Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
25 3 4
27 3 4
29 3 4
31 3 4
33 3 4
35 3 4
7 19 25

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 55 90
Multiple Base Substitutions 0 0
Deletions 16 21
Insertions 4 5
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 75 116

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 48 0 63.8 2989836 94.5% 2825395 139.3
A25 F31 I1 R1 52 0 74.8 3427880 95.9% 3287336 140.1
A25 F65 I1 R1 54 0 67.4 3062340 94.9% 2906160 143.0
A25 F97 I0 R1 1474 0 64.2 2944624 94.5% 2782669 142.4
A25 F97 I2 R1 53 0 34.1 1481730 96.7% 1432832 145.4
A27 F32 I1 R1 51 0 78.2 3543018 96.8% 3429641 140.3
A27 F70 I1 R1 51 0 61.9 2820822 94.4% 2662855 143.1
A27 F103 I0 R1 1944 0 64.6 3028270 94.5% 2861715 139.1
A27 F103 I2 R1 53 0 26.2 1149136 96.7% 1111214 146.0
A29 F30 I1 R1 49 0 67.0 3209490 94.5% 3032968 136.5
A29 F70 I1 R1 51 0 61.1 2128416 97.9% 2083719 143.3
A29 F103 I0 R1 1598 0 65.5 2981504 94.5% 2817521 143.5
A29 F103 I2 R1 56 0 33.1 1447206 96.8% 1400895 146.4
A31 F32 I1 R1 50 0 47.4 2586122 79.4% 2053380 142.2
A31 F71 I1 R1 49 0 75.1 3449406 94.4% 3256239 141.9
A31 F102 I0 R1 1608 0 65.8 2992998 94.4% 2825390 143.4
A31 F102 I2 R1 51 0 34.4 1543226 95.2% 1469151 145.9
A33 F34 I1 R1 50 0 70.4 3192274 95.0% 3032660 143.0
A33 F73 I1 R1 50 0 69.3 3036344 97.6% 2963471 144.0
A33 F108 I0 R1 1516 0 67.7 3068284 94.5% 2899528 143.6
A33 F108 I2 R1 57 0 30.6 1340174 96.7% 1295948 146.4
A35 F29 I1 R1 50 0 68.6 3227278 94.5% 3049777 138.4
A35 F63 I1 R1 54 0 79.3 3353216 98.0% 3286151 140.1
A35 F96 I0 R1 1217 0 68.5 3126774 94.7% 2961054 144.2
A35 F96 I2 R1 49 0 36.4 1582184 97.0% 1534718 145.8

Mutation Needle Plot

Mutation Targets

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