/stress‑induced protein |
| RA | 4,227,550 | G→A | 7.1% | intergenic (+39/‑181) | metH → / → yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
| RA | 4,227,555 | A→T | 6.0% | intergenic (+44/‑176) | metH → / → yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
| RA | 4,227,560 | T→C | 5.9% | intergenic (+49/‑171) | metH → / → yjbB | homocysteine‑N5‑methyltetrahydrofolate transmethylase, B12‑dependent/putative Na+/Pi‑cotransporter |
| RA | 4,229,433:1 | +G | 7.0% | intergenic (+71/+20) | yjbB → / ← pepE | putative Na+/Pi‑cotransporter/peptidase E, alpha‑aspartyl dipeptidase |
| RA | 4,229,438 | Δ1 bp | 7.0% | intergenic (+76/+15) | yjbB → / ← pepE | putative Na+/Pi‑cotransporter/peptidase E, alpha‑aspartyl dipeptidase |
| RA | 4,232,778 | A→G | 5.7% | F152F (TTT→TTC) ‡ | lysC ← | lysine‑sensitive aspartokinase 3 |
| RA | 4,232,780 | A→T | 5.7% | F152I (TTT→ATT) ‡ | lysC ← | lysine‑sensitive aspartokinase 3 |
| RA | 4,232,782 | C→T | 5.7% | R151Q (CGA→CAA) | lysC ← | lysine‑sensitive aspartokinase 3 |
| RA | 4,241,715 | G→T | 6.9% | C180* (TGC→TGA) ‡ | xylE ← | D‑xylose transporter |
| RA | 4,241,716 | C→G | 7.0% | C180S (TGC→TCC) ‡ | xylE ← | D‑xylose transporter |
| RA | 4,241,717 | A→C | 6.7% | C180G (TGC→GGC) ‡ | xylE ← | D‑xylose transporter |
| RA | 4,245,108 | T→G | 5.1% | intergenic (‑33/+121) | malF ← / ← malE | maltose transporter subunit/maltose transporter subunit |
| RA | 4,245,110 | T→G | 5.1% | intergenic (‑35/+119) | malF ← / ← malE | maltose transporter subunit/maltose transporter subunit |
| RA | 4,245,111 | C→A | 5.1% | intergenic (‑36/+118) | malF ← / ← malE | maltose transporter subunit/maltose transporter subunit |
| RA | 4,256,363 | A→T | 5.5% | L35Q (CTG→CAG) | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| RA | 4,256,369 | A→G | 5.8% | L33P (CTG→CCG) | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| RA | 4,256,371 | T→A | 6.8% | E32D (GAA→GAT) ‡ | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| RA | 4,256,372 | T→A | 5.7% | E32V (GAA→GTA) ‡ | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| RA | 4,256,374 | C→T | 5.8% | P31P (CCG→CCA) | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| RA | 4,256,380 | A→T | 5.9% | P29P (CCT→CCA) | plsB ← | glycerol‑3‑phosphate O‑acyltransferase |
| RA | 4,261,358 | T→A | 6.2% | intergenic (+52/‑311) | yjbM → / → dusA | uncharacterized protein/tRNA‑dihydrouridine synthase A |
| RA | 4,261,359 | T→A | 6.7% | intergenic (+53/‑310) | yjbM → / → dusA | uncharacterized protein/tRNA‑dihydrouridine synthase A |
| RA | 4,270,142 | G→A | 8.4% | intergenic (+15/‑96) | aphA → / → yjbQ | acid phosphatase/phosphotransferase, class B, non‑specific/thiamine phosphate synthase |
| RA | 4,270,144 | G→C | 8.5% | intergenic (+17/‑94) | aphA → / → yjbQ | acid phosphatase/phosphotransferase, class B, non‑specific/thiamine phosphate synthase |
| RA | 4,270,146 | T→C | 8.5% | intergenic (+19/‑92) | aphA → / → yjbQ | acid phosphatase/phosphotransferase, class B, non‑specific/thiamine phosphate synthase |
| RA | 4,275,151 | C→A | 5.1% | intergenic (‑110/‑320) | yjcB ← / → yjcC | putative inner membrane protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 4,275,152 | T→A | 5.4% | intergenic (‑111/‑319) | yjcB ← / → yjcC | putative inner membrane protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 4,275,154 | T→A | 5.8% | intergenic (‑113/‑317) | yjcB ← / → yjcC | putative inner membrane protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 4,275,156 | T→A | 6.2% | intergenic (‑115/‑315) | yjcB ← / → yjcC | putative inner membrane protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 4,275,157 | T→G | 6.3% | intergenic (‑116/‑314) | yjcB ← / → yjcC | putative inner membrane protein/putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| RA | 4,277,940 | A→C | 7.7% | noncoding (127/140 nt) | ryjA ← | novel sRNA, function unknown |
| RA | 4,277,941 | C→T | 7.6% | noncoding (126/140 nt) | ryjA ← | novel sRNA, function unknown |
| RA | 4,277,942 | A→T | 7.9% | noncoding (125/140 nt) | ryjA ← | novel sRNA, function unknown |
| RA | 4,277,943 | A→G | 7.6% | noncoding (124/140 nt) | ryjA ← | novel sRNA, function unknown |
| RA | 4,277,944 | G→T | 8.3% | noncoding (123/140 nt) | ryjA ← | novel sRNA, function unknown |
| RA | 4,280,219 | A→C | 6.3% | E80D (GAA→GAC) | yjcE → | putative cation/proton antiporter |
| RA | 4,280,224 | G→T | 6.3% | G82V (GGT→GTT) | yjcE → | putative cation/proton antiporter |
| RA | 4,281,677 | T→A | 6.4% | intergenic (+48/+106) | yjcE → / ← yjcF | putative cation/proton antiporter/pentapeptide repeats protein |
| RA | 4,281,678 | C→A | 6.4% | intergenic (+49/+105) | yjcE → / ← yjcF | putative cation/proton antiporter/pentapeptide repeats protein |
| RA | 4,281,679 | T→G | 6.9% | intergenic (+50/+104) | yjcE → / ← yjcF | putative cation/proton antiporter/pentapeptide repeats protein |
| RA | 4,281,680 | T→A | 6.9% | intergenic (+51/+103) | yjcE → / ← yjcF | putative cation/proton antiporter/pentapeptide repeats protein |
| RA | 4,283,230 | A→G | 5.4% | intergenic (‑155/+23) | yjcF ← / ← actP | pentapeptide repeats protein/acetate transporter |
| RA | 4,283,231 | G→T | 5.7% | intergenic (‑156/+22) | yjcF ← / ← actP | pentapeptide repeats protein/acetate transporter |
| RA | 4,283,232 | A→C | 5.7% | intergenic (‑157/+21) | yjcF ← / ← actP | pentapeptide repeats protein/acetate transporter |
| RA | 4,283,233 | C→T | 5.4% | intergenic (‑158/+20) | yjcF ← / ← actP | pentapeptide repeats protein/acetate transporter |
| RA | 4,291,512 | G→A | 6.6% | M1M (GTG→ATG) †‡ | nrfE → | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE |
| RA | 4,291,513 | T→C | 6.6% | M1A (GTG→GCG) †‡ | nrfE → | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE |
| RA | 4,296,060 | C→T | 40.0% | intergenic (+266/+376) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| RA | 4,296,380:1 | +CG | 100% | intergenic (+586/+56) | gltP → / ← yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| RA | 4,299,542 | C→T | 8.0% | intergenic (‑176/+22) | fdhF ← / ← mdtP | formate dehydrogenase‑H, selenopolypeptide subunit/outer membrane factor of efflux pump |
| RA | 4,299,543 | A→G | 8.0% | intergenic (‑177/+21) | fdhF ← / ← mdtP | formate dehydrogenase‑H, selenopolypeptide subunit/outer membrane factor of efflux pump |
| RA | 4,299,546 | C→T | 8.1% | intergenic (‑180/+18) | fdhF ← / ← mdtP | formate dehydrogenase‑H, selenopolypeptide subunit/outer membrane factor of efflux pump |
| RA | 4,299,547 | A→G | 7.9% | intergenic (‑181/+17) | fdhF ← / ← mdtP | formate dehydrogenase‑H, selenopolypeptide subunit/outer membrane factor of efflux pump |
| RA | 4,303,984 | A→C | 6.6% | A42A (GCT→GCG) | mdtN ← | membrane fusion protein of efflux pump |
| RA | 4,307,294 | A→T | 9.2% | L169Q (CTG→CAG) | alsK ← | D‑allose kinase |
| RA | 4,307,298 | G→A | 9.7% | P168S (CCC→TCC) | alsK ← | D‑allose kinase |
| RA | 4,313,088 | G→T | 5.0% | intergenic (‑97/‑262) | alsR ← / → rpiB | d‑allose‑inducible als operon transcriptional repressor; autorepressor; repressor of rpiR/ribose 5‑phosphate isomerase B/allose 6‑phosphate isomerase |
| RA | 4,315,437 | A→T | 5.7% | F34L (TTT→TTA) ‡ | phnO ← | aminoalkylphosphonate N‑acetyltransferase |
| RA | 4,315,438 | A→T | 7.7% | F34Y (TTT→TAT) ‡ | phnO ← | aminoalkylphosphonate N‑acetyltransferase |
| RA | 4,315,439 | A→T | 6.9% | F34I (TTT→ATT) ‡ | phnO ← | aminoalkylphosphonate N‑acetyltransferase |
| RA | 4,326,892 | A→T | 5.0% | intergenic (‑158/‑243) | yjdM ← / → crfC | zinc‑ribbon family protein/clamp‑binding sister replication fork colocalization protein, dynamin‑related |
| RA | 4,332,529 | C→G | 5.6% | Q248H (CAG→CAC) ‡ | basS ← | sensory histidine kinase in two‑component regulatory system with BasR |
| RA | 4,332,531 | G→T | 6.0% | Q248K (CAG→AAG) ‡ | basS ← | sensory histidine kinase in two‑component regulatory system with BasR |
| RA | 4,332,532 | A→C | 5.5% | V247V (GTT→GTG) ‡ | basS ← | sensory histidine kinase in two‑component regulatory system with BasR |
| RA | 4,332,534 | C→G | 5.5% | V247L (GTT→CTT) ‡ | basS ← | sensory histidine kinase in two‑component regulatory system with BasR |
| RA | 4,332,868 | G→T | 7.4% | R135R (CGC→CGA) | basS ← | sensory histidine kinase in two‑component regulatory system with BasR |
| RA | 4,332,871 | A→C | 9.9% | S134R (AGT→AGG) | basS ← | sensory histidine kinase in two‑component regulatory system with BasR |
| RA | 4,335,654 | T→A | 6.1% | intergenic (‑64/+40) | eptA ← / ← adiC | lipid A phosphoethanolamine transferase/arginine:agmatine antiporter |
| RA | 4,335,655 | T→A | 6.0% | intergenic (‑65/+39) | eptA ← / ← adiC | lipid A phosphoethanolamine transferase/arginine:agmatine antiporter |
| RA | 4,336,974 | A→T | 6.3% | S20T (TCG→ACG) | adiC ← | arginine:agmatine antiporter |
| RA | 4,336,979 | A→C | 6.4% | M18R (ATG→AGG) | adiC ← | arginine:agmatine antiporter |
| RA | 4,336,981 | C→G | 6.7% | L17L (CTG→CTC) ‡ | adiC ← | arginine:agmatine antiporter |
| RA | 4,336,983 | G→T | 6.0% | L17M (CTG→ATG) ‡ | adiC ← | arginine:agmatine antiporter |
| RA | 4,336,988 | A→T | 6.7% | V15D (GTC→GAC) | adiC ← | arginine:agmatine antiporter |
| RA | 4,347,285 | C→G | 5.4% | M14I (ATG→ATC) | fumB ← | anaerobic class I fumarate hydratase (fumarase B) |
| RA | 4,353,170 | G→A | 6.4% | intergenic (+89/+30) | ghoT → / ← lysU | toxin of GhoTS toxin‑antitoxin pair; membrane‑lytic protein; stimulator of persister cell formation/lysine tRNA synthetase, inducible |
| RA | 4,353,171 | C→G | 6.3% | intergenic (+90/+29) | ghoT → / ← lysU | toxin of GhoTS toxin‑antitoxin pair; membrane‑lytic protein; stimulator of persister cell formation/lysine tRNA synthetase, inducible |
| RA | 4,353,172 | C→G | 6.4% | intergenic (+91/+28) | ghoT → / ← lysU | toxin of GhoTS toxin‑antitoxin pair; membrane‑lytic protein; stimulator of persister cell formation/lysine tRNA synthetase, inducible |
| RA | 4,353,173 | T→C | 6.3% | intergenic (+92/+27) | ghoT → / ← lysU | toxin of GhoTS toxin‑antitoxin pair; membrane‑lytic protein; stimulator of persister cell formation/lysine tRNA synthetase, inducible |
| RA | 4,356,445 | A→T | 10.3% | intergenic (‑34/+25) | dtpC ← / ← cadA | dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible |
| RA | 4,356,446 | A→T | 10.5% | intergenic (‑35/+24) | dtpC ← / ← cadA | dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible |
| RA | 4,366,854 | T→G | 10.1% | intergenic (‑81/+37) | dcuA ← / ← aspA | C4‑dicarboxylate antiporter/aspartate ammonia‑lyase |
| RA | 4,366,855 | C→A | 9.9% | intergenic (‑82/+36) | dcuA ← / ← aspA | C4‑dicarboxylate antiporter/aspartate ammonia‑lyase |
| RA | 4,376,280 | G→A | 5.2% | intergenic (+15/‑37) | efp → / → ecnA | polyproline‑specific translation elongation factor EF‑P/entericidin A membrane lipoprotein, antidote entericidin B |
| RA | 4,376,822 | A→T | 5.1% | intergenic (+123/‑53) | ecnB → / → sugE | entericidin B membrane lipoprotein/multidrug efflux system protein |
| RA | 4,378,857 | G→A | 8.3% | R30C (CGC→TGC) | ampC ← | penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| RA | 4,378,858 | A→T | 9.0% | H29Q (CAT→CAA) ‡ | ampC ← | penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| RA | 4,378,859 | T→C | 8.6% | H29R (CAT→CGT) ‡ | ampC ← | penicillin‑binding protein; beta‑lactamase, intrinsically weak |
| RA | 4,378,976 | A→T | 6.3% | intergenic (‑32/+31) | ampC ← / ← frdD | penicillin‑binding protein; beta‑lactamase, intrinsically weak/fumarate reductase (anaerobic), membrane anchor subunit |
| RA | 4,378,977 | T→A | 6.2% | intergenic (‑33/+30) | ampC ← / ← frdD | penicillin‑binding protein; beta‑lactamase, intrinsically weak/fumarate reductase (anaerobic), membrane anchor subunit |
| RA | 4,378,978 | A→T | 7.0% | intergenic (‑34/+29) | ampC ← / ← frdD | penicillin‑binding protein; beta‑lactamase, intrinsically weak/fumarate reductase (anaerobic), membrane anchor subunit |
| RA | 4,392,757 | C→G | 5.2% | intergenic (+99/‑135) | glyY → / → yjeV | tRNA‑Gly/uncharacterized protein |
| RA | 4,401,064 | T→G | 5.7% | H131Q (CAT→CAG) | hflX → | GTPase, stimulated by 50S subunit binding; Mn(2+) homeostasis regulator |
| RA | 4,406,129 | T→C | 100% | intergenic (+144/‑61) | purA → / → nsrR | adenylosuccinate synthetase/nitric oxide‑sensitive repressor for NO regulon |
| RA | 4,410,034 | G→A | 5.3% | intergenic (+28/‑99) | rlmB → / → yjfI | 23S rRNA mG2251 2'‑O‑ribose methyltransferase, SAM‑dependent/DUF2170 family protein |
| RA | 4,410,037 | T→C | 5.4% | intergenic (+31/‑96) | rlmB → / → yjfI | 23S rRNA mG2251 2'‑O‑ribose methyltransferase, SAM‑dependent/DUF2170 family protein |
| RA | 4,422,992 | C→G | 5.5% | R49R (CGC→CGG) | ulaE → | L‑xylulose 5‑phosphate 3‑epimerase |
| RA | 4,422,998 | C→G | 5.2% | N51K (AAC→AAG) | ulaE → | L‑xylulose 5‑phosphate 3‑epimerase |
| RA | 4,423,000 | G→T | 5.4% | W52L (TGG→TTG) | ulaE → | L‑xylulose 5‑phosphate 3‑epimerase |
| RA | 4,423,004 | C→G | 5.5% | S53R (AGC→AGG) | ulaE → | L‑xylulose 5‑phosphate 3‑epimerase |
| RA | 4,429,120 | Δ1 bp | 6.0% | coding (186/621 nt) | fklB → | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| RA | 4,429,125 | A→G | 5.8% | E64G (GAA→GGA) | fklB → | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| RA | 4,429,127 | A→T | 5.8% | I65F (ATC→TTC) ‡ | fklB → | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| RA | 4,429,129 | C→T | 5.8% | I65I (ATC→ATT) ‡ | fklB → | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| RA | 4,429,133:1 | +C | 5.8% | coding (199/621 nt) | fklB → | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| RA | 4,439,845 | T→A | 7.8% | intergenic (+52/+27) | ytfK → / ← ytfL | DUF1107 family protein/UPF0053 family inner membrane protein |
| RA | 4,450,956 | A→C | 5.6% | intergenic (+38/‑102) | ytfQ → / → ytfR | galactofuranose ABC transporter periplasmic binding protein/putative sugar ABC transporter ATPase |
| RA | 4,450,962 | T→G | 6.7% | intergenic (+44/‑96) | ytfQ → / → ytfR | galactofuranose ABC transporter periplasmic binding protein/putative sugar ABC transporter ATPase |
| RA | 4,455,422 | T→A | 5.3% | Q63L (CAG→CTG) | fbp ← | fructose‑1,6‑bisphosphatase I |
| RA | 4,460,477 | A→C | 5.3% | intergenic (‑113/+45) | nrdG ← / ← nrdD | anaerobic ribonucleotide reductase activating protein/anaerobic ribonucleoside‑triphosphate reductase |
| RA | 4,460,483 | T→A | 6.0% | intergenic (‑119/+39) | nrdG ← / ← nrdD | anaerobic ribonucleotide reductase activating protein/anaerobic ribonucleoside‑triphosphate reductase |
| RA | 4,460,484 | T→A | 5.6% | intergenic (‑120/+38) | nrdG ← / ← nrdD | anaerobic ribonucleotide reductase activating protein/anaerobic ribonucleoside‑triphosphate reductase |
| RA | 4,469,455 | A→G | 8.1% | T611A (ACC→GCC) ‡ | mgtA → | magnesium transporter |
| RA | 4,469,456 | C→G | 8.0% | T611S (ACC→AGC) ‡ | mgtA → | magnesium transporter |
| RA | 4,469,457 | C→T | 8.1% | T611T (ACC→ACT) ‡ | mgtA → | magnesium transporter |
| RA | 4,470,951 | A→C | 8.1% | intergenic (‑38/+35) | ridA ← / ← pyrI | enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit |
| RA | 4,470,952 | T→C | 8.2% | intergenic (‑39/+34) | ridA ← / ← pyrI | enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit |
| RA | 4,470,957 | G→A | 7.7% | intergenic (‑44/+29) | ridA ← / ← pyrI | enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit |
| RA | 4,470,958 | G→T | 7.5% | intergenic (‑45/+28) | ridA ← / ← pyrI | enamine/imine deaminase, reaction intermediate detoxification/aspartate carbamoyltransferase, regulatory subunit |
| RA | 4,472,434 | G→A | 7.2% | R34* (CGA→TGA) | pyrL ← | pyrBI operon leader peptide |
| RA | 4,472,437 | T→C | 7.1% | N33D (AAT→GAT) | pyrL ← | pyrBI operon leader peptide |
| RA | 4,479,012 | A→T | 5.9% | intergenic (+123/+22) | rraB → / ← yjgM | protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase |
| RA | 4,479,016 | G→C | 5.9% | intergenic (+127/+18) | rraB → / ← yjgM | protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase |
| RA | 4,479,020 | A→T | 5.8% | intergenic (+131/+14) | rraB → / ← yjgM | protein inhibitor of RNase E/GNAT family putative N‑acetyltransferase |
| RA | 4,488,424 | G→T | 7.8% | intergenic (+24/+137) | lptG → / ← yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold |
| RA | 4,488,425 | A→T | 7.3% | intergenic (+25/+136) | lptG → / ← yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold |
| RA | 4,488,426 | A→T | 8.3% | intergenic (+26/+135) | lptG → / ← yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold |
| RA | 4,488,427 | A→C | 7.8% | intergenic (+27/+134) | lptG → / ← yjgR | lipopolysaccharide export ABC permease/DUF853 family protein with NTPase fold |
| RA | 4,502,105 | A→G | 5.8% | *443Q (TAA→CAA) | insG ← | IS4 transposase |
| RA | 4,502,106 | A→C | 5.6% | A442A (GCT→GCG) ‡ | insG ← | IS4 transposase |
| RA | 4,502,107 | G→T | 5.6% | A442D (GCT→GAT) ‡ | insG ← | IS4 transposase |
| RA | 4,502,108 | C→T | 5.6% | A442T (GCT→ACT) ‡ | insG ← | IS4 transposase |
| RA | 4,514,335 | A→T | 5.7% | intergenic (‑27/+18) | fecB ← / ← fecA | ferric citrate ABC transporter periplasmic binding protein/TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein |
| RA | 4,514,336 | A→T | 5.4% | intergenic (‑28/+17) | fecB ← / ← fecA | ferric citrate ABC transporter periplasmic binding protein/TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein |
| RA | 4,515,330 | C→A | 5.7% | E450* (GAA→TAA) | fecA ← | TonB‑dependent outer membrane ferric citrate transporter and signal transducer; ferric citrate extracelluar receptor; FecR‑interacting protein |
| RA | 4,519,313 | C→A | 5.1% | intergenic (+89/+25) | insB1 → / ← yjhU | IS1 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related/putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element |
| RA | 4,520,500 | Δ1 bp | 7.7% | intergenic (‑176/+171) | yjhU ← / ← yjhF | putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter |
| RA | 4,520,504:1 | +T | 7.1% | intergenic (‑180/+167) | yjhU ← / ← yjhF | putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element/putative transporter |
| RA | 4,523,472 | A→C | 7.0% | F208C (TTC→TGC) | yjhG ← | putative dehydratase |
| RA | 4,531,122 | T→G | 9.5% | K177T (AAA→ACA) | sgcX ← | putative endoglucanase with Zn‑dependent exopeptidase domain |
| RA | 4,537,639 | T→G | 5.7% | intergenic (‑45/+20) | nanS ← / ← nanM | 9‑O‑acetyl N‑acetylneuraminic acid esterase/N‑acetylneuraminic acid mutarotase |
| RA | 4,537,640 | T→G | 5.5% | intergenic (‑46/+19) | nanS ← / ← nanM | 9‑O‑acetyl N‑acetylneuraminic acid esterase/N‑acetylneuraminic acid mutarotase |
| RA | 4,537,643 | C→A | 5.2% | intergenic (‑49/+16) | nanS ← / ← nanM | 9‑O‑acetyl N‑acetylneuraminic acid esterase/N‑acetylneuraminic acid mutarotase |
| RA | 4,537,644 | C→A | 5.5% | intergenic (‑50/+15) | nanS ← / ← nanM | 9‑O‑acetyl N‑acetylneuraminic acid esterase/N‑acetylneuraminic acid mutarotase |
| RA | 4,549,873 | A→C | 6.5% | intergenic (+163/+80) | fimH → / ← gntP | minor component of type 1 fimbriae/fructuronate transporter |
| RA | 4,549,932 | T→A | 5.4% | intergenic (+222/+21) | fimH → / ← gntP | minor component of type 1 fimbriae/fructuronate transporter |
| RA | 4,551,422 | T→A | 8.5% | intergenic (‑126/‑214) | gntP ← / → uxuA | fructuronate transporter/mannonate hydrolase |
| RA | 4,554,523 | T→G | 7.6% | intergenic (+162/‑53) | uxuB → / → uxuR | D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor |
| RA | 4,554,524 | C→A | 7.6% | intergenic (+163/‑52) | uxuB → / → uxuR | D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor |
| RA | 4,554,530 | G→T | 7.8% | intergenic (+169/‑46) | uxuB → / → uxuR | D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor |
| RA | 4,554,531 | C→T | 7.8% | intergenic (+170/‑45) | uxuB → / → uxuR | D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor |
| RA | 4,566,646 | T→A | 5.2% | K201* (AAA→TAA) | yjiN ← | zinc‑type alcohol dehydrogenase‑like protein |
| RA | 4,612,329 | A→G | 7.8% | intergenic (+40/‑82) | ytjA → / → yjjU | uncharacterized protein/putative patatin‑like family phospholipase |
| RA | 4,612,330 | G→C | 7.8% | intergenic (+41/‑81) | ytjA → / → yjjU | uncharacterized protein/putative patatin‑like family phospholipase |
| RA | 4,612,331 | C→T | 7.8% | intergenic (+42/‑80) | ytjA → / → yjjU | uncharacterized protein/putative patatin‑like family phospholipase |
| RA | 4,627,828 | C→A | 8.6% | P172T (CCG→ACG) | nadR → | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor |
| RA | 4,628,751 | C→T | 5.0% | intergenic (+204/+104) | nadR → / ← ettA | trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor/energy‑dependent translational throttle A |
| JC JC | 4,640,551 | IS1 (–) +9 bp | 100% | intergenic (+9/‑383) | yjjY → / → yjtD | uncharacterized protein/putative methyltransferase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 772984 | 774222 | 1239 | 45 [44] | [42] 45 | [cydA]–[cydX] | [cydA],cydB,[cydX] |
| * | * | ÷ | NC_000913 | 1037695 | 1039339 | 1645 | 45 [43] | [44] 48 | cbdA–[cbdB] | cbdA,[cbdB] |
| * | * | ÷ | NC_000913 | 2403919 | 2404683 | 765 | 45 [43] | [41] 45 | nuoB–[nuoA] | nuoB,[nuoA] |
| * | * | ÷ | NC_000913 | 3423736–3424234 | 3424569–3424239 | 6–834 | 46 [44] | [44] 45 | [rrfD]–[rrlD] | [rrfD],[rrlD] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 15560 = | NA (NA) | 5 (0.050) | 5/272 | NT | NA | noncoding (174/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | 15659 = | NA (NA) | noncoding (273/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 15574 | NA (NA) | 4 (0.040) | 4/272 | NT | NA | noncoding (188/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 15651 | NA (NA) | noncoding (265/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 16653 | NA (NA) | 7 (0.070) | 6/264 | NT | NA | noncoding (1267/1345 nt) | IS186 | repeat region |
| ? | NC_000913 | = 16691 | NA (NA) | noncoding (1305/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | 103901 = | 114 (1.150) | 7 (0.070) | 7/266 | NT | 6.2% | coding (747/831 nt) | ftsQ | divisome assembly protein, membrane anchored protein involved in growth of wall at septum |
| ? | NC_000913 | 103941 = | 104 (1.100) | coding (787/831 nt) | ftsQ | divisome assembly protein, membrane anchored protein involved in growth of wall at septum | |||||
| * | ? | NC_000913 | 198033 = | 93 (0.940) | 6 (0.060) | 6/260 | NT | 6.5% | coding (106/2433 nt) | bamA | BamABCDE complex OM biogenesis outer membrane pore‑forming assembly factor |
| ? | NC_000913 | 198087 = | 87 (0.940) | coding (160/2433 nt) | bamA | BamABCDE complex OM biogenesis outer membrane pore‑forming assembly factor | |||||
| * | ? | NC_000913 | 213083 = | 88 (0.890) | 5 (0.050) | 4/270 | NT | 5.4% | coding (753/1299 nt) | tilS | tRNA(Ile)‑lysidine synthetase |
| ? | NC_000913 | 213120 = | 89 (0.930) | coding (790/1299 nt) | tilS | tRNA(Ile)‑lysidine synthetase | |||||
| * | ? | NC_000913 | = 224374 | NA (NA) | 5 (0.050) | 5/264 | NT | NA | noncoding (604/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | = 224403 | NA (NA) | noncoding (633/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | 224910 = | NA (NA) | 3 (0.030) | 3/262 | NT | NA | noncoding (1140/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon |
| ? | NC_000913 | 225157 = | NA (NA) | noncoding (1387/1542 nt) | rrsH | 16S ribosomal RNA of rrnH operon | |||||
| * | ? | NC_000913 | = 243684 | 98 (0.990) | 6 (0.070) | 4/258 | NT | 6.3% | coding (142/579 nt) | gmhA | D‑sedoheptulose 7‑phosphate isomerase |
| ? | NC_000913 | = 243721 | 89 (0.970) | coding (179/579 nt) | gmhA | D‑sedoheptulose 7‑phosphate isomerase | |||||
| * | ? | NC_000913 | 273987 = | NA (NA) | 3 (0.030) | 3/266 | NT | NA | noncoding (1163/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274057 = | NA (NA) | noncoding (1093/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274038 = | NA (NA) | 6 (0.060) | 6/266 | NT | NA | noncoding (1112/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274083 = | NA (NA) | noncoding (1067/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274347 = | NA (NA) | 7 (0.070) | 5/264 | NT | NA | noncoding (803/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274410 = | NA (NA) | noncoding (740/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274353 | NA (NA) | 4 (0.040) | 4/264 | NT | NA | noncoding (797/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274402 | NA (NA) | noncoding (748/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274476 | NA (NA) | 3 (0.030) | 3/264 | NT | NA | noncoding (674/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274636 | NA (NA) | noncoding (514/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274514 = | NA (NA) | 8 (0.080) | 8/270 | NT | NA | noncoding (636/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274570 = | NA (NA) | noncoding (580/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274620 = | NA (NA) | 11 (0.120) | 8/260 | NT | NA | noncoding (530/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274663 = | NA (NA) | noncoding (487/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274633 | NA (NA) | 4 (0.040) | 3/268 | NT | NA | noncoding (517/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274697 | NA (NA) | noncoding (453/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274681 | NA (NA) | 3 (0.030) | 3/262 | NT | NA | noncoding (469/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274762 | NA (NA) | noncoding (388/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 274692 = | NA (NA) | 8 (0.080) | 6/270 | NT | NA | noncoding (458/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 274732 = | NA (NA) | noncoding (418/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 274695 | NA (NA) | 4 (0.040) | 4/270 | NT | NA | noncoding (455/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 274727 | NA (NA) | noncoding (423/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 315690 = | NA (NA) | 4 (0.040) | 4/266 | NT | NA | noncoding (462/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 315726 = | NA (NA) | noncoding (498/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | 316193 = | NA (NA) | 4 (0.040) | 4/260 | NT | NA | noncoding (965/1255 nt) | IS3 | repeat region |
| ? | NC_000913 | 316230 = | NA (NA) | noncoding (1002/1255 nt) | IS3 | repeat region | |||||
| * | ? | NC_000913 | = 362458 | 81 (0.820) | 4 (0.040) | 3/264 | NT | 5.8% | coding (722/1254 nt) | lacY | lactose permease |
| ? | NC_000913 | = 362529 | 54 (0.570) | coding (651/1254 nt) | lacY | lactose permease | |||||
| * | ? | NC_000913 | = 381494 | NA (NA) | 5 (0.050) | 4/268 | NT | NA | noncoding (235/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381540 | NA (NA) | noncoding (281/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 381661 = | NA (NA) | 5 (0.050) | 4/270 | NT | NA | noncoding (402/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 381764 = | NA (NA) | noncoding (505/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 381669 | NA (NA) | 8 (0.090) | 6/264 | NT | NA | noncoding (410/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | = 381695 | NA (NA) | noncoding (436/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 401812 | 82 (0.830) | 5 (0.050) | 4/264 | NT | 6.1% | coding (66/1416 nt) | phoA | bacterial alkaline phosphatase |
| ? | NC_000913 | = 401838 | 75 (0.800) | coding (92/1416 nt) | phoA | bacterial alkaline phosphatase | |||||
| * | ? | NC_000913 | 412077 = | 101 (1.020) | 6 (0.060) | 6/262 | NT | 6.0% | coding (405/1185 nt) | araJ | L‑arabinose‑inducible putative transporter, MFS family |
| ? | NC_000913 | 412119 = | 93 (1.000) | coding (363/1185 nt) | araJ | L‑arabinose‑inducible putative transporter, MFS family | |||||
| * | ? | NC_000913 | 416958 = | 103 (1.040) | 5 (0.050) | 4/270 | NT | 5.2% | intergenic (‑6/‑184) | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR |
| ? | NC_000913 | 417031 = | 84 (0.870) | intergenic (‑79/‑111) | sbcD/phoB | exonuclease, dsDNA, ATP‑dependent/response regulator in two‑component regulatory system with PhoR | |||||
| * | ? | NC_000913 | = 435568 | 100 (1.010) | 6 (0.060) | 5/264 | NT | 5.8% | intergenic (+12/‑66) | nusB/thiL | transcription antitermination protein/thiamine monophosphate kinase |
| ? | NC_000913 | = 435597 | 101 (1.070) | intergenic (+41/‑37) | nusB/thiL | transcription antitermination protein/thiamine monophosphate kinase | |||||
| * | ? | NC_000913 | = 514543 | 72 (0.730) | 4 (0.040) | 3/264 | NT | 5.1% | coding (317/459 nt) | ybbJ | inner membrane protein; stimulator of the QmcA suppressor of ftsH‑htpX |
| ? | NC_000913 | = 514584 | 80 (0.850) | coding (276/459 nt) | ybbJ | inner membrane protein; stimulator of the QmcA suppressor of ftsH‑htpX | |||||
| * | ? | NC_000913 | 569149 = | 156 (1.580) | 8 (0.090) | 7/256 | NT | 5.3% | coding (248/1527 nt) | ybcK | DLP12 prophage; putative recombinase |
| ? | NC_000913 | 569173 = | 143 (1.570) | coding (272/1527 nt) | ybcK | DLP12 prophage; putative recombinase | |||||
| * | ? | NC_000913 | 611463 = | 95 (0.960) | 6 (0.060) | 4/264 | NT | 6.6% | coding (1032/2241 nt) | fepA | ferrienterobactin outer membrane transporter |
| ? | NC_000913 | 611574 = | 80 (0.850) | coding (921/2241 nt) | fepA | ferrienterobactin outer membrane transporter | |||||
| * | ? | NC_000913 | 621679 = | 77 (0.780) | 4 (0.040) | 3/268 | NT | 5.1% | coding (511/1005 nt) | fepD | ferrienterobactin ABC transporter permease |
| ? | NC_000913 | 621729 = | 75 (0.790) | coding (461/1005 nt) | fepD | ferrienterobactin ABC transporter permease | |||||
| * | ? | NC_000913 | 624176 = | 82 (0.830) | 4 (0.040) | 3/260 | NT | 5.3% | coding (335/957 nt) | fepB | ferrienterobactin ABC transporter periplasmic binding protein |
| ? | NC_000913 | 624218 = | 67 (0.720) | coding (293/957 nt) | fepB | ferrienterobactin ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 716906 = | 101 (1.020) | 8 (0.090) | 8/258 | NT | 7.8% | intergenic (‑36/+40) | ybfI/potE | pseudogene/putrescine/proton symporter: putrescine/ornithine antiporter |
| ? | NC_000913 | 716932 = | 95 (1.030) | intergenic (‑62/+14) | ybfI/potE | pseudogene/putrescine/proton symporter: putrescine/ornithine antiporter | |||||
| * | ? | NC_000913 | = 738860 | 121 (1.220) | 5 (0.070) +40 bp |
3/198 | NT | 6.2% | intergenic (+7/‑141) | ybfD/ybgA | H repeat‑associated putative transposase/DUF1722 family protein |
| ? | NC_000913 | = 1532679 | 93 (0.940) | coding (864/1137 nt) | ydcC | H repeat‑associated putative transposase | |||||
| * | ? | NC_000913 | 781369 = | 78 (0.790) | 15 (0.150) +GAG |
11/272 | NT | 21.6% | noncoding (1/76 nt) | lysZ | tRNA‑Lys |
| ? | NC_000913 | = 2521006 | 33 (0.330) | noncoding (76/76 nt) | valU | tRNA‑Val | |||||
| * | ? | NC_000913 | 909443 = | 61 (0.620) | 3 (0.030) | 3/266 | NT | 5.1% | coding (1607/1719 nt) | poxB | pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding |
| ? | NC_000913 | 909485 = | 53 (0.560) | coding (1565/1719 nt) | poxB | pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding | |||||
| * | ? | NC_000913 | = 919352 | 94 (0.950) | 5 (0.050) | 4/266 | NT | 5.6% | coding (118/1116 nt) | macA | macrolide transporter membrane fusion protein (MFP) component |
| ? | NC_000913 | = 919436 | 79 (0.830) | coding (202/1116 nt) | macA | macrolide transporter membrane fusion protein (MFP) component | |||||
| * | ? | NC_000913 | 946720 = | 77 (0.780) | 4 (0.040) | 4/266 | NT | 5.2% | coding (850/1149 nt) | ycaD | putative MFS transporter, inner membrane protein |
| ? | NC_000913 | 946769 = | 73 (0.770) | coding (899/1149 nt) | ycaD | putative MFS transporter, inner membrane protein | |||||
| * | ? | NC_000913 | 1118068 = | 109 (1.100) | 5 (0.050) | 4/260 | NT | 5.1% | coding (409/576 nt) | yceI | periplasmic high pH‑inducible lipid‑binding protein |
| ? | NC_000913 | 1118149 = | 86 (0.930) | coding (328/576 nt) | yceI | periplasmic high pH‑inducible lipid‑binding protein | |||||
| * | ? | NC_000913 | 1121263 = | 111 (1.120) | 6 (0.060) | 4/274 | NT | 5.6% | coding (225/246 nt) | dinI | DNA damage‑inducible protein I |
| ? | NC_000913 | 1121332 = | 94 (0.960) | coding (156/246 nt) | dinI | DNA damage‑inducible protein I | |||||
| * | ? | NC_000913 | 1156591 = | 86 (0.870) | 4 (0.040) | 3/262 | NT | 5.0% | coding (830/1005 nt) | holB | DNA polymerase III, delta prime subunit |
| ? | NC_000913 | 1156646 = | 70 (0.750) | coding (885/1005 nt) | holB | DNA polymerase III, delta prime subunit | |||||
| * | ? | NC_000913 | = 1186372 | 89 (0.900) | 5 (0.050) | 4/268 | NT | 5.6% | coding (529/1227 nt) | pepT | peptidase T |
| ? | NC_000913 | = 1186406 | 84 (0.880) | coding (563/1227 nt) | pepT | peptidase T | |||||
| * | ? | NC_000913 | 1207790 = | 25 (0.250) | 33 (0.380) | 31/246 | NT | 48.9% | coding (290/630 nt) | stfP | e14 prophage; uncharacterized protein |
| ? | NC_000913 | 1209619 = | 47 (0.540) | pseudogene (1/501 nt) | stfE | pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related | |||||
| * | ? | NC_000913 | = 1207805 | 27 (0.270) | 30 (0.340) | 28/246 | NT | 45.8% | coding (305/630 nt) | stfP | e14 prophage; uncharacterized protein |
| ? | NC_000913 | = 1209602 | 47 (0.540) | pseudogene (18/501 nt) | stfE | pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related | |||||
| * | ? | NC_000913 | = 1232761 | 88 (0.890) | 5 (0.050) | 5/264 | NT | 5.5% | coding (270/531 nt) | dsbB | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I |
| ? | NC_000913 | = 1232774 | 87 (0.930) | coding (257/531 nt) | dsbB | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I | |||||
| * | ? | NC_000913 | = 1258687 | 92 (0.930) | 5 (0.050) | 4/260 | NT | 5.3% | intergenic (‑174/‑104) | pth/ychH | peptidyl‑tRNA hydrolase/DUF2583 family putative inner membrane protein |
| ? | NC_000913 | = 1258760 | 92 (0.990) | intergenic (‑247/‑31) | pth/ychH | peptidyl‑tRNA hydrolase/DUF2583 family putative inner membrane protein | |||||
| * | ? | NC_000913 | = 1275864 | 85 (0.860) | 5 (0.050) | 4/272 | NT | 5.4% | coding (1755/1797 nt) | narX | sensory histidine kinase in two‑component regulatory system with NarL |
| ? | NC_000913 | = 1275903 | 91 (0.940) | coding (1716/1797 nt) | narX | sensory histidine kinase in two‑component regulatory system with NarL | |||||
| * | ? | NC_000913 | = 1297427 | 98 (0.990) | 5 (0.050) | 5/270 | NT | 5.2% | coding (695/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase |
| ? | NC_000913 | = 1297454 | 87 (0.910) | coding (668/2676 nt) | adhE | fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase | |||||
| * | ? | NC_000913 | = 1299498 | 0 (0.000) | 131 (1.360) | 98/270 | NT | 100% | intergenic (+253/‑1684) | ychE/oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1300698 = | 0 (0.000) | intergenic (+1453/‑484) | ychE/oppA | UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 1326713 | 69 (0.700) | 5 (0.050) | 4/266 | NT | 6.7% | intergenic (+72/‑139) | yciQ/rluB | enhancer of membrane protein expression; putative inner membrane protein/23S rRNA pseudouridine(2605) synthase |
| ? | NC_000913 | = 1326738 | 73 (0.770) | intergenic (+97/‑114) | yciQ/rluB | enhancer of membrane protein expression; putative inner membrane protein/23S rRNA pseudouridine(2605) synthase | |||||
| * | ? | NC_000913 | 1396537 = | NA (NA) | 11 (0.120) | 6/266 | NT | 11.0% | noncoding (494/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 1428270 | 93 (0.940) | noncoding (525/1196 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 1406549 = | 80 (0.810) | 6 (0.060) | 6/266 | NT | 7.7% | intergenic (+7/+14) | smrA/ydaM | DNA endonuclease/diguanylate cyclase, csgD regulator |
| ? | NC_000913 | 1406589 = | 68 (0.720) | coding (1207/1233 nt) | ydaM | diguanylate cyclase, csgD regulator | |||||
| * | ? | NC_000913 | 1465092 = | 134 (1.350) | 7 (0.080) | 7/256 | NT | 5.8% | intergenic (+31/+73) | paaY/ynbG | thioesterase required for phenylacetic acid degradation; trimeric; phenylacetate regulatory and detoxification protein; hexapeptide repeat protein/uncharacterized protein |
| ? | NC_000913 | 1465125 = | 105 (1.150) | intergenic (+64/+40) | paaY/ynbG | thioesterase required for phenylacetic acid degradation; trimeric; phenylacetate regulatory and detoxification protein; hexapeptide repeat protein/uncharacterized protein | |||||
| * | ? | NC_000913 | 1512410 = | 107 (1.080) | 6 (0.060) | 4/270 | NT | 5.8% | coding (757/1146 nt) | ydcS | putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | 1512451 = | 91 (0.950) | coding (798/1146 nt) | ydcS | putative ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | 1522464 = | 59 (0.600) | 3 (0.030) | 3/264 | NT | 5.2% | coding (602/2103 nt) | yncD | putative iron outer membrane transporter |
| ? | NC_000913 | 1522504 = | 54 (0.570) | coding (562/2103 nt) | yncD | putative iron outer membrane transporter | |||||
| * | ? | NC_000913 | 1571692 = | 21 (0.210) | 3 (0.030) | 3/266 | NT | 23.0% | coding (354/1401 nt) | gadB | glutamate decarboxylase B, PLP‑dependent |
| ? | NC_000913 | 3667198 = | 0 (0.000) | coding (383/1401 nt) | gadA | glutamate decarboxylase A, PLP‑dependent | |||||
| * | ? | NC_000913 | = 1690789 | 89 (0.900) | 5 (0.050) | 4/264 | NT | 5.6% | coding (938/1509 nt) | ydgA | DUF945 family protein |
| ? | NC_000913 | = 1690812 | 85 (0.900) | coding (961/1509 nt) | ydgA | DUF945 family protein | |||||
| * | ? | NC_000913 | 1696691 = | 61 (0.620) | 3 (0.030) | 3/264 | NT | 5.4% | coding (362/591 nt) | uidR | transcriptional repressor |
| ? | NC_000913 | 1696729 = | 48 (0.510) | coding (324/591 nt) | uidR | transcriptional repressor | |||||
| * | ? | NC_000913 | 1816169 = | NA (NA) | 3 (0.040) +22 bp |
3/234 | NT | NA | intergenic (+41/+217) | katE/chbG | catalase HPII, heme d‑containing/chito‑oligosaccharide deacetylase |
| ? | NC_000913 | = 3676286 | NA (NA) | intergenic (+178/+4) | yhjE/yhjG | putative MFS transporter; membrane protein/putative inner membrane‑anchored periplasmic AsmA family protein | |||||
| * | ? | NC_000913 | = 1859585 | 81 (0.820) | 5 (0.050) | 4/264 | NT | 5.7% | coding (645/1380 nt) | ydjK | putative MFS sugar transporter, membrane protein |
| ? | NC_000913 | = 1859618 | 89 (0.950) | coding (612/1380 nt) | ydjK | putative MFS sugar transporter, membrane protein | |||||
| * | ? | NC_000913 | 1945670 = | 79 (0.800) | 5 (0.050) | 4/264 | NT | 6.0% | coding (307/612 nt) | ruvA | component of RuvABC resolvasome, regulatory subunit |
| ? | NC_000913 | 1945744 = | 81 (0.860) | coding (233/612 nt) | ruvA | component of RuvABC resolvasome, regulatory subunit | |||||
| * | ? | NC_000913 | = 2025056 | 76 (0.770) | 4 (0.040) | 4/268 | NT | 5.0% | coding (71/228 nt) | yodD | uncharacterized protein |
| ? | NC_000913 | = 2025094 | 78 (0.820) | coding (109/228 nt) | yodD | uncharacterized protein | |||||
| * | ? | NC_000913 | = 2032988 | 71 (0.720) | 5 (0.050) | 4/262 | NT | 6.8% | coding (92/696 nt) | yedJ | putative HD superfamily phosphohydrolase |
| ? | NC_000913 | = 2033008 | 71 (0.760) | coding (72/696 nt) | yedJ | putative HD superfamily phosphohydrolase | |||||
| * | ? | NC_000913 | = 2066867 | 2 (0.020) | 3 (0.030) | 3/278 | NT | 60.0% | noncoding (487/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | = 2102412 | NA (NA) | noncoding (532/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | 2077264 = | 66 (0.670) | 4 (0.040) | 4/264 | NT | 6.2% | coding (153/369 nt) | cbeA | CP4‑44 prophage; cytoskeleton bundling‑enhancing factor A; CbtA antitoxin |
| ? | NC_000913 | 2077308 = | 58 (0.620) | coding (197/369 nt) | cbeA | CP4‑44 prophage; cytoskeleton bundling‑enhancing factor A; CbtA antitoxin | |||||
| * | ? | NC_000913 | = 2405625 | 99 (1.000) | 6 (0.060) | 6/264 | NT | 5.8% | intergenic (‑553/+78) | nuoA/lrhA | NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes |
| ? | NC_000913 | = 2405660 | 100 (1.060) | intergenic (‑588/+43) | nuoA/lrhA | NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes | |||||
| * | ? | NC_000913 | 2530197 = | 113 (1.140) | 6 (0.060) | 6/262 | NT | 5.7% | intergenic (‑21/+50) | ligA/zipA | DNA ligase, NAD(+)‑dependent/FtsZ stabilizer |
| ? | NC_000913 | 2530218 = | 93 (1.000) | intergenic (‑42/+29) | ligA/zipA | DNA ligase, NAD(+)‑dependent/FtsZ stabilizer | |||||
| * | ? | NC_000913 | = 2583485 | 86 (0.870) | 6 (0.060) | 5/266 | NT | 7.1% | intergenic (‑7/+61) | nudK/aegA | GDP‑mannose pyrophosphatase/putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit |
| ? | NC_000913 | = 2583521 | 75 (0.790) | intergenic (‑43/+25) | nudK/aegA | GDP‑mannose pyrophosphatase/putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit | |||||
| * | ? | NC_000913 | 2728258 = | NA (NA) | 4 (0.040) | 3/264 | NT | NA | noncoding (927/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
| ? | NC_000913 | 2728336 = | NA (NA) | noncoding (849/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | 2729475 = | 70 (0.710) | 10 (0.110) | 7/258 | NT | 12.1% | intergenic (‑31/+141) | gltW/rrsG | tRNA‑Glu/16S ribosomal RNA of rrnG operon |
| ? | NC_000913 | = 4168363 | 80 (0.870) | intergenic (+163/‑9) | rrsB/gltT | 16S ribosomal RNA of rrnB operon/tRNA‑Glu | |||||
| * | ? | NC_000913 | 2730003 = | NA (NA) | 4 (0.040) | 4/264 | NT | NA | noncoding (1155/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon |
| ? | NC_000913 | 2730041 = | NA (NA) | noncoding (1117/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | = 2730286 | NA (NA) | 8 (0.090) | 8/262 | NT | NA | noncoding (872/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon |
| ? | NC_000913 | = 2730329 | NA (NA) | noncoding (829/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | = 2730312 | NA (NA) | 5 (0.050) | 4/264 | NT | NA | noncoding (846/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon |
| ? | NC_000913 | = 2730346 | NA (NA) | noncoding (812/1542 nt) | rrsG | 16S ribosomal RNA of rrnG operon | |||||
| * | ? | NC_000913 | 2734746 = | 84 (0.850) | 6 (0.060) | 6/266 | NT | 7.1% | coding (289/732 nt) | yfiH | UPF0124 family protein |
| ? | NC_000913 | 2734777 = | 77 (0.810) | coding (258/732 nt) | yfiH | UPF0124 family protein | |||||
| * | ? | NC_000913 | 2871564 = | 88 (0.890) | 8 (0.090) | 5/262 | NT | 9.6% | coding (217/480 nt) | ispF | 2C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
| ? | NC_000913 | 2871614 = | 68 (0.730) | coding (167/480 nt) | ispF | 2C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase | |||||
| * | ? | NC_000913 | 2939088 = | 104 (1.050) | 5 (0.050) | 5/262 | NT | 5.0% | coding (201/423 nt) | fucU | L‑fucose mutarotase |
| ? | NC_000913 | 2939115 = | 92 (0.990) | coding (228/423 nt) | fucU | L‑fucose mutarotase | |||||
| * | ? | NC_000913 | 2952718 = | 115 (1.160) | 6 (0.060) | 5/262 | NT | 5.2% | coding (3286/3543 nt) | recB | exonuclease V (RecBCD complex), beta subunit |
| ? | NC_000913 | 2952750 = | 109 (1.170) | coding (3254/3543 nt) | recB | exonuclease V (RecBCD complex), beta subunit | |||||
| * | ? | NC_000913 | 2968243 = | 91 (0.920) | 6 (0.060) | 6/266 | NT | 6.1% | coding (192/2247 nt) | ptsP | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein |
| ? | NC_000913 | 2968276 = | 98 (1.040) | coding (159/2247 nt) | ptsP | PEP‑protein phosphotransferase enzyme I; GAF domain containing protein | |||||
| * | ? | NC_000913 | 2974388 = | 107 (1.080) | 5 (0.050) | 5/262 | NT | 5.3% | coding (1627/2160 nt) | aas | fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase |
| ? | NC_000913 | 2974501 = | 79 (0.850) | coding (1514/2160 nt) | aas | fused 2‑acylglycerophospho‑ethanolamine acyl transferase/acyl‑acyl carrier protein synthetase | |||||
| * | ? | NC_000913 | = 3155439 | 90 (0.910) | 6 (0.060) | 4/268 | NT | 6.7% | coding (85/1164 nt) | yqhD | aldehyde reductase, NADPH‑dependent |
| ? | NC_000913 | = 3155473 | 81 (0.850) | coding (119/1164 nt) | yqhD | aldehyde reductase, NADPH‑dependent | |||||
| * | ? | NC_000913 | 3270812 = | 79 (0.800) | 4 (0.040) | 4/260 | NT | 5.2% | coding (959/1146 nt) | garK | glycerate kinase I |
| ? | NC_000913 | 3270907 = | 71 (0.770) | coding (864/1146 nt) | garK | glycerate kinase I | |||||
| * | ? | NC_000913 | = 3277814 | NA (NA) | 5 (0.050) | 4/262 | NT | NA | intergenic (+13/+42) | yhaV/agaR | toxin of the SohB(PrlF)‑YhaV toxin‑antitoxin system/transcriptional repressor of the aga regulon |
| ? | NC_000913 | = 3277847 | NA (NA) | noncoding (29/29 nt) | REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP238 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
| * | ? | NC_000913 | = 3411602 | 96 (0.970) | 9 (0.100) | 6/256 | NT | 8.9% | intergenic (+35/‑51) | fis/yhdJ | global DNA‑binding transcriptional dual regulator/DNA adenine methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 3411616 | 96 (1.050) | intergenic (+49/‑37) | fis/yhdJ | global DNA‑binding transcriptional dual regulator/DNA adenine methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | 3610761 = | 80 (0.810) | 5 (0.050) | 4/266 | NT | 5.7% | coding (973/1218 nt) | yhhS | putative arabinose efflux transporter |
| ? | NC_000913 | 3610828 = | 90 (0.950) | coding (906/1218 nt) | yhhS | putative arabinose efflux transporter | |||||
| * | ? | NC_000913 | 3613252 = | 104 (1.050) | 8 (0.080) | 6/266 | NT | 7.8% | coding (284/588 nt) | acpT | 4'‑phosphopantetheinyl transferase |
| ? | NC_000913 | 3613286 = | 90 (0.950) | coding (318/588 nt) | acpT | 4'‑phosphopantetheinyl transferase | |||||
| * | ? | NC_000913 | 3622440 = | NA (NA) | 4 (0.040) | 3/264 | NT | 5.5% | coding (3249/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3622465 = | 72 (0.730) | coding (3274/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3622466 = | NA (NA) | 9 (0.090) | 8/270 | NT | 16.8% | coding (3275/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | 3622497 = | 46 (0.460) | coding (3306/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
| * | ? | NC_000913 | 3660233 = | 98 (0.990) | 6 (0.060) | 5/270 | NT | 6.4% | coding (1002/1158 nt) | mdtE | anaerobic multidrug efflux transporter, ArcA‑regulated |
| ? | NC_000913 | 3660285 = | 80 (0.830) | coding (1054/1158 nt) | mdtE | anaerobic multidrug efflux transporter, ArcA‑regulated | |||||
| * | ? | NC_000913 | = 3677488 | 90 (0.910) | 5 (0.050) | 3/268 | NT | 5.5% | coding (863/2061 nt) | yhjG | putative inner membrane‑anchored periplasmic AsmA family protein |
| ? | NC_000913 | = 3677537 | 85 (0.890) | coding (814/2061 nt) | yhjG | putative inner membrane‑anchored periplasmic AsmA family protein | |||||
| * | ? | NC_000913 | 3852497 = | 94 (0.950) | 7 (0.070) | 5/274 | NT | 7.0% | coding (288/1689 nt) | ilvB | acetolactate synthase 2 large subunit |
| ? | NC_000913 | 3852582 = | 94 (0.960) | coding (203/1689 nt) | ilvB | acetolactate synthase 2 large subunit | |||||
| * | ? | NC_000913 | = 3854878 | 105 (1.060) | 7 (0.070) | 6/276 | NT | 6.6% | coding (957/1185 nt) | emrD | multidrug efflux system protein |
| ? | NC_000913 | = 3854940 | 94 (0.960) | coding (1019/1185 nt) | emrD | multidrug efflux system protein | |||||
| * | ? | NC_000913 | = 3869187 | 87 (0.880) | 5 (0.050) | 4/266 | NT | 5.4% | coding (123/1248 nt) | yidR | DUF3748 family protein |
| ? | NC_000913 | = 3869215 | 92 (0.970) | coding (95/1248 nt) | yidR | DUF3748 family protein | |||||
| * | ? | NC_000913 | 3883262 = | 123 (1.240) | 7 (0.070) | 6/266 | NT | 5.7% | coding (468/1404 nt) | dnaA | chromosomal replication initiator protein DnaA, DNA‑binding transcriptional dual regulator |
| ? | NC_000913 | 3883286 = | 115 (1.210) | coding (444/1404 nt) | dnaA | chromosomal replication initiator protein DnaA, DNA‑binding transcriptional dual regulator | |||||
| * | ? | NC_000913 | = 3885280 | 94 (0.950) | 8 (0.080) | 7/268 | NT | 7.8% | coding (205/1647 nt) | yidC | membrane protein insertase |
| ? | NC_000913 | = 3885315 | 99 (1.040) | coding (240/1647 nt) | yidC | membrane protein insertase | |||||
| * | ? | NC_000913 | = 3889141 | 91 (0.920) | 5 (0.050) | 5/258 | NT | 5.4% | coding (412/1416 nt) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent |
| ? | NC_000913 | = 3889190 | 92 (1.000) | coding (461/1416 nt) | tnaA | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent | |||||
| * | ? | NC_000913 | 3943442 = | NA (NA) | 3 (0.030) | 3/262 | NT | 6.0% | noncoding (8/76 nt) | gltU | tRNA‑Glu |
| ? | NC_000913 | 3943500 = | 50 (0.510) | noncoding (66/76 nt) | gltU | tRNA‑Glu | |||||
| * | ? | NC_000913 | = 3943661 | 41 (0.410) | 4 (0.040) | 4/274 | NT | 5.5% | intergenic (+151/‑43) | gltU/rrlC | tRNA‑Glu/23S ribosomal RNA of rrnC operon |
| ? | NC_000913 | = 4168638 | 96 (0.980) | intergenic (+191/‑3) | gltT/rrlB | tRNA‑Glu/23S ribosomal RNA of rrnB operon | |||||
| * | ? | NC_000913 | 4162091 = | NA (NA) | 3 (0.030) | 3/264 | NT | NA | coding (321/360 nt) | yijD | DUF1422 family inner membrane protein |
| ? | NC_000913 | 4162180 = | NA (NA) | coding (1091/1101 nt) | trmA | tRNA m(5)U54 methyltransferase, SAM‑dependent; tmRNA m(5)U341 methyltransferase | |||||
| * | ? | NC_000913 | = 4168341 | 70 (0.710) | 4 (0.040) | 4/258 | NT | 5.2% | intergenic (+141/‑31) | rrsB/gltT | 16S ribosomal RNA of rrnB operon/tRNA‑Glu |
| ? | NC_000913 | = 4168363 | 80 (0.870) | intergenic (+163/‑9) | rrsB/gltT | 16S ribosomal RNA of rrnB operon/tRNA‑Glu | |||||
| * | ? | NC_000913 | 4184513 = | 102 (1.030) | 7 (0.080) | 4/258 | NT | 7.2% | coding (3269/4029 nt) | rpoB | RNA polymerase, beta subunit |
| ? | NC_000913 | 4184558 = | 87 (0.950) | coding (3314/4029 nt) | rpoB | RNA polymerase, beta subunit | |||||
| * | ? | NC_000913 | 4231272 = | 81 (0.820) | 5 (0.050) | 5/264 | NT | 5.4% | intergenic (+46/+87) | rluF/yjbD | 23S rRNA pseudouridine(2604) synthase/DUF3811 family protein |
| ? | NC_000913 | 4231311 = | 97 (1.030) | intergenic (+85/+48) | rluF/yjbD | 23S rRNA pseudouridine(2604) synthase/DUF3811 family protein | |||||
| * | ? | NC_000913 | 4320612 = | 106 (1.070) | 6 (0.060) | 5/268 | NT | 5.8% | coding (52/1065 nt) | phnI | ribophosphonate triphosphate synthase complex putative catalytic subunit |
| ? | NC_000913 | 4320644 = | 94 (0.990) | coding (20/1065 nt) | phnI | ribophosphonate triphosphate synthase complex putative catalytic subunit | |||||
| * | ? | NC_000913 | 4341778 = | 85 (0.860) | 8 (0.090) | 6/242 | NT | 9.8% | intergenic (‑150/‑133) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding |
| ? | NC_000913 | 4341834 = | 74 (0.860) | intergenic (‑206/‑77) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding | |||||
| * | ? | NC_000913 | = 4341795 | 86 (0.870) | 4 (0.050) | 4/242 | NT | 5.1% | intergenic (‑167/‑116) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding |
| ? | NC_000913 | = 4341815 | 74 (0.860) | intergenic (‑187/‑96) | melR/melA | melibiose operon transcriptional regulator; autoregulator/alpha‑galactosidase, NAD(P)‑binding | |||||
| * | ? | NC_000913 | 4363384 = | 125 (1.260) | 6 (0.060) | 6/262 | NT | 5.0% | coding (1659/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC |
| ? | NC_000913 | 4363422 = | 108 (1.160) | coding (1621/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC | |||||
| * | ? | NC_000913 | = 4369155 | 81 (0.820) | 4 (0.040) | 4/258 | NT | 5.2% | intergenic (+15/+1) | fxsA/yjeH | suppressor of F exclusion of phage T7/putative transporter |
| ? | NC_000913 | = 4369174 | 72 (0.780) | coding (1239/1257 nt) | yjeH | putative transporter | |||||
| * | ? | NC_000913 | = 4375764 | 93 (0.940) | 5 (0.050) | 5/270 | NT | 5.1% | coding (66/567 nt) | efp | polyproline‑specific translation elongation factor EF‑P |
| ? | NC_000913 | = 4375795 | 97 (1.010) | coding (97/567 nt) | efp | polyproline‑specific translation elongation factor EF‑P | |||||
| * | ? | NC_000913 | 4409589 = | 98 (0.990) | 6 (0.060) | 6/264 | NT | 6.2% | coding (315/732 nt) | rlmB | 23S rRNA mG2251 2'‑O‑ribose methyltransferase, SAM‑dependent |
| ? | NC_000913 | 4409625 = | 88 (0.940) | coding (351/732 nt) | rlmB | 23S rRNA mG2251 2'‑O‑ribose methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | = 4412107 | 87 (0.880) | 7 (0.070) | 7/266 | NT | 7.6% | coding (129/399 nt) | yjfL | UPF0719 family inner membrane protein |
| ? | NC_000913 | = 4412139 | 86 (0.910) | coding (161/399 nt) | yjfL | UPF0719 family inner membrane protein | |||||
| * | ? | NC_000913 | 4440794 = | 117 (1.180) | 8 (0.090) | 6/262 | NT | 7.2% | coding (422/1344 nt) | ytfL | UPF0053 family inner membrane protein |
| ? | NC_000913 | 4440850 = | 97 (1.040) | coding (366/1344 nt) | ytfL | UPF0053 family inner membrane protein | |||||
| * | ? | NC_000913 | 4508527 = | NA (NA) | 3 (0.030) | 3/262 | NT | 8.3% | noncoding (153/1221 nt) | IS30 | repeat region |
| ? | NC_000913 | 4508572 = | 35 (0.350) | noncoding (108/1221 nt) | IS30 | repeat region | |||||
| * | ? | NC_000913 | = 4587020 | 91 (0.920) | 6 (0.060) | 4/270 | NT | 6.4% | coding (72/915 nt) | mrr | methylated adenine and cytosine restriction protein |
| ? | NC_000913 | = 4587052 | 86 (0.890) | coding (104/915 nt) | mrr | methylated adenine and cytosine restriction protein | |||||