mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,921,519 | 0 | A | T | 57.1% | 4.2 / 17.0 | 14 | intergenic (+488/‑69) | ppnN/sdaC | nucleotide 5'‑monophosphate nucleosidase PpnN/HAAAP family serine/threonine permease SdaC |
| * | NZ_CP009273 | 3,806,632 | 0 | C | T | 57.1% | ‑3.2 / 11.0 | 14 | S181L (TCG→TTG) | coaBC | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate‑‑cysteine ligase CoaBC |
| * | NZ_CP009273 | 2,860,603 | 0 | A | T | 55.6% | ‑0.3 / 16.5 | 18 | V103E (GTA→GAA) | rpoS | RNA polymerase sigma factor RpoS |
| * | NZ_CP009273 | 349,993 | 0 | T | G | 54.5% | 18.4 / 26.8 | 22 | V526G (GTT→GGT) | prpE | propionate‑‑CoA ligase |
| * | NZ_CP009273 | 3,012,931 | 0 | A | C | 54.5% | 2.2 / 11.1 | 11 | T138P (ACA→CCA) | ssnA | putative aminohydrolase SsnA |
| * | NZ_CP009273 | 3,273,824 | 0 | T | A | 54.5% | 4.8 / 13.6 | 11 | C83* (TGT→TGA) | agaV | PTS N‑acetylgalactosamine transporter subunit IIB |
| * | NZ_CP009273 | 3,341,237 | 0 | T | G | 54.5% | 8.3 / 10.2 | 11 | V255G (GTG→GGG) | rapZ | RNase adapter RapZ |
| * | NZ_CP009273 | 4,527,910 | 0 | T | A | 54.5% | 5.3 / 13.4 | 11 | I225F (ATT→TTT) | nanM | N‑acetylneuraminate epimerase |
| * | NZ_CP009273 | 2,921,512 | 0 | C | T | 53.3% | 6.0 / 16.5 | 15 | intergenic (+481/‑76) | ppnN/sdaC | nucleotide 5'‑monophosphate nucleosidase PpnN/HAAAP family serine/threonine permease SdaC |
| * | NZ_CP009273 | 3,140,032 | 0 | A | C | 53.3% | 18.0 / 21.3 | 15 | V22G (GTT→GGT) | yghW | DUF2623 domain‑containing protein |