breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	annotation	gene	description
RA	474,101	+CA	coding (1205/1677 nt)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	501,165	(A)7→6	intergenic (+98/+646)	ybbD → / ← ylbG	hypothetical protein/predicted DNA‑binding transcriptional regulator
MC JC	1,306,124	Δ10 bp	coding (107‑116/1461 nt)	cls ←	cardiolipin synthetase
RA	1,329,516	C→T	H33Y (CAC→TAC)	topA →	DNA topoisomerase I
JC	1,733,297	(CGTATGAA)1→2	coding (333/1413 nt)	pykF →	pyruvate kinase
RA	1,954,706	T→G	K107T (AAA→ACA)	motB ←	flagellar motor protein MotB
RA	2,131,466	(A)9→8	intergenic (‑125/+175)	gatY ← / ← fbaB	D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase
RA	2,193,779	G→T	L143I (CTT→ATT)	yeiB ←	conserved inner membrane protein
RA	3,490,530	(T)6→7	intergenic (‑106/‑84)	glpE ← / → glpD	thiosulfate sulfurtransferase/sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
RA	3,762,741	A→T	K662I (AAA→ATA)	spoT →	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	3,875,632	(T)7→8	intergenic (‑66/+287)	glmU ← / ← atpC	bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon
MC JC	3,894,997	Δ6,934 bp	IS150‑mediated	rbsD–[yieO]	rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]
JC	3,928,336	+AAG	coding (120/1260 nt)	rho →	transcription termination factor Rho
RA	4,161,306	C→T	R151C (CGT→TGT)	rpoB →	DNA‑directed RNA polymerase subunit beta
RA	4,201,841	Δ1 bp	coding (719/825 nt)	iclR ←	DNA‑binding transcriptional repressor
RA	4,404,055	T→A	I21N (ATC→AAC)	rpsR →	30S ribosomal protein S18
JC JC	4,524,522	IS186 (+) +6 bp	coding (494‑499/549 nt)	fimA →	major type 1 subunit fimbrin (pilin)