mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,806,432 | 0 | A | C | 64.3% | 8.3 / 11.1 | 14 | T114T (ACA→ACC) | coaBC | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate‑‑cysteine ligase CoaBC |
| * | NZ_CP009273 | 3,348,814 | 0 | T | C | 55.6% | 14.8 / 21.5 | 18 | I244T (ATC→ACC) | gltB | glutamate synthase large subunit |
| * | NZ_CP009273 | 3,738,757 | 0 | A | C | 55.6% | 11.1 / 19.2 | 21 | L198F (TTA→TTC) | yiaN | 2,3‑diketo‑L‑gulonate transporter large permease YiaN |
| * | NZ_CP009273 | 4,058,951 | 0 | G | C | 55.6% | 5.9 / 10.3 | 9 | A59G (GCG→GGG) | yihO | MFS transporter |
| * | NZ_CP009273 | 2,074,570 | 0 | T | G | 53.8% | 7.5 / 12.3 | 13 | T58T (ACA→ACC) | sbmC | DNA gyrase inhibitor SbmC |
| * | NZ_CP009273 | 2,840,033 | 0 | T | G | 53.8% | 9.2 / 14.0 | 13 | T247P (ACC→CCC) | hycD | formate hydrogenlyase subunit HycD |
| * | NZ_CP009273 | 937,169 | 0 | T | G | 53.3% | 5.9 / 17.3 | 15 | V252G (GTG→GGG) | dmsA | dimethylsulfoxide reductase subunit A |
| * | NZ_CP009273 | 2,840,042 | 0 | G | T | 53.3% | 15.3 / 26.4 | 15 | Q244K (CAA→AAA) | hycD | formate hydrogenlyase subunit HycD |
| * | NZ_CP009273 | 3,291,244 | 0 | A | C | 52.9% | 10.0 / 13.2 | 17 | V85G (GTG→GGG) | yraQ | permease |
| * | NZ_CP009273 | 3,348,810 | 0 | A | C | 52.9% | 14.4 / 18.4 | 17 | T243P (ACC→CCC) | gltB | glutamate synthase large subunit |