mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,659,062 | 0 | C | A | 63.6% | 0.9 / 13.1 | 11 | A37S (GCG→TCG) | gadX | acid resistance transcriptional activator GadX |
| * | NZ_CP009273 | 390,745 | 0 | A | C | 58.3% | 5.7 / 10.6 | 12 | G333G (GGT→GGG) | ampH | D‑alanyl‑D‑alanine‑ carboxypeptidase/endopeptidase AmpH |
| * | NZ_CP009273 | 216,602 | 0 | A | C | 54.5% | 5.4 / 10.9 | 11 | *272E (TAA→GAA) | metQ | methionine ABC transporter substrate‑binding lipoprotein MetQ |
| * | NZ_CP009273 | 497,003 | 0 | T | C | 54.5% | 7.9 / 12.2 | 11 | intergenic (+118/+15) | gsk/ybaL | inosine/guanosine kinase/Kef family K(+) transporter |
| * | NZ_CP009273 | 2,380,347 | 0 | T | A | 54.5% | 3.1 / 10.2 | 11 | intergenic (+37/‑66) | yfbL/yfbM | M28 family metallopeptidase/YfbM family protein |
| * | NZ_CP009273 | 37,338 | 0 | T | G | 53.8% | 6.1 / 11.5 | 13 | T163P (ACC→CCC) | caiC | crotonobetaine/carnitine‑CoA ligase |
| * | NZ_CP009273 | 3,171,107 | 0 | C | A | 53.8% | 4.6 / 18.2 | 13 | E55* (GAG→TAG) | nudF | ADP‑ribose diphosphatase |
| * | NZ_CP009273 | 117,994 | 0 | A | T | 53.3% | 5.2 / 17.0 | 15 | L15L (CTT→CTA) | aroP | aromatic amino acid transporter AroP |