Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
17 1 2
18 1 2
19 1 2
20 1 2
17181920 1 1
6 6 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 173 1123
Multiple Base Substitutions 4 37
Deletions 8 44
Insertions 5 17
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 190 1221

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 113 0 306.8 9564096 98.5% 9420634 150.0
A17 F55 I0 R1 217 0 81.2 3243344 95.0% 3081176 126.9
A17 F55 I4 R1 119 0 110.4 4066752 95.0% 3863414 126.5
A18 F53 I0 R2 221 0 66.0 2680176 94.9% 2543487 126.9
A18 F53 I5 R2 122 0 92.4 3471984 95.3% 3308800 125.2
A19 F53 I0 R3 198 0 62.2 2365906 95.5% 2259440 127.1
A19 F53 I19 R3 125 0 83.6 3029080 95.4% 2889742 127.2
A20 F53 I0 R4 206 0 63.7 2487030 95.4% 2372626 127.0
A20 F53 I6 R4 121 0 75.7 2723416 94.9% 2584521 126.6
A17181920 F51 I0 R1 152 0 403.6 11685478 99.6% 11638736 150.0

Mutation Needle Plot

Mutation Targets

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