breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation annotation gene description
RA 49,765 C→T intergenic (+134/‑58) kefC → / → folA glutathione‑regulated potassium‑efflux system protein KefC/type 3 dihydrofolate reductase
RA 1,358,437 C→T L480F (CTT→TTT)  puuC → aldehyde dehydrogenase PuuC
MC JC 2,399,465 Δ7 bp coding (650‑656/939 nt) lrhA ← transcriptional regulator LrhA

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3615 3659 45 3 [1] [0] 2 thrB homoserine kinase
* * ÷ NZ_CP009273 17046 17067 22 2 [1] [1] 2 mokC/nhaA type I toxin‑antitoxin system toxin MokC/Na+/H+ antiporter NhaA
* * ÷ NZ_CP009273 71151 71177 27 2 [1] [1] 2 thiB thiamine ABC transporter substrate binding subunit
* * ÷ NZ_CP009273 80557 80592 36 2 [1] [1] 2 leuL/leuO leu operon leader peptide/transcriptional regulator LeuO
* * ÷ NZ_CP009273 234802 234821 20 2 [1] [1] 2 BW25113_RS01095 hypothetical protein
* * ÷ NZ_CP009273 356981 357574 594 3 [0] [1] 2 [lacA] [lacA]
* * ÷ NZ_CP009273 380628 380668 41 3 [1] [1] 4 BW25113_RS01880/tauA PIG‑L family deacetylase/taurine ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 380899 380906 8 2 [1] [0] 2 tauA taurine ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 385409 385521 113 2 [1] [1] 2 hemB/BW25113_RS01915 porphobilinogen synthase/outer membrane autotransporter barrel domain‑containing protein
* * ÷ NZ_CP009273 396782 396824 43 2 [1] [1] 2 BW25113_RS25915/iraP hypothetical protein/anti‑adapter protein IraP
* * ÷ NZ_CP009273 418121 418153 33 3 [1] [1] 2 malZ maltodextrin glucosidase
* * ÷ NZ_CP009273 419019 419026 8 2 [0] [1] 6 malZ maltodextrin glucosidase
* * ÷ NZ_CP009273 499948 499981 34 3 [1] [0] 2 fsr fosmidomycin MFS transporter
* * ÷ NZ_CP009273 511667 511672 6 2 [1] [0] 2 fetA iron ABC transporter ATP‑binding protein FetA
* * ÷ NZ_CP009273 518489 518643 155 2 [1] [1] 2 ybbP/rhsD ABC transporter permease/rhs element protein RhsD
* * ÷ NZ_CP009273 524116 524156 41 2 [1] [0] 3 BW25113_RS24960 hypothetical protein
* * ÷ NZ_CP009273 525341 525362 22 2 [1] [1] 2 ylbG helix‑turn‑helix domain‑containing protein
* * ÷ NZ_CP009273 532860 532899 40 2 [1] [0] 2 glxR 2‑hydroxy‑3‑oxopropionate reductase
* * ÷ NZ_CP009273 536626 536706 81 2 [1] [1] 2 ybbY uracil/xanthine transporter
* * ÷ NZ_CP009273 541900 541943 44 2 [1] [0] 2 allD/fdrA ureidoglycolate dehydrogenase/acyl‑CoA synthetase FdrA
* * ÷ NZ_CP009273 564159 564204 46 4 [1] [1] 2 BW25113_RS25485 hypothetical protein
* * ÷ NZ_CP009273 566166 566198 33 2 [1] [0] 2 ybcK/ybcL recombinase family protein/Raf kinase inhibitor‑like protein YbcL
* * ÷ NZ_CP009273 572304 572362 59 2 [1] [1] 2 BW25113_RS02855/essD porin/phage lysis protein EssD
* * ÷ NZ_CP009273 578861 578931 71 2 [1] [0] 2 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 578970 579043 74 2 [0] [1] 2 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 579507 579772 266 3 [1] [1] 2 appY DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 586870 586897 28 2 [0] [1] 2 nrfB cyclic di‑3',5'‑guanylate‑activated glycosyltransferase NrfB
* * ÷ NZ_CP009273 587962 588009 48 3 [1] [1] 3 nrfB cyclic di‑3',5'‑guanylate‑activated glycosyltransferase NrfB
* * ÷ NZ_CP009273 590310 590335 26 2 [1] [0] 2 cusR copper response regulator transcription factor CusR
* * ÷ NZ_CP009273 600293 600298 6 2 [1] [0] 2 nfsB oxygen‑insensitive NAD(P)H nitroreductase
* * ÷ NZ_CP009273 602528 602606 79 2 [1] [1] 2 ybdK YbdK family carboxylate‑amine ligase
* * ÷ NZ_CP009273 613567 613587 21 2 [1] [0] 2 entF/wzz(fepE) enterobactin non‑ribosomal peptide synthetase EntF/LPS O‑antigen length regulator Wzz(fepE)
* * ÷ NZ_CP009273 614930 614938 9 2 [1] [0] 3 fepC iron‑enterobactin ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 619466 619535 70 2 [1] [1] 3 fepB Fe2+‑enterobactin ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 631891 631973 83 2 [1] [1] 3 ybdN phosphoadenosine phosphosulfate reductase
* * ÷ NZ_CP009273 647590 647617 28 2 [1] [1] 2 citC/dpiB [citrate (pro‑3S)‑lyase] ligase/sensor histidine kinase DpiB
* * ÷ NZ_CP009273 648490 648499 10 2 [1] [0] 2 dpiB sensor histidine kinase DpiB
* * ÷ NZ_CP009273 651578 651620 43 2 [1] [1] 3 dcuC/pagP anaerobic C4‑dicarboxylate transporter DcuC/lipid IV(A) palmitoyltransferase PagP
* * ÷ NZ_CP009273 656811 656822 12 2 [1] [1] 2 ybeF YbeF family transcriptional regulator
* * ÷ NZ_CP009273 659161 659179 19 3 [1] [1] 2 dacA D‑alanyl‑D‑alanine carboxypeptidase DacA
* * ÷ NZ_CP009273 676022 676034 13 2 [0] [1] 2 djlC co‑chaperone DjlC
* * ÷ NZ_CP009273 678801 678848 48 2 [1] [1] 3 hscC molecular chaperone HscC
* * ÷ NZ_CP009273 682497 682553 57 2 [1] [1] 2 gltI glutamate/aspartate ABC transporter substrate‑binding protein GltI
* * ÷ NZ_CP009273 703328 703338 11 3 [1] [0] 2 glnS/chiP glutamine‑‑tRNA ligase/chitoporin
* * ÷ NZ_CP009273 710755 710765 11 2 [0] [1] 2 pgm/BW25113_RS03560 phosphoglucomutase (alpha‑D‑glucose‑1,6‑bisphosphate‑dependent)/lipoprotein
* * ÷ NZ_CP009273 712094 712172 79 2 [1] [1] 3 BW25113_RS03565/BW25113_RS03570 DUF2625 domain‑containing protein/winged helix‑turn‑helix domain‑containing protein
* * ÷ NZ_CP009273 716252 716258 7 2 [0] [0] 2 BW25113_RS26090 leader peptide SpeFL
* * ÷ NZ_CP009273 716353 716541 189 2 [1] [1] 3 [kdpE] [kdpE]
* * ÷ NZ_CP009273 719304 719381 78 2 [1] [1] 3 kdpD two‑component system sensor histidine kinase KdpD
* * ÷ NZ_CP009273 724632 724667 36 2 [1] [1] 2 ybfA YbfA family protein
* * ÷ NZ_CP009273 729357 729409 53 2 [1] [1] 3 BW25113_RS03630 hypothetical protein
* * ÷ NZ_CP009273 729469 729472 4 2 [0] [0] 2 BW25113_RS03630 hypothetical protein
* * ÷ NZ_CP009273 731547 731875 329 2 [1] [1] 2 [BW25113_RS03640] [BW25113_RS03640]
* * ÷ NZ_CP009273 743261 743276 16 2 [1] [0] 2 abrB/ybgO AbrB family transcriptional regulator/fimbrial protein
* * ÷ NZ_CP009273 748441 748453 13 2 [0] [0] 2 ybgD/gltA fimbrial protein/citrate synthase
* * ÷ NZ_CP009273 748526 748648 123 3 [1] [1] 2 [gltA] [gltA]
* * ÷ NZ_CP009273 753725 753752 28 2 [0] [1] 2 sdhB succinate dehydrogenase iron‑sulfur subunit SdhB
* * ÷ NZ_CP009273 761368 761414 47 2 [1] [0] 3 mngR/mngA mannosyl‑D‑glycerate transport/metabolism system transcriptional repressor MngR/PTS 2‑O‑a‑mannosyl‑D‑glycerate transporter subunit IIABC
* * ÷ NZ_CP009273 763585 763596 12 2 [1] [1] 2 mngB mannosylglycerate hydrolase
* * ÷ NZ_CP009273 772375 772385 11 2 [0] [0] 2 tolA cell envelope integrity protein TolA
* * ÷ NZ_CP009273 779778 779859 82 2 [1] [1] 2 zitB CDF family zinc transporter ZitB
* * ÷ NZ_CP009273 779973 780033 61 2 [1] [0] 2 zitB CDF family zinc transporter ZitB
* * ÷ NZ_CP009273 786988 787051 64 3 [1] [1] 2 galE UDP‑glucose 4‑epimerase GalE
* * ÷ NZ_CP009273 792055 792098 44 2 [1] [1] 2 modC molybdenum ABC transporter ATP‑binding protein ModC
* * ÷ NZ_CP009273 805393 805419 27 2 [0] [1] 4 bioB biotin synthase BioB
* * ÷ NZ_CP009273 805510 805588 79 2 [1] [1] 2 bioB biotin synthase BioB
* * ÷ NZ_CP009273 818908 818921 14 2 [0] [1] 2 clsB cardiolipin synthase ClsB
* * ÷ NZ_CP009273 819333 819380 48 2 [1] [1] 2 ybhP endonuclease/exonuclease/phosphatase family protein
* * ÷ NZ_CP009273 819471 819482 12 2 [1] [1] 2 ybhP endonuclease/exonuclease/phosphatase family protein
* * ÷ NZ_CP009273 828462 828511 50 2 [0] [1] 2 ybiA/dinG N‑glycosidase YbiA/ATP‑dependent DNA helicase DinG
* * ÷ NZ_CP009273 829182 829222 41 2 [1] [1] 2 dinG ATP‑dependent DNA helicase DinG
* * ÷ NZ_CP009273 830575 830601 27 2 [1] [1] 3 dinG ATP‑dependent DNA helicase DinG
* * ÷ NZ_CP009273 830692 830696 5 3 [1] [0] 2 dinG/ybiB ATP‑dependent DNA helicase DinG/DNA‑binding protein YbiB
* * ÷ NZ_CP009273 835628 835678 51 2 [1] [1] 2 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 844510 844512 3 2 [0] [0] 2 dps/rhtA DNA starvation/stationary phase protection protein Dps/threonine/homoserine exporter RhtA
* * ÷ NZ_CP009273 853902 853923 22 2 [1] [1] 2 ybiU DUF1479 domain‑containing protein
* * ÷ NZ_CP009273 856258 856348 91 2 [1] [1] 2 ybiW glycyl radical protein
* * ÷ NZ_CP009273 859810 859859 50 2 [1] [1] 2 [moeB] [moeB]
* * ÷ NZ_CP009273 860858 860870 13 2 [1] [0] 2 moeA molybdopterin molybdotransferase MoeA
* * ÷ NZ_CP009273 860948 860956 9 2 [0] [1] 2 moeA molybdopterin molybdotransferase MoeA
* * ÷ NZ_CP009273 861047 861076 30 2 [1] [0] 2 moeA molybdopterin molybdotransferase MoeA
* * ÷ NZ_CP009273 862659 862756 98 2 [1] [1] 2 iaaA beta‑aspartyl‑peptidase
* * ÷ NZ_CP009273 868409 868479 71 2 [1] [1] 2 [pdeI] [pdeI]
* * ÷ NZ_CP009273 871562 871660 99 2 [0] [1] 2 dgcI GGDEF domain‑containing protein
* * ÷ NZ_CP009273 871776 871823 48 2 [1] [0] 3 dgcI GGDEF domain‑containing protein
* * ÷ NZ_CP009273 879741 879815 75 2 [1] [1] 2 mdfA multidrug efflux MFS transporter MdfA
* * ÷ NZ_CP009273 880797 880821 25 2 [1] [1] 2 ybjI 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase
* * ÷ NZ_CP009273 886863 886905 43 2 [1] [1] 2 nfsA nitroreductase NfsA
* * ÷ NZ_CP009273 889822 889839 18 2 [1] [1] 2 potF spermidine/putrescine ABC transporter substrate‑binding protein PotF
* * ÷ NZ_CP009273 903023 903099 77 2 [1] [1] 4 ybjT SDR family oxidoreductase
* * ÷ NZ_CP009273 904538 904554 17 3 [1] [1] 4 ltaE low‑specificity L‑threonine aldolase
* * ÷ NZ_CP009273 910910 910924 15 2 [0] [0] 2 aqpZ aquaporin Z
* * ÷ NZ_CP009273 917537 917581 45 2 [1] [1] 2 macB macrolide ABC transporter ATP‑binding protein/permease MacB
* * ÷ NZ_CP009273 930425 930456 32 2 [1] [0] 2 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 930687 930710 24 3 [1] [0] 2 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 930974 930995 22 3 [1] [1] 2 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 932378 932429 52 3 [1] [1] 3 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 933446 933485 40 2 [1] [0] 2 [rarA] [rarA]
* * ÷ NZ_CP009273 933527 933539 13 2 [0] [1] 2 rarA replication‑associated recombination protein RarA
* * ÷ NZ_CP009273 953610 953667 58 3 [1] [1] 2 serC 3‑phosphoserine/phosphohydroxythreonine transaminase
* * ÷ NZ_CP009273 954608 954633 26 2 [1] [1] 3 aroA 3‑phosphoshikimate 1‑carboxyvinyltransferase
* * ÷ NZ_CP009273 960981 960991 11 3 [1] [0] 2 ycaI ComEC family protein
* * ÷ NZ_CP009273 961115 961218 104 2 [1] [1] 2 ycaI ComEC family protein
* * ÷ NZ_CP009273 968284 968460 177 3 [1] [1] 2 elyC envelope biogenesis factor ElyC
* * ÷ NZ_CP009273 969088 969132 45 2 [0] [1] 2 cmoM tRNA uridine 5‑oxyacetic acid(34) methyltransferase CmoM
* * ÷ NZ_CP009273 971600 971659 60 2 [1] [1] 2 mukE chromosome partition protein MukE
* * ÷ NZ_CP009273 974604 974625 22 2 [1] [1] 2 mukB chromosome partition protein MukB
* * ÷ NZ_CP009273 982690 982746 57 2 [1] [1] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 982832 982857 26 2 [1] [1] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 988198 988212 15 2 [1] [0] 2 pepN aminopeptidase N
* * ÷ NZ_CP009273 988941 988949 9 3 [0] [1] 2 ssuB aliphatic sulfonates ABC transporter ATP‑binding protein
* * ÷ NZ_CP009273 990644 990651 8 2 [0] [0] 2 ssuD FMNH2‑dependent alkanesulfonate monooxygenase
* * ÷ NZ_CP009273 993029 993080 52 3 [0] [1] 2 ssuE/elfA NADPH‑dependent FMN reductase/fimbrial protein
* * ÷ NZ_CP009273 997988 998006 19 3 [1] [0] 2 elfG fimbrial protein
* * ÷ NZ_CP009273 1011639 1011657 19 2 [1] [1] 3 fabA bifunctional 3‑hydroxydecanoyl‑ACP dehydratase/trans‑2‑decenoyl‑ACP isomerase
* * ÷ NZ_CP009273 1012088 1012088 1 5 [0] [0] 3 ycbZ Lon protease family protein
* * ÷ NZ_CP009273 1013382 1013466 85 3 [1] [0] 2 ycbZ Lon protease family protein
* * ÷ NZ_CP009273 1021317 1021328 12 2 [0] [0] 2 helD DNA helicase IV
* * ÷ NZ_CP009273 1037531 1037541 11 3 [1] [1] 2 etk tyrosine‑protein kinase
* * ÷ NZ_CP009273 1040098 1040114 17 2 [1] [0] 2 etp protein‑tyrosine‑phosphatase Etp
* * ÷ NZ_CP009273 1053846 1053871 26 2 [1] [1] 2 torC pentaheme c‑type cytochrome TorC
* * ÷ NZ_CP009273 1055733 1055777 45 2 [1] [1] 3 torA trimethylamine‑N‑oxide reductase TorA
* * ÷ NZ_CP009273 1059177 1059202 26 2 [1] [1] 2 cbpA curved DNA‑binding protein
* * ÷ NZ_CP009273 1061525 1061543 19 2 [1] [1] 2 agp bifunctional glucose‑1‑phosphatase/inositol phosphatase
* * ÷ NZ_CP009273 1065495 1065551 57 3 [0] [1] 2 rutF pyrimidine utilization flavin reductase protein F
* * ÷ NZ_CP009273 1071748 1071796 49 2 [1] [1] 2 putA trifunctional transcriptional regulator/proline dehydrogenase/L‑glutamate gamma‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1075963 1076007 45 6 [1] [0] 2 putP sodium/proline symporter PutP
* * ÷ NZ_CP009273 1077551 1077571 21 2 [1] [0] 2 BW25113_RS05295 FTR1 family protein
* * ÷ NZ_CP009273 1080075 1080134 60 2 [1] [1] 2 [efeB] [efeB]
* * ÷ NZ_CP009273 1098869 1098955 87 2 [1] [1] 3 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1099302 1099379 78 2 [1] [1] 2 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1099966 1099999 34 2 [1] [1] 2 csgA curli major subunit CsgA
* * ÷ NZ_CP009273 1108715 1108743 29 4 [1] [1] 2 mdoH glucans biosynthesis glucosyltransferase MdoH
* * ÷ NZ_CP009273 1116493 1116572 80 3 [1] [0] 3 bssS/dinI biofilm formation regulator BssS/DNA damage‑inducible protein I
* * ÷ NZ_CP009273 1126855 1126948 94 2 [1] [1] 2 [flgB]–[flgC] [flgB],[flgC]
* * ÷ NZ_CP009273 1130364 1130393 30 3 [1] [1] 2 flgG flagellar basal‑body rod protein FlgG
* * ÷ NZ_CP009273 1136213 1136260 48 3 [1] [1] 2 flgL flagellar hook‑associated protein FlgL
* * ÷ NZ_CP009273 1144083 1144098 16 2 [1] [0] 3 plsX phosphate acyltransferase PlsX
* * ÷ NZ_CP009273 1145720 1145768 49 2 [1] [0] 3 fabD ACP S‑malonyltransferase
* * ÷ NZ_CP009273 1159755 1159765 11 2 [1] [1] 2 nagZ beta‑N‑acetylhexosaminidase
* * ÷ NZ_CP009273 1161491 1161534 44 2 [0] [1] 2 ycfP/ndh alpha/beta hydrolase YcfP/NADH‑quinone dehydrogenase
* * ÷ NZ_CP009273 1165746 1165843 98 2 [1] [1] 2 [ldtC] [ldtC]
* * ÷ NZ_CP009273 1169554 1169612 59 2 [1] [1] 2 ycfT acyltransferase family protein
* * ÷ NZ_CP009273 1172182 1172316 135 2 [1] [1] 2 lolD lipoprotein‑releasing ABC transporter ATP‑binding protein LolD
* * ÷ NZ_CP009273 1176065 1176112 48 2 [1] [0] 2 ycfZ TPM domain‑containing protein
* * ÷ NZ_CP009273 1176199 1176209 11 2 [0] [0] 6 ycfZ TPM domain‑containing protein
* * ÷ NZ_CP009273 1177669 1177724 56 2 [1] [1] 3 potD spermidine/putrescine ABC transporter substrate‑binding protein PotD
* * ÷ NZ_CP009273 1182595 1182603 9 2 [1] [1] 2 roxA [50S ribosomal protein L16]‑arginine 3‑hydroxylase
* * ÷ NZ_CP009273 1182999 1183063 65 2 [1] [1] 3 roxA [50S ribosomal protein L16]‑arginine 3‑hydroxylase
* * ÷ NZ_CP009273 1183300 1183456 157 2 [1] [1] 2 roxA [50S ribosomal protein L16]‑arginine 3‑hydroxylase
* * ÷ NZ_CP009273 1187549 1187574 26 2 [1] [1] 3 hflD high frequency lysogenization protein HflD
* * ÷ NZ_CP009273 1188616 1188657 42 2 [1] [1] 2 mnmA tRNA 2‑thiouridine(34) synthase MnmA
* * ÷ NZ_CP009273 1189077 1189092 16 3 [1] [0] 2 mnmA tRNA 2‑thiouridine(34) synthase MnmA
* * ÷ NZ_CP009273 1191167 1191177 11 3 [0] [0] 5 icd NADP‑dependent isocitrate dehydrogenase
* * ÷ NZ_CP009273 1192433 1192465 33 2 [1] [0] 2 ymfD class I SAM‑dependent methyltransferase
* * ÷ NZ_CP009273 1193140 1193206 67 2 [1] [1] 2 BW25113_RS05920 hypothetical protein
* * ÷ NZ_CP009273 1193741 1193751 11 2 [0] [0] 2 BW25113_RS05920/lit hypothetical protein/cell death peptidase Lit
* * ÷ NZ_CP009273 1193811 1193834 24 2 [0] [1] 2 BW25113_RS05920/lit hypothetical protein/cell death peptidase Lit
* * ÷ NZ_CP009273 1199849 1199873 25 2 [0] [1] 2 [BW25113_RS26105]–[BW25113_RS05965] [BW25113_RS26105],[BW25113_RS05965]
* * ÷ NZ_CP009273 1206654 1206772 119 2 [1] [1] 2 mcrA/BW25113_RS23640 5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase
* * ÷ NZ_CP009273 1207520 1207613 94 2 [1] [0] 2 iraM/BW25113_RS25985 anti‑adapter protein IraM/protein YmgK
* * ÷ NZ_CP009273 1207746 1207839 94 2 [1] [1] 2 [BW25113_RS25985] [BW25113_RS25985]
* * ÷ NZ_CP009273 1207930 1207978 49 2 [1] [1] 3 BW25113_RS25985/BW25113_RS25535 protein YmgK/hypothetical protein
* * ÷ NZ_CP009273 1209582 1209605 24 3 [1] [1] 2 bluR/bluF DNA‑binding transcriptional repressor BluR/blue light‑responsive regulator BluF
* * ÷ NZ_CP009273 1209741 1209781 41 2 [0] [1] 2 bluF blue light‑responsive regulator BluF
* * ÷ NZ_CP009273 1212076 1212145 70 2 [0] [1] 3 [ariR] [ariR]
* * ÷ NZ_CP009273 1212285 1212293 9 2 [1] [1] 2 BW25113_RS06060 hypothetical protein
* * ÷ NZ_CP009273 1215355 1215389 35 2 [0] [1] 2 BW25113_RS06070/BW25113_RS25990 hypothetical protein/autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1215987 1216047 61 2 [1] [1] 2 BW25113_RS25990 autotransporter outer membrane beta‑barrel domain‑containing protein
* * ÷ NZ_CP009273 1225258 1225323 66 2 [1] [0] 2 hlyE hemolysin HlyE
* * ÷ NZ_CP009273 1225595 1225600 6 2 [0] [1] 2 hlyE hemolysin HlyE
* * ÷ NZ_CP009273 1225912 1225993 82 2 [1] [1] 2 hlyE/umuD hemolysin HlyE/translesion error‑prone DNA polymerase V autoproteolytic subunit
* * ÷ NZ_CP009273 1229742 1229779 38 2 [1] [0] 2 nhaB Na(+)/H(+) antiporter NhaB
* * ÷ NZ_CP009273 1230106 1230149 44 2 [1] [1] 2 nhaB Na(+)/H(+) antiporter NhaB
* * ÷ NZ_CP009273 1231896 1231905 10 4 [0] [0] 2 ycgB SpoVR family protein
* * ÷ NZ_CP009273 1232807 1232813 7 2 [0] [0] 2 ycgB/dadA SpoVR family protein/D‑amino acid dehydrogenase
* * ÷ NZ_CP009273 1235472 1235579 108 2 [1] [1] 2 dadX/cvrA catabolic alanine racemase DadX/potassium/proton antiporter
* * ÷ NZ_CP009273 1238774 1238794 21 2 [0] [1] 2 emtA membrane‑bound lytic murein transglycosylase EmtA
* * ÷ NZ_CP009273 1238992 1239036 45 3 [1] [1] 3 emtA membrane‑bound lytic murein transglycosylase EmtA
* * ÷ NZ_CP009273 1240632 1240676 45 2 [1] [1] 2 BW25113_RS06225 hypothetical protein
* * ÷ NZ_CP009273 1247144 1247172 29 2 [1] [1] 2 dhaR dihydroxyacetone kinase operon transcriptional regulator DhaR
* * ÷ NZ_CP009273 1253727 1253765 39 2 [1] [1] 2 pth aminoacyl‑tRNA hydrolase
* * ÷ NZ_CP009273 1258820 1258858 39 2 [1] [1] 2 lolB lipoprotein insertase outer membrane protein LolB
* * ÷ NZ_CP009273 1267307 1267381 75 2 [1] [1] 2 chaA/chaB sodium‑potassium/proton antiporter ChaA/putative cation transport regulator ChaB
* * ÷ NZ_CP009273 1274733 1274755 23 2 [1] [1] 2 narK nitrate transporter NarK
* * ÷ NZ_CP009273 1276682 1276691 10 3 [1] [0] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1276977 1276983 7 2 [0] [0] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1277247 1277282 36 2 [1] [0] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1277838 1277887 50 2 [1] [1] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1278554 1278578 25 2 [1] [1] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1284795 1284804 10 2 [1] [1] 3 rssA patatin‑like phospholipase RssA
* * ÷ NZ_CP009273 1285005 1285050 46 2 [0] [1] 2 rssA patatin‑like phospholipase RssA
* * ÷ NZ_CP009273 1299923 1299950 28 2 [1] [1] 2 oppD murein tripeptide/oligopeptide ABC transporter ATP‑binding protein OppD
* * ÷ NZ_CP009273 1302886 1302940 55 2 [1] [0] 2 [cls] [cls]
* * ÷ NZ_CP009273 1306005 1306096 92 2 [1] [1] 2 [tonB] [tonB]
* * ÷ NZ_CP009273 1308077 1308153 77 2 [1] [1] 3 BW25113_RS25555/ompW YkgJ family cysteine cluster protein/outer membrane protein OmpW
* * ÷ NZ_CP009273 1308646 1308676 31 2 [1] [1] 2 ompW outer membrane protein OmpW
* * ÷ NZ_CP009273 1310317 1310453 137 2 [1] [0] 2 yciG/trpA general stress protein/tryptophan synthase subunit alpha
* * ÷ NZ_CP009273 1310877 1310929 53 2 [1] [1] 2 trpA tryptophan synthase subunit alpha
* * ÷ NZ_CP009273 1311586 1311630 45 2 [0] [1] 2 trpB tryptophan synthase subunit beta
* * ÷ NZ_CP009273 1314388 1314537 150 2 [1] [1] 2 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1317138 1317173 36 2 [1] [1] 2 trpE anthranilate synthase component I
* * ÷ NZ_CP009273 1317572 1317577 6 2 [1] [0] 3 yciV RNase AM
* * ÷ NZ_CP009273 1320833 1320915 83 3 [1] [1] 3 [yciQ] [yciQ]
* * ÷ NZ_CP009273 1323363 1323399 37 2 [1] [1] 3 [yciK] [yciK]
* * ÷ NZ_CP009273 1324134 1324180 47 2 [1] [1] 2 sohB protease SohB
* * ÷ NZ_CP009273 1328955 1329078 124 4 [0] [1] 2 cysB HTH‑type transcriptional regulator CysB
* * ÷ NZ_CP009273 1329360 1329392 33 2 [1] [1] 4 cysB/ymiA HTH‑type transcriptional regulator CysB/YmiA family putative membrane protein
* * ÷ NZ_CP009273 1329671 1329682 12 4 [1] [1] 2 BW25113_RS06660 hypothetical protein
* * ÷ NZ_CP009273 1330896 1330905 10 2 [0] [0] 2 acnA aconitate hydratase AcnA
* * ÷ NZ_CP009273 1333755 1333780 26 2 [1] [1] 3 pgpB phosphatidylglycerophosphatase B
* * ÷ NZ_CP009273 1334848 1334875 28 2 [1] [1] 2 lapB lipopolysaccharide assembly protein LapB
* * ÷ NZ_CP009273 1342716 1342742 27 2 [1] [1] 2 rnb exoribonuclease II
* * ÷ NZ_CP009273 1343504 1343534 31 2 [1] [1] 3 yciW CMD domain‑containing protein
* * ÷ NZ_CP009273 1345725 1345770 46 2 [1] [0] 3 ycjD DUF559 domain‑containing protein
* * ÷ NZ_CP009273 1345993 1346096 104 2 [1] [1] 2 [ycjD]–[sapF] [ycjD],[sapF]
* * ÷ NZ_CP009273 1357228 1357246 19 2 [0] [1] 2 puuC aldehyde dehydrogenase PuuC
* * ÷ NZ_CP009273 1360525 1360598 74 2 [1] [1] 2 puuE 4‑aminobutyrate transaminase
* * ÷ NZ_CP009273 1363730 1363756 27 2 [1] [1] 2 pspD phage shock protein PspD
* * ÷ NZ_CP009273 1372953 1373050 98 2 [1] [1] 2 ycjT kojibiose phosphorylase
* * ÷ NZ_CP009273 1374909 1374949 41 2 [0] [1] 3 pgmB beta‑phosphoglucomutase
* * ÷ NZ_CP009273 1385847 1385894 48 2 [1] [1] 2 ycjY alpha/beta hydrolase
* * ÷ NZ_CP009273 1387768 1387776 9 2 [1] [0] 3 mppA murein tripeptide ABC transporter substrate‑binding protein MppA
* * ÷ NZ_CP009273 1391571 1391620 50 2 [1] [1] 3 BW25113_RS06980/ynaJ IS5‑like element IS5 family transposase/DUF2534 family protein
* * ÷ NZ_CP009273 1399694 1399770 77 2 [1] [1] 3 abgR LysR family transcriptional regulator
* * ÷ NZ_CP009273 1416421 1416480 60 2 [1] [0] 2 ydaV ATP‑binding protein
* * ÷ NZ_CP009273 1417918 1417996 79 2 [0] [1] 2 BW25113_RS26130/trkG hypothetical protein/Trk system potassium transporter TrkG
* * ÷ NZ_CP009273 1429097 1429160 64 2 [1] [1] 2 BW25113_RS25575/uspF hypothetical protein/universal stress protein UspF
* * ÷ NZ_CP009273 1430115 1430125 11 3 [1] [0] 2 ompN porin OmpN
* * ÷ NZ_CP009273 1430181 1430207 27 2 [0] [1] 2 ompN porin OmpN
* * ÷ NZ_CP009273 1433710 1433771 62 2 [0] [1] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1444128 1444139 12 2 [1] [1] 2 tynA primary‑amine oxidase
* * ÷ NZ_CP009273 1458451 1458473 23 3 [1] [1] 3 paaX phenylacetic acid degradation operon negative regulatory protein PaaX
* * ÷ NZ_CP009273 1459525 1459566 42 2 [1] [1] 2 BW25113_RS25580/BW25113_RS07350 hypothetical protein/autotransporter domain‑containing protein
* * ÷ NZ_CP009273 1489371 1489426 56 2 [1] [1] 3 ydcI/ydcJ LysR substrate‑binding domain‑containing protein/VOC family protein
* * ÷ NZ_CP009273 1503104 1503129 26 3 [1] [1] 3 yncJ YncJ family protein
* * ÷ NZ_CP009273 1503781 1503814 34 2 [0] [1] 2 hicB type II toxin‑antitoxin system antitoxin HicB
* * ÷ NZ_CP009273 1524230 1524293 64 3 [1] [1] 2 BW25113_RS07645/BW25113_RS26145 RHS repeat protein/hypothetical protein
* * ÷ NZ_CP009273 1524384 1524470 87 2 [1] [1] 3 [BW25113_RS26145] [BW25113_RS26145]
* * ÷ NZ_CP009273 1524510 1524792 283 3 [1] [0] 2 [BW25113_RS26145]–BW25113_RS25600 [BW25113_RS26145],BW25113_RS25600
* * ÷ NZ_CP009273 1524847 1524906 60 2 [0] [1] 2 BW25113_RS07655 ISAs1 family transposase
* * ÷ NZ_CP009273 1527525 1527600 76 2 [1] [1] 2 [pptA]–[yddH] [pptA],[yddH]
* * ÷ NZ_CP009273 1559291 1559300 10 3 [1] [0] 3 dosP oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1566414 1566426 13 2 [0] [1] 2 gadB/pqqL glutamate decarboxylase/insulinase family protein
* * ÷ NZ_CP009273 1566560 1566619 60 2 [1] [1] 2 gadB/pqqL glutamate decarboxylase/insulinase family protein
* * ÷ NZ_CP009273 1577745 1577784 40 2 [1] [0] 2 ydeO acid stress response transcriptional regulator YdeO
* * ÷ NZ_CP009273 1605028 1605055 28 3 [1] [1] 3 uxaB/dgcF tagaturonate reductase/GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1610343 1610387 45 2 [1] [0] 2 yneK putative protein YneK
* * ÷ NZ_CP009273 1618264 1618273 10 2 [1] [0] 2 dgcZ/ydeI diguanylate cyclase DgcZ/YdeI family stress tolerance OB fold protein
* * ÷ NZ_CP009273 1623199 1623212 14 2 [1] [1] 2 ydfH DNA‑binding transcriptional regulator rspR
* * ÷ NZ_CP009273 1625100 1625131 32 2 [0] [1] 2 ydfI mannitol dehydrogenase family protein
* * ÷ NZ_CP009273 1631309 1631474 166 2 [1] [1] 3 ydfO DUF1398 domain‑containing protein
* * ÷ NZ_CP009273 1635032 1635037 6 2 [0] [1] 3 essD/ynfU phage lysis protein EssD/putative zinc‑binding protein YnfU
* * ÷ NZ_CP009273 1659803 1659806 4 3 [1] [0] 2 clcB voltage‑gated ClC‑type chloride channel ClcB
* * ÷ NZ_CP009273 1671479 1671549 71 2 [1] [1] 2 pntA Re/Si‑specific NAD(P)(+) transhydrogenase subunit alpha
* * ÷ NZ_CP009273 1676762 1676796 35 2 [1] [1] 4 rstA two‑component system response regulator RstA
* * ÷ NZ_CP009273 1723651 1723658 8 2 [1] [0] 2 lhr ATP‑dependent helicase
* * ÷ NZ_CP009273 1729838 1729877 40 4 [1] [1] 2 sodB superoxide dismutase [Fe]
* * ÷ NZ_CP009273 1733868 1733906 39 2 [1] [1] 2 punR DNA‑binding transcriptional activator PunR
* * ÷ NZ_CP009273 1758816 1758833 18 2 [0] [1] 2 sufA/ydiH Fe‑S cluster assembly scaffold SufA/YdiH family protein
* * ÷ NZ_CP009273 1794727 1794765 39 3 [1] [1] 2 infC translation initiation factor IF‑3
* * ÷ NZ_CP009273 1806941 1806969 29 2 [1] [1] 2 BW25113_RS09050 hypothetical protein
* * ÷ NZ_CP009273 1822966 1823006 41 2 [1] [1] 2 astD succinylglutamate‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1830516 1830609 94 2 [1] [1] 2 ynjB ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 1837154 1837179 26 2 [1] [0] 2 gdhA NADP‑specific glutamate dehydrogenase
* * ÷ NZ_CP009273 1864537 1864572 36 2 [1] [1] 2 yeaH/cdgI YeaH/YhbH family protein/GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1918631 1918660 30 2 [1] [1] 2 copD copper homeostasis membrane protein CopD
* * ÷ NZ_CP009273 1944249 1944269 21 2 [1] [1] 2 aspS aspartate‑‑tRNA ligase
* * ÷ NZ_CP009273 1947134 1947156 23 3 [1] [1] 2 cmoA carboxy‑S‑adenosyl‑L‑methionine synthase CmoA
* * ÷ NZ_CP009273 1947235 1947286 52 2 [1] [1] 2 cmoA carboxy‑S‑adenosyl‑L‑methionine synthase CmoA
* * ÷ NZ_CP009273 1952432 1952540 109 2 [1] [1] 2 torY/cutC NapC/NirT family cytochrome c/copper homeostasis protein CutC
* * ÷ NZ_CP009273 1959443 1959474 32 2 [0] [1] 2 flhB flagellar biosynthesis protein FlhB
* * ÷ NZ_CP009273 1972752 1972760 9 20 [0] [0] 2 flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* * ÷ NZ_CP009273 1973115 1973143 29 2 [1] [0] 3 flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
* * ÷ NZ_CP009273 1978839 1978920 82 2 [1] [0] 2 araF arabinose ABC transporter substrate‑binding protein AraF
* * ÷ NZ_CP009273 1979063 1979078 16 2 [1] [0] 2 araF arabinose ABC transporter substrate‑binding protein AraF
* * ÷ NZ_CP009273 1991553 1991586 34 2 [1] [1] 2 tcyL cystine ABC transporter permease
* * ÷ NZ_CP009273 2004840 2004904 65 2 [0] [1] 3 BW25113_RS10120 DUF5503 domain‑containing protein
* * ÷ NZ_CP009273 2016224 2016234 11 2 [0] [0] 2 fliQ flagellar biosynthesis protein FliQ
* * ÷ NZ_CP009273 2017096 2017170 75 2 [0] [1] 2 [fliR] [fliR]
* * ÷ NZ_CP009273 2035713 2035806 94 2 [1] [1] 2 zinT/yodB metal‑binding protein ZinT/cytochrome b
* * ÷ NZ_CP009273 2062117 2062132 16 3 [1] [0] 2 BW25113_RS24005 TonB‑dependent receptor plug domain‑containing protein
* * ÷ NZ_CP009273 2073206 2073216 11 3 [0] [1] 3 yeeA FUSC family protein
* * ÷ NZ_CP009273 2092788 2092809 22 3 [1] [0] 2 ugd UDP‑glucose 6‑dehydrogenase
* * ÷ NZ_CP009273 2096851 2096861 11 2 [0] [0] 2 wbbL N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL
* * ÷ NZ_CP009273 2096908 2096972 65 2 [0] [1] 2 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2097272 2097389 118 2 [1] [1] 2 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2101121 2101131 11 2 [1] [1] 2 glf UDP‑galactopyranose mutase
* * ÷ NZ_CP009273 2101560 2101661 102 3 [1] [1] 2 glf UDP‑galactopyranose mutase
* * ÷ NZ_CP009273 2102575 2102597 23 2 [1] [1] 3 wzx O16 family O‑antigen flippase
* * ÷ NZ_CP009273 2103626 2103723 98 2 [1] [1] 2 rfbA glucose‑1‑phosphate thymidylyltransferase RfbA
* * ÷ NZ_CP009273 2132071 2132124 54 2 [1] [1] 2 yegH TerC family protein
* * ÷ NZ_CP009273 2132651 2132663 13 2 [1] [0] 2 yegH TerC family protein
* * ÷ NZ_CP009273 2144482 2144603 122 2 [1] [1] 2 yegI/yegJ protein kinase YegI/DUF2314 domain‑containing protein
* * ÷ NZ_CP009273 2170517 2170553 37 2 [1] [1] 2 gatY tagatose‑bisphosphate aldolase subunit GatY
* * ÷ NZ_CP009273 2173938 2173944 7 3 [0] [1] 2 yegU ADP‑ribosylglycohydrolase family protein
* * ÷ NZ_CP009273 2185801 2185846 46 2 [0] [1] 3 yehD/yehE fimbrial protein/YehE family protein
* * ÷ NZ_CP009273 2185908 2185918 11 2 [0] [1] 2 yehD/yehE fimbrial protein/YehE family protein
* * ÷ NZ_CP009273 2189862 2189899 38 2 [1] [1] 2 metG/BW25113_RS25680 methionine‑‑tRNA ligase/WGR and DUF4132 domain‑containing protein
* * ÷ NZ_CP009273 2202407 2202422 16 2 [1] [1] 2 yehP VWA domain‑containing protein
* * ÷ NZ_CP009273 2210455 2210463 9 2 [1] [0] 3 yehX glycine betaine ABC transporter ATP binding protein YehX
* * ÷ NZ_CP009273 2210687 2210756 70 3 [1] [1] 2 yehX glycine betaine ABC transporter ATP binding protein YehX
* * ÷ NZ_CP009273 2211007 2211078 72 2 [1] [1] 2 yehY glycine betaine ABC transporter permease YehY
* * ÷ NZ_CP009273 2213028 2213074 47 2 [1] [1] 2 osmF/bglX glycine betaine ABC transporter substrate‑binding protein OsmF/beta‑glucosidase BglX
* * ÷ NZ_CP009273 2215786 2215865 80 3 [1] [1] 2 dld D‑lactate dehydrogenase
* * ÷ NZ_CP009273 2221808 2221892 85 2 [1] [1] 2 mdtQ multidrug resistance outer membrane protein MdtQ
* * ÷ NZ_CP009273 2222285 2222320 36 2 [1] [0] 2 mdtQ/yohP multidrug resistance outer membrane protein MdtQ/protein YohP
* * ÷ NZ_CP009273 2233806 2233815 10 4 [0] [0] 2 mglB galactose/glucose ABC transporter substrate‑binding protein MglB
* * ÷ NZ_CP009273 2250158 2250164 7 2 [1] [1] 2 psuT NupC/NupG family nucleoside CNT transporter
* * ÷ NZ_CP009273 2258187 2258231 45 2 [1] [1] 2 setB sugar efflux transporter SetB
* * ÷ NZ_CP009273 2291529 2291540 12 2 [1] [0] 5 napC cytochrome c‑type protein NapC
* * ÷ NZ_CP009273 2300543 2300599 57 2 [1] [1] 2 yojI microcin J25 efflux ABC transporter YojI
* * ÷ NZ_CP009273 2306388 2306489 102 2 [1] [1] 2 ompC/rcsD porin OmpC/phosphotransferase RcsD
* * ÷ NZ_CP009273 2337695 2337869 175 2 [1] [1] 2 yfaL/nrdA AIDA‑I family autotransporter adhesin YfaL/EhaC/ribonucleoside‑diphosphate reductase subunit alpha
* * ÷ NZ_CP009273 2348116 2348163 48 2 [0] [1] 2 glpB glycerol‑3‑phosphate dehydrogenase subunit GlpB
* * ÷ NZ_CP009273 2370654 2370785 132 2 [1] [1] 3 menH 2‑succinyl‑6‑hydroxy‑2, 4‑cyclohexadiene‑1‑carboxylate synthase
* * ÷ NZ_CP009273 2395795 2395813 19 3 [1] [1] 3 nuoC NADH‑quinone oxidoreductase subunit C/D
* * ÷ NZ_CP009273 2400571 2400662 92 3 [1] [1] 2 lrhA/alaA transcriptional regulator LrhA/alanine transaminase AlaA
* * ÷ NZ_CP009273 2415735 2415796 62 2 [1] [1] 3 yfcH TIGR01777 family oxidoreductase
* * ÷ NZ_CP009273 2430944 2430976 33 2 [1] [1] 2 pdxB 4‑phosphoerythronate dehydrogenase PdxB
* * ÷ NZ_CP009273 2463656 2463724 69 2 [1] [1] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2463864 2463873 10 2 [1] [0] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2467162 2467184 23 2 [1] [1] 2 BW25113_RS12305 hypothetical protein
* * ÷ NZ_CP009273 2470968 2470985 18 2 [1] [0] 2 dsdC DNA‑binding transcriptional regulator DsdC
* * ÷ NZ_CP009273 2474616 2474656 41 2 [1] [0] 2 emrY multidrug efflux MFS transporter permease subunit EmrY
* * ÷ NZ_CP009273 2490293 2490305 13 4 [1] [0] 4 lpxP/ypdK kdo(2)‑lipid IV(A) palmitoleoyltransferase/membrane protein YpdK
* * ÷ NZ_CP009273 2539288 2539298 11 2 [0] [1] 2 murQ N‑acetylmuramic acid 6‑phosphate etherase
* * ÷ NZ_CP009273 2568203 2568233 31 2 [1] [0] 2 eutQ ethanolamine utilization acetate kinase EutQ
* * ÷ NZ_CP009273 2579480 2579500 21 3 [1] [1] 2 narQ nitrate/nitrite two‑component system sensor histidine kinase NarQ
* * ÷ NZ_CP009273 2616080 2616107 28 3 [1] [1] 2 purN phosphoribosylglycinamide formyltransferase
* * ÷ NZ_CP009273 2629200 2629216 17 2 [1] [1] 2 yfgJ/der zinc‑ribbon domain‑containing protein/ribosome biogenesis GTPase Der
* * ÷ NZ_CP009273 2696965 2696992 28 3 [1] [1] 2 rnc ribonuclease III
* * ÷ NZ_CP009273 2700231 2700231 1 2 [0] [0] 2 lepA translation elongation factor 4
* * ÷ NZ_CP009273 2777035 2777050 16 2 [1] [0] 2 BW25113_RS25705 DUF5507 domain‑containing protein
* * ÷ NZ_CP009273 2777839 2777918 80 2 [1] [1] 2 BW25113_RS25705 DUF5507 domain‑containing protein
* * ÷ NZ_CP009273 2791947 2792062 116 2 [1] [1] 2 stpA/alaE DNA‑binding protein StpA/L‑alanine exporter AlaE
* * ÷ NZ_CP009273 2795197 2795205 9 2 [1] [0] 2 nrdE class 1b ribonucleoside‑diphosphate reductase subunit alpha
* * ÷ NZ_CP009273 2827945 2827955 11 2 [0] [1] 3 norW NADH:flavorubredoxin reductase NorW
* * ÷ NZ_CP009273 2975780 2975789 10 2 [1] [1] 2 araE/kduD arabinose‑proton symporter AraE/2‑dehydro‑3‑deoxy‑D‑gluconate 5‑dehydrogenase KduD
* * ÷ NZ_CP009273 2984510 2984625 116 2 [1] [1] 2 BW25113_RS14825/ygeG hypothetical protein/tetratricopeptide repeat protein
* * ÷ NZ_CP009273 2985203 2985306 104 2 [0] [1] 3 ygeG/ygeH tetratricopeptide repeat protein/HilA family transcriptional regulator YgeH
* * ÷ NZ_CP009273 2988592 2988671 80 2 [1] [1] 2 BW25113_RS14850/BW25113_RS26010 response regulator transcription factor/hypothetical protein
* * ÷ NZ_CP009273 3044198 3044304 107 2 [1] [1] 2 gcvT/BW25113_RS25745 glycine cleavage system aminomethyltransferase GcvT/protein YqfI
* * ÷ NZ_CP009273 3157632 3157685 54 2 [1] [1] 2 parC DNA topoisomerase IV subunit A
* * ÷ NZ_CP009273 3183983 3183997 15 2 [0] [1] 2 [yqiH]–[yqiI] [yqiH],[yqiI]
* * ÷ NZ_CP009273 3246069 3246132 64 4 [1] [0] 2 yhaH/yhaI DUF805 domain‑containing protein/DUF805 domain‑containing protein
* * ÷ NZ_CP009273 3246178 3246189 12 2 [0] [1] 2 yhaH/yhaI DUF805 domain‑containing protein/DUF805 domain‑containing protein
* * ÷ NZ_CP009273 3262331 3262410 80 2 [1] [1] 2 yhaC YhaC family protein
* * ÷ NZ_CP009273 3354247 3354314 68 2 [1] [1] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein
* * ÷ NZ_CP009273 3361998 3362030 33 2 [1] [1] 2 yhcG PDDEXK nuclease domain‑containing protein
* * ÷ NZ_CP009273 3378715 3378828 114 2 [1] [1] 3 argR/yhcN transcriptional regulator ArgR/peroxide/acid stress response protein YhcN
* * ÷ NZ_CP009273 3492655 3492667 13 3 [1] [0] 4 cysG/yhfL siroheme synthase CysG/YhfL family protein
* * ÷ NZ_CP009273 3647059 3647071 13 3 [1] [1] 2 BW25113_RS18165/slp hypothetical protein/outer membrane lipoprotein Slp
* * ÷ NZ_CP009273 3797745 3797774 30 2 [1] [0] 2 rfaS LPS core biosynthesis protein RfaS
* * ÷ NZ_CP009273 3996412 3996448 37 3 [0] [1] 2 BW25113_RS19825 hypothetical protein
* * ÷ NZ_CP009273 4194427 4194441 15 3 [1] [1] 2 zraR sigma‑54‑dependent response regulator transcription factor ZraR
* * ÷ NZ_CP009273 4466780 4466882 103 3 [1] [1] 3 BW25113_RS22080 hypothetical protein
* * ÷ NZ_CP009273 4531522 4531557 36 2 [0] [1] 2 fimB/fimE type 1 fimbria switch DNA invertase FimB/type 1 fimbria switch DNA invertase FimE

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 360104 =NA (NA)24 (1.950) 16/168 0.1 NA intergenic (‑35/+251) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
?NZ_CP009273 = 360286 NA (NA)intergenic (‑217/+69) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
* ? NZ_CP009273 = 19727510 (0.000)20 (1.620) 16/168 0.1 100% intergenic (‑297/‑483) flhD/uspC flagellar transcriptional regulator FlhD/universal stress protein UspC
?NZ_CP009273 = 2283592 NA (NA)intergenic (‑68/‑387) BW25113_RS11435/narP IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP
* ? NZ_CP009273 4532499 =2 (0.160)5 (0.450) 5/150 0.6 56.2% intergenic (+49/‑433) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
?NZ_CP009273 4532813 = 6 (0.550)intergenic (+363/‑119) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
* ? NZ_CP009273 = 45325072 (0.160)6 (0.550) 5/150 0.6 60.7% intergenic (+57/‑425) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
?NZ_CP009273 = 4532803 6 (0.550)intergenic (+353/‑129) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA