mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 474,270 | C→T | E346K (GAG→AAG) | ybaL ← | predicted transporter with NAD(P)‑binding Rossmann‑fold domain |
| RA | 1,329,516 | C→T | H33Y (CAC→TAC) | topA → | DNA topoisomerase I |
| JC | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
| RA | 1,886,204 | G→A | intergenic (‑34/+635) | yobF ← / ← yebO | hypothetical protein/hypothetical protein |
| RA | 2,193,779 | G→T | L143I (CTT→ATT) | yeiB ← | conserved inner membrane protein |
| RA | 2,519,775 | T→C | T272A (ACA→GCA) | dapA ← | dihydrodipicolinate synthase |
| RA | 3,014,857 | T→G | L93R (CTG→CGG) | ECB_02816 → | KpsD protein |
| MC JC | 3,147,765 | Δ27 bp | [ygjF] | [ygjF] | |
| RA | 3,762,741 | A→T | K662I (AAA→ATA) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 3,873,040 | C→A | R332L (CGC→CTC) | glmS ← | D‑fructose‑6‑phosphate amidotransferase |
| RA | 3,875,632 | (T)7→8 | intergenic (‑66/+287) | glmU ← / ← atpC | bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon |
| MC JC | 3,894,997 | Δ6,934 bp | IS150‑mediated | rbsD–[yieO] | rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO] |
| RA | 3,999,913 | A→G | Q406R (CAG→CGG) | ubiB → | putative ubiquinone biosynthesis protein UbiB |
| MC JC | 4,168,970 | Δ3 bp | coding (4010‑4012/4224 nt) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 4,455,629 | T→C | D15G (GAC→GGC) | pyrB ← | aspartate carbamoyltransferase catalytic subunit |
| JC JC | 4,524,522 | IS186 (+) +6 bp | coding (494‑499/549 nt) | fimA → | major type 1 subunit fimbrin (pilin) |