breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	freq	annotation	gene	description
RA	36,169	G→T	6.0%	intergenic (+54/+29)	PP_0032 → / ← PP_0033	hypothetical protein/undecaprenyl‑glycosyl transferase
RA	47,140	C→G	7.8%	A745A (GCG→GCC) ‡	czcA‑I ←	cation efflux system protein
RA	47,141	G→C	7.6%	A745G (GCG→GGG) ‡	czcA‑I ←	cation efflux system protein
RA	47,142	C→G	9.1%	A745P (GCG→CCG) ‡	czcA‑I ←	cation efflux system protein
RA	58,747	T→A	8.4%	intergenic (‑658/+30)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	58,750	T→A	8.5%	intergenic (‑661/+27)	PP_5424 ← / ← PP_0050	hypothetical protein/hypothetical protein
RA	68,340	G→T	6.2%	intergenic (+28/+147)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,342	A→T	5.8%	intergenic (+30/+145)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	68,344	A→C	5.5%	intergenic (+32/+143)	PP_0057 → / ← PP_0058	major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase
RA	101,802	A→C	8.3%	K208Q (AAG→CAG) ‡	prlC →	oligopeptidase A
RA	101,803	A→T	8.3%	K208M (AAG→ATG) ‡	prlC →	oligopeptidase A
RA	101,804	G→T	8.6%	K208N (AAG→AAT) ‡	prlC →	oligopeptidase A
RA	110,223	C→T	7.5%	G81G (GGC→GGT)	ctaD →	cytochrome c oxidase subunit 1
RA	138,950	T→G	6.8%	R518S (AGA→AGC)	kinB ←	alginate biosynthesis sensor protein KinB
RA	146,127	T→A	8.9%	intergenic (+32/‑116)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	146,128	T→A	9.3%	intergenic (+33/‑115)	gltP → / → PP_0138	glutamate/aspartate‑proton DAACS transporter/membrane protein
RA	154,906	C→A	7.0%	L130L (CTG→CTT) ‡	yjbB ←	Na+/Pi‑cotransporter
RA	154,908	G→C	6.8%	L130V (CTG→GTG) ‡	yjbB ←	Na+/Pi‑cotransporter
RA	154,910	T→G	8.9%	Q129P (CAA→CCA)	yjbB ←	Na+/Pi‑cotransporter
RA	155,543	G→T	5.3%	intergenic (‑248/+35)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	155,546	A→C	5.3%	intergenic (‑251/+32)	yjbB ← / ← ygdQ	Na+/Pi‑cotransporter/transport protein
RA	160,513	A→C	5.1%	F65V (TTC→GTC)	PP_0150 ←	hypothetical protein
RA	160,517	T→G	5.4%	A63A (GCA→GCC) ‡	PP_0150 ←	hypothetical protein
RA	160,518	G→C	5.4%	A63G (GCA→GGA) ‡	PP_0150 ←	hypothetical protein
RA	160,519	C→A	5.4%	A63S (GCA→TCA) ‡	PP_0150 ←	hypothetical protein
RA	161,731	G→T	9.2%	intergenic (‑226/+20)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	161,733	A→C	15.8%	intergenic (‑228/+18)	PP_0152 ← / ← PP_0153	hypothetical protein/hypothetical protein
RA	162,281	A→T	9.5%	intergenic (‑315/+59)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,282	A→T	8.9%	intergenic (‑316/+58)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,292	G→T	6.6%	intergenic (‑326/+48)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	162,293	A→G	5.2%	intergenic (‑327/+47)	PP_0153 ← / ← scpC	hypothetical protein/propionyl‑CoA:succinate CoA transferase
RA	181,805	T→C	11.4%	intergenic (+19/‑87)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,811	C→T	11.7%	intergenic (+25/‑81)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,812	A→G	11.6%	intergenic (+26/‑80)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	181,818	G→A	11.6%	intergenic (+32/‑74)	PP_r01 → / → PP_5SB	5S ribosomal RNA/5S ribosomal RNA
RA	182,034	G→A	7.2%	intergenic (+23/+42)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,035	A→T	7.5%	intergenic (+24/+41)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	182,036	T→C	7.4%	intergenic (+25/+40)	PP_5SB → / ← PP_0160	5S ribosomal RNA/ferrioxamine receptor
RA	188,613	T→C	6.0%	L241P (CTG→CCG)	PP_0165 →	GGDEF domain‑containing protein
RA	188,615	A→G	5.9%	T242A (ACC→GCC) ‡	PP_0165 →	GGDEF domain‑containing protein
RA	188,616	C→T	5.9%	T242I (ACC→ATC) ‡	PP_0165 →	GGDEF domain‑containing protein
RA	188,618	G→A	6.0%	G243R (GGG→AGG)	PP_0165 →	GGDEF domain‑containing protein
RA	195,559	C→A	25.9%	T355T (ACC→ACA)	PP_0168 →	putative surface adhesion protein
RA	195,628	C→T	8.1%	D378D (GAC→GAT)	PP_0168 →	putative surface adhesion protein
RA	195,629	A→G	8.2%	T379A (ACC→GCC)	PP_0168 →	putative surface adhesion protein
RA	195,634	C→T	41.8%	T380T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	196,306	T→C	19.0%	N604N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	196,327	A→C	20.6%	T611T (ACA→ACC)	PP_0168 →	putative surface adhesion protein
RA	196,351	C→G	25.5%	T619T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	196,390	T→C	26.2%	D632D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,032	C→T	7.6%	T846T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,089	T→C	14.9%	N865N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	197,179	A→G	8.2%	V895V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	197,185	C→T	5.6%	T897T (ACC→ACT)	PP_0168 →	putative surface adhesion protein
RA	197,551	C→G	17.4%	T1019T (ACC→ACG)	PP_0168 →	putative surface adhesion protein
RA	197,572	G→A	23.9%	K1026K (AAG→AAA)	PP_0168 →	putative surface adhesion protein
RA	197,590	T→C	23.6%	D1032D (GAT→GAC)	PP_0168 →	putative surface adhesion protein
RA	197,632	T→C	9.7%	T1046T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	197,695	G→C	8.6%	T1067T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	201,328	G→C	6.8%	T2278T (ACG→ACC)	PP_0168 →	putative surface adhesion protein
RA	201,346	A→G	6.7%	V2284V (GTA→GTG)	PP_0168 →	putative surface adhesion protein
RA	201,361	A→G	7.2%	K2289K (AAA→AAG)	PP_0168 →	putative surface adhesion protein
RA	201,373	T→C	7.1%	T2293T (ACT→ACC)	PP_0168 →	putative surface adhesion protein
RA	201,385	T→C	7.3%	N2297N (AAT→AAC)	PP_0168 →	putative surface adhesion protein
RA	222,263	C→T	5.6%	Q40* (CAA→TAA) ‡	PP_0170 →	ABC transporter substrate‑binding protein
RA	222,264	A→T	5.5%	Q40L (CAA→CTA) ‡	PP_0170 →	ABC transporter substrate‑binding protein
RA	222,265	A→G	5.5%	Q40Q (CAA→CAG) ‡	PP_0170 →	ABC transporter substrate‑binding protein
RA	233,832	A→T	9.1%	intergenic (+20/+43)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,833	C→G	8.5%	intergenic (+21/+42)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,834	A→T	9.8%	intergenic (+22/+41)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	233,846	A→G	10.1%	intergenic (+34/+29)	PP_0180 → / ← PP_0181	cytochrome c family protein/hypothetical protein
RA	235,410	A→C	5.4%	intergenic (+107/+18)	PP_0183 → / ← argH	glutathione S‑transferase/argininosuccinate lyase
RA	239,456	A→G	9.4%	E179E (GAA→GAG)	hemD →	uroporphyrinogen‑III synthase
RA	239,460	G→T	9.2%	E181* (GAA→TAA) ‡	hemD →	uroporphyrinogen‑III synthase
RA	239,461	A→T	9.2%	E181V (GAA→GTA) ‡	hemD →	uroporphyrinogen‑III synthase
RA	239,462	A→C	9.2%	E181D (GAA→GAC) ‡	hemD →	uroporphyrinogen‑III synthase
RA	239,466	C→T	10.5%	L183F (CTC→TTC)	hemD →	uroporphyrinogen‑III synthase
RA	243,969	G→A	7.3%	Q68* (CAA→TAA)	fkl ←	FKBP‑type peptidyl‑prolyl cis‑trans isomerase
RA	253,348	T→C	6.2%	intergenic (‑133/+38)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,356	C→T	7.3%	intergenic (‑141/+30)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,358	A→T	7.5%	intergenic (‑143/+28)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,359	A→T	7.1%	intergenic (‑144/+27)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,361	A→G	7.5%	intergenic (‑146/+25)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	253,369	G→A	7.7%	intergenic (‑154/+17)	PP_0202 ← / ← PP_0203	CBS domain‑containing protein/dipeptidase
RA	274,791	C→A	8.7%	G386V (GGC→GTC)	PP_0222 ←	DszA family monooxygenase
RA	278,742:1	+A	100%	intergenic (‑237/+77)	PP_0224 ← / ← sctC	DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein
RA	280,199	A→C	5.2%	L17R (CTG→CGG) ‡	sctS ←	sulfur compound ABC transporter permease
RA	280,200	G→T	5.3%	L17M (CTG→ATG) ‡	sctS ←	sulfur compound ABC transporter permease
RA	280,201	C→G	5.3%	L16L (CTG→CTC)	sctS ←	sulfur compound ABC transporter permease
RA	284,586	T→A	6.2%	intergenic (+33/+30)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	284,587	T→A	6.7%	intergenic (+34/+29)	betT‑II → / ← atsK	choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase
RA	292,127	A→G	6.0%	D170G (GAC→GGC)	ssuA →	aliphatic sulfonatesABC transporter substrate‑binding protein
RA	307,865:1	+C	100%	intergenic (+880/‑989)	hslO → / → PP_0254	molecular chaperone HslO/hypothetical protein
RA	322,133	G→A	22.0%	intergenic (+420/+38)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	322,140	T→C	24.1%	intergenic (+427/+31)	aguA → / ← PP_0267	agmatine deiminase/ferric siderophore receptor
RA	323,872	G→A	6.8%	D123D (GAC→GAT)	PP_0267 ←	ferric siderophore receptor
RA	334,604	A→T	7.2%	L28M (TTG→ATG)	PP_0276 ←	Cro/CI family transcriptional regulator
RA	334,836	T→G	7.6%	intergenic (‑151/+137)	PP_0276 ← / ← PP_t73	Cro/CI family transcriptional regulator/tRNA‑Thr
RA	336,124:1	+T	100%	coding (209/237 nt)	PP_0278 →	hypothetical protein
RA	337,809	A→G	10.4%	intergenic (‑59/+70)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,816:1	+A	10.9%	intergenic (‑66/+63)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,819	A→C	14.3%	intergenic (‑69/+60)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,822	C→G	13.9%	intergenic (‑72/+57)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,825	G→T	14.6%	intergenic (‑75/+54)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	337,827	Δ1 bp	13.0%	intergenic (‑77/+52)	PP_0279 ← / ← PP_0280	hypothetical protein/amino acid ABC transporter permease
RA	344,032	A→G	5.7%	intergenic (+121/+68)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,041	Δ1 bp	9.8%	intergenic (+130/+59)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	344,045:1	+T	10.0%	intergenic (+134/+55)	PP_5440 → / ← PP_t72	hypothetical protein/tRNA‑Phe
RA	346,118	G→A	5.7%	N576N (AAC→AAT) ‡	PP_0287 ←	hypothetical protein
RA	346,119	T→A	5.7%	N576I (AAC→ATC) ‡	PP_0287 ←	hypothetical protein
RA	346,120	T→C	5.7%	N576D (AAC→GAC) ‡	PP_0287 ←	hypothetical protein
RA	353,067	A→G	100%	intergenic (+34/+84)	hisF → / ← cbcV	imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein
RA	353,790	C→G	6.1%	R180R (CGG→CGC)	cbcV ←	choline/betaine/carnitine ABC transporter ATP binding protein
RA	358,085	A→G	13.7%	intergenic (+53/‑77)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,087	C→T	12.0%	intergenic (+55/‑75)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,090	T→C	12.9%	intergenic (+58/‑72)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,091	G→A	12.3%	intergenic (+59/‑71)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,094	A→G	12.0%	intergenic (+62/‑68)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	358,096	C→T	12.9%	intergenic (+64/‑66)	tdcG‑I → / → PP_5441	L‑serine dehydratase/hypothetical protein
RA	359,681	G→A	8.4%	intergenic (+41/+79)	gbdR → / ← PP_0299	AraC family transcriptional regulator/hypothetical protein
RA	371,116	C→A	9.5%	R199R (CGC→CGA)	dgcA →	dimethylglycine dehydrogenase subunit
RA	371,119	G→T	9.0%	M200I (ATG→ATT)	dgcA →	dimethylglycine dehydrogenase subunit
RA	371,120	A→T	8.9%	K201* (AAA→TAA) ‡	dgcA →	dimethylglycine dehydrogenase subunit
RA	371,121	A→C	9.0%	K201T (AAA→ACA) ‡	dgcA →	dimethylglycine dehydrogenase subunit
RA	371,124	T→G	8.2%	F202C (TTC→TGC)	dgcA →	dimethylglycine dehydrogenase subunit
RA	373,069	T→A	7.3%	I104N (ATC→AAC)	dgcB →	dimethylglycine dehydrogenase subunit
RA	385,476	C→G	6.8%	intergenic (+16/+19)	PP_0320 → / ← ltaE	methyl‑accepting chemotaxis transducer/low specificity l‑threonine aldolase
RA	408,625	T→C	8.0%	Y680C (TAC→TGC)	aceE ←	pyruvate dehydrogenase E1 component
RA	427,533	G→C	5.1%	A89G (GCC→GGC)	PP_0350 ←	ferrichrome‑iron receptor
RA	427,540	G→A	5.2%	L87L (CTG→TTG)	PP_0350 ←	ferrichrome‑iron receptor
RA	427,542	G→C	6.3%	A86G (GCC→GGC)	PP_0350 ←	ferrichrome‑iron receptor
RA	427,752	A→C	5.9%	L16R (CTG→CGG) ‡	PP_0350 ←	ferrichrome‑iron receptor
RA	427,753	G→T	5.3%	L16M (CTG→ATG) ‡	PP_0350 ←	ferrichrome‑iron receptor
RA	428,748	G→A	5.9%	L87L (CTG→TTG)	PP_0351 ←	transmembrane sensor
RA	431,343	A→G	6.6%	I324T (ATC→ACC)	PP_0354 ←	CBS domain‑containing protein
RA	431,350	C→T	6.6%	G322S (GGC→AGC)	PP_0354 ←	CBS domain‑containing protein
RA	431,355	A→G	6.6%	L320P (CTG→CCG)	PP_0354 ←	CBS domain‑containing protein
RA	431,362	C→T	6.7%	V318I (GTT→ATT)	PP_0354 ←	CBS domain‑containing protein
RA	435,321	A→C	6.5%	intergenic (‑122/‑328)	glcB ← / → PP_0357	malate synthase G/ACT domain‑containing protein
RA	437,484	T→G	10.1%	A292A (GCA→GCC)	rdoA ←	serine/threonine protein kinase
RA	437,487	C→T	10.3%	L291L (CTG→CTA) ‡	rdoA ←	serine/threonine protein kinase
RA	437,488	A→G	10.5%	L291P (CTG→CCG) ‡	rdoA ←	serine/threonine protein kinase
RA	437,491	C→A	10.3%	W290L (TGG→TTG)	rdoA ←	serine/threonine protein kinase
RA	445,086	T→G	10.7%	intergenic (+59/‑229)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,087	G→A	12.9%	intergenic (+60/‑228)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,088	C→G	10.7%	intergenic (+61/‑227)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,090	T→C	10.5%	intergenic (+63/‑225)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,095	T→C	12.6%	intergenic (+68/‑220)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,105	A→T	14.9%	intergenic (+78/‑210)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,107	T→G	13.8%	intergenic (+80/‑208)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,115	G→A	13.2%	intergenic (+88/‑200)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,120	G→A	8.9%	intergenic (+93/‑195)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,122	C→G	9.1%	intergenic (+95/‑193)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,123	T→C	9.5%	intergenic (+96/‑192)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	445,124	C→A	11.8%	intergenic (+97/‑191)	PP_0367 → / → PP_0368	hypothetical protein/acyl‑CoA dehydrogenase
RA	447,768	A→T	7.3%	E116V (GAG→GTG)	PP_0369 →	diguanylate cyclase
RA	447,777	A→T	7.1%	H119L (CAC→CTC)	PP_0369 →	diguanylate cyclase
RA	467,098	A→G	8.5%	intergenic (‑31/+22)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	467,101	C→T	9.1%	intergenic (‑34/+19)	PP_5445 ← / ← PP_t71	hypothetical protein/tRNA‑Met
RA	484,688	C→T	5.5%	intergenic (‑250/+33)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,692	G→C	5.7%	intergenic (‑254/+29)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	484,696	A→G	5.4%	intergenic (‑258/+25)	yeaG ← / ← glpE	protein kinase/thiosulfate sulfurtransferase GlpE
RA	499,203	A→G	100%	intergenic (+47/‑249)	uhpA → / → PP_0411	two‑component system response regulator UhpA/polyamine ABC transporter ATP‑binding protein
RA	503,592	T→C	5.9%	F208S (TTT→TCT) ‡	PP_0414 →	polyamine ABC transporter permease
RA	503,593	T→A	5.9%	F208L (TTT→TTA) ‡	PP_0414 →	polyamine ABC transporter permease
RA	521,212	T→C	9.1%	E28E (GAA→GAG) ‡	anmK ←	anhydro‑N‑acetylmuramic acid kinase
RA	521,214	C→T	8.9%	E28K (GAA→AAA) ‡	anmK ←	anhydro‑N‑acetylmuramic acid kinase
RA	521,215	A→G	9.4%	L27L (CTT→CTC) ‡	anmK ←	anhydro‑N‑acetylmuramic acid kinase
RA	521,217	G→A	8.7%	L27F (CTT→TTT) ‡	anmK ←	anhydro‑N‑acetylmuramic acid kinase
RA	524,349	G→C	8.6%	intergenic (+216/‑600)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	524,352	G→C	8.1%	intergenic (+219/‑597)	tyrS → / → PP_16SC	tyrosine‑‑tRNA ligase/16S ribosomal RNA
RA	538,047	T→A	5.1%	I142N (ATC→AAC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	538,049	A→G	7.5%	N143D (AAC→GAC)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	543,727	A→G	8.7%	N656S (AAC→AGC)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	543,730	C→T	8.9%	A657V (GCT→GTT)	rpoC →	DNA‑directed RNA polymerase subunit beta'
RA	553,686	C→T	6.9%	R78C (CGC→TGC)	rpsS →	30S ribosomal protein S19
RA	557,332	Δ1 bp	7.2%	intergenic (+75/‑134)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	557,336:1	+A	7.3%	intergenic (+79/‑130)	rpsN → / → rpsH	30S ribosomal protein S14/30S ribosomal protein S8
RA	563,005	C→A	9.5%	P30T (CCT→ACT) ‡	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	563,006	C→G	9.4%	P30R (CCT→CGT) ‡	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	563,007	T→G	9.7%	P30P (CCT→CCG) ‡	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	563,783	T→C	100%	L289S (TTG→TCG)	rpoA →	DNA‑directed RNA polymerase subunit alpha
RA	565,986	T→A	8.3%	intergenic (+26/‑138)	katA → / → bfr‑I	catalase/bacterioferritin
RA	565,987	C→A	7.3%	intergenic (+27/‑137)	katA → / → bfr‑I	catalase/bacterioferritin
RA	565,990	T→G	7.7%	intergenic (+30/‑134)	katA → / → bfr‑I	catalase/bacterioferritin
RA	565,991	T→A	7.7%	intergenic (+31/‑133)	katA → / → bfr‑I	catalase/bacterioferritin
RA	571,617	G→A	7.5%	intergenic (+43/+48)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	571,618	T→C	7.6%	intergenic (+44/+47)	ssb → / ← PP_0486	single‑stranded DNA‑binding protein/GntR family transcriptional regulator
RA	583,396	T→C	10.2%	V421A (GTG→GCG) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,397	G→C	10.2%	V421V (GTG→GTC) ‡	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	583,398	G→A	10.0%	A422T (GCC→ACC)	selB →	selenocysteyl‑tRNA‑specific translation elongation factor
RA	602,109	T→C	6.3%	L94P (CTG→CCG)	ribE →	riboflavin synthase
RA	604,469	C→T	5.7%	P101S (CCA→TCA) ‡	nusB →	transcription antitermination protein
RA	604,470	C→G	5.7%	P101R (CCA→CGA) ‡	nusB →	transcription antitermination protein
RA	604,471	A→G	5.7%	P101P (CCA→CCG) ‡	nusB →	transcription antitermination protein
RA	648,506	A→G	5.4%	L391P (CTG→CCG)	accC ←	acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,509	T→A	5.4%	K390M (AAG→ATG) ‡	accC ←	acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,510	T→A	5.4%	K390* (AAG→TAG) ‡	accC ←	acetyl‑CoA carboxylase biotin carboxylase subunit
RA	648,513	C→T	5.5%	G389S (GGC→AGC)	accC ←	acetyl‑CoA carboxylase biotin carboxylase subunit
RA	655,052	C→A	6.0%	A431S (GCG→TCG)	PP_0563 ←	two‑component system response regulator
RA	660,589	G→A	9.2%	V545V (GTG→GTA)	speA →	biosynthetic arginine decarboxylase
RA	660,592	T→C	8.9%	G546G (GGT→GGC)	speA →	biosynthetic arginine decarboxylase
RA	660,593	G→A	8.9%	A547T (GCC→ACC)	speA →	biosynthetic arginine decarboxylase
RA	660,596	T→C	8.6%	Y548H (TAC→CAC)	speA →	biosynthetic arginine decarboxylase
RA	660,895	T→A	5.9%	intergenic (+27/‑140)	speA → / → PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
RA	660,897	T→C	6.0%	intergenic (+29/‑138)	speA → / → PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
RA	660,902	C→G	6.0%	intergenic (+34/‑133)	speA → / → PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
RA	660,909	T→C	5.7%	intergenic (+41/‑126)	speA → / → PP_0568	biosynthetic arginine decarboxylase/hypothetical protein
RA	671,319	A→T	10.6%	E125V (GAA→GTA)	PP_0573 →	hypothetical protein
RA	671,325	A→T	9.3%	Q127L (CAG→CTG)	PP_0573 →	hypothetical protein
RA	682,199	G→C	9.6%	F358L (TTC→TTG)	PP_0584 ←	methyl‑accepting chemotaxis transducer
RA	682,312	G→T	6.1%	P321T (CCG→ACG)	PP_0584 ←	methyl‑accepting chemotaxis transducer
RA	682,317	A→C	7.8%	V319G (GTG→GGG)	PP_0584 ←	methyl‑accepting chemotaxis transducer
RA	698,297	A→G	7.2%	noncoding (474/1522 nt)	PP_16SD →	16S ribosomal RNA
RA	699,722	A→G	41.6%	intergenic (+115/‑129)	PP_t06 → / → PP_23SD	tRNA‑Ala/23S ribosomal RNA
RA	702,764	T→G	9.0%	intergenic (+12/‑120)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,765	A→T	9.4%	intergenic (+13/‑119)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	702,766	C→A	8.9%	intergenic (+14/‑118)	PP_23SD → / → PP_5SD	23S ribosomal RNA/5S ribosomal RNA
RA	707,561	T→C	6.9%	intergenic (‑213/‑38)	rpsT ← / → murJ	30S ribosomal protein S20/lipid II flippase
RA	714,186	T→A	7.2%	V67D (GTC→GAC)	ispH →	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase
RA	715,009:1	+T	8.6%	intergenic (+75/+2)	ispH → / ← PP_0607	4‑hydroxy‑3‑methylbut‑2‑enyl diphosphate reductase/type IV pili biogenesis protein FimT
RA	715,016	Δ1 bp	8.4%	coding (478/483 nt)	PP_0607 ←	type IV pili biogenesis protein FimT
RA	743,430	G→A	9.6%	intergenic (+109/+165)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,432	A→C	9.9%	intergenic (+111/+163)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,439	T→G	10.7%	intergenic (+118/+156)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,440	T→A	9.8%	intergenic (+119/+155)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,441	C→A	10.6%	intergenic (+120/+154)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,448	G→T	11.7%	intergenic (+127/+147)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,450	T→C	8.2%	intergenic (+129/+145)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	743,460	A→G	6.6%	intergenic (+139/+135)	PP_0635 → / ← PP_0636	group II intron‑encoding maturase/cold shock DNA‑binding domain‑containing protein
RA	762,983	T→A	7.2%	I10N (ATT→AAT)	PP_0655 →	fimbrial‑like protein
RA	764,568	G→A	6.0%	G259G (GGC→GGT)	PP_0657 ←	amino acid ABC transporter substrate‑binding protein
RA	772,178	T→C	6.7%	intergenic (+39/‑160)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,179	T→G	6.7%	intergenic (+40/‑159)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,182	C→A	6.7%	intergenic (+43/‑156)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	772,183	G→A	6.6%	intergenic (+44/‑155)	PP_0663 → / → PP_0664	AsnC family transcriptional regulator/homoserine dehydrogenase
RA	780,556	A→C	5.7%	intergenic (‑86/+36)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	780,558	T→A	5.8%	intergenic (‑88/+34)	PP_0670 ← / ← glyA‑II	bile acid/Na+ symporter family transporter/serine hydroxymethyltransferase
RA	838,715	A→C	7.1%	intergenic (‑18/+41)	rplY ← / ← prs	50S ribosomal protein L25/general stress protein Ctc/ribose‑phosphate pyrophosphokinase
RA	842,515	Δ1 bp	6.1%	coding (535/1722 nt)	PP_0725 ←	TPR repeat‑containing protein
RA	853,762	G→A	9.3%	R62H (CGT→CAT) ‡	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	853,763	T→C	9.1%	R62R (CGT→CGC) ‡	prmC →	release factor‑(glutamine‑N5) methyltransferase
RA	854,655	T→C	7.3%	V85A (GTC→GCC)	moeB →	molybdopterin synthase adenylyltransferase subunit
RA	854,659	C→G	7.1%	D86E (GAC→GAG)	moeB →	molybdopterin synthase adenylyltransferase subunit
RA	854,663	G→A	7.1%	A88T (GCC→ACC)	moeB →	molybdopterin synthase adenylyltransferase subunit
RA	857,147	Δ1 bp	7.3%	coding (238/699 nt)	PP_0738 ←	hypothetical protein
RA	870,231	A→C	7.1%	A64A (GCT→GCG)	PP_5456 ←	hypothetical protein
RA	884,556	T→G	6.9%	L156R (CTG→CGG)	PP_0767 →	LuxR family transcriptional regulator
RA	884,558	G→C	6.9%	A157P (GCC→CCC)	PP_0767 →	LuxR family transcriptional regulator
RA	884,562	A→T	7.0%	Q158L (CAG→CTG)	PP_0767 →	LuxR family transcriptional regulator
RA	884,566	G→C	7.5%	G159G (GGG→GGC)	PP_0767 →	LuxR family transcriptional regulator
RA	884,568	C→A	7.5%	P160Q (CCG→CAG)	PP_0767 →	LuxR family transcriptional regulator
RA	902,585	A→T	6.1%	intergenic (+11/+65)	trxB → / ← nadC	thioredoxin reductase/quinolinate phosphoribosyltransferase
RA	922,097	C→T	7.0%	V311I (GTA→ATA)	PP_0803 ←	protein secretion ABC transporter permease
RA	931,487	C→T	7.5%	R4712H (CGC→CAC)	PP_0806 ←	surface adhesion protein
RA	931,497	G→T	9.3%	L4709I (CTC→ATC)	PP_0806 ←	surface adhesion protein
RA	936,213	T→C	6.0%	N3137D (AAC→GAC)	PP_0806 ←	surface adhesion protein
RA	936,221	G→C	6.4%	A3134G (GCC→GGC)	PP_0806 ←	surface adhesion protein
RA	936,227	G→C	6.0%	T3132S (ACC→AGC) ‡	PP_0806 ←	surface adhesion protein
RA	936,228	T→C	6.0%	T3132A (ACC→GCC) ‡	PP_0806 ←	surface adhesion protein
RA	944,826	A→T	6.0%	S266T (TCG→ACG)	PP_0806 ←	surface adhesion protein
RA	947,371	G→C	10.3%	intergenic (‑3/‑153)	norR ← / → hmp	DNA‑binding transcriptional regulator/flavohemoprotein
RA	947,375	T→C	10.0%	intergenic (‑7/‑149)	norR ← / → hmp	DNA‑binding transcriptional regulator/flavohemoprotein
RA	947,377	C→A	9.5%	intergenic (‑9/‑147)	norR ← / → hmp	DNA‑binding transcriptional regulator/flavohemoprotein
RA	947,380	T→G	9.5%	intergenic (‑12/‑144)	norR ← / → hmp	DNA‑binding transcriptional regulator/flavohemoprotein
RA	947,382	G→A	9.5%	intergenic (‑14/‑142)	norR ← / → hmp	DNA‑binding transcriptional regulator/flavohemoprotein
RA	947,386	G→C	10.5%	intergenic (‑18/‑138)	norR ← / → hmp	DNA‑binding transcriptional regulator/flavohemoprotein
RA	951,882	T→C	7.5%	L238S (TTG→TCG)	cyoB →	cytochrome bo terminal oxidase subunit I
RA	997,747	A→G	5.6%	intergenic (‑152/+80)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,751	G→C	5.5%	intergenic (‑156/+76)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,753	A→G	5.5%	intergenic (‑158/+74)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,754	A→G	5.5%	intergenic (‑159/+73)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	997,755	C→T	5.2%	intergenic (‑160/+72)	PP_0860 ← / ← PP_0861	sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor
RA	1,013,228	A→T	14.0%	intergenic (+56/+75)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,234	C→A	13.6%	intergenic (+62/+69)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,235	A→T	13.1%	intergenic (+63/+68)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,241	G→C	13.6%	intergenic (+69/+62)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,242	G→C	13.6%	intergenic (+70/+61)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,248	A→T	15.8%	intergenic (+76/+55)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,249	T→G	14.7%	intergenic (+77/+54)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,013,255	A→T	20.1%	intergenic (+83/+48)	prfC → / ← potF‑I	peptide chain release factor 3/putrescine‑binding protein
RA	1,016,199	C→T	8.3%	T14T (ACG→ACA)	PP_0875 ←	hypothetical protein
RA	1,017,834	C→T	8.1%	G10S (GGT→AGT)	PP_5461 ←	hypothetical protein
RA	1,017,836	A→T	7.9%	L9* (TTA→TAA) ‡	PP_5461 ←	hypothetical protein
RA	1,017,837	A→T	7.9%	L9I (TTA→ATA) ‡	PP_5461 ←	hypothetical protein
RA	1,017,839	A→G	7.9%	L8P (CTT→CCT)	PP_5461 ←	hypothetical protein
RA	1,022,797	T→A	6.4%	N306Y (AAT→TAT)	dppA‑I ←	dipeptide ABC transporter substrate‑binding protein
RA	1,034,960	T→C	6.3%	L333L (TTG→CTG)	PP_0892 →	phospholipase family protein
RA	1,034,963	A→T	5.3%	T334S (ACA→TCA)	PP_0892 →	phospholipase family protein
RA	1,034,966	G→A	5.3%	A335T (GCG→ACG)	PP_0892 →	phospholipase family protein
RA	1,037,951	T→C	6.7%	N482D (AAC→GAC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,037,954	T→C	6.7%	S481G (AGC→GGC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,037,957	C→G	6.8%	D480H (GAC→CAC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,037,958	C→G	6.8%	V479V (GTG→GTC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,037,961	G→A	6.6%	A478A (GCC→GCT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,037,964	G→A	6.5%	V477V (GTC→GTT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,222	C→A	8.2%	P391P (CCG→CCT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,225	G→C	8.6%	G390G (GGC→GGG)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,228	G→A	8.8%	A389A (GCC→GCT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,231	T→C	8.8%	P388P (CCA→CCG)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,234	G→C	7.3%	G387G (GGC→GGG)	PP_0897 ←	class 1 fumarate hydratase
RA	1,038,237	T→G	7.2%	V386V (GTA→GTC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,146	G→T	5.4%	R83R (CGC→CGA)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,262	G→C	5.3%	R45G (CGC→GGC)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,266	A→T	6.6%	A43A (GCT→GCA)	PP_0897 ←	class 1 fumarate hydratase
RA	1,039,270	G→C	5.9%	P42R (CCT→CGT)	PP_0897 ←	class 1 fumarate hydratase
RA	1,045,258	T→C	7.0%	intergenic (+31/+75)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,045,262	G→A	7.3%	intergenic (+35/+71)	PP_0905 → / ← PP_0906	hypothetical protein/RND family multidrug transporter
RA	1,053,653	C→G	5.9%	W70C (TGG→TGC)	PP_0911 ←	hypothetical protein
RA	1,067,651	G→A	9.7%	intergenic (+4/‑184)	PP_0925 → / → PP_0926	hypothetical protein/membrane protein
RA	1,070,246:1	+GA	100%	intergenic (+46/+96)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,260	G→C	10.4%	intergenic (+60/+82)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,070,263	G→C	10.7%	intergenic (+63/+79)	aroP‑I → / ← PP_0928	aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein
RA	1,077,154	G→C	5.8%	G178A (GGC→GCC)	mreC →	cell shape‑determining protein MreC
RA	1,077,156	A→G	5.5%	T179A (ACT→GCT)	mreC →	cell shape‑determining protein MreC
RA	1,100,207	G→C	6.9%	V132L (GTG→CTG) ‡	mlaF →	ABC transporter ATP‑binding protein
RA	1,100,208	T→A	8.1%	V132E (GTG→GAG) ‡	mlaF →	ABC transporter ATP‑binding protein
RA	1,100,209	G→C	7.0%	V132V (GTG→GTC) ‡	mlaF →	ABC transporter ATP‑binding protein
RA	1,120,932	G→A	7.1%	V125I (GTT→ATT) ‡	PP_0982 →	YjgP/YjgQ family permease
RA	1,120,933	T→A	7.2%	V125D (GTT→GAT) ‡	PP_0982 →	YjgP/YjgQ family permease
RA	1,120,934	T→C	7.2%	V125V (GTT→GTC) ‡	PP_0982 →	YjgP/YjgQ family permease
RA	1,123,420	A→C	6.6%	noncoding (381/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,421	C→A	6.4%	noncoding (380/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,422	T→A	6.3%	noncoding (379/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,423	T→G	6.3%	noncoding (378/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,123,424	G→T	7.1%	noncoding (377/398 nt)	PP_mr13 ←	cspA regulatory region
RA	1,126,645:1	+C	100%	intergenic (‑99/+50)	tdcG‑II ← / ← gcvP‑I	L‑serine dehydratase/glycine dehydrogenase
RA	1,134,089	A→T	10.2%	intergenic (+34/+44)	PP_0995 → / ← gltS	membrane protein/glutamate:sodium symporter
RA	1,135,613	T→G	13.3%	E454D (GAA→GAC) ‡	PP_0997 ←	sigma‑54 dependent transcriptional regulator/sensory box protein
RA	1,135,614	T→A	13.2%	E454V (GAA→GTA) ‡	PP_0997 ←	sigma‑54 dependent transcriptional regulator/sensory box protein
RA	1,135,615	C→A	13.4%	E454* (GAA→TAA) ‡	PP_0997 ←	sigma‑54 dependent transcriptional regulator/sensory box protein
RA	1,139,414	G→A	5.7%	Y77Y (TAC→TAT)	arcB ←	ornithine carbamoyltransferase
RA	1,156,605	T→G	7.1%	F31L (TTT→TTG)	yihS →	aldose‑ketose isomerase
RA	1,156,608	C→A	6.7%	A32A (GCC→GCA)	yihS →	aldose‑ketose isomerase
RA	1,169,738	G→A	5.3%	Y224Y (TAC→TAT)	leuA ←	2‑isopropylmalate synthase
RA	1,183,364	T→G	6.0%	M341L (ATG→CTG)	mltF ←	membrane‑bound lytic murein transglycosylase F
RA	1,184,588	G→C	10.0%	intergenic (‑204/‑208)	mltF ← / → purL	membrane‑bound lytic murein transglycosylase F/phosphoribosylformylglycinamidine synthase
RA	1,201,587	T→A	7.5%	L132Q (CTG→CAG)	xcpV →	type II secretion pathway protein XcpV
RA	1,202,854	A→C	9.0%	Q228P (CAG→CCG)	xcpY →	type II secretion pathway protein XcpY
RA	1,202,857	G→T	7.6%	R229L (CGG→CTG)	xcpY →	type II secretion pathway protein XcpY
RA	1,211,094	T→C	6.9%	H458R (CAT→CGT)	PP_1060 ←	glutamate synthase large subunit
RA	1,219,149	A→G	9.3%	D229G (GAC→GGC) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,219,150	C→T	9.3%	D229D (GAC→GAT) ‡	PP_1064 →	alpha/beta family hydrolase
RA	1,219,158	T→C	6.8%	L232P (CTG→CCG)	PP_1064 →	alpha/beta family hydrolase
RA	1,225,473	G→T	8.6%	intergenic (‑49/+97)	gltJ ← / ← gltI	glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein
RA	1,225,480	A→C	8.1%	intergenic (‑56/+90)	gltJ ← / ← gltI	glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein
RA	1,225,481	A→T	9.1%	intergenic (‑57/+89)	gltJ ← / ← gltI	glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein
RA	1,225,482	G→T	8.0%	intergenic (‑58/+88)	gltJ ← / ← gltI	glutamate/aspartate ABC transporter permease/glutamate/aspartate ABC transporter substrate‑binding protein
RA	1,226,707	T→A	10.2%	intergenic (‑217/‑114)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,226,710	T→A	10.0%	intergenic (‑220/‑111)	gltI ← / → PP_1072	glutamate/aspartate ABC transporter substrate‑binding protein/leucine‑rich repeat‑containing protein
RA	1,229,483	G→T	7.2%	G888V (GGG→GTG)	PP_1072 →	leucine‑rich repeat‑containing protein
RA	1,233,767	A→C	10.3%	intergenic (‑83/+19)	glpR ← / ← glpK	DNA‑binding transcriptional repressor GlpR/glycerol kinase
RA	1,233,768	T→A	8.8%	intergenic (‑84/+18)	glpR ← / ← glpK	DNA‑binding transcriptional repressor GlpR/glycerol kinase
RA	1,233,769	G→T	9.8%	intergenic (‑85/+17)	glpR ← / ← glpK	DNA‑binding transcriptional repressor GlpR/glycerol kinase
RA	1,235,697	G→T	13.2%	A164A (GCC→GCA)	glpF ←	aquaglyceroporin
RA	1,235,703	C→T	8.9%	L162L (CTG→CTA) ‡	glpF ←	aquaglyceroporin
RA	1,235,704	A→C	8.9%	L162R (CTG→CGG) ‡	glpF ←	aquaglyceroporin
RA	1,235,705	G→T	8.9%	L162M (CTG→ATG) ‡	glpF ←	aquaglyceroporin
RA	1,235,706	A→G	8.9%	I161I (ATT→ATC)	glpF ←	aquaglyceroporin
RA	1,235,712	A→C	8.9%	T159T (ACT→ACG)	glpF ←	aquaglyceroporin
RA	1,248,213	C→A	6.5%	intergenic (+26/+42)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,214	T→C	6.6%	intergenic (+27/+41)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,248,218	T→G	6.9%	intergenic (+31/+37)	argG → / ← PP_1089	argininosuccinate synthase/hypothetical protein
RA	1,267,264	G→C	6.2%	P242A (CCA→GCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,267,271	C→T	7.0%	P239P (CCG→CCA)	quiP ←	acyl‑homoserine lactone acylase QuiP
RA	1,273,533	A→C	7.8%	H14Q (CAT→CAG)	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,536	G→A	6.3%	N13N (AAC→AAT) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,537	T→C	6.4%	N13S (AAC→AGC) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,542	G→A	6.5%	D11D (GAC→GAT) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,543	T→C	6.5%	D11G (GAC→GGC) ‡	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,273,546	G→T	6.5%	P10H (CCT→CAT)	PP_1114 ←	SEC‑C domain‑containing protein
RA	1,277,323	C→A	5.1%	G16V (GGT→GTT) ‡	PP_1116 ←	resolvase family site‑specific recombinase
RA	1,277,324	C→G	5.1%	G16R (GGT→CGT) ‡	PP_1116 ←	resolvase family site‑specific recombinase
RA	1,277,325	T→G	5.5%	Q15H (CAA→CAC)	PP_1116 ←	resolvase family site‑specific recombinase
RA	1,278,482	A→T	8.2%	intergenic (‑309/+254)	PP_5465 ← / ← PP_1117	hypothetical protein/hypothetical protein
RA	1,278,483	A→T	8.0%	intergenic (‑310/+253)	PP_5465 ← / ← PP_1117	hypothetical protein/hypothetical protein
RA	1,278,484	A→T	7.3%	intergenic (‑311/+252)	PP_5465 ← / ← PP_1117	hypothetical protein/hypothetical protein
RA	1,281,191	A→T	8.9%	intergenic (+17/+26)	PP_5742 → / ← PP_1118	membrane protein/recombinase‑like protein
RA	1,281,194	A→T	9.3%	intergenic (+20/+23)	PP_5742 → / ← PP_1118	membrane protein/recombinase‑like protein
RA	1,286,893	C→G	9.1%	A92A (GCC→GCG)	PP_1125 →	putative Helicase
RA	1,286,894	A→G	7.0%	T93A (ACC→GCC)	PP_1125 →	putative Helicase
RA	1,291,462	A→C	9.6%	K85Q (AAG→CAG)	estC →	carboxylesterase
RA	1,291,467	G→T	10.1%	L86L (CTG→CTT)	estC →	carboxylesterase
RA	1,312,319	T→A	5.8%	N780Y (AAC→TAC)	rapA ←	RNA polymerase‑associated protein RapA
RA	1,327,121	C→T	48.5%	intergenic (+97/‑196)	PP_16SE → / → PP_23SE	16S ribosomal RNA/23S ribosomal RNA
RA	1,350,501	T→A	11.9%	K11N (AAA→AAT) ‡	PP_1176 ←	hypothetical protein
RA	1,350,502	T→A	11.9%	K11I (AAA→ATA) ‡	PP_1176 ←	hypothetical protein
RA	1,359,141	T→C	7.5%	intergenic (‑9/+73)	PP_1183 ← / ← PP_1184	siderophore biosynthesis protein/dienelactone hydrolase family protein
RA	1,366,392	A→T	5.4%	F103Y (TTT→TAT) ‡	PP_1191 ←	S4 domain‑containing protein
RA	1,366,393	A→T	5.4%	F103I (TTT→ATT) ‡	PP_1191 ←	S4 domain‑containing protein
RA	1,366,394	A→T	5.2%	H102Q (CAT→CAA)	PP_1191 ←	S4 domain‑containing protein
RA	1,383,254	A→T	18.2%	L16Q (CTG→CAG)	PP_1204 ←	lipoprotein
RA	1,389,946	C→G	5.9%	A23G (GCC→GGC)	PP_1212 →	hypothetical protein
RA	1,389,951	C→G	5.9%	P25A (CCG→GCG)	PP_1212 →	hypothetical protein
RA	1,392,915	T→C	8.1%	intergenic (+85/‑101)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,917	A→G	8.1%	intergenic (+87/‑99)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,919	G→A	8.0%	intergenic (+89/‑97)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,921:1	+A	7.5%	intergenic (+91/‑95)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,927	C→G	9.7%	intergenic (+97/‑89)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,933	Δ1 bp	8.7%	intergenic (+103/‑83)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,936	T→C	8.6%	intergenic (+106/‑80)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,938	C→T	8.8%	intergenic (+108/‑78)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,392,940	G→A	10.3%	intergenic (+110/‑76)	PP_1214 → / → ruvC	transcriptional regulator/crossover junction endodeoxyribonuclease RuvC
RA	1,400,124	A→G	5.8%	S32G (AGC→GGC)	ybgF →	TolQRA transport system periplasmic protein
RA	1,400,129	T→G	5.7%	Y33* (TAT→TAG)	ybgF →	TolQRA transport system periplasmic protein
RA	1,403,590	G→A	9.7%	intergenic (‑56/+25)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,403,591	T→C	9.9%	intergenic (‑57/+24)	PP_1227 ← / ← PP_1228	membrane protein/methyl‑accepting chemotaxis transducer
RA	1,418,249	G→T	5.8%	L236L (CTG→CTT)	purC →	phosphoribosylaminoimidazole‑succinocarboxamide synthase
RA	1,418,251	A→C	5.9%	*237S (TAA→TCA)	purC →	phosphoribosylaminoimidazole‑succinocarboxamide synthase
RA	1,419,548:1	+C	100%	intergenic (‑37/+99)	PP_1242 ← / ← PP_1244	hypothetical protein/hypothetical protein
RA	1,432,875	C→A	6.7%	L319M (CTG→ATG)	xenA →	protein XenA
RA	1,432,878	G→C	7.1%	D320H (GAT→CAT) ‡	xenA →	protein XenA
RA	1,432,880	T→G	7.0%	D320E (GAT→GAG) ‡	xenA →	protein XenA
RA	1,458,117	T→G	15.7%	intergenic (+17/+23)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,119	A→T	14.9%	intergenic (+19/+21)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,458,121	C→A	15.1%	intergenic (+21/+19)	PP_1276 → / ← algA	hypothetical protein/mannose‑6‑phosphate isomerase/mannose‑1‑phosphate guanylyltransferase
RA	1,464,196	G→A	9.4%	T474T (ACC→ACT) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,198	T→A	9.0%	T474S (ACC→TCC) ‡	algX ←	alginate biosynthesis protein AlgX
RA	1,464,200	T→C	9.7%	Q473R (CAG→CGG)	algX ←	alginate biosynthesis protein AlgX
RA	1,470,045	C→G	5.2%	C33S (TGT→TCT)	algK ←	alginate biosynthesis protein AlgK
RA	1,474,995	T→G	9.3%	intergenic (‑775/+26)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,474,996	C→A	9.0%	intergenic (‑776/+25)	algD ← / ← PP_1289	GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein
RA	1,477,382	G→A	9.7%	K12K (AAG→AAA)	PP_1291 →	PhoH family protein
RA	1,477,418	T→C	10.5%	I24I (ATT→ATC)	PP_1291 →	PhoH family protein
RA	1,483,876	A→G	8.3%	intergenic (+21/‑47)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,877	T→G	8.3%	intergenic (+22/‑46)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,878	C→G	8.2%	intergenic (+23/‑45)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,483,879	C→A	7.4%	intergenic (+24/‑44)	yhdW → / → yhdX	amino acid ABC transporter‑binding protein YhdW/amino acid ABC transporter permease
RA	1,499,480	2 bp→AC	100%	intergenic (+57/‑106)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,498	1 bp→CG	100%	intergenic (+75/‑89)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,499,506:1	+C	100%	intergenic (+83/‑81)	trpS → / → zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
RA	1,504,067	T→A	6.4%	intergenic (+34/‑229)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,504,068	T→A	6.3%	intergenic (+35/‑228)	rpsI → / → petA	30S ribosomal protein S9/ubiquinol‑cytochrome c reductase iron‑sulfur subunit
RA	1,506,923	A→G	9.5%	intergenic (+44/‑73)	petC → / → sspA	ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A
RA	1,544,489	C→A	26.1%	intergenic (+48/+66)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,492	G→C	18.9%	intergenic (+51/+63)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,494	C→G	20.1%	intergenic (+53/+61)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,499	C→G	20.1%	intergenic (+58/+56)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,501	G→C	20.1%	intergenic (+60/+54)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,544,504	T→G	14.4%	intergenic (+63/+51)	mdfA → / ← ampG	multidrug MFS transporter/muropeptide permease AmpG
RA	1,555,388	A→C	7.3%	intergenic (+26/+48)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,389	T→A	7.2%	intergenic (+27/+47)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,555,390	G→T	6.8%	intergenic (+28/+46)	sbcB → / ← PP_1366	exodeoxyribonuclease I/transcriptional regulator MvaT
RA	1,560,003	C→G	5.2%	P15P (CCG→CCC)	PP_1370 ←	group 1 family glycosyl transferase
RA	1,568,909	C→T	7.9%	intergenic (+46/‑281)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,568,912	A→G	7.6%	intergenic (+49/‑278)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,568,915	G→A	7.6%	intergenic (+52/‑275)	pcaK → / → pcaF‑I	4‑hydroxybenzoate transporter/beta‑ketoadipyl‑CoA thiolase
RA	1,575,190	A→C	7.1%	intergenic (‑176/+34)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,198	G→A	7.8%	intergenic (‑184/+26)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,200	T→A	7.6%	intergenic (‑186/+24)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,201	T→A	7.2%	intergenic (‑187/+23)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,203	T→C	7.6%	intergenic (‑189/+21)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,575,211	G→T	10.5%	intergenic (‑197/+13)	pcaP ← / ← galP‑II	porin/porin‑like protein
RA	1,578,379	G→A	7.8%	G1006G (GGC→GGT)	ttgB ←	efflux pump membrane protein TtgB
RA	1,580,995	C→A	100%	K134N (AAG→AAT)	ttgB ←	efflux pump membrane protein TtgB
RA	1,601,320	G→C	5.3%	intergenic (‑137/‑50)	bglX ← / → PP_1404	beta‑D‑glucoside glucohydrolase/hypothetical protein
RA	1,606,407	A→T	10.4%	intergenic (‑157/+54)	PP_1407 ← / ← PP_t64	sulfate transporter/tRNA‑Gly
RA	1,606,500	G→C	7.4%	noncoding (35/74 nt)	PP_t64 ←	tRNA‑Gly
RA	1,606,501	G→C	7.4%	noncoding (34/74 nt)	PP_t64 ←	tRNA‑Gly
RA	1,606,502	G→C	7.4%	noncoding (33/74 nt)	PP_t64 ←	tRNA‑Gly
RA	1,606,510	C→A	7.1%	noncoding (25/74 nt)	PP_t64 ←	tRNA‑Gly
RA	1,618,403	T→G	6.2%	M166L (ATG→CTG)	PP_1418 ←	tricarboxylate transport protein TctC
RA	1,618,408	T→G	6.0%	D164A (GAC→GCC) ‡	PP_1418 ←	tricarboxylate transport protein TctC
RA	1,618,409	C→A	5.9%	D164Y (GAC→TAC) ‡	PP_1418 ←	tricarboxylate transport protein TctC
RA	1,618,414	C→A	5.9%	S162I (AGC→ATC)	PP_1418 ←	tricarboxylate transport protein TctC
RA	1,618,418	C→A	7.8%	G161C (GGC→TGC)	PP_1418 ←	tricarboxylate transport protein TctC
RA	1,622,966	T→C	6.1%	S131G (AGC→GGC)	PP_1422 ←	hypothetical protein
RA	1,625,207	G→T	15.6%	intergenic (+30/+27)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,625,208	A→C	17.3%	intergenic (+31/+26)	PP_1425 → / ← nadB	hypothetical protein/L‑aspartate oxidase
RA	1,632,093	C→T	7.9%	P283S (CCT→TCT) ‡	lepA →	elongation factor 4
RA	1,632,095	T→A	7.3%	P283P (CCT→CCA) ‡	lepA →	elongation factor 4
RA	1,632,097	A→G	7.2%	E284G (GAG→GGG)	lepA →	elongation factor 4
RA	1,633,545	T→G	7.1%	V165G (GTC→GGC)	lepB →	signal peptidase I
RA	1,633,552	C→G	6.2%	G167G (GGC→GGG)	lepB →	signal peptidase I
RA	1,633,554	A→T	6.0%	Q168L (CAG→CTG)	lepB →	signal peptidase I
RA	1,633,556	C→G	6.2%	P169A (CCC→GCC)	lepB →	signal peptidase I
RA	1,633,563	C→A	6.0%	A171D (GCC→GAC)	lepB →	signal peptidase I
RA	1,635,754	T→C	7.0%	intergenic (+100/‑70)	era → / → recO	GTPase Era/DNA repair protein RecO
RA	1,635,757	Δ1 bp	7.3%	intergenic (+103/‑67)	era → / → recO	GTPase Era/DNA repair protein RecO
RA	1,637,307	A→G	6.5%	intergenic (+16/+50)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,309	C→T	6.3%	intergenic (+18/+48)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,315	T→C	10.5%	intergenic (+24/+42)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,325	A→T	11.7%	intergenic (+34/+32)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,326	A→T	11.4%	intergenic (+35/+31)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,637,336	G→A	8.9%	intergenic (+45/+21)	pdxJ → / ← PP_1437	pyridoxine 5'‑phosphate synthase/heavy metal sensor histidine kinase
RA	1,639,575	C→T	9.8%	intergenic (‑165/‑146)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,576	G→T	9.9%	intergenic (‑166/‑145)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,580	G→A	9.6%	intergenic (‑170/‑141)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,581	T→C	9.7%	intergenic (‑171/‑140)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,585	A→C	10.7%	intergenic (‑175/‑136)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,586	A→G	10.4%	intergenic (‑176/‑135)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,639,596	C→T	11.0%	intergenic (‑186/‑125)	czcR‑III ← / → PP_1439	response regulator/hypothetical protein
RA	1,642,271	G→C	7.7%	intergenic (‑99/+53)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,277	G→C	6.1%	intergenic (‑105/+47)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,642,285	G→C	6.2%	intergenic (‑113/+39)	PP_1442 ← / ← lon‑I	hypothetical protein/DNA‑binding ATP‑dependent protease
RA	1,647,083	C→A	6.2%	V92L (GTG→TTG)	gcd ←	quinoprotein glucose dehydrogenase
RA	1,647,085	A→T	5.9%	L91Q (CTG→CAG)	gcd ←	quinoprotein glucose dehydrogenase
RA	1,647,087	T→G	7.0%	Q90H (CAA→CAC)	gcd ←	quinoprotein glucose dehydrogenase
RA	1,655,512	G→C	6.1%	L419L (CTC→CTG) ‡	PP_1449 ←	hypothetical protein
RA	1,655,513	A→T	6.2%	L419H (CTC→CAC) ‡	PP_1449 ←	hypothetical protein
RA	1,655,517	T→C	6.2%	I418V (ATC→GTC)	PP_1449 ←	hypothetical protein
RA	1,655,522	A→T	6.1%	L416Q (CTG→CAG) ‡	PP_1449 ←	hypothetical protein
RA	1,655,523	G→C	6.0%	L416V (CTG→GTG) ‡	PP_1449 ←	hypothetical protein
RA	1,667,902	A→G	5.2%	S302G (AGC→GGC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,908	A→C	5.3%	I304L (ATC→CTC)	ffh →	signal recognition particle GTPase subunit
RA	1,667,913	G→T	5.5%	E305D (GAG→GAT)	ffh →	signal recognition particle GTPase subunit
RA	1,682,935	A→G	8.0%	Q485R (CAG→CGG)	recJ →	ssDNA‑specific exonuclease RecJ
RA	1,691,772	T→C	7.0%	intergenic (+39/‑132)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,773	C→G	7.0%	intergenic (+40/‑131)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,783	C→A	14.1%	intergenic (+50/‑121)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,691,786	T→G	13.1%	intergenic (+53/‑118)	PP_1487 → / → PP_1488	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	1,692,531:1	+A	5.8%	coding (628/1623 nt)	PP_1488 →	methyl‑accepting chemotaxis transducer
RA	1,692,534	C→G	5.8%	R211G (CGC→GGC)	PP_1488 →	methyl‑accepting chemotaxis transducer
RA	1,703,248	A→G	23.0%	intergenic (+97/‑70)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,250	G→C	22.0%	intergenic (+99/‑68)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,703,252	C→T	21.5%	intergenic (+101/‑66)	lysS → / → PP_1497	lysine‑‑tRNA ligase/TetR family transcriptional regulator
RA	1,707,227	G→C	7.1%	intergenic (+45/+97)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,707,230	G→C	7.3%	intergenic (+48/+94)	PP_1501 → / ← PP_1502	hypothetical protein/OmpA family protein
RA	1,724,453	T→A	10.2%	intergenic (+20/+29)	PP_1517 → / ← PP_1518	RND family transporter/hypothetical protein
RA	1,724,644	T→A	6.2%	K175N (AAA→AAT)	PP_1518 ←	hypothetical protein
RA	1,731,767	C→T	7.4%	S701S (TCG→TCA)	PP_1526 ←	beta‑(1‑3)‑glucosyl transferase
RA	1,744,887	T→C	9.1%	intergenic (‑13/+328)	PP_1542 ← / ← PP_1543	hypothetical protein/hypothetical protein
RA	1,744,888	T→A	9.0%	intergenic (‑14/+327)	PP_1542 ← / ← PP_1543	hypothetical protein/hypothetical protein
RA	1,744,889	G→A	9.2%	intergenic (‑15/+326)	PP_1542 ← / ← PP_1543	hypothetical protein/hypothetical protein
RA	1,780,750	T→A	8.1%	E198D (GAA→GAT)	dapC ←	N‑succinyl‑L,L‑diaminopimelate aminotransferase
RA	1,799,613	C→A	6.7%	A136E (GCG→GAG)	rnhB →	ribonuclease HII
RA	1,809,176	G→T	10.5%	R76L (CGT→CTT)	eno →	enolase
RA	1,809,179	A→C	11.0%	D77A (GAC→GCC)	eno →	enolase
RA	1,809,182	T→A	11.1%	L78Q (CTG→CAG)	eno →	enolase
RA	1,809,185	T→A	10.6%	L79Q (CTG→CAG)	eno →	enolase
RA	1,809,188	T→A	10.6%	L80Q (CTG→CAG)	eno →	enolase
RA	1,809,191	G→T	9.9%	G81V (GGC→GTC)	eno →	enolase
RA	1,809,194	A→C	10.0%	K82T (AAG→ACG)	eno →	enolase
RA	1,813,400	T→C	10.0%	G293G (GGT→GGC)	frmA →	glutathione‑dependent formaldehyde dehydrogenase
RA	1,813,401	G→A	9.7%	A294T (GCC→ACC)	frmA →	glutathione‑dependent formaldehyde dehydrogenase
RA	1,836,443	T→C	7.0%	intergenic (‑154/‑110)	yohC ← / → ttcA	inner membrane protein/tRNA 2‑thiocytidine(32) synthetase TtcA
RA	1,838,341	Δ1 bp	5.1%	coding (230/414 nt)	PP_1643 ←	membrane protein
RA	1,853,197	A→T	9.5%	intergenic (+42/‑82)	relA → / → mazG	ATP:GTP 3'‑pyrophosphotransferase/modified nucleoside triphosphate pyrophosphohydrolase
RA	1,859,108	C→G	6.1%	intergenic (+28/+73)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,120	C→G	7.6%	intergenic (+40/+61)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,126	T→C	6.2%	intergenic (+46/+55)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,127	T→G	6.2%	intergenic (+47/+54)	PP_1661 → / ← PP_1662	dehydrogenase/hypothetical protein
RA	1,859,527	A→C	6.6%	intergenic (‑119/+37)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,529	T→A	6.6%	intergenic (‑121/+35)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,859,531	G→T	6.6%	intergenic (‑123/+33)	PP_1662 ← / ← PP_1663	hypothetical protein/hypothetical protein
RA	1,870,850	G→A	9.7%	D42N (GAC→AAC)	cobC →	adenosylcobinamide‑phosphate synthase subunit beta
RA	1,884,979	C→T	6.4%	A121V (GCG→GTG)	PP_1692 →	hypothetical protein
RA	1,905,012	C→T	9.6%	P423S (CCC→TCC) ‡	nirB →	nitrite reductase large subunit
RA	1,905,014	C→G	9.6%	P423P (CCC→CCG) ‡	nirB →	nitrite reductase large subunit
RA	1,905,016	A→G	9.3%	D424G (GAC→GGC)	nirB →	nitrite reductase large subunit
RA	1,916,384	T→G	6.2%	intergenic (+86/‑29)	PP_1715 → / → PP_1716	hypothetical protein/Cro/CI family transcriptional regulator
RA	1,916,385	G→C	5.8%	intergenic (+87/‑28)	PP_1715 → / → PP_1716	hypothetical protein/Cro/CI family transcriptional regulator
RA	1,916,386	C→A	5.6%	intergenic (+88/‑27)	PP_1715 → / → PP_1716	hypothetical protein/Cro/CI family transcriptional regulator
RA	1,921,549	T→A	9.3%	intergenic (+24/+37)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,921,550	T→A	11.1%	intergenic (+25/+36)	PP_1720 → / ← PP_1721	alcohol dehydrogenase/phosphoserine phosphatase
RA	1,932,638:1	+C	100%	intergenic (‑105/+45)	rluA ← / ← minE	bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
RA	1,960,867	G→A	9.1%	V231I (GTC→ATC)	PP_1758 →	rhodanese‑like domain‑containing sulfurtransferase
RA	1,967,241	A→G	7.5%	intergenic (+111/+8)	PP_1762 → / ← yciK	hypothetical protein/putative oxidoreductase
RA	1,973,252	T→G	7.0%	I727M (ATT→ATG)	gyrA →	DNA gyrase subunit A
RA	1,975,985	A→G	7.7%	Y306C (TAT→TGT) ‡	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,986	T→A	7.4%	Y306* (TAT→TAA) ‡	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,975,987	C→T	7.0%	Q307* (CAG→TAG)	pheA →	bifunctional chorismate mutase/prephenate dehydratase
RA	1,976,785	T→G	7.6%	F150C (TTC→TGC)	PP_1770 →	3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,976,789	C→G	7.5%	R151R (CGC→CGG)	PP_1770 →	3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,976,793	C→A	10.0%	H153N (CAC→AAC)	PP_1770 →	3‑phosphoshikimate 1‑carboxyvinyltransferase
RA	1,978,708	C→G	7.6%	F45L (TTC→TTG)	cmk →	cytidylate kinase
RA	2,025,706	Δ1 bp	8.5%	coding (706/1110 nt)	wbpZ →	glycosyl transferase
RA	2,025,713	A→C	10.9%	Q238P (CAG→CCG) ‡	wbpZ →	glycosyl transferase
RA	2,025,714	G→T	10.9%	Q238H (CAG→CAT) ‡	wbpZ →	glycosyl transferase
RA	2,025,719:1	+T	11.1%	coding (719/1110 nt)	wbpZ →	glycosyl transferase
RA	2,035,029	T→C	6.1%	intergenic (+845/+596)	pgi‑I → / ← PP_5477	glucose 6‑phosphate isomerase/hypothetical protein
RA	2,039,004	A→G	8.0%	L159S (TTG→TCG)	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,039,008	G→A	7.7%	L158L (CTG→TTG)	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,039,009	G→C	7.7%	N157K (AAC→AAG) ‡	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,039,010	T→C	7.5%	N157S (AAC→AGC) ‡	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,039,014	C→T	7.5%	D156N (GAC→AAC)	rffE ←	UDP‑N‑acetylglucosamine‑2‑epimerase
RA	2,049,303	G→T	11.1%	intergenic (‑32/+28)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,049,304	A→C	11.4%	intergenic (‑33/+27)	PP_1822 ← / ← folEA‑I	hypothetical protein/GTP cyclohydrolase I
RA	2,053,627	T→C	8.3%	intergenic (‑27/+39)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,629	T→A	7.8%	intergenic (‑29/+37)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,630	A→T	7.7%	intergenic (‑30/+36)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,631	T→A	7.7%	intergenic (‑31/+35)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,633	G→A	8.2%	intergenic (‑33/+33)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,053,642	G→A	7.4%	intergenic (‑42/+24)	PP_1828 ← / ← PP_1829	hypothetical protein/alpha/beta family hydrolase
RA	2,054,368	G→A	6.0%	N86N (AAC→AAT)	PP_1829 ←	alpha/beta family hydrolase
RA	2,082,279	A→T	8.8%	intergenic (‑58/+1)	ohrR ← / ← PP_1861	organic hydroperoxide resistance transcriptional regulator/LysR family transcriptional regulator
RA	2,082,281	T→A	7.3%	*318L (TAA→TTA)	PP_1861 ←	LysR family transcriptional regulator
RA	2,082,283	A→T	9.4%	D317E (GAT→GAA)	PP_1861 ←	LysR family transcriptional regulator
RA	2,143,481	C→G	5.8%	T87T (ACC→ACG)	PP_1899 →	ExbD/TolR family protein
RA	2,143,484	G→C	5.5%	L88L (CTG→CTC)	PP_1899 →	ExbD/TolR family protein
RA	2,143,487	C→G	5.2%	S89R (AGC→AGG)	PP_1899 →	ExbD/TolR family protein
RA	2,154,396	C→A	7.7%	G126W (GGG→TGG)	PP_1909 ←	septum formation protein
RA	2,161,003	A→G	6.2%	V247V (GTA→GTG)	pabC →	4‑amino‑4‑deoxychorismate lyase
RA	2,174,134	A→T	6.6%	L210Q (CTG→CAG)	PP_1927 ←	arsenical resistance protein ArsH
RA	2,174,137	A→T	6.7%	L209Q (CTG→CAG)	PP_1927 ←	arsenical resistance protein ArsH
RA	2,211,906	T→G	7.7%	F13C (TTC→TGC) ‡	PP_1955 →	cytochrome P450 family protein
RA	2,211,907	C→A	7.7%	F13L (TTC→TTA) ‡	PP_1955 →	cytochrome P450 family protein
RA	2,211,909	A→G	7.7%	N14S (AAT→AGT)	PP_1955 →	cytochrome P450 family protein
RA	2,224,830	C→T	7.8%	E601E (GAG→GAA) ‡	PP_1963 ←	hypothetical protein
RA	2,224,832	C→G	7.6%	E601Q (GAG→CAG) ‡	PP_1963 ←	hypothetical protein
RA	2,224,834	A→G	7.8%	I600T (ATT→ACT)	PP_1963 ←	hypothetical protein
RA	2,230,781	T→C	8.9%	intergenic (+109/‑3)	PP_1968 → / → PP_1969	TetR family transcriptional regulator/molybdenum cofactor biosynthesis protein A
RA	2,230,783	T→C	8.9%	intergenic (+111/‑1)	PP_1968 → / → PP_1969	TetR family transcriptional regulator/molybdenum cofactor biosynthesis protein A
RA	2,230,786	G→A	8.9%	M1M (ATG→ATA) †	PP_1969 →	molybdenum cofactor biosynthesis protein A
RA	2,230,788	G→A	8.8%	S2N (AGT→AAT)	PP_1969 →	molybdenum cofactor biosynthesis protein A
RA	2,241,300	A→G	9.5%	intergenic (+47/‑234)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,241,304	G→T	10.1%	intergenic (+51/‑230)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,241,306	A→G	11.9%	intergenic (+53/‑228)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,241,311	C→T	14.3%	intergenic (+58/‑223)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,241,313	A→C	10.8%	intergenic (+60/‑221)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,241,314	T→C	10.5%	intergenic (+61/‑220)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,241,326	C→G	9.8%	intergenic (+73/‑208)	gltX → / → PP_t25	glutamate‑‑tRNA ligase/tRNA‑Ala
RA	2,246,996	C→T	6.6%	R868H (CGC→CAC)	PP_1983 ←	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
JC	2,282,749	Δ66 bp	14.7%	intergenic (‑141/+23)	PP_2010 ← / ← PP_2011	cytochrome b561/hypothetical protein
RA	2,284,904	C→T	5.8%	R53C (CGC→TGC)	PP_2013 →	hypothetical protein
RA	2,320,200	C→G	6.0%	L405V (CTG→GTG)	PP_2040 →	MFS transporter
RA	2,333,574	A→G	5.4%	D169G (GAC→GGC)	fadA →	3‑ketoacyl‑CoA thiolase
RA	2,333,578	C→A	5.4%	V170V (GTC→GTA)	fadA →	3‑ketoacyl‑CoA thiolase
RA	2,333,579	T→G	5.4%	Y171D (TAC→GAC)	fadA →	3‑ketoacyl‑CoA thiolase
RA	2,340,703	A→C	6.5%	intergenic (+37/‑78)	dctA‑II → / → yraO	C4‑dicarboxylate transport protein/transporter YraO
RA	2,342,103	T→G	8.6%	intergenic (+18/‑46)	yraO → / → PP_2058	transporter YraO/porin
RA	2,361,719	C→G	7.1%	G720R (GGC→CGC)	PP_2076 ←	hypothetical protein
RA	2,361,724	C→G	7.2%	R718P (CGG→CCG)	PP_2076 ←	hypothetical protein
RA	2,363,695	A→T	5.6%	V61D (GTC→GAC)	PP_2076 ←	hypothetical protein
RA	2,364,098	A→T	6.2%	intergenic (‑222/+111)	PP_2076 ← / ← lysA‑I	hypothetical protein/diaminopimelate decarboxylase
RA	2,364,099	A→T	6.2%	intergenic (‑223/+110)	PP_2076 ← / ← lysA‑I	hypothetical protein/diaminopimelate decarboxylase
RA	2,364,100	A→T	6.2%	intergenic (‑224/+109)	PP_2076 ← / ← lysA‑I	hypothetical protein/diaminopimelate decarboxylase
RA	2,368,284	A→C	7.8%	K368Q (AAG→CAG)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,287	G→T	8.1%	E369* (GAA→TAA) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,288	A→T	8.0%	E369V (GAA→GTA) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,289	A→C	7.2%	E369D (GAA→GAC) ‡	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,368,292	G→T	8.4%	L370L (CTG→CTT)	gdhB →	NAD‑specific glutamate dehydrogenase
RA	2,378,690	A→T	13.8%	N82I (AAT→ATT)	PP_2086 →	CrfX family protein
RA	2,402,301:1	+A	6.9%	coding (66/330 nt)	PP_2103 ←	hypothetical protein
RA	2,402,308	A→T	7.0%	L20Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,402,311	A→T	6.1%	L19Q (CTG→CAG)	PP_2103 ←	hypothetical protein
RA	2,443,500	T→A	5.5%	F6I (TTT→ATT) ‡	PP_2140 →	hypothetical protein
RA	2,443,501	T→A	5.5%	F6Y (TTT→TAT) ‡	PP_2140 →	hypothetical protein
RA	2,444,415	A→C	10.7%	*159G (TGA→GGA)	sulA ←	cell division inhibitor SulA
RA	2,444,419	G→T	9.7%	L157L (CTC→CTA) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,420	A→C	9.7%	L157R (CTC→CGC) ‡	sulA ←	cell division inhibitor SulA
RA	2,444,424	G→T	9.7%	R156S (CGC→AGC)	sulA ←	cell division inhibitor SulA
RA	2,451,601	G→C	11.7%	A20G (GCC→GGC)	PP_2147 ←	hypothetical protein
RA	2,451,800	Δ1 bp	5.5%	coding (3319/3450 nt)	mfd ←	transcription‑repair coupling factor
RA	2,451,807	C→G	5.2%	K1104N (AAG→AAC) ‡	mfd ←	transcription‑repair coupling factor
RA	2,451,808	T→C	5.2%	K1104R (AAG→AGG) ‡	mfd ←	transcription‑repair coupling factor
RA	2,451,812:1	+C	5.4%	coding (3307/3450 nt)	mfd ←	transcription‑repair coupling factor
RA	2,455,455	T→A	8.9%	I57N (ATT→AAT)	gapB →	glyceraldehyde‑3‑phosphate dehydrogenase
RA	2,461,356	C→A	7.4%	P119T (CCC→ACC)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,359	G→T	6.7%	A120S (GCT→TCT) ‡	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,361	T→G	6.6%	A120A (GCT→GCG) ‡	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,365	G→T	7.1%	E122* (GAG→TAG) ‡	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,366	A→C	7.2%	E122A (GAG→GCG) ‡	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,370	C→A	7.1%	R123R (CGC→CGA)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,372	A→C	7.2%	E124A (GAG→GCG)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,461,375	T→G	7.0%	V125G (GTG→GGG)	lolC →	lipoprotein releasing system transmembrane protein LolC
RA	2,483,397	G→A	9.5%	R88H (CGC→CAC)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,400	T→A	9.2%	L89Q (CTG→CAG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,483,403	T→C	10.0%	V90A (GTG→GCG)	puuA‑I →	glutamate‑putrescine ligase
RA	2,519,157	A→G	6.4%	K136K (AAA→AAG)	PP_2212 →	leucine‑rich repeat‑containing protein
RA	2,533,452	C→G	7.3%	R57P (CGT→CCT)	mrpF ←	K(+)/H(+) antiporter subunit F
RA	2,567,595	G→C	9.7%	A111A (GCC→GCG) ‡	PP_2250 ←	LysR family transcriptional regulator
RA	2,567,596	G→A	10.0%	A111V (GCC→GTC) ‡	PP_2250 ←	LysR family transcriptional regulator
RA	2,567,602	A→C	9.3%	L109R (CTG→CGG)	PP_2250 ←	LysR family transcriptional regulator
RA	2,567,605	A→T	9.4%	L108Q (CTG→CAG)	PP_2250 ←	LysR family transcriptional regulator
RA	2,568,693	T→A	7.3%	Q285H (CAA→CAT)	PP_2252 ←	hypothetical protein
RA	2,568,696	T→G	7.4%	E284D (GAA→GAC)	PP_2252 ←	hypothetical protein
RA	2,568,701	C→A	7.2%	V283F (GTC→TTC)	PP_2252 ←	hypothetical protein
RA	2,568,704	T→A	7.2%	M282L (ATG→TTG)	PP_2252 ←	hypothetical protein
RA	2,586,136	G→C	5.5%	intergenic (+42/‑500)	PP_t39 → / → PP_2266	tRNA‑Leu/DNA‑directed RNA polymerase
RA	2,588,798	G→T	6.6%	T721T (ACG→ACT)	PP_2266 →	DNA‑directed RNA polymerase
RA	2,595,176	C→G	6.3%	intergenic (+35/‑106)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,177	C→G	6.6%	intergenic (+36/‑105)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,183	A→C	5.3%	intergenic (+42/‑99)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,184	C→A	5.6%	intergenic (+43/‑98)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,595,188	T→G	5.6%	intergenic (+47/‑94)	PP_5511 → / → PP_2273	hypothetical protein/DNA polymerase I
RA	2,603,228	T→C	9.3%	I62T (ATT→ACT)	PP_5513 →	hypothetical protein
RA	2,623,199	A→G	8.3%	intergenic (+35/‑211)	PP_5517 → / → PP_2295	hypothetical protein/antirestriction protein
RA	2,623,202	C→T	8.4%	intergenic (+38/‑208)	PP_5517 → / → PP_2295	hypothetical protein/antirestriction protein
RA	2,623,478	Δ1 bp	5.7%	coding (69/585 nt)	PP_2295 →	antirestriction protein
RA	2,644,017	G→A	8.1%	L25L (CTG→CTA)	PP_2314 →	hypothetical protein
RA	2,651,276	G→C	6.3%	intergenic (+41/+29)	PP_2323 → / ← aroF‑I	hypothetical protein/tyr‑sensitive phospho‑2‑dehydro‑3‑deoxyheptonate aldolase
RA	2,659,576	Δ1 bp	6.9%	coding (760/1536 nt)	PP_2331 ←	membrane protein
RA	2,669,671	T→G	5.6%	intergenic (+38/+37)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,669,674	C→A	6.0%	intergenic (+41/+34)	prpD → / ← acnB	2‑methylcitrate dehydratase/aconitate hydratase B
RA	2,706,589:1	+A	6.9%	coding (3746/4188 nt)	PP_2369 →	leucine‑rich repeat‑containing protein
RA	2,706,602	Δ1 bp	6.9%	coding (3759/4188 nt)	PP_2369 →	leucine‑rich repeat‑containing protein
RA	2,710,375	G→C	9.1%	K318N (AAG→AAC)	PP_2372 →	sugar‑binding protein
RA	2,710,379	A→T	9.1%	R320W (AGG→TGG)	PP_2372 →	sugar‑binding protein
RA	2,710,383	G→C	7.6%	R321P (CGT→CCT)	PP_2372 →	sugar‑binding protein
RA	2,711,550	G→A	5.8%	A1185V (GCG→GTG)	metH ←	cobalamin‑dependent methionine synthase
RA	2,719,255	Δ1 bp	8.3%	coding (382/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,719,263:1	+T	8.5%	coding (390/585 nt)	nfuA →	Fe/S biogenesis protein NfuA
RA	2,728,639	G→C	7.3%	V123L (GTG→CTG)	PP_2390 →	LysR family transcriptional regulator
RA	2,755,130	A→G	7.1%	M486V (ATG→GTG)	czcA‑II →	cation efflux system protein
RA	2,759,048	A→C	8.3%	L39R (CTG→CGG)	PP_2412 ←	ParA family protein
RA	2,762,976	T→G	8.8%	Q312P (CAG→CCG)	PP_2417 ←	iron ABC transporter permease
RA	2,762,978	G→C	9.2%	G311G (GGC→GGG) ‡	PP_2417 ←	iron ABC transporter permease
RA	2,762,980	C→A	9.2%	G311C (GGC→TGC) ‡	PP_2417 ←	iron ABC transporter permease
RA	2,764,865	G→C	8.4%	A46G (GCC→GGC)	PP_2418 ←	cobalamin ABC transporter substrate‑binding protein
RA	2,786,143	G→T	8.7%	L176I (CTC→ATC)	alx ←	alkaline‑induced transporter
RA	2,793,755	A→C	7.2%	intergenic (+64/+63)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,756	C→A	6.0%	intergenic (+65/+62)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,757	T→G	5.8%	intergenic (+66/+61)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,793,758	G→T	5.9%	intergenic (+67/+60)	PP_2445 → / ← PP_2446	membrane protein/hypothetical protein
RA	2,795,556	Δ1 bp	6.5%	coding (732/1284 nt)	puuB ←	gamma‑glutamylputrescine oxidase
RA	2,796,836	G→T	8.5%	intergenic (+20/‑112)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,796,837	A→T	8.6%	intergenic (+21/‑111)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,796,838	A→T	9.8%	intergenic (+22/‑110)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,796,839	A→C	8.7%	intergenic (+23/‑109)	PP_t43 → / → PP_2449	tRNA‑Val/hypothetical protein
RA	2,799,301	A→G	8.7%	A330A (GCT→GCC) ‡	ansB ←	glutaminase‑asparaginase
RA	2,799,303	C→T	8.7%	A330T (GCT→ACT) ‡	ansB ←	glutaminase‑asparaginase
RA	2,839,286	A→C	9.6%	R79R (CGT→CGG) ‡	ecd ←	flavoprotein
RA	2,839,287	C→G	8.6%	R79P (CGT→CCT) ‡	ecd ←	flavoprotein
RA	2,839,288	G→T	8.1%	R79S (CGT→AGT) ‡	ecd ←	flavoprotein
RA	2,861,136	Δ1 bp	8.6%	coding (196/1086 nt)	gllD ←	4‑oxalomesaconate tautomerase
RA	2,873,639	T→C	12.1%	L140P (CTG→CCG)	cigR →	membrane protein
RA	2,873,647	G→A	13.9%	V143M (GTG→ATG) ‡	cigR →	membrane protein
RA	2,873,648	T→C	14.1%	V143A (GTG→GCG) ‡	cigR →	membrane protein
RA	2,873,656	G→A	9.2%	G146R (GGG→AGG)	cigR →	membrane protein
RA	2,884,556	C→T	7.2%	G7G (GGC→GGT)	PP_2540 →	short‑chain dehydrogenase/reductase family oxidoreductase
RA	2,887,559	G→C	6.3%	L370L (CTC→CTG)	PP_2542 ←	GntR family transcriptional regulator
RA	2,892,458	G→A	5.9%	H104Y (CAC→TAC)	PP_2547 ←	LysR family transcriptional regulator
RA	2,899,236	A→T	8.1%	intergenic (+48/+20)	PP_2552 → / ← PP_2553	DOPA decarboxylase/MFS transporter
RA	2,899,237	A→T	8.1%	intergenic (+49/+19)	PP_2552 → / ← PP_2553	DOPA decarboxylase/MFS transporter
RA	2,899,238	A→T	8.5%	intergenic (+50/+18)	PP_2552 → / ← PP_2553	DOPA decarboxylase/MFS transporter
RA	2,921,460	G→A	100%	G3494R (GGG→AGG)	PP_2561 →	hemolysin‑type calcium‑binding bacteriocin
RA	2,939,267	C→T	34.3%	intergenic (‑213/+227)	PP_2570 ← / ← PP_2572	transposase/hypothetical protein
RA	2,939,274	T→G	29.4%	intergenic (‑220/+220)	PP_2570 ← / ← PP_2572	transposase/hypothetical protein
RA	2,939,275	A→G	29.6%	intergenic (‑221/+219)	PP_2570 ← / ← PP_2572	transposase/hypothetical protein
RA	2,939,276	C→T	29.6%	intergenic (‑222/+218)	PP_2570 ← / ← PP_2572	transposase/hypothetical protein
RA	2,939,277	C→A	29.7%	intergenic (‑223/+217)	PP_2570 ← / ← PP_2572	transposase/hypothetical protein
RA	2,939,284	A→G	26.5%	intergenic (‑230/+210)	PP_2570 ← / ← PP_2572	transposase/hypothetical protein
RA	2,951,334	G→C	17.7%	intergenic (‑113/+48)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,341	A→C	17.1%	intergenic (‑120/+41)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,342	G→T	18.8%	intergenic (‑121/+40)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
RA	2,951,349	G→C	16.4%	intergenic (‑128/+33)	oguA ← / ← PP_2585	8‑oxoguanine deaminase/alpha‑ketoglutaric semialdehyde dehydrogenase
JC	2,957,081	Δ84 bp	18.3%	intergenic (+36/‑77)	PP_2588 → / → PP_2589	class III aminotransferase/aldehyde dehydrogenase family protein
RA	2,957,897	G→C	8.1%	P219P (CCG→CCC)	PP_2589 →	aldehyde dehydrogenase family protein
RA	2,957,904	G→C	8.5%	G222R (GGC→CGC) ‡	PP_2589 →	aldehyde dehydrogenase family protein
RA	2,957,905	G→T	7.9%	G222V (GGC→GTC) ‡	PP_2589 →	aldehyde dehydrogenase family protein
RA	2,957,908	A→C	8.5%	E223A (GAG→GCG) ‡	PP_2589 →	aldehyde dehydrogenase family protein
RA	2,957,909	G→C	8.6%	E223D (GAG→GAC) ‡	PP_2589 →	aldehyde dehydrogenase family protein
JC	2,958,780	Δ61 bp	16.1%	intergenic (+46/+36)	PP_2589 → / ← PP_2590	aldehyde dehydrogenase family protein/ferric siderophore receptor
RA	3,002,524	G→A	6.4%	G189S (GGT→AGT) ‡	PP_2626 →	hypothetical protein
RA	3,002,525	G→C	6.4%	G189A (GGT→GCT) ‡	PP_2626 →	hypothetical protein
RA	3,002,533	G→A	6.9%	E192K (GAG→AAG)	PP_2626 →	hypothetical protein
RA	3,006,468	T→G	6.2%	F1017V (TTC→GTC)	PP_2627 →	membrane protein
RA	3,006,473	G→T	6.0%	L1018L (CTG→CTT)	PP_2627 →	membrane protein
RA	3,006,474	A→C	6.2%	K1019Q (AAG→CAG)	PP_2627 →	membrane protein
RA	3,006,479	C→A	6.4%	D1020E (GAC→GAA)	PP_2627 →	membrane protein
RA	3,010,969	A→C	6.9%	V10V (GTA→GTC)	bcsG →	endoglucanase
RA	3,018,489	A→G	10.0%	I43V (ATC→GTC) ‡	bcsZ →	cellulose synthase endo‑1,4‑D‑glucanase subunit
RA	3,018,491	C→T	10.0%	I43I (ATC→ATT) ‡	bcsZ →	cellulose synthase endo‑1,4‑D‑glucanase subunit
RA	3,024,308	T→A	5.1%	intergenic (+123/+31)	dapA‑II → / ← PP_2640	4‑hydroxy‑tetrahydrodipicolinate synthase/GNAT family acetyltransferase
RA	3,037,406	G→T	10.0%	R61S (CGC→AGC)	PP_2649 ←	LysR family transcriptional regulator
RA	3,037,410	G→C	9.6%	F59L (TTC→TTG)	PP_2649 ←	LysR family transcriptional regulator
RA	3,037,488	T→C	8.3%	A33A (GCA→GCG)	PP_2649 ←	LysR family transcriptional regulator
RA	3,037,496	C→G	8.2%	G31R (GGT→CGT)	PP_2649 ←	LysR family transcriptional regulator
RA	3,037,498	A→T	8.0%	L30H (CTC→CAC)	PP_2649 ←	LysR family transcriptional regulator
RA	3,050,733	G→T	11.7%	A189S (GCA→TCA) ‡	PP_2663 →	hypothetical protein
RA	3,050,734	C→G	11.8%	A189G (GCA→GGA) ‡	PP_2663 →	hypothetical protein
RA	3,050,735	A→C	13.5%	A189A (GCA→GCC) ‡	PP_2663 →	hypothetical protein
RA	3,051,233	T→A	7.4%	I355I (ATT→ATA)	PP_2663 →	hypothetical protein
RA	3,051,838	T→A	7.1%	Y180N (TAC→AAC)	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,844	C→T	7.0%	L182L (CTG→TTG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,051,845	T→A	7.0%	L182Q (CTG→CAG) ‡	PP_2664 →	two‑component system sensor histidine kinase/response regulator
RA	3,092,131	C→G	6.6%	A31G (GCG→GGG)	PP_2701 →	LysR family transcriptional regulator
RA	3,143,433:1	+A	5.9%	coding (357/1539 nt)	rbsA‑II →	ribose ABC transporter ‑ ATP‑binding subunit
RA	3,143,438	A→C	5.4%	E121A (GAG→GCG)	rbsA‑II →	ribose ABC transporter ‑ ATP‑binding subunit
RA	3,146,611	T→C	7.4%	intergenic (+47/+19)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,146,614	G→A	7.3%	intergenic (+50/+16)	PP_2761 → / ← sfnA	ribose ABC transporter permease/acyl‑CoA dehydrogenase/oxidase family protein
RA	3,149,502	A→T	7.0%	N237Y (AAC→TAC)	PP_2765 →	sulfonate monooxygenase MsuD
RA	3,155,364	C→G	11.6%	G300A (GGC→GCC)	PP_2771 ←	sigma‑54 dependent transcriptional regulator
RA	3,158,037	G→T	8.7%	R19L (CGG→CTG)	opuA →	glycine betaine ABC transporter ATP‑binding protein/permease
RA	3,183,328	G→T	7.7%	E330* (GAG→TAG) ‡	PP_2793 →	acyl‑CoA dehydrogenase family protein
RA	3,183,329	A→C	8.0%	E330A (GAG→GCG) ‡	PP_2793 →	acyl‑CoA dehydrogenase family protein
RA	3,189,278	G→C	6.7%	L458V (CTG→GTG)	PP_2799 ←	class III aminotransferase
RA	3,189,279	G→C	6.5%	H457Q (CAC→CAG)	PP_2799 ←	class III aminotransferase
RA	3,199,088	G→A	8.5%	L143L (CTG→TTG)	PP_2806 ←	TetR family transcriptional regulator
RA	3,199,890	C→T	7.1%	L42L (CTC→CTT)	PP_2807 →	hypothetical protein
RA	3,203,150	G→A	6.9%	intergenic (+373/‑100)	PP_2809 → / → PP_2810	membrane protein/hypothetical protein
RA	3,207,241	T→C	6.6%	V297A (GTG→GCG)	PP_2812 →	transporter
RA	3,212,276	T→C	6.7%	*189W (TGA→TGG) ‡	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,278	A→T	7.0%	*189R (TGA→AGA) ‡	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,281	A→T	6.7%	Y188N (TAT→AAT)	PP_2816 ←	transcriptional regulator NfxB
RA	3,212,283	G→A	6.9%	P187L (CCC→CTC)	PP_2816 ←	transcriptional regulator NfxB
RA	3,232,944	G→A	100%	M44I (ATG→ATA)	GbpR →	galactose‑binding protein regulator
RA	3,254,467	T→C	6.5%	Y424C (TAC→TGC)	PP_2852 ←	sulfatase domain‑containing protein
RA	3,254,470	G→C	6.7%	A423G (GCC→GGC)	PP_2852 ←	sulfatase domain‑containing protein
RA	3,254,479	G→A	6.6%	A420V (GCA→GTA)	PP_2852 ←	sulfatase domain‑containing protein
JC	3,261,156	Δ3 bp	5.8%	coding (101‑103/438 nt)	PP_2858 ←	hypothetical protein
RA	3,266,102	T→C	6.4%	intergenic (+19/+40)	PP_2863 → / ← PP_2864	membrane protein/hypothetical protein
RA	3,283,163	T→A	6.6%	Q354H (CAA→CAT)	PP_2885 ←	transporter
RA	3,303,924	T→A	9.1%	V187D (GTC→GAC)	cysS →	cysteine‑‑tRNA ligase
RA	3,304,058	T→C	6.5%	F232L (TTC→CTC)	cysS →	cysteine‑‑tRNA ligase
RA	3,313,825	C→A	5.3%	intergenic (+30/‑129)	hemB → / → proP	5‑aminolevulinate dehydratase/osmosensory proline/betaine/H+ permease
RA	3,330,900	G→T	6.0%	intergenic (‑29/+4)	PP_2928 ← / ← nspC	saccharopine dehydrogenase/carboxynorspermidine/carboxyspermidine decarboxylase
RA	3,330,907	C→A	5.6%	S365S (TCG→TCT)	nspC ←	carboxynorspermidine/carboxyspermidine decarboxylase
RA	3,330,911	A→C	7.4%	L364R (CTG→CGG)	nspC ←	carboxynorspermidine/carboxyspermidine decarboxylase
RA	3,338,476	C→A	7.0%	D175Y (GAC→TAC)	PP_2935 ←	membrane protein
RA	3,340,644	G→A	6.0%	P62S (CCG→TCG)	ybiT ←	ABC‑F family ATPase
RA	3,362,324	G→C	10.4%	D322H (GAT→CAT)	PP_2957 →	acetyltransferase
RA	3,385,250	T→C	8.1%	E56G (GAG→GGG)	PP_2986 ←	oxidoreductase
RA	3,388,806	G→A	8.3%	R291R (CGC→CGT) ‡	PP_2991 ←	hypothetical protein
RA	3,388,807	C→T	8.3%	R291H (CGC→CAC) ‡	PP_2991 ←	hypothetical protein
RA	3,388,818	A→G	8.2%	H287H (CAT→CAC) ‡	PP_2991 ←	hypothetical protein
RA	3,388,819	T→C	8.1%	H287R (CAT→CGT) ‡	PP_2991 ←	hypothetical protein
RA	3,397,546	C→T	9.2%	G9G (GGC→GGT)	PP_3002 →	shikimate dehydrogenase‑like protein
RA	3,398,903	C→G	10.9%	intergenic (+123/‑119)	aroQ‑III → / → PP_3004	type II 3‑dehydroquinate dehydratase/hypothetical protein
RA	3,417,744	T→G	11.2%	E99D (GAA→GAC) ‡	PP_3030 ←	hypothetical protein
RA	3,417,745	T→A	10.6%	E99V (GAA→GTA) ‡	PP_3030 ←	hypothetical protein
RA	3,417,746	C→A	10.8%	E99* (GAA→TAA) ‡	PP_3030 ←	hypothetical protein
RA	3,424,895	C→G	5.7%	intergenic (+483/‑29)	PP_3039 → / → PP_3040	hypothetical protein/holin
RA	3,425,109	G→A	8.5%	M62I (ATG→ATA)	PP_3040 →	holin
RA	3,425,129	T→C	8.3%	M69T (ATG→ACG)	PP_3040 →	holin
RA	3,449,288	C→G	6.1%	D162E (GAC→GAG)	PP_3067 →	hypothetical protein
RA	3,449,295	A→C	7.9%	R165R (AGG→CGG) ‡	PP_3067 →	hypothetical protein
RA	3,449,296	G→C	8.4%	R165T (AGG→ACG) ‡	PP_3067 →	hypothetical protein
RA	3,449,297	G→T	8.4%	R165S (AGG→AGT) ‡	PP_3067 →	hypothetical protein
RA	3,449,304	C→G	8.4%	L168V (CTC→GTC)	PP_3067 →	hypothetical protein
RA	3,453,480	A→G	8.5%	intergenic (‑34/+79)	PP_3069 ← / ← ppiC‑I	outer membrane autotransporter/peptidyl‑prolyl cis‑trans isomerase C
RA	3,453,684	T→A	5.1%	I51F (ATT→TTT)	ppiC‑I ←	peptidyl‑prolyl cis‑trans isomerase C
RA	3,457,559	T→A	6.7%	I378F (ATC→TTC)	bhbP ←	D‑beta‑hydroxybutyrate permease
RA	3,466,055	G→C	8.2%	noncoding (105/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,056	A→T	8.2%	noncoding (104/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,057	A→T	8.2%	noncoding (103/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,058	G→C	8.5%	noncoding (102/119 nt)	PP_mr39 ←	P15 ncRNA
RA	3,466,841	T→G	14.9%	intergenic (‑16/+108)	PP_3081 ← / ← PP_5560	hypothetical protein/hypothetical protein
RA	3,476,725	G→A	5.5%	intergenic (‑13/+155)	PP_3087 ← / ← PP_3088	excinuclease ABC subunit A/hypothetical protein
RA	3,483,006	T→A	5.8%	Q973L (CAG→CTG)	PP_3091 ←	membrane protein
RA	3,491,493	T→C	6.5%	K309R (AAG→AGG)	PP_3096 ←	hypothetical protein
RA	3,491,495	G→C	6.6%	L308L (CTC→CTG)	PP_3096 ←	hypothetical protein
RA	3,513,032	A→G	6.7%	E567G (GAA→GGA)	PP_3108 →	rhs family protein
RA	3,554,459	G→C	7.5%	L25L (CTG→CTC)	PP_3139 →	group 1 family glycosyl transferase
RA	3,554,460	G→C	7.5%	E26Q (GAG→CAG)	PP_3139 →	group 1 family glycosyl transferase
RA	3,571,643	C→T	9.5%	C224C (TGC→TGT)	yneJ →	LysR family DNA‑binding transcriptional regulator
RA	3,573,247	T→C	9.8%	T700A (ACG→GCG)	PP_3155 ←	ferric siderophore receptor
RA	3,573,250	G→A	9.9%	R699C (CGC→TGC)	PP_3155 ←	ferric siderophore receptor
RA	3,590,294	A→T	5.7%	N272I (AAC→ATC)	nicP‑I →	porin‑like protein
RA	3,591,021	G→A	6.4%	A73T (GCC→ACC)	PP_3169 →	membrane protein
RA	3,613,039	G→A	6.6%	G215G (GGC→GGT)	mcoA ←	Mn(II) copper oxidase A
RA	3,644,948	C→T	9.3%	intergenic (‑43/+23)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,644,951	A→G	9.3%	intergenic (‑46/+20)	PP_3211 ← / ← PP_3212	ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein
RA	3,659,906	C→G	7.4%	intergenic (‑41/+34)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,909	T→C	9.0%	intergenic (‑44/+31)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,659,911	C→G	7.3%	intergenic (‑46/+29)	PP_3223 ← / ← PP_3224	ABC transporter substrate‑binding protein/class II aldolase/adducin domain‑containing protein
RA	3,688,371	T→G	5.8%	L163R (CTG→CGG)	PP_3253 →	carboxylate‑amine ligase
RA	3,692,619	T→A	6.2%	Q336L (CAG→CTG)	PP_3259 ←	acyl‑CoA dehydrogenase‑related protein
RA	3,697,084	C→G	6.3%	W135C (TGG→TGC)	PP_5595 ←	hypothetical protein
RA	3,717,745	C→A	7.6%	M18I (ATG→ATT) ‡	paaH ←	3‑hydroxyacyl‑CoA dehydrogenase PaaC
RA	3,717,746	A→T	7.4%	M18K (ATG→AAG) ‡	paaH ←	3‑hydroxyacyl‑CoA dehydrogenase PaaC
RA	3,717,747	T→G	7.3%	M18L (ATG→CTG) ‡	paaH ←	3‑hydroxyacyl‑CoA dehydrogenase PaaC
RA	3,718,088	C→G	9.1%	E169Q (GAG→CAG)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,718,092	C→A	9.2%	L167L (CTG→CTT) ‡	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,718,093	A→T	8.6%	L167Q (CTG→CAG) ‡	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,718,097	T→G	9.6%	M166L (ATG→CTG)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,718,101	C→G	9.8%	L164L (CTG→CTC)	paaG ←	2‑(1,2‑epoxy‑1,2‑dihydrophenyl)acetyl‑CoA isomerase
RA	3,722,495	A→G	6.5%	intergenic (‑41/‑249)	PP_5598 ← / → PP_3288	hypothetical protein/universal stress protein family protein
RA	3,726,082	C→G	6.5%	G245G (GGC→GGG)	PP_3291 →	metallo‑beta‑lactamase family protein
RA	3,757,356	A→G	5.8%	T60A (ACC→GCC)	PP_3321 →	hypothetical protein
RA	3,761,875	C→T	8.6%	A408V (GCC→GTC)	PP_3325 →	ferric siderophore receptor
RA	3,762,865	G→A	5.5%	V36V (GTG→GTA)	PP_3326 →	hypothetical protein
RA	3,762,866	T→C	5.5%	Y37H (TAC→CAC)	PP_3326 →	hypothetical protein
RA	3,770,822	A→C	6.1%	T79P (ACC→CCC)	PP_3331 →	membrane protein
MC JC	3,788,210	Δ115 bp	100%	coding (311‑425/1392 nt)	PP_3350 ←	hypothetical protein
RA	3,796,713	C→T	9.4%	S427S (TCG→TCA)	vdh ←	vanillin dehydrogenase
RA	3,804,019	T→C	9.3%	intergenic (‑103/‑41)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,020	C→G	9.3%	intergenic (‑104/‑40)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,021	C→G	9.3%	intergenic (‑105/‑39)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,804,022	G→A	9.2%	intergenic (‑106/‑38)	PP_3361 ← / → PP_3362	aminotransferase/AsnC family transcriptional regulator
RA	3,845,703:1	+G	100%	intergenic (‑70/+28)	PP_3394 ← / ← PP_3395	3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator
RA	3,848,334	C→G	13.5%	A33A (GCC→GCG)	PP_3397 →	hypothetical protein
RA	3,848,338	T→A	13.3%	F35I (TTC→ATC) ‡	PP_3397 →	hypothetical protein
RA	3,848,339	T→A	13.3%	F35Y (TTC→TAC) ‡	PP_3397 →	hypothetical protein
RA	3,848,343	C→G	13.9%	A36A (GCC→GCG)	PP_3397 →	hypothetical protein
RA	3,872,030	G→T	5.6%	F117L (TTC→TTA) ‡	PP_3420 ←	sensor histidine kinase
RA	3,872,031	A→T	5.5%	F117Y (TTC→TAC) ‡	PP_3420 ←	sensor histidine kinase
RA	3,893,823:1	+G	6.8%	coding (1236/1572 nt)	yegH ←	putative transporter
RA	3,893,826	C→T	6.6%	G411G (GGG→GGA) ‡	yegH ←	putative transporter
RA	3,893,827	C→T	6.6%	G411E (GGG→GAG) ‡	yegH ←	putative transporter
RA	3,893,834	A→C	7.7%	F409V (TTC→GTC)	yegH ←	putative transporter
RA	3,893,835	G→T	6.5%	D408E (GAC→GAA)	yegH ←	putative transporter
RA	3,893,842	A→G	6.2%	F406S (TTC→TCC) ‡	yegH ←	putative transporter
RA	3,893,843	A→G	6.4%	F406L (TTC→CTC) ‡	yegH ←	putative transporter
RA	3,893,846	Δ1 bp	6.2%	coding (1213/1572 nt)	yegH ←	putative transporter
RA	3,896,928	C→T	8.7%	R328H (CGT→CAT)	PP_3440 ←	hypothetical protein
RA	3,903,076	T→G	14.1%	intergenic (+41/+74)	PP_3445 → / ← ilvA‑I	hypothetical protein/threonine deaminase
RA	3,903,077	T→A	11.2%	intergenic (+42/+73)	PP_3445 → / ← ilvA‑I	hypothetical protein/threonine deaminase
RA	3,903,078	C→A	13.9%	intergenic (+43/+72)	PP_3445 → / ← ilvA‑I	hypothetical protein/threonine deaminase
RA	3,911,732	A→T	6.7%	E26D (GAA→GAT)	PP_3452 →	GGDEF domain‑containing protein
RA	3,914,433	G→C	7.3%	R118R (CGC→CGG)	PP_3454 ←	transcriptional regulator
RA	3,915,148	A→C	6.8%	Q39H (CAA→CAC)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,915,149	G→T	6.8%	V40L (GTG→TTG)	PP_3455 →	multidrug RND transporter membrane fusion protein
RA	3,928,379	C→G	10.3%	intergenic (+55/‑85)	peaE → / → PP_3464	phenylacetaldehyde dehydrogenase/hypothetical protein
RA	3,944,814	G→A	7.1%	R49C (CGC→TGC)	PP_3480 ←	hypothetical protein
RA	3,949,791	T→C	8.2%	N416D (AAT→GAT)	PP_3486 ←	cytochrome c
RA	3,951,159	T→C	100%	intergenic (‑123/+72)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,951,161	A→T	100%	intergenic (‑125/+70)	PP_3486 ← / ← PP_3487	cytochrome c/hypothetical protein
RA	3,965,660	T→A	7.9%	intergenic (+66/‑148)	PP_3496 → / → ydcP	endoribonuclease L‑PSP/peptidase
RA	3,965,661	C→G	7.8%	intergenic (+67/‑147)	PP_3496 → / → ydcP	endoribonuclease L‑PSP/peptidase
RA	3,965,662	T→A	7.9%	intergenic (+68/‑146)	PP_3496 → / → ydcP	endoribonuclease L‑PSP/peptidase
RA	3,975,166	A→C	6.3%	intergenic (+87/+20)	PP_3504 → / ← PP_3505	hypothetical protein/hypothetical protein
RA	3,975,167	A→T	6.3%	intergenic (+88/+19)	PP_3504 → / ← PP_3505	hypothetical protein/hypothetical protein
RA	3,975,168	G→T	6.4%	intergenic (+89/+18)	PP_3504 → / ← PP_3505	hypothetical protein/hypothetical protein
RA	3,979,691	T→G	7.7%	M314L (ATG→CTG)	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,980,420	A→G	7.0%	Y71H (TAT→CAT)	cobN ←	aerobic cobaltochelatase subunit CobN
RA	3,980,644	A→T	5.8%	L353Q (CTG→CAG)	cobW ←	adenosylcobalamin biosynthesis protein CobW
RA	3,980,650	T→A	5.7%	Q351L (CAG→CTG)	cobW ←	adenosylcobalamin biosynthesis protein CobW
RA	3,980,656	A→T	5.8%	L349Q (CTG→CAG)	cobW ←	adenosylcobalamin biosynthesis protein CobW
RA	3,984,040	G→T	7.6%	intergenic (+34/+156)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,041	C→T	7.3%	intergenic (+35/+155)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,042	A→G	7.3%	intergenic (+36/+154)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	3,984,043	A→C	7.0%	intergenic (+37/+153)	ilvE → / ← PP_3512	branched‑chain‑amino acid aminotransferase/membrane protein
RA	4,004,143	T→C	10.6%	W37R (TGG→CGG) ‡	PP_3533 →	ornithine cyclodeaminase
RA	4,004,144	G→T	11.5%	W37L (TGG→TTG) ‡	PP_3533 →	ornithine cyclodeaminase
RA	4,004,147	A→C	11.5%	Q38P (CAG→CCG) ‡	PP_3533 →	ornithine cyclodeaminase
RA	4,004,148	G→A	10.8%	Q38Q (CAG→CAA) ‡	PP_3533 →	ornithine cyclodeaminase
RA	4,005,171	G→A	9.7%	G290G (GGC→GGT)	PP_3534 ←	LysR family transcriptional regulator
RA	4,049,910	C→G	9.3%	intergenic (+43/‑58)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,049,913	C→T	9.4%	intergenic (+46/‑55)	quiA → / → oprB‑III	quinate dehydrogenase/carbohydrate‑selective porin
RA	4,050,675	C→T	7.9%	G236G (GGC→GGT)	oprB‑III →	carbohydrate‑selective porin
RA	4,050,679	G→A	7.8%	V238M (GTG→ATG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,050,680	T→C	7.7%	V238A (GTG→GCG) ‡	oprB‑III →	carbohydrate‑selective porin
RA	4,050,684	A→G	7.9%	V239V (GTA→GTG)	oprB‑III →	carbohydrate‑selective porin
RA	4,051,286	T→G	7.3%	Q390P (CAG→CCG)	PP_3571 ←	acetylornithine deacetylase
RA	4,062,315	A→C	5.4%	V675G (GTG→GGG)	PP_3581 ←	membrane protein
RA	4,062,318	G→T	5.4%	P674H (CCC→CAC)	PP_3581 ←	membrane protein
RA	4,080,919	A→T	9.2%	intergenic (‑143/+20)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,080,920	A→T	9.2%	intergenic (‑144/+19)	amaC ← / ← dpkA	D‑lysine aminotransferase/delta 1‑piperideine‑2‑carboxylate reductase
RA	4,107,580	T→C	7.5%	Y41H (TAC→CAC)	PP_3615 →	hypothetical protein
RA	4,142,562	C→G	6.8%	A232G (GCC→GGC)	PP_3646 →	aldehyde dehydrogenase family protein
RA	4,142,565	C→G	6.8%	A233G (GCC→GGC)	PP_3646 →	aldehyde dehydrogenase family protein
RA	4,150,532	C→G	6.6%	I45M (ATC→ATG)	PP_3655 →	cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,150,537	C→A	6.8%	T47N (ACC→AAC)	PP_3655 →	cytosine/purine/uracil/thiamine/allantoin permease family protein
RA	4,163,509	G→A	6.7%	intergenic (‑48/‑134)	pssA ← / → PP_3665	CDP‑diacylglycerol‑‑serine O‑phosphatidyltransferase/AraC family transcriptional regulator
RA	4,170,180	T→G	12.4%	intergenic (‑288/‑99)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,182	A→T	9.5%	intergenic (‑290/‑97)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,183	A→T	9.6%	intergenic (‑291/‑96)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,185	C→A	9.5%	intergenic (‑293/‑94)	katG ← / → PP_3669	catalase‑peroxidase/LysR family transcriptional regulator
RA	4,170,450	C→A	6.9%	R58S (CGC→AGC)	PP_3669 →	LysR family transcriptional regulator
RA	4,173,551	G→A	8.5%	R76R (CGC→CGT)	PP_3672 ←	hypothetical protein
RA	4,188,349	G→T	10.3%	R82L (CGT→CTT) ‡	PP_3684 →	hypothetical protein
RA	4,188,350	T→C	9.4%	R82R (CGT→CGC) ‡	PP_3684 →	hypothetical protein
RA	4,188,351	G→A	9.3%	E83K (GAG→AAG) ‡	PP_3684 →	hypothetical protein
RA	4,188,352	A→C	9.3%	E83A (GAG→GCG) ‡	PP_3684 →	hypothetical protein
RA	4,196,292	G→A	9.7%	intergenic (+134/+235)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,293	G→C	9.8%	intergenic (+135/+234)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,294	T→C	9.8%	intergenic (+136/+233)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,196,302	T→G	9.6%	intergenic (+144/+225)	PP_5618 → / ← PP_5619	Cro/CI family transcriptional regulator/hypothetical protein
RA	4,240,982	C→T	9.8%	G239G (GGG→GGA)	PP_3718 ←	aminotransferase
RA	4,244,977	G→T	6.3%	A15D (GCT→GAT)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,244,983	T→G	6.9%	D13A (GAC→GCC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,244,986	C→A	6.6%	G12V (GGC→GTC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,244,992	A→C	6.8%	I10S (ATC→AGC)	aruH ←	arginine‑‑pyruvate transaminase AruH
RA	4,245,444	G→A	6.5%	Y277Y (TAC→TAT)	alr ←	alanine racemase
RA	4,268,400	C→T	7.5%	G301S (GGC→AGC)	PP_3740 ←	MFS transporter
RA	4,269,254	C→T	9.6%	R16H (CGC→CAC)	PP_3740 ←	MFS transporter
RA	4,277,201	T→C	6.8%	S199S (AGT→AGC)	glcF →	glycolate oxidase iron‑sulfur subunit
RA	4,279,808	C→A	7.0%	A336A (GCC→GCA)	PP_3750 →	GntR family transcriptional regulator
RA	4,279,813	T→G	6.5%	L338R (CTG→CGG)	PP_3750 →	GntR family transcriptional regulator
RA	4,281,125	G→A	6.3%	A100V (GCG→GTG)	PP_3751 ←	cyanate transporter
RA	4,285,296	T→A	6.3%	L234Q (CTG→CAG)	hbd →	3‑hydroxybutyryl‑CoA dehydrogenase
RA	4,301,575	G→C	11.3%	intergenic (+65/‑1235)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,577	G→C	13.5%	intergenic (+67/‑1233)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,301,579	G→C	8.2%	intergenic (+69/‑1231)	PP_3774 → / → PP_5627	hypothetical protein/hypothetical protein
RA	4,321,067	A→G	7.9%	intergenic (‑303/‑115)	PP_3791 ← / → PP_5629	site‑specific recombinase/protease/amidase
RA	4,321,070	C→T	8.4%	intergenic (‑306/‑112)	PP_3791 ← / → PP_5629	site‑specific recombinase/protease/amidase
RA	4,331,119	C→T	7.5%	R189C (CGC→TGC)	PP_3802 →	cation ABC transporter ATP‑binding protein
RA	4,336,541	A→G	12.4%	L225P (CTG→CCG)	PP_3811 ←	LysR family transcriptional regulator
RA	4,337,673	A→T	7.3%	M105L (ATG→TTG)	PP_3812 →	lipase
RA	4,340,075	A→T	19.9%	intergenic (+60/‑271)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,076	G→C	13.3%	intergenic (+61/‑270)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,081	A→G	20.7%	intergenic (+66/‑265)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,082	C→T	14.8%	intergenic (+67/‑264)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,083	A→G	15.7%	intergenic (+68/‑263)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,084	C→T	14.8%	intergenic (+69/‑262)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,089	G→C	17.1%	intergenic (+74/‑257)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,340,090	A→T	14.3%	intergenic (+75/‑256)	ribAB‑II → / → PP_3814	3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein
RA	4,341,848	A→G	7.1%	I161V (ATC→GTC) ‡	PP_3815 →	polyamine ABC transporter permease
RA	4,341,849	T→A	7.2%	I161N (ATC→AAC) ‡	PP_3815 →	polyamine ABC transporter permease
RA	4,341,850	C→T	7.2%	I161I (ATC→ATT) ‡	PP_3815 →	polyamine ABC transporter permease
RA	4,344,302	A→T	10.9%	intergenic (+33/‑123)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,304	C→T	8.8%	intergenic (+35/‑121)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,305	A→G	9.1%	intergenic (+36/‑120)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,310	C→G	9.1%	intergenic (+41/‑115)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,313	C→G	9.1%	intergenic (+44/‑112)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,318	C→T	8.3%	intergenic (+49/‑107)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,319	A→G	8.2%	intergenic (+50/‑106)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,344,321	A→T	8.0%	intergenic (+52/‑104)	PP_3817 → / → PP_3818	polyamine ABC transporter ATP‑binding protein/phosphate‑binding protein
RA	4,348,705	A→G	44.7%	intergenic (‑70/+404)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,349,034	T→G	5.6%	intergenic (‑399/+75)	PP_3820 ← / ← galU	group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
RA	4,353,888	C→T	8.8%	H338H (CAC→CAT)	yrpB →	2‑nitropropane dioxygenase
RA	4,353,889	A→G	8.8%	M339V (ATG→GTG)	yrpB →	2‑nitropropane dioxygenase
RA	4,355,046	Δ1 bp	11.5%	coding (246/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,355,050:1	+C	11.1%	coding (250/681 nt)	modB →	molybdate ABC transporter permease ModB
RA	4,358,599	T→G	5.7%	I453L (ATC→CTC)	PP_3834 ←	hypothetical protein
RA	4,358,601	A→T	5.8%	L452Q (CTG→CAG)	PP_3834 ←	hypothetical protein
RA	4,358,604	A→T	5.8%	L451Q (CTG→CAG)	PP_3834 ←	hypothetical protein
RA	4,358,606	C→A	5.8%	E450D (GAG→GAT)	PP_3834 ←	hypothetical protein
RA	4,361,786	C→G	7.4%	intergenic (+21/‑84)	PP_t45 → / → yphA	tRNA‑Leu/inner membrane protein
RA	4,361,788	C→G	7.3%	intergenic (+23/‑82)	PP_t45 → / → yphA	tRNA‑Leu/inner membrane protein
RA	4,361,789	G→A	7.2%	intergenic (+24/‑81)	PP_t45 → / → yphA	tRNA‑Leu/inner membrane protein
RA	4,361,790	C→G	7.3%	intergenic (+25/‑80)	PP_t45 → / → yphA	tRNA‑Leu/inner membrane protein
RA	4,371,052	G→T	7.7%	G249V (GGC→GTC)	PP_3847 →	LuxR family transcriptional regulator
RA	4,375,433	C→T	6.6%	A35T (GCC→ACC)	PP_5637 ←	hypothetical protein
RA	4,375,442	C→A	10.9%	A32S (GCG→TCG)	PP_5637 ←	hypothetical protein
RA	4,375,444	A→T	10.4%	V31D (GTC→GAC)	PP_5637 ←	hypothetical protein
RA	4,375,446	T→G	11.3%	R30R (CGA→CGC)	PP_5637 ←	hypothetical protein
RA	4,382,821	G→A	9.1%	intergenic (‑32/+230)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,382,822	T→C	8.5%	intergenic (‑33/+229)	PP_3857 ← / ← PP_3858	hypothetical protein/tail fiber protein
RA	4,399,517	G→A	6.6%	L125F (CTC→TTC)	PP_3878 ←	minor capsid protein C
RA	4,399,522	A→T	7.1%	I123N (ATT→AAT)	PP_3878 ←	minor capsid protein C
RA	4,399,527	T→C	6.6%	E121E (GAA→GAG)	PP_3878 ←	minor capsid protein C
RA	4,409,528	Δ1 bp	8.0%	coding (786/1398 nt)	PP_3893 ←	DNA helicase
RA	4,426,685	C→T	8.8%	P107S (CCG→TCG)	PP_3920 →	putative Phage integrase
RA	4,426,692	A→G	9.2%	D109G (GAC→GGC)	PP_3920 →	putative Phage integrase
RA	4,431,270	T→G	6.1%	L347W (TTG→TGG) ‡	PP_3925 →	hypothetical protein
RA	4,431,271	G→C	6.0%	L347F (TTG→TTC) ‡	PP_3925 →	hypothetical protein
RA	4,431,272	C→A	6.0%	Q348K (CAG→AAG)	PP_3925 →	hypothetical protein
RA	4,451,355	A→C	6.3%	D320A (GAC→GCC)	nicB →	nicotinate dehydrogenase subunit B
RA	4,461,502	Δ1 bp	5.1%	intergenic (+17/‑11)	PP_3954 → / → PP_3955	substrate‑binding protein/permease
RA	4,488,991	A→G	8.8%	intergenic (+344/+227)	PP_3981 → / ← PP_3982	transposase/hypothetical protein
RA	4,488,992	C→G	8.8%	intergenic (+345/+226)	PP_3981 → / ← PP_3982	transposase/hypothetical protein
RA	4,488,993	C→T	8.7%	intergenic (+346/+225)	PP_3981 → / ← PP_3982	transposase/hypothetical protein
RA	4,498,482	T→C	7.0%	I508V (ATC→GTC)	PP_3988 ←	hypothetical protein
RA	4,503,789	C→T	13.1%	intergenic (+38/‑60)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,503,790	A→G	12.8%	intergenic (+39/‑59)	xanP → / → tusD	xanthine permease/sulfur transfer protein complex subunit TusD
RA	4,508,402	A→T	9.5%	S127T (TCC→ACC)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,405	C→T	9.4%	V126I (GTT→ATT)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,406	A→C	9.4%	A125A (GCT→GCG)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,409	G→T	9.1%	I124I (ATC→ATA) ‡	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,410	A→G	9.2%	I124T (ATC→ACC) ‡	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,508,413	A→T	8.9%	V123E (GTA→GAA)	cysG ←	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
RA	4,560,566	T→C	6.4%	Y328C (TAT→TGT)	PP_4048 ←	hypothetical protein
RA	4,561,243	G→C	7.0%	I102M (ATC→ATG)	PP_4048 ←	hypothetical protein
RA	4,566,737	G→T	7.9%	A136S (GCG→TCG)	treZ →	malto‑oligosyltrehalose trehalohydrolase
RA	4,566,744	A→C	8.8%	E138A (GAG→GCG)	treZ →	malto‑oligosyltrehalose trehalohydrolase
RA	4,568,498	A→T	7.0%	E143V (GAA→GTA)	malQ →	4‑alpha‑glucanotransferase
RA	4,568,619	C→G	12.2%	A183A (GCC→GCG)	malQ →	4‑alpha‑glucanotransferase
RA	4,573,161	C→G	7.3%	P85R (CCC→CGC)	PP_4054 →	hypothetical protein
RA	4,575,038	A→G	6.5%	Q570Q (CAA→CAG)	glgX →	glycogen debranching enzyme
RA	4,575,039	G→C	6.4%	E571Q (GAG→CAG)	glgX →	glycogen debranching enzyme
RA	4,575,044	G→C	6.8%	L572L (CTG→CTC)	glgX →	glycogen debranching enzyme
RA	4,575,045	C→T	6.7%	L573L (CTG→TTG)	glgX →	glycogen debranching enzyme
RA	4,577,020	G→A	7.5%	A102A (GCG→GCA)	PP_4057 →	membrane protein
RA	4,583,273	G→A	6.0%	A52V (GCC→GTC)	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,583,275	G→T	6.1%	I51I (ATC→ATA)	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,583,280	A→C	6.2%	Y50D (TAT→GAT)	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,583,282	T→C	5.9%	D49G (GAC→GGC)	treSB ←	bifunctional trehalose synthase B/maltokinase
RA	4,586,030	2 bp→TC	100%	intergenic (+113/+101)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,033:1	+G	100%	intergenic (+116/+99)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,586,056:1	+C	100%	intergenic (+139/+76)	PP_4061 → / ← PP_4063	hypothetical protein/long‑chain fatty acid‑‑CoA ligase
RA	4,587,695	G→T	7.0%	R40R (CGC→CGA) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,697	G→C	6.9%	R40G (CGC→GGC) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,698	G→C	6.9%	S39S (TCC→TCG) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,587,700	A→C	6.7%	S39A (TCC→GCC) ‡	PP_4063 ←	long‑chain fatty acid‑‑CoA ligase
RA	4,599,290	G→C	11.4%	L173L (CTC→CTG)	PP_4071 ←	membrane protein
RA	4,672,933	C→A	5.3%	V26L (GTG→TTG)	PP_4136 ←	LuxR family transcriptional regulator
RA	4,672,934	T→G	5.3%	Q25H (CAA→CAC)	PP_4136 ←	LuxR family transcriptional regulator
RA	4,674,896	G→C	5.4%	L556L (CTG→CTC)	PP_4137 →	outer membrane siderophore receptor
RA	4,681,789:1	+C	5.7%	coding (79/1431 nt)	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,795	T→A	5.6%	L29M (TTG→ATG) ‡	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,681,796	T→A	5.9%	L29* (TTG→TAG) ‡	mltD →	membrane‑bound lytic murein transglycosylase D
RA	4,701,319	C→T	6.0%	A26T (GCG→ACG)	kdpC ←	potassium‑transporting ATPase subunit C
RA	4,720,490	G→A	6.0%	V199V (GTG→GTA)	PP_4177 →	hypothetical protein
RA	4,733,446	T→C	100%	Y730C (TAT→TGT)	sucA ←	2‑oxoglutarate dehydrogenase subunit E1
RA	4,740,805	Δ1 bp	100%	intergenic (+42/+711)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,816	T→G	100%	intergenic (+53/+700)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,819	2 bp→CT	100%	intergenic (+56/+696)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,740,844	C→G	6.8%	intergenic (+81/+672)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,229	A→C	100%	intergenic (+466/+287)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,231	C→G	100%	intergenic (+468/+285)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,234	C→T	100%	intergenic (+471/+282)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,236	2 bp→TG	100%	intergenic (+473/+279)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,239	A→G	100%	intergenic (+476/+277)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,243	3 bp→TGC	100%	intergenic (+480/+271)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,255	C→T	100%	intergenic (+492/+261)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,257	A→C	100%	intergenic (+494/+259)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,260	2 bp→GC	100%	intergenic (+497/+255)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,263	A→C	100%	intergenic (+500/+253)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,272	A→G	100%	intergenic (+509/+244)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,274	A→C	100%	intergenic (+511/+242)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,276	G→C	100%	intergenic (+513/+240)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,278	C→T	100%	intergenic (+515/+238)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,283:1	+T	100%	intergenic (+520/+233)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,289	C→G	100%	intergenic (+526/+227)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,292	C→T	100%	intergenic (+529/+224)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,294	C→G	100%	intergenic (+531/+222)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,296	A→C	100%	intergenic (+533/+220)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,741,298	C→T	100%	intergenic (+535/+218)	gltA → / ← yeiW	citrate synthase/putative oxidoreductase
RA	4,744,600	A→C	6.7%	S76A (TCC→GCC)	PP_4198 ←	OmpA family protein
RA	4,744,607	G→T	6.4%	G73G (GGC→GGA)	PP_4198 ←	OmpA family protein
RA	4,758,424	C→G	8.1%	V454L (GTG→CTG)	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,758,425	G→T	7.9%	V453V (GTC→GTA) ‡	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,758,426	A→C	8.3%	V453G (GTC→GGC) ‡	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,758,427	C→G	8.2%	V453L (GTC→CTC) ‡	pvdP ←	pyoverdine biosynthesis‑like protein
RA	4,776,087	T→C	5.9%	Q1060Q (CAA→CAG) ‡	pvdD ←	non‑ribosomal peptide synthetase
RA	4,776,088	T→A	5.9%	Q1060L (CAA→CTA) ‡	pvdD ←	non‑ribosomal peptide synthetase
RA	4,796,612	C→T	11.7%	intergenic (‑170/+48)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,614	G→C	11.8%	intergenic (‑172/+46)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,617	G→C	9.5%	intergenic (‑175/+43)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,619	A→G	9.9%	intergenic (‑177/+41)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,796,627	C→T	11.3%	intergenic (‑185/+33)	pvdH ← / ← PP_4224	diaminobutyrate‑2‑oxoglutarate transaminase/sensor histidine kinase
RA	4,804,608	G→A	7.3%	R154C (CGC→TGC)	PP_4233 ←	oxidoreductase small subunit
RA	4,812,183	C→T	6.2%	intergenic (+103/‑290)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,184	A→T	6.2%	intergenic (+104/‑289)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,812,185	A→G	6.1%	intergenic (+105/‑288)	PP_4238 → / → PP_5665	hypothetical protein/McbA family microcin B17‑like processing protein
RA	4,850,158	C→T	9.2%	intergenic (+75/‑112)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,159	C→G	9.2%	intergenic (+76/‑111)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,850,160	A→G	8.9%	intergenic (+77/‑110)	hemN → / → fnrA	oxygen‑independent coproporphyrinogen III dehydrogenase/DNA‑binding transcriptional dual regulator
RA	4,875,109	G→A	100%	M99I (ATG→ATA)	PP_4284 →	transporter
RA	4,896,329	T→C	6.3%	C262R (TGT→CGT)	PP_4304 →	VIC family cation transporter
RA	4,896,377	C→T	8.6%	intergenic (+10/‑198)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,896,445	G→A	7.8%	intergenic (+78/‑130)	PP_4304 → / → sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
RA	4,897,264	A→T	5.8%	E230D (GAA→GAT)	sbp‑I →	sulfate ABC transporter substrate‑binding protein
RA	4,904,885	G→T	5.7%	intergenic (‑52/+183)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,904,888	T→A	6.5%	intergenic (‑55/+180)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,904,890	G→C	6.5%	intergenic (‑57/+178)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,904,892	T→A	6.7%	intergenic (‑59/+176)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,904,895	A→C	6.8%	intergenic (‑62/+173)	PP_4312 ← / ← PP_4313	hypothetical protein/peptidylprolyl isomerase
RA	4,922,995	A→T	7.7%	I88N (ATC→AAC)	PP_4332 ←	chemotaxis protein CheW
RA	4,950,972	T→G	18.8%	intergenic (‑122/+35)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,950,973	C→A	18.8%	intergenic (‑123/+34)	fliL ← / ← fliK	flagellar protein FliL/flagellar hook‑length control protein FliK
RA	4,980,354	T→G	6.6%	intergenic (‑145/+16)	flgF ← / ← PP_4387	flagellar basal‑body rod protein FlgF/hypothetical protein
JC	4,980,585	+GGC	100%	intergenic (‑24/+44)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE
RA	4,985,847:1	+C	9.2%	coding (89/753 nt)	flgA →	flagella basal body P‑ring formation protein
RA	4,985,851	G→C	9.5%	T31T (ACG→ACC)	flgA →	flagella basal body P‑ring formation protein
RA	4,985,854	Δ1 bp	9.7%	coding (96/753 nt)	flgA →	flagella basal body P‑ring formation protein
RA	4,986,592	A→T	6.0%	intergenic (+81/‑84)	flgA → / → flgM	flagella basal body P‑ring formation protein/flagellin biosynthesis negative regulator FlgM
RA	4,986,712	T→C	7.3%	S13P (TCC→CCC)	flgM →	flagellin biosynthesis negative regulator FlgM
RA	4,986,717	C→G	6.9%	V14V (GTC→GTG)	flgM →	flagellin biosynthesis negative regulator FlgM
RA	4,997,604	T→G	7.5%	Q166P (CAG→CCG)	PP_4405 ←	sensory box protein
RA	5,038,518:1	+A	9.8%	coding (64/255 nt)	PP_4444 →	transposase
RA	5,038,524	Δ1 bp	9.7%	coding (70/255 nt)	PP_4444 →	transposase
RA	5,079,126	T→A	6.7%	intergenic (‑371/+26)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,079,129	T→A	7.1%	intergenic (‑374/+23)	mgtE ← / ← PP_t56	magnesium transporter/tRNA‑Arg
RA	5,080,643	G→A	7.0%	A299V (GCG→GTG) ‡	lysC ←	aspartokinase
RA	5,080,644	C→G	7.0%	A299P (GCG→CCG) ‡	lysC ←	aspartokinase
RA	5,080,651	C→G	6.9%	Q296H (CAG→CAC)	lysC ←	aspartokinase
RA	5,082,883	G→T	6.9%	A461A (GCC→GCA) ‡	alaS ←	alanine‑‑tRNA ligase
RA	5,082,884	G→A	7.0%	A461V (GCC→GTC) ‡	alaS ←	alanine‑‑tRNA ligase
RA	5,082,887	T→A	6.9%	D460V (GAC→GTC)	alaS ←	alanine‑‑tRNA ligase
RA	5,082,890	T→C	6.9%	Y459C (TAC→TGC) ‡	alaS ←	alanine‑‑tRNA ligase
RA	5,082,891	A→C	7.7%	Y459D (TAC→GAC) ‡	alaS ←	alanine‑‑tRNA ligase
RA	5,087,625	A→G	6.1%	D395D (GAT→GAC)	astD ←	N‑succinylglutamate 5‑semialdehyde dehydrogenase
RA	5,096,464	A→G	9.4%	V101A (GTC→GCC) ‡	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,096,465	C→T	9.4%	V101I (GTC→ATC) ‡	argT ←	lysine/arginine/ornithine ABC transporter substrate‑binding protein
RA	5,100,038	A→G	8.3%	intergenic (+124/+29)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,100,039	A→T	8.3%	intergenic (+125/+28)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,100,040	C→T	8.2%	intergenic (+126/+27)	PP_4488 → / ← phhR	hypothetical protein/sigma‑54 dependent transcriptional regulator
RA	5,105,663	T→C	8.6%	S817G (AGC→GGC)	ydiJ ←	putative oxidoreductase
RA	5,105,668	G→A	8.3%	P815L (CCG→CTG)	ydiJ ←	putative oxidoreductase
RA	5,118,195	T→G	6.7%	intergenic (+27/‑32)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,118,196	C→T	6.7%	intergenic (+28/‑31)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,118,197	A→G	6.6%	intergenic (+29/‑30)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,118,198	C→A	6.7%	intergenic (+30/‑29)	PP_4504 → / → PP_4505	hypothetical protein/sensor histidine kinase
RA	5,131,860	C→A	6.5%	L72M (CTG→ATG) ‡	PP_4517 →	hypothetical protein
RA	5,131,861	T→G	6.5%	L72R (CTG→CGG) ‡	PP_4517 →	hypothetical protein
RA	5,134,986	T→A	8.8%	intergenic (‑47/+18)	PP_4520 ← / ← PP_4521	hypothetical protein/aerotaxis receptor
RA	5,137,665	A→G	8.6%	intergenic (‑64/‑149)	PP_4522 ← / → PP_4523	LysR family transcriptional regulator/agmatinase
RA	5,137,670	C→T	8.5%	intergenic (‑69/‑144)	PP_4522 ← / → PP_4523	LysR family transcriptional regulator/agmatinase
RA	5,138,824	G→T	5.3%	intergenic (+48/‑85)	PP_4523 → / → PP_4524	agmatinase/sodium‑solute symporter
RA	5,156,328	A→G	6.7%	S263G (AGC→GGC)	PP_4539 →	LysR family transcriptional regulator
RA	5,156,331	C→T	6.9%	R264C (CGC→TGC)	PP_4539 →	LysR family transcriptional regulator
RA	5,169,170	T→C	8.9%	M263T (ATG→ACG)	PP_4547 →	glutamine synthetase
RA	5,172,240	A→C	8.2%	R240R (CGT→CGG) ‡	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,241	C→G	9.4%	R240P (CGT→CCT) ‡	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,172,242	G→T	8.4%	R240S (CGT→AGT) ‡	fadD‑I ←	long‑chain‑fatty acid‑‑CoA ligase
RA	5,175,328	A→G	5.2%	Y44C (TAC→TGC) ‡	PP_4551 →	alpha/beta family hydrolase
RA	5,175,329	C→G	5.1%	Y44* (TAC→TAG) ‡	PP_4551 →	alpha/beta family hydrolase
RA	5,177,663	T→A	6.0%	I108F (ATC→TTC)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,177,664	C→G	6.0%	L107L (CTG→CTC)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,177,671	A→T	5.7%	L105Q (CTG→CAG)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,177,677	T→A	6.5%	D103V (GAC→GTC)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,177,679	A→G	5.6%	D102D (GAT→GAC)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,177,686	A→T	5.6%	L100Q (CTG→CAG)	PP_4553 ←	ECF family RNA polymerase sigma‑70 factor
RA	5,182,992	A→T	14.9%	F248I (TTC→ATC)	PP_4563 ←	hypothetical protein
RA	5,182,997	T→A	14.2%	K246M (AAG→ATG) ‡	PP_4563 ←	hypothetical protein
RA	5,182,998	T→A	14.3%	K246* (AAG→TAG) ‡	PP_4563 ←	hypothetical protein
RA	5,183,003	A→T	14.7%	I244N (ATC→AAC)	PP_4563 ←	hypothetical protein
RA	5,199,645	G→C	9.4%	intergenic (+20/+53)	PP_4579 → / ← PP_4580	LysR family transcriptional regulator/hypothetical protein
RA	5,201,830	C→T	6.8%	A46V (GCC→GTC)	PP_4583 →	putative Peptidase
RA	5,201,833	A→G	6.8%	D47G (GAC→GGC)	PP_4583 →	putative Peptidase
RA	5,221,099	T→C	7.0%	H75H (CAT→CAC)	PP_4601 →	LysR family transcriptional regulator
RA	5,239,884	G→A	8.5%	A144V (GCG→GTG)	ldh ←	leucine dehydrogenase
RA	5,239,889	T→C	8.6%	P142P (CCA→CCG)	ldh ←	leucine dehydrogenase
RA	5,244,142	A→G	5.2%	W114R (TGG→CGG)	hmgA ←	homogentisate 1,2‑dioxygenase
RA	5,269,314	A→T	6.6%	L342H (CTC→CAC) ‡	radA ←	DNA repair enzyme
RA	5,269,315	G→C	6.4%	L342V (CTC→GTC) ‡	radA ←	DNA repair enzyme
RA	5,284,431	G→A	6.4%	R279H (CGT→CAT)	PP_4658 →	methyl‑accepting chemotaxis protein
RA	5,289,372	T→G	6.1%	I39S (ATC→AGC)	PP_4662 →	hypothetical protein
RA	5,291,548	C→T	6.1%	D41D (GAC→GAT)	PP_4665 →	hypothetical protein
RA	5,304,592	G→A	7.4%	P887L (CCC→CTC)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,304,595	T→C	8.1%	E886G (GAG→GGG)	recC ←	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
RA	5,322,365	T→A	7.0%	E296V (GAG→GTG)	mrcB ←	transglycosylase/transpeptidase
RA	5,336,179	G→A	6.7%	R870H (CGC→CAC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,336,185	C→G	8.7%	A872G (GCC→GGC)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,336,191	T→C	8.2%	V874A (GTG→GCG)	PP_4695 →	two‑component system sensor histidine kinase
RA	5,340,369	C→G	6.2%	A73G (GCG→GGG)	folK →	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
RA	5,340,377	G→C	6.0%	A76P (GCC→CCC) ‡	folK →	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
RA	5,340,378	C→G	6.1%	A76G (GCC→GGC) ‡	folK →	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine diphosphokinase
RA	5,341,586	G→C	5.6%	V231V (GTG→GTC)	panB →	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	5,341,588	A→C	5.7%	K232T (AAG→ACG)	panB →	3‑methyl‑2‑oxobutanoate hydroxymethyltransferase
RA	5,342,597	T→C	9.8%	intergenic (+43/‑164)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,342,601	G→A	10.0%	intergenic (+47/‑160)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,342,604	C→G	9.3%	intergenic (+50/‑157)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,342,607	T→A	9.6%	intergenic (+53/‑154)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,342,608	T→A	10.2%	intergenic (+54/‑153)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,342,611	C→G	10.4%	intergenic (+57/‑150)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,342,614	T→C	10.7%	intergenic (+60/‑147)	panC → / → pgi‑II	pantothenate synthetase/glucose 6‑phosphate isomerase
RA	5,351,342	A→C	9.4%	intergenic (+21/+55)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,351,345	G→T	9.5%	intergenic (+24/+52)	PP_4706 → / ← PP_4707	hypothetical protein/OsmY‑like protein
RA	5,356,515	T→G	6.0%	E749A (GAG→GCG)	infB ←	translation initiation factor IF‑2
RA	5,356,518	C→A	6.2%	R748L (CGC→CTC)	infB ←	translation initiation factor IF‑2
RA	5,361,071	A→T	12.9%	intergenic (‑78/+23)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,361,072	A→T	12.9%	intergenic (‑79/+22)	PP_t49 ← / ← PP_t48	tRNA‑Met/tRNA‑Leu
RA	5,363,063	G→T	7.8%	L235I (CTC→ATC)	glmM ←	phosphoglucosamine mutase
RA	5,363,064	A→C	6.5%	D234E (GAT→GAG)	glmM ←	phosphoglucosamine mutase
RA	5,364,420	C→G	8.8%	G72R (GGT→CGT)	folP ←	dihydropteroate synthase
RA	5,364,421	C→G	8.8%	P71P (CCG→CCC) ‡	folP ←	dihydropteroate synthase
RA	5,364,423	G→T	8.2%	P71T (CCG→ACG) ‡	folP ←	dihydropteroate synthase
RA	5,380,163	G→T	5.9%	intergenic (+74/+34)	recN → / ← fur	DNA repair/recombination protein/ferric iron uptake global transcriptional repressor Fur
RA	5,380,164	A→C	6.9%	intergenic (+75/+33)	recN → / ← fur	DNA repair/recombination protein/ferric iron uptake global transcriptional repressor Fur
RA	5,380,165	A→G	5.8%	intergenic (+76/+32)	recN → / ← fur	DNA repair/recombination protein/ferric iron uptake global transcriptional repressor Fur
RA	5,388,877	T→G	5.6%	L796R (CTG→CGG)	dld2 →	D‑lactate dehydrogenase
RA	5,388,883	T→G	5.2%	L798R (CTG→CGG)	dld2 →	D‑lactate dehydrogenase
RA	5,407,046	T→G	6.7%	N124T (AAC→ACC)	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,050	G→T	7.3%	R123S (CGC→AGC)	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,051	C→G	7.3%	L122L (CTG→CTC) ‡	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,052	A→C	8.5%	L122R (CTG→CGG) ‡	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,407,056	C→A	9.7%	V121L (GTG→TTG)	PP_4751 ←	amino acid ABC transporter ATP‑binding protein
RA	5,426,086	G→C	9.7%	G208R (GGC→CGC)	PP_4765 →	hypothetical protein
RA	5,426,090	G→C	9.1%	W209S (TGG→TCG) ‡	PP_4765 →	hypothetical protein
RA	5,426,091	G→C	9.0%	W209C (TGG→TGC) ‡	PP_4765 →	hypothetical protein
RA	5,426,095	G→C	8.9%	A211P (GCG→CCG)	PP_4765 →	hypothetical protein
RA	5,428,786	G→T	6.3%	S98* (TCG→TAG)	yedA ←	phenylalanine/threonine exporter
RA	5,429,250	G→A	6.6%	R194C (CGC→TGC)	PP_4768 ←	exonuclease
RA	5,439,309	G→A	7.0%	P16L (CCT→CTT)	rluE ←	23S rRNA pseudouridine(2457) synthase
RA	5,443,315	G→C	6.4%	P489A (CCG→GCG)	PP_4781 ←	sensor histidine kinase
RA	5,443,321	C→G	6.3%	A487P (GCG→CCG)	PP_4781 ←	sensor histidine kinase
RA	5,443,322	C→G	6.1%	R486R (CGG→CGC)	PP_4781 ←	sensor histidine kinase
RA	5,458,892:1	+A	8.7%	intergenic (+17/‑45)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,458,898	Δ1 bp	9.2%	intergenic (+23/‑39)	leuS → / → PP_4795	leucine‑‑tRNA ligase/lipoprotein
RA	5,463,400	T→A	8.7%	intergenic (‑51/+48)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,463,401	T→A	8.7%	intergenic (‑52/+47)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,463,407	Δ1 bp	9.1%	intergenic (‑58/+41)	PP_4799 ← / ← lipA	muramoyltetrapeptide carboxypeptidase/lipoyl synthase
RA	5,464,942	A→T	7.7%	L59Q (CTG→CAG)	lipB ←	octanoyltransferase
RA	5,464,945	A→T	7.7%	L58Q (CTG→CAG)	lipB ←	octanoyltransferase
RA	5,487,749	G→A	7.4%	V360M (GTG→ATG) ‡	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,487,750	T→C	7.4%	V360A (GTG→GCG) ‡	PP_4824 →	two‑component system sensor histidine kinase/response regulator
RA	5,489,780	A→C	6.1%	M88L (ATG→CTG) ‡	PP_4825 →	MarC family membrane protein
RA	5,489,781	T→A	6.2%	M88K (ATG→AAG) ‡	PP_4825 →	MarC family membrane protein
RA	5,489,782	G→T	6.2%	M88I (ATG→ATT) ‡	PP_4825 →	MarC family membrane protein
RA	5,491,442	C→A	5.4%	W8L (TGG→TTG)	PP_5715 ←	hypothetical protein
RA	5,491,492	C→G	5.1%	intergenic (‑28/+24)	PP_5715 ← / ← PP_5716	hypothetical protein/hypothetical protein
RA	5,508,225	A→G	10.5%	intergenic (+79/‑171)	cycA → / → urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein
RA	5,508,226	C→G	10.2%	intergenic (+80/‑170)	cycA → / → urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein
RA	5,508,227	C→T	10.6%	intergenic (+81/‑169)	cycA → / → urtA	D‑alanine/beta‑alanine/D‑serine/glycine permease/urea ABC transporter substrate‑binding protein
RA	5,517,787	A→G	8.0%	I265T (ATC→ACC)	PP_4850 ←	membrane protein
RA	5,517,791	C→T	8.0%	V264M (GTG→ATG)	PP_4850 ←	membrane protein
RA	5,519,915	A→T	14.3%	intergenic (‑186/‑40)	PP_4852 ← / → PP_4853	AraC family transcriptional regulator/DMT superfamily permease
RA	5,519,916	A→T	14.3%	intergenic (‑187/‑39)	PP_4852 ← / → PP_4853	AraC family transcriptional regulator/DMT superfamily permease
RA	5,519,917	A→T	15.4%	intergenic (‑188/‑38)	PP_4852 ← / → PP_4853	AraC family transcriptional regulator/DMT superfamily permease
RA	5,522,791	T→A	6.0%	intergenic (+25/+15)	PP_4856 → / ← yhjG	Dps family ferritin/protein YhjG
RA	5,525,770	C→A	9.1%	intergenic (+60/‑63)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,525,773	T→G	7.9%	intergenic (+63/‑60)	PP_4858 → / → PP_4859	hypothetical protein/TetR family transcriptional regulator
RA	5,537,058	A→G	11.8%	intergenic (+35/+68)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,067	A→G	14.7%	intergenic (+44/+59)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,537,075	G→C	17.9%	intergenic (+52/+51)	nadE → / ← PP_4870	NH(3)‑dependent NAD(+) synthetase/azurin
RA	5,538,381	A→G	8.1%	E153E (GAA→GAG)	PP_4871 →	lysine decarboxylase family protein
RA	5,539,279	C→G	6.2%	K569N (AAG→AAC)	PP_4872 ←	hypothetical protein
RA	5,549,605	T→A	12.0%	intergenic (+18/‑154)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,549,606	T→A	10.9%	intergenic (+19/‑153)	PP_t47 → / → PP_4881	tRNA‑Leu/iron ABC transporter substrate‑binding protein
RA	5,550,768	T→C	6.0%	L337P (CTC→CCC)	PP_4881 →	iron ABC transporter substrate‑binding protein
JC	5,555,608	+GCC	100%	intergenic (‑84/+87)	PP_4887 ← / ← PP_4888	hypothetical protein/methyl‑accepting chemotaxis transducer
RA	5,570,177	T→G	8.2%	A24A (GCA→GCC) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,178	G→C	7.1%	A24G (GCA→GGA) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,570,179	C→A	6.6%	A24S (GCA→TCA) ‡	nnrD ←	ADP‑dependent (S)‑NAD(P)H‑hydrate dehydratase
RA	5,582,813	T→A	10.1%	H178L (CAC→CTC)	PP_4911 ←	hypothetical protein
RA	5,582,816	T→A	10.1%	Q177L (CAG→CTG)	PP_4911 ←	hypothetical protein
RA	5,582,819	T→A	10.2%	Q176L (CAG→CTG)	PP_4911 ←	hypothetical protein
RA	5,582,822	T→A	10.2%	E175V (GAG→GTG)	PP_4911 ←	hypothetical protein
RA	5,606,901	A→C	9.2%	L413W (TTG→TGG)	cyaB ←	cyclolysin secretion/processing ATP‑binding protein CyaB
RA	5,608,293:1	+A	6.4%	intergenic (‑155/+33)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,608,294	T→A	6.2%	intergenic (‑156/+32)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,608,307	T→A	7.0%	intergenic (‑169/+19)	cyaB ← / ← waaA	cyclolysin secretion/processing ATP‑binding protein CyaB/3‑deoxy‑D‑manno‑octulosonic acid transferase
RA	5,611,237	C→G	5.7%	R77R (CGC→CGG)	PP_4931 →	hypothetical protein
RA	5,612,015	C→G	8.1%	R337G (CGC→GGC) ‡	PP_4931 →	hypothetical protein
RA	5,612,016	G→C	7.7%	R337P (CGC→CCC) ‡	PP_4931 →	hypothetical protein
RA	5,612,017	C→G	7.8%	R337R (CGC→CGG) ‡	PP_4931 →	hypothetical protein
RA	5,614,703	A→C	9.3%	I273M (ATT→ATG)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,614,706	G→T	8.0%	A272A (GCC→GCA)	hldE ←	bifunctional heptose 7‑phosphate kinase/heptose 1‑phosphate adenylyltransferase
RA	5,625,964	C→T	7.2%	R513H (CGC→CAC)	PP_4944 ←	carbamoyltransferase
RA	5,633,932	C→T	9.6%	A1154A (GCC→GCT)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,633,935	G→A	9.7%	A1155A (GCG→GCA)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,633,937	T→A	9.8%	L1156Q (CTG→CAG)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,633,939	T→C	9.9%	C1157R (TGC→CGC)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,633,942	A→G	9.8%	S1158G (AGC→GGC)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,633,948	T→G	5.4%	F1160V (TTC→GTC)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,633,950:1	+G	5.7%	coding (3480/3954 nt)	putA →	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
RA	5,634,457	T→G	6.5%	intergenic (+33/+350)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,634,458	C→A	6.2%	intergenic (+34/+349)	putA → / ← PP_5718	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase/membrane protein
RA	5,636,018	T→C	6.0%	L129P (CTG→CCG)	PP_4948 →	acyl‑CoA dehydrogenase family protein
RA	5,641,455	C→G	11.5%	S373C (TCC→TGC)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,641,460	C→G	11.6%	Q375E (CAG→GAG)	PP_4951 →	EmrB/QacA family drug resistance transporter
RA	5,648,209	G→C	7.3%	intergenic (+16/+8)	elaA → / ← PP_4957	acetyltransferase/hypothetical protein
RA	5,648,981	C→G	6.0%	A29P (GCG→CCG)	ygjP ←	metal‑dependent hydrolase
RA	5,648,982	C→G	5.2%	Q28H (CAG→CAC)	ygjP ←	metal‑dependent hydrolase
RA	5,651,374	T→G	7.9%	intergenic (‑182/+31)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,651,377	C→A	5.8%	intergenic (‑185/+28)	PP_4959 ← / ← fba	diguanylate cyclase/fructose‑bisphosphate aldolase
RA	5,655,155	T→A	10.9%	S131C (AGC→TGC)	epd ←	D‑erythrose 4‑phosphate dehydrogenase
RA	5,655,157	G→C	10.9%	A130G (GCC→GGC)	epd ←	D‑erythrose 4‑phosphate dehydrogenase
RA	5,655,631	T→G	8.4%	intergenic (‑86/+66)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,636	C→A	10.2%	intergenic (‑91/+61)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,655,641	Δ1 bp	8.9%	intergenic (‑96/+56)	epd ← / ← tktA	D‑erythrose 4‑phosphate dehydrogenase/transketolase A
RA	5,658,116	T→G	8.6%	H57Q (CAT→CAG)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,122	C→T	8.8%	L59L (CTC→CTT)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,123	A→G	8.8%	K60E (AAG→GAG)	sahR →	methionine metabolism transcriptional regulator
RA	5,658,129	C→A	10.8%	L62M (CTG→ATG)	sahR →	methionine metabolism transcriptional regulator
RA	5,660,182	G→T	6.3%	intergenic (+35/‑194)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,660,185	A→C	5.7%	intergenic (+38/‑191)	metK → / → ligB	methionine adenosyltransferase/DNA ligase B
RA	5,670,453	G→A	10.9%	intergenic (+42/‑43)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,457	A→T	11.1%	intergenic (+46/‑39)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,458	T→A	11.1%	intergenic (+47/‑38)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,459	A→T	11.1%	intergenic (+48/‑37)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,670,463	T→C	10.9%	intergenic (+52/‑33)	metF → / → PP_4978	5,10‑methylenetetrahydrofolate reductase/hypothetical protein
RA	5,674,750:1	+G	100%	intergenic (+112/+28)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,674,753	G→C	100%	intergenic (+115/+25)	rhlE‑II → / ← yceI	ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor
RA	5,679,138	A→G	7.7%	D255G (GAC→GGC)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
RA	5,679,142	G→T	7.5%	E256D (GAG→GAT)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
RA	5,679,143	A→C	7.5%	I257L (ATC→CTC)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
RA	5,679,147	C→T	7.1%	A258V (GCC→GTC)	bioA →	adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA
JC	5,681,415	+CGGG	100%	intergenic (‑133/+71)	PP_4986 ← / ← PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
RA	5,688,515	Δ1 bp	7.0%	coding (451/2061 nt)	pilJ ←	twitching motility protein PilJ
RA	5,688,520	T→A	8.3%	Q149L (CAG→CTG)	pilJ ←	twitching motility protein PilJ
RA	5,688,523:1	+G	8.3%	coding (443/2061 nt)	pilJ ←	twitching motility protein PilJ
RA	5,692,104	C→G	6.4%	S160W (TCG→TGG) ‡	PP_4994 →	hypothetical protein
RA	5,692,105	G→C	6.5%	S160S (TCG→TCC) ‡	PP_4994 →	hypothetical protein
RA	5,706,587	T→A	6.9%	L202Q (CTG→CAG)	PP_5009 →	hypothetical protein
RA	5,725,646	T→G	6.3%	K440N (AAA→AAC)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,725,652	C→G	6.5%	P438P (CCG→CCC)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,725,658	C→A	6.6%	P436P (CCG→CCT)	opgH ←	glucans biosynthesis glucosyltransferase H
RA	5,728,840	A→G	8.7%	intergenic (‑203/+121)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,728,843	A→T	8.6%	intergenic (‑206/+118)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,728,844	A→T	8.7%	intergenic (‑207/+117)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,728,847	C→T	8.8%	intergenic (‑210/+114)	opgG ← / ← dtd	glucans biosynthesis protein G/D‑tyrosyl‑tRNA(Tyr) deacylase
RA	5,740,457	G→A	20.5%	intergenic (+22/+49)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,467	T→G	34.8%	intergenic (+32/+39)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,470	A→T	27.0%	intergenic (+35/+36)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,471	A→T	29.4%	intergenic (+36/+35)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,740,474	C→A	25.4%	intergenic (+39/+32)	hutF → / ← PP_5037	formiminoglutamate deiminase/lipocalin family lipoprotein
RA	5,743,349	A→G	10.2%	intergenic (‑182/+65)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,350	C→T	9.9%	intergenic (‑183/+64)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,351	A→C	10.0%	intergenic (‑184/+63)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,352	G→T	10.8%	intergenic (‑185/+62)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,360	C→T	16.2%	intergenic (‑193/+54)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,362	T→C	15.8%	intergenic (‑195/+52)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,363	G→A	16.0%	intergenic (‑196/+51)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,365	A→G	15.9%	intergenic (‑198/+49)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,373	A→C	13.3%	intergenic (‑206/+41)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,743,375	A→G	11.3%	intergenic (‑208/+39)	fbp ← / ← glgP	class 1 fructose‑1,6‑bisphosphatase/glycogen phosphorylase
RA	5,747,318	A→G	6.2%	L219P (CTG→CCG)	PP_5043 ←	PhoPQ‑activated pathogenicity‑like protein
RA	5,762,502	G→A	11.5%	intergenic (+18/‑123)	gpmI → / → PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
RA	5,762,503	T→A	11.3%	intergenic (+19/‑122)	gpmI → / → PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
RA	5,762,504	T→C	11.3%	intergenic (+20/‑121)	gpmI → / → PP_5057	2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase
RA	5,767,352	T→G	5.3%	M1174L (ATG→CTG)	PP_5060 ←	hypothetical protein
RA	5,772,157	A→C	5.0%	I269S (ATC→AGC)	betT‑I ←	choline transporter
RA	5,790,143	A→T	12.1%	intergenic (+22/+46)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,150	A→G	10.2%	intergenic (+29/+39)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,151	C→G	10.4%	intergenic (+30/+38)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,152	C→T	10.3%	intergenic (+31/+37)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,159	A→T	9.5%	intergenic (+38/+30)	ynfM → / ← PP_5073	efflux transporter/hypothetical protein
RA	5,790,620	A→T	7.3%	intergenic (‑24/+33)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,790,625	A→T	7.6%	intergenic (‑29/+28)	PP_5073 ← / ← hemE	hypothetical protein/uroporphyrinogen decarboxylase
RA	5,793,157	G→A	6.5%	C58C (TGC→TGT)	gltD ←	glutamate synthase subunit beta
RA	5,803,831	A→G	8.8%	F167S (TTT→TCT)	pilN ←	type IV pili biogenesis protein PilN
RA	5,815,531	C→T	8.9%	intergenic (+15/+76)	PP_5090 → / ← PP_5091	cell division protein/membrane protein
RA	5,844,774	G→C	8.3%	V466L (GTG→CTG) ‡	PP_5122 →	GMC family oxidoreductase
RA	5,844,775	T→A	7.1%	V466E (GTG→GAG) ‡	PP_5122 →	GMC family oxidoreductase
RA	5,844,776	G→C	7.1%	V466V (GTG→GTC) ‡	PP_5122 →	GMC family oxidoreductase
RA	5,847,533	T→C	6.1%	K59E (AAG→GAG)	PP_5126 ←	HDOD domain‑containing protein
RA	5,849,046	C→T	11.3%	intergenic (+21/‑250)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,047	C→G	9.7%	intergenic (+22/‑249)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,849,048	A→G	9.6%	intergenic (+23/‑248)	rlmI → / → ilvD	ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase
RA	5,866,696	G→T	7.9%	intergenic (+19/+38)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,866,697	A→C	7.8%	intergenic (+20/+37)	PP_5140 → / ← thyA	MerR family transcriptional regulator/thymidylate synthase
RA	5,874,819	G→T	7.0%	S451* (TCG→TAG) ‡	ilvA‑II ←	threonine deaminase
RA	5,874,820	A→C	6.2%	S451A (TCG→GCG) ‡	ilvA‑II ←	threonine deaminase
RA	5,877,824	C→T	8.0%	V54V (GTG→GTA)	PP_5151 ←	hypothetical protein
RA	5,903,164	G→T	15.0%	intergenic (‑128/‑140)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,903,165	A→C	13.7%	intergenic (‑129/‑139)	PP_5175 ← / → PP_5176	HlyD family secretion protein/hypothetical protein
RA	5,909,296	A→T	6.4%	intergenic (‑76/+93)	spuD ← / ← spuC‑II	spermidine/putrescine ABC transporter substrate‑binding protein/polyamine:pyruvate transaminase
RA	5,914,111	G→A	10.3%	intergenic (+3/+150)	spuI → / ← argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
RA	5,917,153	A→G	6.1%	K71E (AAG→GAG)	ygiF →	thiamine triphosphatase
RA	5,934,056	G→T	6.1%	intergenic (‑80/‑66)	PP_5201 ← / → PP_5721	hypothetical protein/hypothetical protein
RA	5,944,535	C→T	11.1%	intergenic (‑301/+39)	PP_5211 ← / ← PP_5212	ChaC‑related protein/iron‑sulfur‑binding oxidoreductase
RA	5,944,536	A→T	11.1%	intergenic (‑302/+38)	PP_5211 ← / ← PP_5212	ChaC‑related protein/iron‑sulfur‑binding oxidoreductase
RA	5,944,537	A→G	12.3%	intergenic (‑303/+37)	PP_5211 ← / ← PP_5212	ChaC‑related protein/iron‑sulfur‑binding oxidoreductase
RA	5,961,628	T→A	7.4%	I175N (ATT→AAT)	lysA‑II →	diaminopimelate decarboxylase
RA	5,961,631	C→G	8.0%	A176G (GCC→GGC)	lysA‑II →	diaminopimelate decarboxylase
RA	5,963,846	T→G	5.6%	Y216D (TAT→GAT)	PP_5229 →	hypothetical protein
RA	5,966,125	A→T	6.8%	intergenic (‑194/+236)	PP_5232 ← / ← amtB	hypothetical protein/ammonium transporter AmtB
RA	5,970,525	A→G	6.0%	W257R (TGG→CGG)	PP_5236 ←	hypothetical protein
RA	5,970,526	G→C	6.8%	R256R (CGC→CGG) ‡	PP_5236 ←	hypothetical protein
RA	5,970,527	C→T	6.0%	R256H (CGC→CAC) ‡	PP_5236 ←	hypothetical protein
RA	5,974,648	C→A	5.7%	intergenic (+960/‑133)	PP_5726 → / → PP_5727	hypothetical protein/hypothetical protein
RA	5,979,975	T→A	8.2%	L207* (TTA→TAA)	PP_5242 →	GAF domain‑containing sensor histidine kinase
RA	5,986,841	T→A	100%	intergenic (+121/‑78)	PP_5245 → / → kefB‑III	AraC family transcriptional regulator/glutathione‑regulated potassium/H+ antiporter
RA	5,988,809	G→A	19.7%	intergenic (+103/‑443)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,819	T→C	19.7%	intergenic (+113/‑433)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,824	C→T	19.4%	intergenic (+118/‑428)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,825	G→T	19.4%	intergenic (+119/‑427)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,826	C→T	19.4%	intergenic (+120/‑426)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,829	A→G	19.4%	intergenic (+123/‑423)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,835	G→C	21.4%	intergenic (+129/‑417)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,837	C→G	21.4%	intergenic (+131/‑415)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,840	C→T	21.4%	intergenic (+134/‑412)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,844	C→G	21.4%	intergenic (+138/‑408)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,848	C→T	20.0%	intergenic (+142/‑404)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,850	C→T	20.6%	intergenic (+144/‑402)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,889	C→A	13.8%	intergenic (+183/‑363)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,894	C→T	13.3%	intergenic (+188/‑358)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,895	A→G	13.3%	intergenic (+189/‑357)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,905	T→C	16.0%	intergenic (+199/‑347)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,988,911	Δ1 bp	15.3%	intergenic (+205/‑341)	kefB‑III → / → PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
RA	5,997,189:1	+G	11.5%	intergenic (‑158/+42)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	5,997,194	Δ1 bp	11.9%	intergenic (‑163/+37)	PP_5252 ← / ← PP_5253	hypothetical protein/arylesterase
RA	6,001,228	G→T	7.7%	P358Q (CCG→CAG)	amaA ←	L‑pipecolate oxidase
RA	6,001,230	C→T	7.8%	E357E (GAG→GAA)	amaA ←	L‑pipecolate oxidase
RA	6,001,235	A→G	8.1%	F356L (TTC→CTC)	amaA ←	L‑pipecolate oxidase
RA	6,001,237	A→C	8.0%	L355R (CTG→CGG)	amaA ←	L‑pipecolate oxidase
RA	6,007,759	Δ1 bp	6.6%	coding (45/1389 nt)	norM →	multidrug resistance protein NorM
RA	6,013,836	G→A	10.0%	intergenic (+41/+69)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,838	A→G	9.9%	intergenic (+43/+67)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,845	G→C	9.3%	intergenic (+50/+60)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,846	T→G	22.8%	intergenic (+51/+59)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,852	A→G	8.7%	intergenic (+57/+53)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,854	G→C	10.0%	intergenic (+59/+51)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,863	T→C	8.0%	intergenic (+68/+42)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,013,885	T→C	100%	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
RA	6,025,835	T→A	7.7%	L236H (CTC→CAC)	PP_5276 →	phospholipase D family protein
RA	6,071,883	C→G	6.0%	L214F (TTG→TTC)	pstB‑II ←	phosphate ABC transporter ATP‑binding protein
RA	6,073,443	T→C	7.8%	P271P (CCA→CCG) ‡	PP_5327 ←	phosphate ABC transporter permease
RA	6,073,444	G→A	8.1%	P271L (CCA→CTA) ‡	PP_5327 ←	phosphate ABC transporter permease
RA	6,073,447	T→C	8.0%	Q270R (CAG→CGG) ‡	PP_5327 ←	phosphate ABC transporter permease
RA	6,073,448	G→A	7.9%	Q270* (CAG→TAG) ‡	PP_5327 ←	phosphate ABC transporter permease
RA	6,077,118	T→A	10.7%	E194V (GAA→GTA)	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,077,123	C→A	10.0%	K192N (AAG→AAT) ‡	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,077,124	T→A	11.5%	K192M (AAG→ATG) ‡	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,077,125	T→G	10.2%	K192Q (AAG→CAG) ‡	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,077,130	T→A	9.7%	Y190F (TAC→TTC)	PP_5329 ←	phosphate ABC transporter substrate‑binding protein
RA	6,078,420	A→C	10.9%	L269R (CTG→CGG) ‡	PP_5330 ←	MFS transporter
RA	6,078,421	G→T	10.0%	L269M (CTG→ATG) ‡	PP_5330 ←	MFS transporter
RA	6,080,988	T→A	17.0%	intergenic (+35/+27)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,080,989	T→A	17.1%	intergenic (+36/+26)	PP_5332 → / ← PP_5333	hypothetical protein/hypothetical protein
RA	6,083,590	A→C	5.9%	intergenic (‑55/+213)	purE ← / ← PP_5337	5‑(carboxyamino)imidazole ribonucleotide mutase/LysR family transcriptional regulator
RA	6,083,595	G→C	5.1%	intergenic (‑60/+208)	purE ← / ← PP_5337	5‑(carboxyamino)imidazole ribonucleotide mutase/LysR family transcriptional regulator
RA	6,083,599	G→T	5.1%	intergenic (‑64/+204)	purE ← / ← PP_5337	5‑(carboxyamino)imidazole ribonucleotide mutase/LysR family transcriptional regulator
RA	6,089,214	T→C	6.2%	Y131Y (TAT→TAC)	potF‑IV →	putrescine‑binding protein
RA	6,089,217	G→A	6.1%	M132I (ATG→ATA)	potF‑IV →	putrescine‑binding protein
RA	6,090,799	G→A	6.9%	Q230* (CAG→TAG)	PP_5342 ←	GntR family transcriptional regulator
RA	6,110,033	T→A	5.2%	D91V (GAT→GTT)	PP_5360 ←	hypothetical protein
RA	6,111,977	T→A	7.1%	H118Q (CAT→CAA)	PP_5362 →	hypothetical protein
RA	6,152,624	C→T	8.4%	R69* (CGA→TGA) ‡	PP_5738 →	hypothetical protein
RA	6,152,625	G→C	8.5%	R69P (CGA→CCA) ‡	PP_5738 →	hypothetical protein
RA	6,152,626	A→G	8.5%	R69R (CGA→CGG) ‡	PP_5738 →	hypothetical protein
RA	6,158,981	C→T	7.1%	intergenic (+318/+550)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,983	C→G	6.9%	intergenic (+320/+548)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,984	T→A	6.8%	intergenic (+321/+547)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,985	C→G	8.0%	intergenic (+322/+546)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,158,987	A→G	6.7%	intergenic (+324/+544)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,159,260	C→T	5.2%	intergenic (+597/+271)	PP_5739 → / ← PP_5402	hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
RA	6,167,904	A→T	5.3%	P328P (CCA→CCT)	PP_5407 →	TnsD‑like transposition protein

Unassigned new junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 52028	56 (0.950)	4 (0.070)	3/248	NT	6.8%	intergenic (‑39/‑366)	czcC‑I/opdT‑I	cobalt‑zinc‑cadmium resistance protein/tyrosine‑specific outer membrane porin D
	?	NC_002947	= 52046	56 (1.000)					intergenic (‑57/‑348)	czcC‑I/opdT‑I	cobalt‑zinc‑cadmium resistance protein/tyrosine‑specific outer membrane porin D
*	?	NC_002947	69470 =	45 (0.760)	3 (0.050)	3/248	NT	6.0%	coding (377/528 nt)	gmhB	D‑glycero‑beta‑D‑manno‑heptose‑1,7‑bisphosphate 7‑phosphatase
	?	NC_002947	69519 =	52 (0.930)					coding (328/528 nt)	gmhB	D‑glycero‑beta‑D‑manno‑heptose‑1,7‑bisphosphate 7‑phosphatase
*	?	NC_002947	= 71181	50 (0.850)	3 (0.050)	3/250	NT	5.8%	coding (724/2055 nt)	glyS	glycine‑tRNA ligase subunit beta
	?	NC_002947	= 71208	49 (0.870)					coding (697/2055 nt)	glyS	glycine‑tRNA ligase subunit beta
*	?	NC_002947	= 174906	NA (NA)	6 (0.110)	5/252	NT	NA	noncoding (1704/2902 nt)	PP_23SA	23S ribosomal RNA
	?	NC_002947	= 174936	NA (NA)					noncoding (1734/2902 nt)	PP_23SA	23S ribosomal RNA
*	?	NC_002947	= 198457	52 (0.880)	5 (0.090)	4/254	NT	9.1%	coding (3963/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 199796	50 (0.880)					coding (5302/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	= 201406	55 (0.930)	5 (0.090)	4/250	NT	7.8%	coding (6912/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	= 214039	66 (1.170)					coding (19545/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	205042 =	7 (0.120)	15 (0.260)	5/254	NT	68.9%	coding (10548/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	207783 =	NA (NA)					coding (13289/26049 nt)	PP_0168	putative surface adhesion protein
*	?	NC_002947	231515 =	55 (0.930)	3 (0.050)	3/250	NT	5.4%	coding (1176/1419 nt)	PP_0179	putative efflux transporter
	?	NC_002947	231546 =	52 (0.930)					coding (1207/1419 nt)	PP_0179	putative efflux transporter
*	?	NC_002947	238769 =	62 (1.050)	3 (0.050)	3/248	NT	5.2%	coding (788/942 nt)	hemC	porphobilinogen deaminase
	?	NC_002947	238806 =	50 (0.900)					coding (825/942 nt)	hemC	porphobilinogen deaminase
*	?	NC_002947	= 253605	47 (0.800)	4 (0.070)	4/244	NT	8.4%	coding (1512/1731 nt)	PP_0203	dipeptidase
	?	NC_002947	= 253676	44 (0.800)					coding (1441/1731 nt)	PP_0203	dipeptidase
*	?	NC_002947	= 282102	71 (1.210)	4 (0.070)	3/256	NT	5.7%	coding (755/933 nt)	PP_0228	serine acetyltransferase
	?	NC_002947	= 282144	63 (1.090)					coding (797/933 nt)	PP_0228	serine acetyltransferase
*	?	NC_002947	= 283647	62 (1.050)	6 (0.110)	4/254	NT	9.4%	coding (1098/2004 nt)	betT‑II	choline/carnitine/betaine transporter
	?	NC_002947	= 283670	56 (0.980)					coding (1121/2004 nt)	betT‑II	choline/carnitine/betaine transporter
*	?	NC_002947	346558 =	73 (1.240)	4 (0.070)	4/248	NT	6.3%	coding (1288/2247 nt)	PP_0287	hypothetical protein
	?	NC_002947	346651 =	49 (0.880)					coding (1195/2247 nt)	PP_0287	hypothetical protein
*	?	NC_002947	350502 =	50 (0.850)	4 (0.070)	4/256	NT	7.3%	coding (548/633 nt)	hisB	imidazoleglycerol‑phosphate dehydratase
	?	NC_002947	350539 =	53 (0.920)					coding (585/633 nt)	hisB	imidazoleglycerol‑phosphate dehydratase
*	?	NC_002947	= 357496	59 (1.000)	4 (0.070)	4/252	NT	6.7%	coding (841/1377 nt)	tdcG‑I	L‑serine dehydratase
	?	NC_002947	= 357527	55 (0.970)					coding (872/1377 nt)	tdcG‑I	L‑serine dehydratase
*	?	NC_002947	= 400298	61 (1.040)	3 (0.050)	3/254	NT	6.1%	intergenic (+33/‑117)	PP_0333/PP_0334	hypothetical protein/transposase
	?	NC_002947	= 400367	34 (0.600)					intergenic (+102/‑48)	PP_0333/PP_0334	hypothetical protein/transposase
*	?	NC_002947	= 437159	45 (0.760)	4 (0.070)	4/248	NT	7.8%	coding (129/888 nt)	PP_0358	membrane protein
	?	NC_002947	= 437191	52 (0.930)					coding (97/888 nt)	PP_0358	membrane protein
*	?	NC_002947	= 444405	48 (0.820)	4 (0.070)	4/252	NT	8.4%	coding (568/681 nt)	bioD	dethiobiotin synthetase
	?	NC_002947	= 444448	41 (0.720)					coding (611/681 nt)	bioD	dethiobiotin synthetase
*	?	NC_002947	478261 =	55 (0.930)	8 (0.180)	5/202	NT	18.7%	intergenic (+9/+101)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
	?	NC_002947	478356 =	27 (0.590)					intergenic (+104/+6)	PP_0393/cca	2‑amino‑4‑hydroxy‑6‑ hydroxymethyldihydropteridine pyrophosphokinase/multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase
*	?	NC_002947	= 508751	65 (1.100)	4 (0.070)	4/252	NT	5.3%	coding (260/1890 nt)	estP	esterase EstP
	?	NC_002947	= 508803	80 (1.410)					coding (208/1890 nt)	estP	esterase EstP
*	?	NC_002947	561381 =	65 (1.100)	6 (0.110)	6/240	NT	9.7%	intergenic (+18/‑49)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region
	?	NC_002947	561409 =	52 (0.960)					intergenic (+46/‑21)	rpmJ/PP_mr09	50S ribosomal protein L36/Alpha_RBS regulatory region
*	?	NC_002947	= 581178	63 (1.070)	5 (0.090)	5/252	NT	7.9%	coding (468/1428 nt)	selA	selenocysteine synthase
	?	NC_002947	= 581223	56 (0.990)					coding (513/1428 nt)	selA	selenocysteine synthase
*	?	NC_002947	= 588324	81 (1.380)	4 (0.070)	4/248	NT	5.1%	coding (322/876 nt)	PP_0498	hypothetical protein
	?	NC_002947	= 588349	72 (1.290)					coding (297/876 nt)	PP_0498	hypothetical protein
*	?	NC_002947	594420 =	62 (1.050)	6 (0.110)	5/252	NT	8.7%	coding (342/513 nt)	PP_0505	hypothetical protein
	?	NC_002947	594448 =	66 (1.170)					coding (314/513 nt)	PP_0505	hypothetical protein
*	?	NC_002947	611927 =	NA (NA)	4 (0.070)	4/244	NT	NA	coding (824/966 nt)	PP_0526	transposase
	?	NC_002947	611970 =	NA (NA)					coding (867/966 nt)	PP_0526	transposase
*	?	NC_002947	619998 =	72 (1.220)	4 (0.070)	4/250	NT	5.6%	coding (692/693 nt)	PP_0534	transcriptional regulator PfeR
	?	NC_002947	620048 =	67 (1.190)					coding (642/693 nt)	PP_0534	transcriptional regulator PfeR
*	?	NC_002947	642999 =	60 (1.020)	3 (0.050)	3/252	NT	5.1%	coding (1007/1023 nt)	acoB	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta
	?	NC_002947	643043 =	53 (0.940)					coding (963/1023 nt)	acoB	acetoin:2,6‑dichlorophenolindophenol oxidoreductase subunit beta
*	?	NC_002947	664466 =	69 (1.170)	4 (0.070)	4/248	NT	6.0%	coding (1332/4902 nt)	yfhM	lipoprotein
	?	NC_002947	664507 =	61 (1.090)					coding (1373/4902 nt)	yfhM	lipoprotein
*	?	NC_002947	673144 =	62 (1.050)	3 (0.050)	3/252	NT	5.3%	coding (376/777 nt)	PP_0574	LuxR family transcriptional regulator
	?	NC_002947	673185 =	48 (0.850)					coding (335/777 nt)	PP_0574	LuxR family transcriptional regulator
*	?	NC_002947	728555 =	70 (1.190)	4 (0.070)	4/246	NT	5.5%	coding (44/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
	?	NC_002947	728589 =	72 (1.300)					coding (78/963 nt)	rluD	23S rRNA pseudouridine(1911/1915/1917) synthase
*	?	NC_002947	= 741869	NA (NA)	6 (0.110)	6/250	NT	NA	intergenic (+469/‑31)	PP_t12/PP_0635	tRNA‑Thr/group II intron‑encoding maturase
	?	NC_002947	= 741902	NA (NA)					coding (3/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742597 =	NA (NA)	6 (0.100)	5/256	NT	NA	coding (698/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742657 =	NA (NA)					coding (758/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	742915 =	NA (NA)	10 (0.180)	8/250	NT	NA	coding (1016/1422 nt)	PP_0635	group II intron‑encoding maturase
	?	NC_002947	742945 =	NA (NA)					coding (1046/1422 nt)	PP_0635	group II intron‑encoding maturase
*	?	NC_002947	= 760628	66 (1.120)	6 (0.110)	6/246	NT	9.2%	coding (912/1386 nt)	PP_0652	gluconate transporter
	?	NC_002947	= 760665	57 (1.030)					coding (875/1386 nt)	PP_0652	gluconate transporter
*	?	NC_002947	797745 =	72 (1.220)	4 (0.070)	4/248	NT	5.3%	coding (193/390 nt)	PP_0683	hypothetical protein
	?	NC_002947	797806 =	76 (1.360)					coding (254/390 nt)	PP_0683	hypothetical protein
*	?	NC_002947	821949 =	46 (0.780)	3 (0.050)	3/248	NT	6.6%	coding (1320/2412 nt)	PP_0707	hypothetical protein
	?	NC_002947	821986 =	42 (0.750)					coding (1357/2412 nt)	PP_0707	hypothetical protein
*	?	NC_002947	= 834263	49 (0.830)	3 (0.050)	3/244	NT	6.2%	coding (939/1023 nt)	PP_0717	membrane protein
	?	NC_002947	= 834286	45 (0.820)					coding (962/1023 nt)	PP_0717	membrane protein
*	?	NC_002947	= 854468	65 (1.100)	4 (0.070)	3/252	NT	5.4%	coding (67/756 nt)	moeB	molybdopterin synthase adenylyltransferase subunit
	?	NC_002947	= 854502	79 (1.390)					coding (101/756 nt)	moeB	molybdopterin synthase adenylyltransferase subunit
*	?	NC_002947	= 855438	47 (0.800)	3 (0.050)	3/250	NT	6.9%	coding (289/798 nt)	murI	glutamate racemase
	?	NC_002947	= 855501	36 (0.640)					coding (352/798 nt)	murI	glutamate racemase
*	?	NC_002947	887381 =	65 (1.100)	4 (0.070)	4/248	NT	6.0%	coding (415/1608 nt)	PP_0768	TPR domain‑containing response regulator
	?	NC_002947	887456 =	63 (1.130)					coding (490/1608 nt)	PP_0768	TPR domain‑containing response regulator
*	?	NC_002947	= 893783	65 (1.100)	4 (0.070)	4/252	NT	5.7%	coding (266/303 nt)	PP_0775	hypothetical protein
	?	NC_002947	= 893871	71 (1.250)					coding (178/303 nt)	PP_0775	hypothetical protein
*	?	NC_002947	895923 =	72 (1.220)	4 (0.070)	4/248	NT	5.7%	coding (492/1191 nt)	PP_0778	group 1 family glycosyl transferase
	?	NC_002947	895978 =	65 (1.170)					coding (437/1191 nt)	PP_0778	group 1 family glycosyl transferase
*	?	NC_002947	907815 =	51 (0.870)	6 (0.110)	6/248	NT	10.7%	coding (396/777 nt)	yjjV	putative hydrolase
	?	NC_002947	907878 =	52 (0.930)					coding (333/777 nt)	yjjV	putative hydrolase
*	?	NC_002947	= 923914	44 (0.750)	3 (0.050)	3/248	NT	6.5%	coding (1279/2169 nt)	PP_0804	protein secretion ABC transporter permease/ATP‑binding protein
	?	NC_002947	= 923954	44 (0.790)					coding (1239/2169 nt)	PP_0804	protein secretion ABC transporter permease/ATP‑binding protein
*	?	NC_002947	= 945822	50 (0.850)	4 (0.070)	3/248	NT	6.0%	coding (1547/1557 nt)	norR	DNA‑binding transcriptional regulator
	?	NC_002947	= 945913	78 (1.400)					coding (1456/1557 nt)	norR	DNA‑binding transcriptional regulator
*	?	NC_002947	970912 =	44 (0.750)	5 (0.090)	4/252	NT	10.6%	coding (761/1116 nt)	tgt	queuine tRNA‑ribosyltransferase
	?	NC_002947	970966 =	42 (0.740)					coding (815/1116 nt)	tgt	queuine tRNA‑ribosyltransferase
*	?	NC_002947	971935 =	56 (0.950)	3 (0.050)	3/252	NT	5.1%	coding (227/1863 nt)	secD	protein translocase subunit SecD
	?	NC_002947	971976 =	58 (1.020)					coding (268/1863 nt)	secD	protein translocase subunit SecD
*	?	NC_002947	= 978599	71 (1.210)	4 (0.070)	3/248	NT	5.8%	coding (49/1215 nt)	iscS‑I	cysteine desulfurase
	?	NC_002947	= 978633	63 (1.130)					coding (83/1215 nt)	iscS‑I	cysteine desulfurase
*	?	NC_002947	981325 =	60 (1.020)	5 (0.090)	4/242	NT	8.9%	coding (202/1863 nt)	hscA	DnaK‑like molecular chaperone
	?	NC_002947	981403 =	47 (0.860)					coding (280/1863 nt)	hscA	DnaK‑like molecular chaperone
*	?	NC_002947	996204 =	74 (1.260)	4 (0.070)	4/244	NT	5.8%	coding (1392/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
	?	NC_002947	996265 =	61 (1.110)					coding (1331/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
*	?	NC_002947	996780 =	52 (0.880)	4 (0.070)	4/248	NT	8.3%	coding (816/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
	?	NC_002947	996841 =	39 (0.700)					coding (755/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
*	?	NC_002947	1005922 =	66 (1.120)	4 (0.070)	4/256	NT	5.9%	coding (852/2430 nt)	PP_0867	FecA‑like outer membrane receptor
	?	NC_002947	1005950 =	62 (1.080)					coding (880/2430 nt)	PP_0867	FecA‑like outer membrane receptor
*	?	NC_002947	= 1016619	54 (0.920)	3 (0.050)	3/248	NT	5.4%	coding (487/825 nt)	PP_0876	AraC family transcriptional regulator
	?	NC_002947	= 1016646	54 (0.970)					coding (460/825 nt)	PP_0876	AraC family transcriptional regulator
*	?	NC_002947	1034650 =	54 (0.920)	3 (0.050)	3/250	NT	5.9%	coding (687/1158 nt)	PP_0892	phospholipase family protein
	?	NC_002947	1034714 =	45 (0.800)					coding (751/1158 nt)	PP_0892	phospholipase family protein
*	?	NC_002947	= 1036001	67 (1.140)	4 (0.070)	4/248	NT	5.9%	coding (180/399 nt)	PP_0894	hypothetical protein
	?	NC_002947	= 1036045	64 (1.150)					coding (136/399 nt)	PP_0894	hypothetical protein
*	?	NC_002947	1036521 =	70 (1.190)	4 (0.070)	4/244	NT	5.9%	coding (226/591 nt)	PP_0895	hypothetical protein
	?	NC_002947	1036566 =	62 (1.130)					coding (271/591 nt)	PP_0895	hypothetical protein
*	?	NC_002947	1054325 =	47 (0.800)	3 (0.050)	3/246	NT	6.6%	coding (139/588 nt)	PP_0912	hypothetical protein
	?	NC_002947	1054389 =	41 (0.740)					coding (75/588 nt)	PP_0912	hypothetical protein
*	?	NC_002947	= 1084438	46 (0.780)	3 (0.060)	3/242	NT	5.8%	coding (263/852 nt)	PP_0939	carbon‑nitrogen hydrolase family protein
	?	NC_002947	= 1084501	55 (1.010)					coding (326/852 nt)	PP_0939	carbon‑nitrogen hydrolase family protein
*	?	NC_002947	= 1107606	57 (0.970)	4 (0.070)	4/252	NT	7.2%	coding (758/1047 nt)	hisC	histidinol‑phosphate aminotransferase
	?	NC_002947	= 1107644	48 (0.850)					coding (796/1047 nt)	hisC	histidinol‑phosphate aminotransferase
*	?	NC_002947	= 1120328	61 (1.040)	4 (0.070)	4/244	NT	6.5%	intergenic (‑70/‑232)	pepA/PP_0982	cytosol aminopeptidase/YjgP/YjgQ family permease
	?	NC_002947	= 1120403	58 (1.060)					intergenic (‑145/‑157)	pepA/PP_0982	cytosol aminopeptidase/YjgP/YjgQ family permease
*	?	NC_002947	1126438 =	72 (1.220)	4 (0.070)	4/252	NT	5.7%	coding (109/1377 nt)	tdcG‑II	L‑serine dehydratase
	?	NC_002947	1126491 =	62 (1.090)					coding (56/1377 nt)	tdcG‑II	L‑serine dehydratase
*	?	NC_002947	1136258 =	73 (1.240)	4 (0.070)	3/248	NT	5.9%	coding (717/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein
	?	NC_002947	1136328 =	58 (1.040)					coding (647/1509 nt)	PP_0997	sigma‑54 dependent transcriptional regulator/sensory box protein
*	?	NC_002947	1156415 =	39 (0.660)	3 (0.050)	3/248	NT	6.9%	intergenic (+118/‑98)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
	?	NC_002947	1156456 =	44 (0.790)					intergenic (+159/‑57)	PP_1013/yihS	sensor histidine kinase/aldose‑ketose isomerase
*	?	NC_002947	= 1228625	55 (0.930)	4 (0.070)	4/248	NT	6.6%	coding (1805/4320 nt)	PP_1072	leucine‑rich repeat‑containing protein
	?	NC_002947	= 1228645	61 (1.090)					coding (1825/4320 nt)	PP_1072	leucine‑rich repeat‑containing protein
*	?	NC_002947	1236861 =	44 (0.750)	7 (0.120)	6/254	NT	14.3%	coding (371/471 nt)	ybaK	Cys‑tRNAPro deacylase
	?	NC_002947	1236892 =	41 (0.720)					coding (402/471 nt)	ybaK	Cys‑tRNAPro deacylase
*	?	NC_002947	1241436 =	55 (0.930)	5 (0.090)	3/248	NT	9.1%	coding (2037/2109 nt)	PP_1080	molybdopterin‑binding oxidoreductase
	?	NC_002947	1241477 =	48 (0.860)					coding (2078/2109 nt)	PP_1080	molybdopterin‑binding oxidoreductase
*	?	NC_002947	1266384 =	50 (0.850)	3 (0.050)	3/250	NT	6.5%	coding (1604/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1266425 =	38 (0.680)					coding (1563/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	1267027 =	45 (0.760)	3 (0.050)	3/254	NT	6.4%	coding (961/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1267092 =	44 (0.770)					coding (896/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
*	?	NC_002947	1296784 =	NA (NA)	5 (0.090)	3/248	NT	NA	intergenic (‑537/‑29)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	1296822 =	NA (NA)					coding (10/1329 nt)	PP_1133	transposase
*	?	NC_002947	= 1296790	NA (NA)	5 (0.090)	3/248	NT	NA	intergenic (‑543/‑23)	nhaA‑I/PP_1133	Na(+)/H(+) antiporter NhaA/transposase
	?	NC_002947	= 1296814	NA (NA)					coding (2/1329 nt)	PP_1133	transposase
*	?	NC_002947	1298266 =	NA (NA)	9 (0.160)	7/254	NT	NA	intergenic (+125/+304)	PP_1133/PP_1134	transposase/hypothetical protein
	?	NC_002947	1298312 =	NA (NA)					intergenic (+171/+258)	PP_1133/PP_1134	transposase/hypothetical protein
*	?	NC_002947	1309726 =	54 (0.920)	5 (0.090)	5/250	NT	9.0%	coding (1807/2265 nt)	PP_1144	membrane protein
	?	NC_002947	1309768 =	49 (0.870)					coding (1765/2265 nt)	PP_1144	membrane protein
*	?	NC_002947	1311707 =	58 (0.980)	3 (0.060)	3/236	NT	5.9%	intergenic (‑175/+103)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
	?	NC_002947	1311792 =	44 (0.830)					intergenic (‑260/+18)	PP_1144/rapA	membrane protein/RNA polymerase‑associated protein RapA
*	?	NC_002947	= 1335831	53 (0.900)	8 (0.150)	7/240	NT	14.1%	coding (45/672 nt)	PP_1161	lipoprotein
	?	NC_002947	= 1335837	49 (0.910)					coding (51/672 nt)	PP_1161	lipoprotein
*	?	NC_002947	= 1338751	69 (1.170)	4 (0.070)	4/244	NT	5.6%	coding (1467/2037 nt)	PP_1163	FAD‑binding oxidoreductase
	?	NC_002947	= 1338779	70 (1.280)					coding (1495/2037 nt)	PP_1163	FAD‑binding oxidoreductase
*	?	NC_002947	= 1347002	52 (0.880)	3 (0.060)	3/242	NT	5.5%	intergenic (‑110/+294)	udh/galP‑I	uronate dehydrogenase/porin‑like protein
	?	NC_002947	= 1347013	56 (1.030)					intergenic (‑121/+283)	udh/galP‑I	uronate dehydrogenase/porin‑like protein
*	?	NC_002947	1354373 =	56 (0.950)	3 (0.050)	3/246	NT	5.3%	coding (1004/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
	?	NC_002947	1354416 =	55 (0.990)					coding (961/2880 nt)	nrdA	ribonucleoside‑diphosphate reductase subunit alpha
*	?	NC_002947	= 1375310	63 (1.070)	4 (0.070)	4/254	NT	6.2%	coding (930/1911 nt)	kup	potassium transport system protein Kup
	?	NC_002947	= 1375342	60 (1.050)					coding (962/1911 nt)	kup	potassium transport system protein Kup
*	?	NC_002947	= 1426996	NA (NA)	3 (0.050)	3/248	NT	NA	coding (894/1422 nt)	PP_1250	group II intron‑encoding maturase
	?	NC_002947	= 1427022	NA (NA)					coding (920/1422 nt)	PP_1250	group II intron‑encoding maturase
*	?	NC_002947	1436018 =	59 (1.000)	7 (0.130)	7/246	NT	11.3%	intergenic (‑55/+98)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
	?	NC_002947	1436095 =	54 (0.980)					intergenic (‑132/+21)	PP_1256/PP_1257	alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase
*	?	NC_002947	= 1454366	61 (1.040)	4 (0.070)	4/250	NT	6.6%	coding (1000/1104 nt)	PP_1272	multidrug MFS transporter membrane fusion protein
	?	NC_002947	= 1454418	55 (0.980)					coding (1052/1104 nt)	PP_1272	multidrug MFS transporter membrane fusion protein
*	?	NC_002947	1455925 =	54 (0.920)	5 (0.090)	5/254	NT	8.9%	intergenic (+4/+245)	PP_1273/PP_1274	multidrug MFS transporter outer membrane protein/short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	1455962 =	50 (0.880)					intergenic (+41/+208)	PP_1273/PP_1274	multidrug MFS transporter outer membrane protein/short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	= 1499458	30 (0.510)	8 (0.140)	8/258	NT	20.4%	intergenic (+35/‑129)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
	?	NC_002947	= 1499495	33 (0.570)					intergenic (+72/‑92)	trpS/zapE	tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein
*	?	NC_002947	= 1519906	56 (0.950)	4 (0.070)	3/248	NT	6.8%	coding (246/1083 nt)	mraY	phospho‑N‑acetylmuramoyl‑pentapeptide‑ transferase
	?	NC_002947	= 1519929	56 (1.000)					coding (269/1083 nt)	mraY	phospho‑N‑acetylmuramoyl‑pentapeptide‑ transferase
*	?	NC_002947	= 1542752	58 (0.980)	7 (0.130)	5/248	NT	10.6%	coding (532/849 nt)	PP_1353	membrane protein
	?	NC_002947	= 1542773	63 (1.130)					coding (553/849 nt)	PP_1353	membrane protein
*	?	NC_002947	1545615 =	60 (1.020)	3 (0.050)	3/248	NT	5.1%	coding (488/1548 nt)	ampG	muropeptide permease AmpG
	?	NC_002947	1545650 =	55 (0.990)					coding (453/1548 nt)	ampG	muropeptide permease AmpG
*	?	NC_002947	1559988 =	64 (1.090)	8 (0.140)	8/250	NT	11.6%	coding (60/1122 nt)	PP_1370	group 1 family glycosyl transferase
	?	NC_002947	1560012 =	61 (1.090)					coding (36/1122 nt)	PP_1370	group 1 family glycosyl transferase
*	?	NC_002947	1574617 =	69 (1.170)	4 (0.070)	4/248	NT	6.5%	coding (398/525 nt)	pcaP	porin
	?	NC_002947	1574656 =	50 (0.900)					coding (359/525 nt)	pcaP	porin
*	?	NC_002947	= 1604658	74 (1.260)	5 (0.090)	4/248	NT	6.5%	coding (1593/1707 nt)	PP_1407	sulfate transporter
	?	NC_002947	= 1604702	73 (1.310)					coding (1549/1707 nt)	PP_1407	sulfate transporter
*	?	NC_002947	1604908 =	51 (0.870)	4 (0.070)	4/244	NT	8.2%	coding (1343/1707 nt)	PP_1407	sulfate transporter
	?	NC_002947	1604959 =	42 (0.770)					coding (1292/1707 nt)	PP_1407	sulfate transporter
*	?	NC_002947	1612852 =	46 (0.780)	4 (0.070)	4/242	NT	9.4%	coding (649/693 nt)	ung	uracil‑DNA glycosylase
	?	NC_002947	1612894 =	35 (0.640)					coding (691/693 nt)	ung	uracil‑DNA glycosylase
*	?	NC_002947	= 1635761	48 (0.820)	4 (0.070) +CTT	4/256	NT	13.6%	intergenic (+107/‑63)	era/recO	GTPase Era/DNA repair protein RecO
	?	NC_002947	5681433 =	4 (0.070)					intergenic (‑151/+53)	PP_4986/PP_4987	hemolysin III family channel protein/putative Chemotaxis protein
*	?	NC_002947	1640764 =	63 (1.070)	4 (0.070)	4/248	NT	7.1%	coding (187/957 nt)	cmoB	tRNA 5‑methoxyuridine(34) synthase CmoB
	?	NC_002947	1640799 =	45 (0.810)					coding (152/957 nt)	cmoB	tRNA 5‑methoxyuridine(34) synthase CmoB
*	?	NC_002947	1655524 =	58 (0.980)	4 (0.070)	4/252	NT	6.6%	coding (1245/4527 nt)	PP_1449	hypothetical protein
	?	NC_002947	1655560 =	57 (1.010)					coding (1209/4527 nt)	PP_1449	hypothetical protein
*	?	NC_002947	1722037 =	74 (1.260)	5 (0.090)	5/250	NT	6.8%	coding (670/3066 nt)	PP_1517	RND family transporter
	?	NC_002947	1722076 =	67 (1.190)					coding (709/3066 nt)	PP_1517	RND family transporter
*	?	NC_002947	1730772 =	62 (1.050)	4 (0.070)	4/258	NT	6.4%	coding (316/1152 nt)	dapE	succinyl‑diaminopimelate desuccinylase
	?	NC_002947	1730807 =	55 (0.950)					coding (281/1152 nt)	dapE	succinyl‑diaminopimelate desuccinylase
*	?	NC_002947	1731163 =	44 (0.750)	7 (0.150)	6/206	NT	15.6%	intergenic (‑76/+115)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
	?	NC_002947	1731255 =	41 (0.890)					intergenic (‑168/+23)	dapE/PP_1526	succinyl‑diaminopimelate desuccinylase/beta‑(1‑3)‑glucosyl transferase
*	?	NC_002947	= 1748247	49 (0.830)	3 (0.050)	3/244	NT	6.0%	coding (421/438 nt)	PP_1548	hypothetical protein
	?	NC_002947	= 1748274	49 (0.890)					coding (394/438 nt)	PP_1548	hypothetical protein
*	?	NC_002947	= 1750785	50 (0.850)	5 (0.090)	5/252	NT	9.3%	coding (144/855 nt)	PP_1551	replication protein O
	?	NC_002947	= 1750809	49 (0.860)					coding (168/855 nt)	PP_1551	replication protein O
*	?	NC_002947	= 1755406	63 (1.070)	6 (0.110)	5/250	NT	10.2%	intergenic (+121/‑79)	PP_1558/PP_1559	hypothetical protein/holin
	?	NC_002947	= 1755446	46 (0.820)					intergenic (+161/‑39)	PP_1558/PP_1559	hypothetical protein/holin
*	?	NC_002947	= 1775341	44 (0.750)	4 (0.070)	4/244	NT	9.3%	coding (521/1077 nt)	PP_1582	hypothetical protein
	?	NC_002947	= 1775416	37 (0.670)					coding (596/1077 nt)	PP_1582	hypothetical protein
*	?	NC_002947	= 1784965	52 (0.880)	5 (0.090)	5/254	NT	8.7%	intergenic (‑65/‑157)	map/PP_mr21	methionine aminopeptidase/t44 ncRNA
	?	NC_002947	= 1784996	55 (0.960)					intergenic (‑96/‑126)	map/PP_mr21	methionine aminopeptidase/t44 ncRNA
*	?	NC_002947	1799056 =	51 (0.870)	4 (0.070)	4/248	NT	6.9%	coding (979/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1799094 =	59 (1.060)					coding (1017/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	1816461 =	42 (0.710)	3 (0.050)	3/248	NT	6.8%	coding (333/750 nt)	surE	5'‑nucleotidase SurE
	?	NC_002947	1816538 =	42 (0.750)					coding (410/750 nt)	surE	5'‑nucleotidase SurE
*	?	NC_002947	1831620 =	61 (1.040)	4 (0.070)	4/248	NT	6.0%	coding (499/711 nt)	yfiP	hypothetical protein
	?	NC_002947	1831652 =	67 (1.200)					coding (531/711 nt)	yfiP	hypothetical protein
*	?	NC_002947	= 1839186	44 (0.750)	6 (0.110)	6/246	NT	10.8%	coding (333/354 nt)	yfgD	arsenate reductase
	?	NC_002947	= 1839253	58 (1.050)					coding (266/354 nt)	yfgD	arsenate reductase
*	?	NC_002947	1844134 =	0 (0.000)	66 (1.170)	52/252	NT	72.9%	coding (660/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	= 2179376	49 (0.860)					intergenic (+175/+93)	PP_1931/PP_5486	hypothetical protein/hypothetical protein
*	?	NC_002947	= 1844137	0 (0.000)	42 (0.740)	39/254	NT	56.8%	coding (657/2754 nt)	gacS	sensor protein GacS
	?	NC_002947	2177702 =	64 (1.120)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein
*	?	NC_002947	1880369 =	53 (0.900)	5 (0.090)	5/248	NT	9.2%	coding (43/930 nt)	PP_1688	LysR family transcriptional regulator
	?	NC_002947	1880411 =	49 (0.880)					coding (85/930 nt)	PP_1688	LysR family transcriptional regulator
*	?	NC_002947	= 1903876	35 (0.590)	3 (0.050)	3/246	NT	8.1%	coding (131/2553 nt)	nirB	nitrite reductase large subunit
	?	NC_002947	= 1903914	35 (0.630)					coding (169/2553 nt)	nirB	nitrite reductase large subunit
*	?	NC_002947	= 1967141	58 (0.980)	8 (0.140)	7/254	NT	18.6%	intergenic (+11/+108)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	= 1967243	14 (0.250)					intergenic (+113/+6)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	1967145 =	54 (0.920)	5 (0.110)	7/196	NT	15.3%	intergenic (+15/+104)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
	?	NC_002947	1967241 =	15 (0.340)					intergenic (+111/+8)	PP_1762/yciK	hypothetical protein/putative oxidoreductase
*	?	NC_002947	2007976 =	54 (0.920)	4 (0.070)	4/248	NT	7.1%	coding (987/1605 nt)	PP_1791	aldolase/synthase
	?	NC_002947	2008015 =	53 (0.950)					coding (948/1605 nt)	PP_1791	aldolase/synthase
*	?	NC_002947	= 2018585	69 (1.170)	5 (0.090)	5/252	NT	6.3%	intergenic (‑2193/‑141)	PP_1795/PP_1797	hypothetical protein/HlyD family secretion protein
	?	NC_002947	= 2018616	83 (1.470)					intergenic (‑2224/‑110)	PP_1795/PP_1797	hypothetical protein/HlyD family secretion protein
*	?	NC_002947	2032810 =	NA (NA)	4 (0.070)	3/250	NT	18.9%	coding (291/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2032835 =	18 (0.310)					coding (316/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	2033636 =	NA (NA)	4 (0.070)	4/248	NT	100%	coding (1117/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
	?	NC_002947	2033644 =	0 (0.000)					coding (1125/1665 nt)	pgi‑I	glucose 6‑phosphate isomerase
*	?	NC_002947	2066865 =	75 (1.270)	5 (0.090)	5/248	NT	6.7%	coding (409/972 nt)	PP_1843	Mg(2+)/Co(2+) transporter
	?	NC_002947	2066918 =	68 (1.220)					coding (356/972 nt)	PP_1843	Mg(2+)/Co(2+) transporter
*	?	NC_002947	= 2069969	NA (NA)	4 (0.070)	4/248	NT	NA	coding (343/1422 nt)	PP_1846	group II intron‑encoding maturase
	?	NC_002947	= 2070049	NA (NA)					coding (423/1422 nt)	PP_1846	group II intron‑encoding maturase
*	?	NC_002947	= 2073888	46 (0.780)	3 (0.050)	3/248	NT	6.0%	coding (101/381 nt)	PP_1849	hypothetical protein
	?	NC_002947	= 2073917	51 (0.910)					coding (72/381 nt)	PP_1849	hypothetical protein
*	?	NC_002947	2076009 =	44 (0.750)	4 (0.070)	3/248	NT	8.5%	coding (525/879 nt)	PP_5479	LysR family transcriptional regulator
	?	NC_002947	2076057 =	44 (0.790)					coding (573/879 nt)	PP_5479	LysR family transcriptional regulator
*	?	NC_002947	2080780 =	58 (0.980)	3 (0.050)	3/248	NT	5.6%	coding (268/570 nt)	efp	elongation factor P
	?	NC_002947	2080827 =	46 (0.830)					coding (315/570 nt)	efp	elongation factor P
*	?	NC_002947	= 2087031	NA (NA)	3 (0.050)	3/254	NT	NA	coding (1146/1302 nt)	PP_1865	transposase
	?	NC_002947	= 2087061	NA (NA)					coding (1176/1302 nt)	PP_1865	transposase
*	?	NC_002947	= 2095635	62 (1.050)	5 (0.090)	4/246	NT	8.1%	coding (843/1212 nt)	alaA	glutamate‑pyruvate aminotransferase
	?	NC_002947	= 2095666	55 (0.990)					coding (812/1212 nt)	alaA	glutamate‑pyruvate aminotransferase
*	?	NC_002947	= 2098428	56 (0.950)	3 (0.060)	3/234	NT	5.7%	coding (1462/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 2098449	50 (0.950)					coding (1441/2358 nt)	PP_1875	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	2099960 =	25 (0.420)	5 (0.100)	5/216	NT	17.7%	intergenic (‑71/‑134)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100055 =	26 (0.540)					intergenic (‑166/‑39)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
*	?	NC_002947	2132999 =	60 (1.020)	4 (0.070)	4/248	NT	6.8%	coding (13/780 nt)	PP_1890	type I pili chaperone protein FimC
	?	NC_002947	2133027 =	53 (0.950)					intergenic (‑16/+38)	PP_1890/fimI	type I pili chaperone protein FimC/type I pili subunit FimI
*	?	NC_002947	= 2180702	70 (1.190)	7 (0.130)	6/246	NT	9.6%	intergenic (‑147/‑77)	PP_1932/PP_1934	hypothetical protein/hypothetical protein
	?	NC_002947	= 2180718	66 (1.190)					intergenic (‑163/‑61)	PP_1932/PP_1934	hypothetical protein/hypothetical protein
*	?	NC_002947	= 2229008	49 (0.830)	4 (0.070)	4/244	NT	8.5%	coding (144/783 nt)	ycfH	tRNA D‑aminoacylase
	?	NC_002947	= 2229057	40 (0.730)					coding (193/783 nt)	ycfH	tRNA D‑aminoacylase
*	?	NC_002947	2232043 =	69 (1.170)	6 (0.110)	4/248	NT	8.6%	coding (180/606 nt)	PP_1970	lipoprotein
	?	NC_002947	2232089 =	62 (1.110)					coding (226/606 nt)	PP_1970	lipoprotein
*	?	NC_002947	2252519 =	36 (0.610)	3 (0.050)	3/244	NT	8.1%	coding (420/645 nt)	leuD	3‑isopropylmalate dehydratase small subunit
	?	NC_002947	2252563 =	35 (0.640)					coding (464/645 nt)	leuD	3‑isopropylmalate dehydratase small subunit
*	?	NC_002947	= 2252527	36 (0.610)	3 (0.050)	3/244	NT	8.1%	coding (428/645 nt)	leuD	3‑isopropylmalate dehydratase small subunit
	?	NC_002947	= 2252553	35 (0.640)					coding (454/645 nt)	leuD	3‑isopropylmalate dehydratase small subunit
*	?	NC_002947	2256171 =	42 (0.710)	3 (0.050)	3/246	NT	7.3%	intergenic (+231/‑473)	asd/PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
	?	NC_002947	2256263 =	37 (0.670)					intergenic (+323/‑381)	asd/PP_1990	aspartate‑semialdehyde dehydrogenase/transposase
*	?	NC_002947	= 2270056	44 (0.750)	4 (0.070)	4/248	NT	8.4%	coding (859/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	NC_002947	= 2270098	46 (0.830)					coding (901/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
*	?	NC_002947	2295775 =	36 (0.610)	4 (0.080)	4/214	NT	13.0%	intergenic (+21/+112)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
	?	NC_002947	2295860 =	24 (0.500)					intergenic (+106/+27)	PP_5496/PP_2023	hypothetical protein/glutathione S‑transferase family protein
*	?	NC_002947	2301453 =	0 (0.000)	59 (1.030)	50/256	NT	100%	intergenic (‑97/‑234)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	2925429 =	NA (NA)					intergenic (‑177/+388)	PP_2563/PP_2564	antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	= 2301454	0 (0.000)	39 (0.670)	36/258	NT	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
*	?	NC_002947	= 2307372	44 (0.750)	3 (0.050)	3/250	NT	6.5%	coding (258/1077 nt)	PP_2029	von Willebrand factor type A domain‑containing protein
	?	NC_002947	= 2307459	45 (0.800)					coding (171/1077 nt)	PP_2029	von Willebrand factor type A domain‑containing protein
*	?	NC_002947	2310524 =	58 (0.980)	3 (0.060)	3/242	NT	5.4%	coding (275/1311 nt)	PP_2033	hypothetical protein
	?	NC_002947	2310581 =	51 (0.940)					coding (332/1311 nt)	PP_2033	hypothetical protein
*	?	NC_002947	2327072 =	51 (0.870)	3 (0.050)	3/248	NT	5.9%	coding (232/1962 nt)	PP_2045	metallo‑beta‑lactamase family protein
	?	NC_002947	2327118 =	47 (0.840)					coding (186/1962 nt)	PP_2045	metallo‑beta‑lactamase family protein
*	?	NC_002947	2357050 =	53 (0.900)	4 (0.070)	4/242	NT	7.7%	coding (328/387 nt)	PP_2071	hypothetical protein
	?	NC_002947	2357122 =	47 (0.860)					coding (256/387 nt)	PP_2071	hypothetical protein
*	?	NC_002947	= 2412856	53 (0.900)	4 (0.070)	4/246	NT	7.2%	intergenic (+120/‑301)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
	?	NC_002947	= 2412933	53 (0.960)					intergenic (+197/‑224)	rlmM/PP_2114	23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase
*	?	NC_002947	2417488 =	48 (0.820)	3 (0.050)	3/248	NT	6.2%	coding (523/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein
	?	NC_002947	2417551 =	45 (0.810)					coding (586/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein
*	?	NC_002947	2430851 =	52 (0.880)	3 (0.050)	3/250	NT	5.8%	coding (1106/1974 nt)	PP_2130	lytic transglycosylase
	?	NC_002947	2430901 =	47 (0.840)					coding (1056/1974 nt)	PP_2130	lytic transglycosylase
*	?	NC_002947	2465533 =	46 (0.780)	5 (0.090)	5/246	NT	9.7%	coding (105/1353 nt)	PP_2157	sensor histidine kinase
	?	NC_002947	2465573 =	50 (0.900)					coding (65/1353 nt)	PP_2157	sensor histidine kinase
*	?	NC_002947	2468032 =	51 (0.870)	3 (0.050)	3/252	NT	5.7%	coding (205/264 nt)	PP_2161	hypothetical protein
	?	NC_002947	2468079 =	50 (0.880)					coding (158/264 nt)	PP_2161	hypothetical protein
*	?	NC_002947	2468066 =	53 (0.900)	5 (0.090)	5/250	NT	9.3%	coding (171/264 nt)	PP_2161	hypothetical protein
	?	NC_002947	2468097 =	47 (0.840)					coding (140/264 nt)	PP_2161	hypothetical protein
*	?	NC_002947	= 2471790	42 (0.710)	4 (0.070)	4/244	NT	9.0%	coding (177/483 nt)	PP_2166	anti‑anti‑sigma factor
	?	NC_002947	= 2471813	42 (0.770)					coding (200/483 nt)	PP_2166	anti‑anti‑sigma factor
*	?	NC_002947	= 2486672	65 (1.100)	5 (0.090)	4/250	NT	7.5%	coding (1264/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
	?	NC_002947	= 2486687	62 (1.100)					coding (1279/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
*	?	NC_002947	2507110 =	48 (0.820)	3 (0.060)	3/242	NT	6.5%	intergenic (+8/+65)	PP_2200/PP_2201	hypothetical protein/alpha/beta family hydrolase
	?	NC_002947	2507160 =	42 (0.770)					intergenic (+58/+15)	PP_2200/PP_2201	hypothetical protein/alpha/beta family hydrolase
*	?	NC_002947	= 2530780	NA (NA)	5 (0.090)	4/246	NT	6.5%	coding (19/369 nt)	PP_2219	hypothetical protein
	?	NC_002947	4022364 =	77 (1.310)					intergenic (‑59/+609)	PP_3547/emrB	NAD(P)‑binding oxidoreductase/multidrug transporter permease
*	?	NC_002947	2534228 =	47 (0.800)	3 (0.050)	3/248	NT	7.5%	coding (1555/1680 nt)	mrpD	K(+)/H(+) antiporter subunit D
	?	NC_002947	2534266 =	30 (0.540)					coding (1517/1680 nt)	mrpD	K(+)/H(+) antiporter subunit D
*	?	NC_002947	= 2535887	56 (0.950)	3 (0.050)	3/248	NT	6.5%	coding (237/345 nt)	mrpC	K(+)/H(+) antiporter subunit C
	?	NC_002947	= 2535942	33 (0.590)					coding (182/345 nt)	mrpC	K(+)/H(+) antiporter subunit C
*	?	NC_002947	2543279 =	56 (0.950)	6 (0.110)	6/250	NT	10.4%	coding (392/771 nt)	PP_2236	alpha/beta family hydrolase
	?	NC_002947	2543317 =	50 (0.890)					coding (354/771 nt)	PP_2236	alpha/beta family hydrolase
*	?	NC_002947	2565638 =	60 (1.020)	3 (0.050)	3/254	NT	5.4%	coding (1314/1932 nt)	pctB	methyl‑accepting chemotaxis protein PctB
	?	NC_002947	2565671 =	46 (0.810)					coding (1281/1932 nt)	pctB	methyl‑accepting chemotaxis protein PctB
*	?	NC_002947	= 2590693	54 (0.920)	5 (0.090)	4/252	NT	8.0%	coding (37/426 nt)	PP_2268	endodeoxyribonuclease I
	?	NC_002947	= 2590730	63 (1.110)					coding (74/426 nt)	PP_2268	endodeoxyribonuclease I
*	?	NC_002947	= 2607902	48 (0.820)	3 (0.050)	3/244	NT	6.6%	coding (11/414 nt)	PP_5514	hypothetical protein
	?	NC_002947	= 2607924	40 (0.730)					coding (33/414 nt)	PP_5514	hypothetical protein
*	?	NC_002947	2662511 =	59 (1.000)	4 (0.070)	4/246	NT	6.6%	coding (615/891 nt)	mmgF	2‑methylisocitrate lyase
	?	NC_002947	2662548 =	57 (1.030)					coding (652/891 nt)	mmgF	2‑methylisocitrate lyase
*	?	NC_002947	2717866 =	47 (0.800)	5 (0.090)	4/252	NT	8.8%	coding (86/1035 nt)	PP_2377	acyltransferase
	?	NC_002947	2717918 =	58 (1.020)					coding (138/1035 nt)	PP_2377	acyltransferase
*	?	NC_002947	2723772 =	56 (0.950)	3 (0.060)	3/242	NT	5.6%	coding (131/315 nt)	PP_2384	membrane protein
	?	NC_002947	2723809 =	49 (0.900)					coding (94/315 nt)	PP_2384	membrane protein
*	?	NC_002947	= 2726248	39 (0.660)	3 (0.050)	3/250	NT	7.4%	coding (408/1083 nt)	PP_2387	hypothetical protein
	?	NC_002947	= 2726273	38 (0.680)					coding (383/1083 nt)	PP_2387	hypothetical protein
*	?	NC_002947	= 2740726	39 (0.660)	3 (0.050)	3/248	NT	7.5%	coding (3105/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2740749	37 (0.660)					coding (3128/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
*	?	NC_002947	2780527 =	46 (0.780)	3 (0.050)	3/254	NT	6.3%	coding (301/480 nt)	PP_2433	hypothetical protein
	?	NC_002947	2780572 =	45 (0.790)					coding (346/480 nt)	PP_2433	hypothetical protein
*	?	NC_002947	2815455 =	64 (1.090)	6 (0.110)	4/252	NT	8.9%	coding (1592/2382 nt)	pheT	phenylalanine‑‑tRNA ligase subunit beta
	?	NC_002947	2815485 =	62 (1.090)					coding (1622/2382 nt)	pheT	phenylalanine‑‑tRNA ligase subunit beta
*	?	NC_002947	2879841 =	59 (1.000)	4 (0.070)	4/248	NT	7.4%	coding (224/900 nt)	PP_2534	LysR family transcriptional regulator
	?	NC_002947	2879921 =	44 (0.790)					coding (144/900 nt)	PP_2534	LysR family transcriptional regulator
*	?	NC_002947	2912399 =	47 (0.800)	3 (0.050)	3/244	NT	6.3%	coding (1419/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
	?	NC_002947	2912449 =	45 (0.820)					coding (1469/10827 nt)	PP_2561	hemolysin‑type calcium‑binding bacteriocin
*	?	NC_002947	= 2936886	49 (0.830)	3 (0.050)	3/246	NT	5.8%	coding (920/1677 nt)	PP_2569	MHS family metabolite MFS transporter
	?	NC_002947	= 2936914	51 (0.920)					coding (948/1677 nt)	PP_2569	MHS family metabolite MFS transporter
*	?	NC_002947	= 2957835	57 (0.970)	4 (0.070)	4/252	NT	7.6%	coding (595/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
	?	NC_002947	= 2957926	42 (0.740)					coding (686/1494 nt)	PP_2589	aldehyde dehydrogenase family protein
*	?	NC_002947	= 2963491	50 (0.850)	3 (0.050)	3/252	NT	6.4%	coding (441/942 nt)	PP_2593	ferric siderophore ABC transporter permease
	?	NC_002947	= 2963537	40 (0.710)					coding (395/942 nt)	PP_2593	ferric siderophore ABC transporter permease
*	?	NC_002947	= 2978174	59 (1.000)	5 (0.090)	5/248	NT	7.8%	coding (181/1326 nt)	PP_2604	major facilitator family transporter
	?	NC_002947	= 2978192	62 (1.110)					coding (163/1326 nt)	PP_2604	major facilitator family transporter
*	?	NC_002947	= 2987261	28 (0.480)	4 (0.070)	3/254	NT	9.9%	coding (1138/2991 nt)	PP_2612	membrane protein
	?	NC_002947	4109346 =	46 (0.810)					coding (1168/2991 nt)	PP_3616	membrane protein
*	?	NC_002947	= 3003147	56 (0.950)	4 (0.100) +45 bp	3/172	NT	11.1%	coding (1188/1464 nt)	PP_2626	hypothetical protein
	?	NC_002947	4600160 =	42 (0.710)					coding (1112/1467 nt)	PP_4072	hypothetical protein
*	?	NC_002947	= 3016246	34 (0.580)	3 (0.050)	3/252	NT	8.6%	coding (169/2283 nt)	bcsB	cellulose synthase and translocator subunit
	?	NC_002947	= 3016268	31 (0.550)					coding (191/2283 nt)	bcsB	cellulose synthase and translocator subunit
*	?	NC_002947	= 3051712	70 (1.190)	5 (0.090)	4/250	NT	6.7%	coding (412/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3051725	73 (1.300)					coding (425/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 3052628	52 (0.880)	4 (0.070)	4/254	NT	7.4%	coding (1328/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 3052652	50 (0.880)					coding (1352/1899 nt)	PP_2664	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	3084183 =	38 (0.650)	4 (0.070)	3/254	NT	9.9%	coding (927/987 nt)	PP_2693	putative Dipeptidase
	?	NC_002947	3084213 =	36 (0.630)					coding (897/987 nt)	PP_2693	putative Dipeptidase
*	?	NC_002947	3146159 =	60 (1.020)	7 (0.120)	3/254	NT	11.7%	coding (582/987 nt)	PP_2761	ribose ABC transporter permease
	?	NC_002947	3146198 =	47 (0.820)					coding (621/987 nt)	PP_2761	ribose ABC transporter permease
*	?	NC_002947	= 3211031	31 (0.530)	3 (0.050)	3/250	NT	7.4%	coding (68/1254 nt)	PP_2815	hypothetical protein
	?	NC_002947	= 3211067	45 (0.800)					coding (104/1254 nt)	PP_2815	hypothetical protein
*	?	NC_002947	= 3217032	42 (0.710)	4 (0.070)	4/250	NT	8.5%	coding (2947/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	= 3217055	46 (0.820)					coding (2970/3129 nt)	mexD	multidrug RND transporter MexD
*	?	NC_002947	= 3239089	44 (0.750)	3 (0.060)	3/240	NT	7.5%	coding (220/1311 nt)	PP_2837	uronate transporter
	?	NC_002947	= 3239129	34 (0.630)					coding (260/1311 nt)	PP_2837	uronate transporter
*	?	NC_002947	= 3262119	49 (0.830)	3 (0.050)	3/248	NT	6.0%	coding (7/570 nt)	PP_2859	hypothetical protein
	?	NC_002947	= 3262145	48 (0.860)					coding (544/567 nt)	PP_2860	nicotinamide mononucleotide transporter
*	?	NC_002947	3293055 =	50 (0.850)	3 (0.050)	3/248	NT	5.8%	coding (2339/3675 nt)	PP_2893	hypothetical protein
	?	NC_002947	3293094 =	50 (0.900)					coding (2378/3675 nt)	PP_2893	hypothetical protein
*	?	NC_002947	3301817 =	68 (1.150)	7 (0.120)	6/252	NT	9.7%	coding (166/1704 nt)	glnS	glutamine‑‑tRNA ligase
	?	NC_002947	3301856 =	65 (1.150)					coding (205/1704 nt)	glnS	glutamine‑‑tRNA ligase
*	?	NC_002947	3319134 =	49 (0.830)	4 (0.080)	4/232	NT	9.4%	intergenic (‑98/+94)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
	?	NC_002947	3319193 =	34 (0.650)					intergenic (‑157/+35)	treSA/PP_2919	trehalose synthase A/LysR family transcriptional regulator
*	?	NC_002947	3320230 =	57 (0.970)	3 (0.050)	3/244	NT	5.8%	intergenic (‑85/‑36)	PP_2919/ybgL	LysR family transcriptional regulator/nitrogen‑containing compound degradation protein
	?	NC_002947	3320274 =	44 (0.800)					coding (9/759 nt)	ybgL	nitrogen‑containing compound degradation protein
*	?	NC_002947	3335433 =	50 (0.850)	3 (0.050)	3/254	NT	6.0%	coding (129/1704 nt)	PP_2932	amidase family protein
	?	NC_002947	3335479 =	46 (0.810)					coding (83/1704 nt)	PP_2932	amidase family protein
*	?	NC_002947	= 3398574	39 (0.660)	3 (0.050)	3/248	NT	6.4%	coding (232/438 nt)	aroQ‑III	type II 3‑dehydroquinate dehydratase
	?	NC_002947	= 3398596	51 (0.910)					coding (254/438 nt)	aroQ‑III	type II 3‑dehydroquinate dehydratase
*	?	NC_002947	3444269 =	41 (0.700)	4 (0.070)	4/246	NT	9.1%	coding (3028/3270 nt)	PP_3062	tail length determination protein
	?	NC_002947	3444330 =	41 (0.740)					coding (3089/3270 nt)	PP_3062	tail length determination protein
*	?	NC_002947	= 3496375	62 (1.050)	5 (0.090)	3/246	NT	7.5%	coding (429/576 nt)	PP_3100	hypothetical protein
	?	NC_002947	= 3496415	65 (1.180)					coding (389/576 nt)	PP_3100	hypothetical protein
*	?	NC_002947	= 3501146	64 (1.090)	4 (0.070)	4/248	NT	6.0%	intergenic (‑365/‑121)	PP_5566/PP_5567	hypothetical protein/hypothetical protein
	?	NC_002947	= 3501187	65 (1.170)					intergenic (‑406/‑80)	PP_5566/PP_5567	hypothetical protein/hypothetical protein
*	?	NC_002947	= 3522334	52 (0.880)	3 (0.050)	3/248	NT	5.6%	intergenic (+121/‑576)	PP_5584/PP_3113	hypothetical protein/transposase
	?	NC_002947	= 3522383	52 (0.930)					intergenic (+170/‑527)	PP_5584/PP_3113	hypothetical protein/transposase
*	?	NC_002947	= 3529839	35 (0.590)	3 (0.050)	3/246	NT	7.4%	coding (1656/3102 nt)	dnaEB	error‑prone DNA polymerase
	?	NC_002947	= 3529872	42 (0.760)					coding (1689/3102 nt)	dnaEB	error‑prone DNA polymerase
*	?	NC_002947	3545337 =	63 (1.070)	4 (0.070)	4/254	NT	5.9%	coding (98/2607 nt)	PP_3130	hypothetical protein
	?	NC_002947	3545385 =	66 (1.160)					coding (50/2607 nt)	PP_3130	hypothetical protein
*	?	NC_002947	3550919 =	42 (0.710)	3 (0.050)	3/244	NT	7.0%	coding (71/957 nt)	PP_3135	glycosyl transferase
	?	NC_002947	3551004 =	41 (0.750)					coding (156/957 nt)	PP_3135	glycosyl transferase
*	?	NC_002947	3567752 =	42 (0.710)	4 (0.070)	4/244	NT	9.1%	coding (309/1998 nt)	PP_3150	hypothetical protein
	?	NC_002947	3567805 =	41 (0.750)					coding (362/1998 nt)	PP_3150	hypothetical protein
*	?	NC_002947	3596508 =	57 (0.970)	4 (0.070)	4/250	NT	6.9%	coding (498/1098 nt)	nemA	FMN‑linked N‑ethylmaleimide reductase
	?	NC_002947	3596548 =	54 (0.960)					coding (458/1098 nt)	nemA	FMN‑linked N‑ethylmaleimide reductase
*	?	NC_002947	3604024 =	57 (0.970)	3 (0.050)	3/252	NT	5.0%	coding (630/900 nt)	PP_3179	LysR family transcriptional regulator
	?	NC_002947	3604065 =	58 (1.020)					coding (589/900 nt)	PP_3179	LysR family transcriptional regulator
*	?	NC_002947	3666650 =	52 (0.880)	5 (0.090)	5/248	NT	9.8%	coding (286/693 nt)	PP_3230	phosphoribosyl transferase domain‑containing protein
	?	NC_002947	3666728 =	43 (0.770)					coding (364/693 nt)	PP_3230	phosphoribosyl transferase domain‑containing protein
*	?	NC_002947	= 3684225	57 (0.970)	3 (0.050)	3/248	NT	5.6%	coding (521/1284 nt)	PP_3250	transporter
	?	NC_002947	= 3684249	47 (0.840)					coding (545/1284 nt)	PP_3250	transporter
*	?	NC_002947	3693099 =	51 (0.870)	4 (0.070)	4/254	NT	8.0%	coding (527/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
	?	NC_002947	3693147 =	43 (0.750)					coding (479/1044 nt)	PP_3259	acyl‑CoA dehydrogenase‑related protein
*	?	NC_002947	= 3696864	65 (1.100)	4 (0.070)	4/254	NT	5.7%	coding (109/225 nt)	PP_3262	metallothionein
	?	NC_002947	= 3696902	69 (1.210)					coding (147/225 nt)	PP_3262	metallothionein
*	?	NC_002947	3812495 =	52 (0.880)	6 (0.110)	6/250	NT	11.0%	coding (819/1185 nt)	PP_3368	MFS transporter
	?	NC_002947	3812545 =	47 (0.840)					coding (869/1185 nt)	PP_3368	MFS transporter
*	?	NC_002947	= 3817433	46 (0.780)	4 (0.070)	4/246	NT	7.6%	coding (416/2364 nt)	bamA‑II	outer membrane protein assembly factor
	?	NC_002947	= 3817501	54 (0.980)					coding (484/2364 nt)	bamA‑II	outer membrane protein assembly factor
*	?	NC_002947	3831831 =	56 (0.950)	3 (0.050)	3/256	NT	5.2%	coding (293/741 nt)	PP_3384	gluconate 2‑dehydrogenase gamma subunit
	?	NC_002947	3831889 =	55 (0.960)					coding (235/741 nt)	PP_3384	gluconate 2‑dehydrogenase gamma subunit
*	?	NC_002947	3832326 =	85 (1.440)	5 (0.090)	5/246	NT	6.2%	intergenic (‑203/‑148)	PP_3384/PP_3385	gluconate 2‑dehydrogenase gamma subunit/hypothetical protein
	?	NC_002947	3832356 =	71 (1.280)					intergenic (‑233/‑118)	PP_3384/PP_3385	gluconate 2‑dehydrogenase gamma subunit/hypothetical protein
*	?	NC_002947	= 3837200	54 (0.920)	5 (0.090)	4/248	NT	8.3%	coding (795/2673 nt)	PP_3388	hypothetical protein
	?	NC_002947	= 3837224	60 (1.080)					coding (819/2673 nt)	PP_3388	hypothetical protein
*	?	NC_002947	3843167 =	64 (1.090)	4 (0.070)	4/250	NT	6.1%	coding (310/525 nt)	PP_3392	hypothetical protein
	?	NC_002947	3843212 =	62 (1.100)					coding (265/525 nt)	PP_3392	hypothetical protein
*	?	NC_002947	= 3854146	66 (1.120)	3 (0.050)	3/248	NT	5.2%	coding (49/396 nt)	PP_3402	hypothetical protein
	?	NC_002947	= 3854217	46 (0.830)					intergenic (‑23/+98)	PP_3402/PP_3403	hypothetical protein/quercetin 2,3‑dioxygenase
*	?	NC_002947	3881637 =	57 (0.970)	8 (0.140)	7/246	NT	13.5%	coding (296/1416 nt)	oprN	multidrug RND transporter outer membrane protein OprN
	?	NC_002947	3881700 =	49 (0.890)					coding (359/1416 nt)	oprN	multidrug RND transporter outer membrane protein OprN
*	?	NC_002947	= 3899624	61 (1.040)	4 (0.070)	3/252	NT	7.0%	coding (32/1620 nt)	PP_3443	glyceraldehyde‑3‑phosphate dehydrogenase
	?	NC_002947	= 3899652	47 (0.830)					coding (60/1620 nt)	PP_3443	glyceraldehyde‑3‑phosphate dehydrogenase
*	?	NC_002947	= 3913878	50 (0.850)	3 (0.050)	3/244	NT	5.6%	coding (201/1302 nt)	PP_3453	sensor protein RstB
	?	NC_002947	= 3913915	54 (0.980)					coding (164/1302 nt)	PP_3453	sensor protein RstB
*	?	NC_002947	3921317 =	75 (1.270)	4 (0.070)	4/258	NT	5.5%	coding (449/1689 nt)	acs	acyl‑CoA synthetase
	?	NC_002947	3921350 =	64 (1.100)					coding (416/1689 nt)	acs	acyl‑CoA synthetase
*	?	NC_002947	= 3968879	NA (NA)	8 (0.140)	6/248	NT	14.7%	coding (1007/1179 nt)	PP_3498	transposase
	?	NC_002947	3968942 =	49 (0.830)					coding (1070/1179 nt)	PP_3498	transposase
*	?	NC_002947	= 3971392	NA (NA)	4 (0.070)	3/254	NT	NA	coding (1311/1536 nt)	PP_3501	transposase
	?	NC_002947	= 3971433	NA (NA)					coding (1352/1536 nt)	PP_3501	transposase
*	?	NC_002947	= 3971413	NA (NA)	4 (0.070)	3/250	NT	NA	coding (1332/1536 nt)	PP_3501	transposase
	?	NC_002947	= 3971468	NA (NA)					coding (1387/1536 nt)	PP_3501	transposase
*	?	NC_002947	3973637 =	48 (0.820)	4 (0.070)	4/246	NT	8.1%	coding (836/1326 nt)	PP_3503	sigma‑54 dependent transcriptional regulator
	?	NC_002947	3973689 =	46 (0.830)					coding (784/1326 nt)	PP_3503	sigma‑54 dependent transcriptional regulator
*	?	NC_002947	4013887 =	51 (0.870)	7 (0.130)	6/244	NT	13.5%	coding (229/519 nt)	PP_3541	MgtC family transporter
	?	NC_002947	4013931 =	42 (0.770)					coding (185/519 nt)	PP_3541	MgtC family transporter
*	?	NC_002947	4030724 =	57 (0.970)	4 (0.070)	4/256	NT	6.7%	coding (387/1770 nt)	PP_3554	acyl‑CoA dehydrogenase family protein
	?	NC_002947	4030785 =	55 (0.960)					coding (448/1770 nt)	PP_3554	acyl‑CoA dehydrogenase family protein
*	?	NC_002947	= 4066773	46 (0.780)	3 (0.050)	3/248	NT	6.3%	coding (2291/3108 nt)	mdtC	multidrug transporter membrane protein
	?	NC_002947	= 4066800	46 (0.830)					coding (2264/3108 nt)	mdtC	multidrug transporter membrane protein
*	?	NC_002947	4067770 =	50 (0.850)	3 (0.050)	3/252	NT	5.5%	coding (1294/3108 nt)	mdtC	multidrug transporter membrane protein
	?	NC_002947	4067810 =	55 (0.970)					coding (1254/3108 nt)	mdtC	multidrug transporter membrane protein
*	?	NC_002947	= 4095364	44 (0.750)	8 (0.140)	7/248	NT	15.7%	coding (120/765 nt)	PP_3603	GntR family transcriptional regulator
	?	NC_002947	= 4095423	44 (0.790)					coding (61/765 nt)	PP_3603	GntR family transcriptional regulator
*	?	NC_002947	= 4146460	41 (0.700)	3 (0.050)	3/246	NT	6.9%	coding (543/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4146507	43 (0.780)					coding (590/2184 nt)	PP_3651	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	4189262 =	50 (0.850)	4 (0.070)	4/246	NT	7.6%	coding (525/819 nt)	PP_5611	transcriptional regulator
	?	NC_002947	4189286 =	50 (0.900)					coding (549/819 nt)	PP_5611	transcriptional regulator
*	?	NC_002947	4202010 =	80 (1.360)	4 (0.070)	4/248	NT	5.5%	coding (5766/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4202047 =	63 (1.130)					coding (5729/6624 nt)	PP_3691	DNA helicase‑related protein
*	?	NC_002947	4207063 =	46 (0.780)	4 (0.070)	4/250	NT	9.3%	coding (713/6624 nt)	PP_3691	DNA helicase‑related protein
	?	NC_002947	4207100 =	34 (0.610)					coding (676/6624 nt)	PP_3691	DNA helicase‑related protein
*	?	NC_002947	= 4239611	37 (0.630)	3 (0.050)	3/248	NT	7.8%	coding (679/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	= 4239634	36 (0.650)					coding (656/900 nt)	PP_3717	LuxR family transcriptional regulator
*	?	NC_002947	= 4260580	56 (0.950)	3 (0.050)	3/248	NT	5.2%	coding (2182/2460 nt)	PP_3734	ABC transporter permease
	?	NC_002947	= 4260613	56 (1.000)					coding (2149/2460 nt)	PP_3734	ABC transporter permease
*	?	NC_002947	4284707 =	61 (1.040)	4 (0.070)	4/244	NT	7.8%	coding (112/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
	?	NC_002947	4284752 =	38 (0.690)					coding (157/849 nt)	hbd	3‑hydroxybutyryl‑CoA dehydrogenase
*	?	NC_002947	4290087 =	57 (0.970)	4 (0.070)	4/250	NT	6.8%	coding (2500/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	4290156 =	56 (1.000)					coding (2431/3468 nt)	PP_3761	two‑component system sensor histidine kinase/response regulator
*	?	NC_002947	= 4317684	45 (0.760)	3 (0.050)	3/244	NT	6.0%	coding (217/273 nt)	PP_5628	hypothetical protein
	?	NC_002947	= 4317713	52 (0.950)					coding (246/273 nt)	PP_5628	hypothetical protein
*	?	NC_002947	= 4327172	56 (0.950)	4 (0.070)	4/244	NT	6.9%	coding (140/1194 nt)	PP_3797	membrane protein
	?	NC_002947	= 4327198	56 (1.020)					coding (166/1194 nt)	PP_3797	membrane protein
*	?	NC_002947	4350267 =	39 (0.660)	5 (0.090)	4/248	NT	10.9%	coding (833/915 nt)	PP_3822	cytochrome c family protein
	?	NC_002947	4350307 =	45 (0.810)					coding (793/915 nt)	PP_3822	cytochrome c family protein
*	?	NC_002947	4351505 =	56 (0.950)	3 (0.060)	3/238	NT	5.4%	coding (245/654 nt)	PP_3823	cytochrome c‑type protein
	?	NC_002947	4351593 =	54 (1.010)					coding (157/654 nt)	PP_3823	cytochrome c‑type protein
*	?	NC_002947	4359674 =	43 (0.730)	3 (0.050)	3/248	NT	6.5%	coding (282/1446 nt)	PP_3834	hypothetical protein
	?	NC_002947	4359711 =	45 (0.810)					coding (245/1446 nt)	PP_3834	hypothetical protein
*	?	NC_002947	4390879 =	58 (0.980)	5 (0.090)	5/252	NT	8.3%	coding (46/192 nt) coding (288/297 nt)	PP_5640 PP_3866	hypothetical protein hypothetical protein
	?	NC_002947	4390934 =	55 (0.970)					coding (233/297 nt)	PP_3866	hypothetical protein
*	?	NC_002947	= 4417777	51 (0.870)	4 (0.070)	4/250	NT	7.5%	coding (99/270 nt)	PP_3906	hypothetical protein
	?	NC_002947	= 4417807	50 (0.890)					coding (129/270 nt)	PP_3906	hypothetical protein
*	?	NC_002947	4427633 =	69 (1.170)	6 (0.110)	3/248	NT	8.5%	intergenic (‑42/+113)	PP_t61/sohB	tRNA‑Cys/peptidase
	?	NC_002947	4427669 =	64 (1.150)					intergenic (‑78/+77)	PP_t61/sohB	tRNA‑Cys/peptidase
*	?	NC_002947	= 4480449	56 (0.950)	4 (0.070)	4/246	NT	6.8%	coding (318/1326 nt)	PP_3972	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 4480490	57 (1.030)					coding (359/1326 nt)	PP_3972	short‑chain dehydrogenase/reductase family oxidoreductase
*	?	NC_002947	4507779 =	52 (0.880)	4 (0.070)	4/246	NT	7.9%	coding (1002/1392 nt)	cysG	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
	?	NC_002947	4507834 =	45 (0.810)					coding (947/1392 nt)	cysG	multifunctional uroporphyrinogen‑III C‑methyltransferase/precorrin‑2 dehydrogenase/sirohydrochlorin ferrochelatase
*	?	NC_002947	= 4530896	53 (0.900)	3 (0.050)	3/250	NT	5.1%	coding (735/1962 nt)	topB	DNA topoisomerase III
	?	NC_002947	= 4530926	60 (1.070)					coding (765/1962 nt)	topB	DNA topoisomerase III
*	?	NC_002947	4536700 =	NA (NA)	4 (0.070)	3/252	NT	5.5%	coding (35/1533 nt)	PP_4025	transposase
	?	NC_002947	= 4627423	71 (1.210)					coding (81/1533 nt)	PP_4091	transposase
*	?	NC_002947	4585270 =	51 (0.870)	3 (0.050)	3/250	NT	6.4%	coding (314/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
	?	NC_002947	4585326 =	39 (0.690)					coding (258/1986 nt)	glgE	alpha‑1,4‑glucan:maltose‑1‑phosphate maltosyltransferase
*	?	NC_002947	= 4589170	39 (0.660)	3 (0.050)	3/250	NT	7.3%	coding (1035/1164 nt)	ivd	isovaleryl‑CoA dehydrogenase
	?	NC_002947	= 4589198	39 (0.690)					coding (1063/1164 nt)	ivd	isovaleryl‑CoA dehydrogenase
*	?	NC_002947	= 4601395	44 (0.750)	4 (0.070)	4/248	NT	8.6%	coding (497/633 nt)	PP_4073	hypothetical protein
	?	NC_002947	= 4601418	43 (0.770)					coding (474/633 nt)	PP_4073	hypothetical protein
*	?	NC_002947	4626515 =	74 (1.260)	5 (0.090)	3/246	NT	6.7%	coding (989/1533 nt)	PP_4091	transposase
	?	NC_002947	4626590 =	NA (NA)					coding (914/1533 nt)	PP_4091	transposase
*	?	NC_002947	4647557 =	35 (0.590)	4 (0.100)	3/184	NT	18.8%	intergenic (+10/+121)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	4647665 =	10 (0.240)					intergenic (+118/+13)	fusB/PP_4112	elongation factor G 2/sulfate transporter
*	?	NC_002947	= 4655084	58 (0.980)	4 (0.070)	3/250	NT	7.4%	intergenic (+236/‑22)	aceA/PP_4118	isocitrate lyase/membrane protein
	?	NC_002947	= 4655110	45 (0.800)					coding (5/696 nt)	PP_4118	membrane protein
*	?	NC_002947	4660236 =	62 (1.050)	4 (0.070)	4/250	NT	6.2%	coding (594/1362 nt)	nuoF	NADH‑quinone oxidoreductase subunit F
	?	NC_002947	4660277 =	61 (1.090)					coding (635/1362 nt)	nuoF	NADH‑quinone oxidoreductase subunit F
*	?	NC_002947	= 4679619	43 (0.730)	4 (0.070)	3/246	NT	9.0%	coding (338/447 nt)	rnhA	ribonuclease H
	?	NC_002947	= 4679643	41 (0.740)					coding (314/447 nt)	rnhA	ribonuclease H
*	?	NC_002947	= 4683186	64 (1.090)	4 (0.080)	3/218	NT	6.7%	intergenic (+45/‑176)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
	?	NC_002947	= 4683234	58 (1.180)					intergenic (+93/‑128)	mltD/PP_4146	membrane‑bound lytic murein transglycosylase D/peptide ABC transporter substrate‑binding protein
*	?	NC_002947	4700744 =	55 (0.930)	4 (0.080)	4/234	NT	7.5%	intergenic (‑57/+93)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
	?	NC_002947	4700816 =	50 (0.950)					intergenic (‑129/+21)	kdpD/kdpC	sensor protein/potassium‑transporting ATPase subunit C
*	?	NC_002947	4727724 =	72 (1.220)	5 (0.090)	5/250	NT	7.3%	intergenic (‑343/+61)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
	?	NC_002947	4727773 =	59 (1.050)					intergenic (‑392/+12)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
*	?	NC_002947	4738166 =	55 (0.930)	3 (0.050)	3/250	NT	5.6%	coding (204/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
	?	NC_002947	4738204 =	48 (0.850)					coding (166/1773 nt)	sdhA	succinate dehydrogenase flavoprotein subunit
*	?	NC_002947	4785208 =	65 (1.100)	4 (0.070)	4/248	NT	6.2%	coding (2106/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	4785288 =	60 (1.080)					coding (2026/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
*	?	NC_002947	4808174 =	1 (0.020)	14 (0.320)	9/192	NT	38.5%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988935	44 (1.020)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4808179	1 (0.020)	18 (0.340)	15/238	NT	40.5%	intergenic (‑288/‑267)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	5988765 =	52 (0.970)					intergenic (+59/‑487)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
*	?	NC_002947	= 4811054	55 (0.930)	4 (0.070)	4/248	NT	6.6%	coding (56/759 nt)	dsbG	protein disulfide isomerase
	?	NC_002947	= 4811113	62 (1.110)					coding (115/759 nt)	dsbG	protein disulfide isomerase
*	?	NC_002947	4819815 =	47 (0.800)	4 (0.070)	4/254	NT	9.5%	coding (11375/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4819867 =	31 (0.540)					coding (11323/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	= 4823818	40 (0.680)	3 (0.050)	3/252	NT	7.3%	coding (7372/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4823850	38 (0.670)					coding (7340/12954 nt)	pvdL	non‑ribosomal peptide synthetase
*	?	NC_002947	4845770 =	60 (1.020)	5 (0.090)	5/254	NT	8.0%	coding (520/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
	?	NC_002947	4845817 =	57 (1.000)					coding (567/2475 nt)	PP_4261	cation‑transporting P‑type ATPase
*	?	NC_002947	4856096 =	69 (1.170)	4 (0.080)	4/234	NT	6.3%	intergenic (+68/+128)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
	?	NC_002947	4856183 =	58 (1.100)					intergenic (+155/+41)	PP_4270/PP_5670	hypothetical protein/hypothetical protein
*	?	NC_002947	4870666 =	49 (0.830)	10 (0.210)	8/212	NT	21.4%	intergenic (+16/‑104)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
	?	NC_002947	4870736 =	34 (0.710)					intergenic (+86/‑34)	xdhB/xdhC	xanthine dehydrogenase subunit XdhB/xanthine dehydrogenase accessory factor
*	?	NC_002947	4880260 =	65 (1.100)	3 (0.050)	3/246	NT	5.1%	coding (870/1341 nt)	PP_4289	membrane protein
	?	NC_002947	4880298 =	50 (0.900)					coding (908/1341 nt)	PP_4289	membrane protein
*	?	NC_002947	= 4889595	33 (0.560)	3 (0.060)	3/208	NT	8.2%	intergenic (+41/‑112)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
	?	NC_002947	= 4889632	41 (0.880)					intergenic (+78/‑75)	hyi/glxR	hydroxypyruvate isomerase/2‑hydroxy‑3‑oxopropionate reductase
*	?	NC_002947	= 4896398	38 (0.650)	12 (0.240)	7/220	NT	28.3%	intergenic (+31/‑177)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 4896445	29 (0.590)					intergenic (+78/‑130)	PP_4304/sbp‑I	VIC family cation transporter/sulfate ABC transporter substrate‑binding protein
*	?	NC_002947	= 4903448	51 (0.870)	6 (0.110)	5/248	NT	10.8%	coding (679/1194 nt)	PP_4311	D‑amino acid dehydrogenase small subunit
	?	NC_002947	= 4903505	51 (0.910)					coding (622/1194 nt)	PP_4311	D‑amino acid dehydrogenase small subunit
*	?	NC_002947	= 4915748	57 (0.970)	3 (0.050)	3/248	NT	5.0%	coding (340/768 nt)	ccmC	protoheme IX reservoir complex subunit
	?	NC_002947	= 4915775	59 (1.060)					coding (313/768 nt)	ccmC	protoheme IX reservoir complex subunit
*	?	NC_002947	4919710 =	52 (0.880)	6 (0.110)	5/250	NT	10.8%	coding (119/2682 nt)	PP_4330	toxin‑like protein
	?	NC_002947	4919741 =	50 (0.890)					coding (150/2682 nt)	PP_4330	toxin‑like protein
*	?	NC_002947	4938681 =	67 (1.140)	5 (0.090)	4/246	NT	7.8%	coding (72/1059 nt)	ddlA	D‑alanine‑‑D‑alanine ligase A
	?	NC_002947	4938719 =	55 (0.990)					coding (34/1059 nt)	ddlA	D‑alanine‑‑D‑alanine ligase A
*	?	NC_002947	= 4961403	58 (0.980)	4 (0.070)	4/252	NT	6.2%	coding (1035/1356 nt)	atoC	two‑component system DNA‑binding transcriptional activator AtoC
	?	NC_002947	= 4961489	65 (1.150)					coding (949/1356 nt)	atoC	two‑component system DNA‑binding transcriptional activator AtoC
*	?	NC_002947	= 4982403	54 (0.920)	3 (0.050)	3/250	NT	5.9%	coding (279/702 nt)	flgD	flagellar basal‑body rod modification protein FlgD
	?	NC_002947	= 4982461	45 (0.800)					coding (221/702 nt)	flgD	flagellar basal‑body rod modification protein FlgD
*	?	NC_002947	= 4986305	53 (0.900)	3 (0.050)	3/250	NT	5.1%	coding (547/753 nt)	flgA	flagella basal body P‑ring formation protein
	?	NC_002947	= 4986339	61 (1.090)					coding (581/753 nt)	flgA	flagella basal body P‑ring formation protein
*	?	NC_002947	= 4986472	50 (0.850)	4 (0.070)	3/254	NT	7.2%	coding (714/753 nt)	flgA	flagella basal body P‑ring formation protein
	?	NC_002947	= 4986487	54 (0.950)					coding (729/753 nt)	flgA	flagella basal body P‑ring formation protein
*	?	NC_002947	5112165 =	52 (0.880)	7 (0.120)	5/250	NT	11.7%	coding (247/1068 nt)	rluB	23S rRNA pseudouridylate synthase B
	?	NC_002947	5112210 =	56 (1.000)					coding (202/1068 nt)	rluB	23S rRNA pseudouridylate synthase B
*	?	NC_002947	5129142 =	45 (0.760)	3 (0.050)	3/246	NT	6.0%	intergenic (‑38/+114)	PP_4515/recQ	MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase
	?	NC_002947	5129184 =	52 (0.940)					intergenic (‑80/+72)	PP_4515/recQ	MarR family transcriptional regulator/ATP‑dependent DNA 3'‑5' helicase
*	?	NC_002947	5140292 =	69 (1.170)	5 (0.090)	5/248	NT	7.6%	intergenic (+4/+376)	PP_4524/PP_4525	sodium‑solute symporter/LysR family transcriptional regulator
	?	NC_002947	5140348 =	57 (1.020)					intergenic (+60/+320)	PP_4524/PP_4525	sodium‑solute symporter/LysR family transcriptional regulator
*	?	NC_002947	= 5153334	40 (0.680)	5 (0.090)	5/252	NT	11.4%	intergenic (‑1411/+3)	PP_5696/PP_4537	hypothetical protein/membrane protein
	?	NC_002947	= 5153367	39 (0.690)					coding (846/876 nt)	PP_4537	membrane protein
*	?	NC_002947	5203884 =	79 (1.340)	5 (0.090)	4/252	NT	6.7%	intergenic (+148/‑312)	PP_4583/yajD	putative Peptidase/endonuclease
	?	NC_002947	5203916 =	64 (1.130)					intergenic (+180/‑280)	PP_4583/yajD	putative Peptidase/endonuclease
*	?	NC_002947	5292430 =	58 (0.980)	4 (0.070)	4/242	NT	6.5%	coding (420/888 nt)	mmsB	3‑hydroxyisobutyrate dehydrogenase
	?	NC_002947	5292484 =	61 (1.120)					coding (366/888 nt)	mmsB	3‑hydroxyisobutyrate dehydrogenase
*	?	NC_002947	5304443 =	74 (1.260)	4 (0.070)	4/248	NT	5.8%	coding (2809/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	5304517 =	61 (1.090)					coding (2735/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
*	?	NC_002947	5306311 =	60 (1.020)	3 (0.060)	3/242	NT	5.9%	coding (941/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	5306387 =	41 (0.750)					coding (865/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
*	?	NC_002947	5347295 =	48 (0.820)	3 (0.050)	3/252	NT	6.1%	coding (717/870 nt)	PP_4703	hypothetical protein
	?	NC_002947	5347336 =	47 (0.830)					coding (758/870 nt)	PP_4703	hypothetical protein
*	?	NC_002947	= 5404550	72 (1.220)	4 (0.070)	4/246	NT	5.7%	coding (670/801 nt)	PP_4748	amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 5404646	64 (1.160)					coding (574/801 nt)	PP_4748	amino acid ABC transporter substrate‑binding protein
*	?	NC_002947	= 5474952	51 (0.870)	3 (0.050)	3/244	NT	5.4%	intergenic (‑158/‑148)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
	?	NC_002947	= 5475004	58 (1.060)					intergenic (‑210/‑96)	proA/PP_4812	gamma‑glutamyl phosphate reductase/3‑methyladenine DNA glycosylase
*	?	NC_002947	5497383 =	65 (1.100)	4 (0.070)	4/250	NT	6.3%	coding (456/1212 nt)	cobL	precorrin‑6Y C(5,15)‑methyltransferase
	?	NC_002947	5497433 =	57 (1.010)					coding (506/1212 nt)	cobL	precorrin‑6Y C(5,15)‑methyltransferase
*	?	NC_002947	= 5518943	69 (1.170)	4 (0.070)	4/252	NT	6.0%	coding (787/789 nt)	PP_4852	AraC family transcriptional regulator
	?	NC_002947	= 5519011	58 (1.020)					coding (719/789 nt)	PP_4852	AraC family transcriptional regulator
*	?	NC_002947	5530084 =	42 (0.710)	6 (0.110)	5/246	NT	12.8%	coding (13/717 nt)	livF‑II	ABC transporter ATP‑binding protein
	?	NC_002947	5530122 =	42 (0.760)					coding (847/876 nt)	braF	ABC transporter ATP‑binding protein
*	?	NC_002947	5535636 =	56 (0.950)	4 (0.070)	4/256	NT	6.8%	coding (653/1209 nt)	pncB	nicotinate phosphoribosyltransferase
	?	NC_002947	5535685 =	55 (0.960)					coding (702/1209 nt)	pncB	nicotinate phosphoribosyltransferase
*	?	NC_002947	5543804 =	58 (0.980)	3 (0.050)	3/250	NT	5.4%	coding (339/864 nt)	PP_4875	membrane protein
	?	NC_002947	5543859 =	50 (0.890)					coding (284/864 nt)	PP_4875	membrane protein
*	?	NC_002947	5545321 =	NA (NA)	52 (0.900)	48/258	NT	100%	intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5621245	0 (0.000)					coding (19/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	5545533 =	1 (0.020)	5 (0.130) +45 bp	3/172	NT	19.0%	intergenic (‑673/+204)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	= 5974684	64 (1.090)					intergenic (+996/‑97)	PP_5726/PP_5727	hypothetical protein/hypothetical protein
*	?	NC_002947	= 5545666	NA (NA)	56 (0.970)	47/256	NT	100%	intergenic (‑806/+71)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB
	?	NC_002947	5621244 =	0 (0.000)					coding (20/774 nt)	PP_4939	hypothetical protein
*	?	NC_002947	5585676 =	49 (0.830)	5 (0.090)	3/250	NT	9.5%	coding (56/2259 nt)	parC	DNA topoisomerase IV subunit A
	?	NC_002947	5585713 =	48 (0.850)					coding (19/2259 nt)	parC	DNA topoisomerase IV subunit A
*	?	NC_002947	5594092 =	62 (1.050)	3 (0.060)	3/206	NT	7.9%	intergenic (‑39/+106)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
	?	NC_002947	5594185 =	21 (0.450)					intergenic (‑132/+13)	PP_4921/thiC	NCS1 family transporter/phosphomethylpyrimidine synthase
*	?	NC_002947	= 5597242	73 (1.240)	5 (0.090)	5/246	NT	7.1%	coding (743/1434 nt)	PP_4923	outer membrane efflux protein
	?	NC_002947	= 5597279	63 (1.140)					coding (780/1434 nt)	PP_4923	outer membrane efflux protein
*	?	NC_002947	= 5609685	51 (0.870)	3 (0.050)	3/252	NT	5.4%	coding (830/906 nt)	PP_4929	LysR family transcriptional regulator
	?	NC_002947	= 5609715	56 (0.990)					coding (800/906 nt)	PP_4929	LysR family transcriptional regulator
*	?	NC_002947	= 5630789	45 (0.760)	4 (0.070)	4/252	NT	7.9%	coding (319/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
	?	NC_002947	= 5630885	50 (0.880)					coding (415/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
*	?	NC_002947	5671615 =	32 (0.540)	4 (0.080)	4/214	NT	14.5%	intergenic (+34/‑136)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
	?	NC_002947	5671700 =	21 (0.440)					intergenic (+119/‑51)	PP_4978/PP_4979	hypothetical protein/substrate‑binding protein
*	?	NC_002947	5698727 =	61 (1.040)	5 (0.100)	4/228	NT	11.4%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698810 =	25 (0.490)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
*	?	NC_002947	= 5721453	43 (0.730)	3 (0.060)	3/220	NT	6.2%	intergenic (+34/+76)	PP_5021/glnQ	methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ
	?	NC_002947	= 5721496	55 (1.110)					intergenic (+77/+33)	PP_5021/glnQ	methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ
*	?	NC_002947	5727157 =	72 (1.220)	4 (0.070)	4/248	NT	5.3%	coding (1481/1680 nt)	opgG	glucans biosynthesis protein G
	?	NC_002947	5727201 =	74 (1.330)					coding (1437/1680 nt)	opgG	glucans biosynthesis protein G
*	?	NC_002947	5739649 =	56 (0.950)	3 (0.050)	3/244	NT	5.9%	coding (579/1365 nt)	hutF	formiminoglutamate deiminase
	?	NC_002947	5739743 =	44 (0.800)					coding (673/1365 nt)	hutF	formiminoglutamate deiminase
*	?	NC_002947	= 5740403	56 (0.950)	4 (0.070)	4/244	NT	7.5%	coding (1333/1365 nt)	hutF	formiminoglutamate deiminase
	?	NC_002947	= 5740534	46 (0.840)					coding (545/573 nt)	PP_5037	lipocalin family lipoprotein
*	?	NC_002947	5773685 =	53 (0.900)	3 (0.050)	3/254	NT	5.8%	coding (248/657 nt)	betI	choline‑responsive transcriptional repressor BetI
	?	NC_002947	5773720 =	46 (0.810)					coding (283/657 nt)	betI	choline‑responsive transcriptional repressor BetI
*	?	NC_002947	= 5798241	67 (1.140)	8 (0.140)	6/260	NT	10.7%	intergenic (‑342/+32)	gltB/PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
	?	NC_002947	= 5798265	67 (1.150)					intergenic (‑366/+8)	gltB/PP_5077	L‑glutamate synthase subunit alpha/hypothetical protein
*	?	NC_002947	= 5811000	58 (0.980)	4 (0.070)	4/252	NT	6.9%	coding (328/2220 nt)	priA	primosome assembly protein
	?	NC_002947	= 5811050	52 (0.920)					coding (378/2220 nt)	priA	primosome assembly protein
*	?	NC_002947	= 5816290	48 (0.820)	3 (0.050)	3/244	NT	5.7%	coding (100/624 nt)	PP_5092	NLP/P60 protein
	?	NC_002947	= 5816308	54 (0.980)					coding (118/624 nt)	PP_5092	NLP/P60 protein
*	?	NC_002947	= 5864831	45 (0.760)	4 (0.070)	4/248	NT	8.1%	coding (1320/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
	?	NC_002947	= 5864859	48 (0.860)					coding (1292/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
*	?	NC_002947	5874259 =	60 (1.020)	6 (0.110)	5/252	NT	9.7%	coding (250/426 nt)	PP_5148	membrane protein
	?	NC_002947	5874297 =	54 (0.950)					coding (212/426 nt)	PP_5148	membrane protein
*	?	NC_002947	= 5907249	68 (1.150)	5 (0.090)	4/244	NT	7.0%	coding (718/1095 nt)	spuE	spermidine/putrescine ABC transporter substrate‑binding protein
	?	NC_002947	= 5907291	70 (1.280)					coding (676/1095 nt)	spuE	spermidine/putrescine ABC transporter substrate‑binding protein
*	?	NC_002947	= 5914184	36 (0.610)	8 (0.170)	8/206	NT	19.2%	intergenic (+76/+77)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
	?	NC_002947	= 5914224	39 (0.840)					intergenic (+116/+37)	spuI/argA	glutamylpolyamine synthetase/amino acid N‑acetyltransferase
*	?	NC_002947	5915711 =	52 (0.880)	5 (0.090)	4/250	NT	9.4%	coding (1116/1143 nt)	argE	acetylornithine deacetylase
	?	NC_002947	5915748 =	47 (0.840)					coding (1079/1143 nt)	argE	acetylornithine deacetylase
*	?	NC_002947	= 5940404	58 (0.980)	3 (0.050)	3/248	NT	5.4%	coding (243/1113 nt)	yhhJ	translation‑like protein
	?	NC_002947	= 5940433	50 (0.900)					coding (272/1113 nt)	yhhJ	translation‑like protein
*	?	NC_002947	= 5977420	64 (1.090)	4 (0.070)	4/248	NT	5.5%	coding (1221/1491 nt)	yifB	ATP‑dependent chelatase
	?	NC_002947	= 5977454	76 (1.360)					coding (1255/1491 nt)	yifB	ATP‑dependent chelatase
*	?	NC_002947	5978244 =	63 (1.070)	3 (0.060)	3/242	NT	5.2%	coding (873/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	5978305 =	52 (0.960)					coding (812/993 nt)	PP_5241	LuxR family transcriptional regulator
*	?	NC_002947	5992771 =	70 (1.190)	4 (0.070)	4/248	NT	6.2%	coding (762/1263 nt)	opdB	proline‑specific outer membrane porin D
	?	NC_002947	5992841 =	54 (0.970)					coding (832/1263 nt)	opdB	proline‑specific outer membrane porin D
*	?	NC_002947	= 6012738	72 (1.220)	5 (0.090)	4/252	NT	6.6%	coding (1590/2010 nt)	rep	single‑stranded DNA dependent ATPase
	?	NC_002947	= 6012801	73 (1.290)					coding (1653/2010 nt)	rep	single‑stranded DNA dependent ATPase
*	?	NC_002947	= 6055152	51 (0.870)	4 (0.070)	4/246	NT	7.4%	coding (105/732 nt)	tonB	TonB energy transducing system subunit TonB
	?	NC_002947	= 6055192	52 (0.940)					coding (145/732 nt)	tonB	TonB energy transducing system subunit TonB
*	?	NC_002947	= 6058611	52 (0.880)	3 (0.050)	3/252	NT	5.7%	coding (1808/2079 nt)	recG	junction‑specific ATP‑dependent DNA helicase
	?	NC_002947	= 6058637	50 (0.880)					coding (1834/2079 nt)	recG	junction‑specific ATP‑dependent DNA helicase
*	?	NC_002947	= 6059392	69 (1.170)	4 (0.070)	3/246	NT	6.1%	coding (432/1404 nt)	PP_5311	signal transduction protein
	?	NC_002947	= 6059413	59 (1.070)					coding (453/1404 nt)	PP_5311	signal transduction protein
*	?	NC_002947	6062121 =	37 (0.630)	3 (0.050)	3/256	NT	6.2%	coding (583/1149 nt)	alkT	rubredoxin‑NAD(+) reductase
	?	NC_002947	6062168 =	55 (0.960)					coding (536/1149 nt)	alkT	rubredoxin‑NAD(+) reductase
*	?	NC_002947	6087558 =	67 (1.140)	4 (0.070)	4/252	NT	6.0%	intergenic (+9/‑221)	oruR/aphA	ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
	?	NC_002947	6087652 =	61 (1.080)					intergenic (+103/‑127)	oruR/aphA	ornithine utilization transcriptional regulator/acetylpolyamine aminohydrolase
*	?	NC_002947	= 6141453	58 (0.980)	3 (0.050)	3/244	NT	5.2%	coding (1189/3159 nt)	cusA	CzcA family RND family copper transporter
	?	NC_002947	= 6141475	55 (1.000)					coding (1211/3159 nt)	cusA	CzcA family RND family copper transporter
*	?	NC_002947	= 6171212	56 (0.950)	4 (0.070)	4/248	NT	6.9%	coding (1090/1836 nt)	glmS	L‑glutamine/D‑fructose‑6‑phosphate aminotransferase
	?	NC_002947	= 6171225	55 (0.990)					coding (1077/1836 nt)	glmS	L‑glutamine/D‑fructose‑6‑phosphate aminotransferase