mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.32.0b
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 270331 = | NA (NA) | 5 (0.110) | 5/272 | 5.8 | NA | noncoding (126/335 nt) | IS911 | repeat region |
| ? | CP009273 | 270374 = | NA (NA) | noncoding (169/335 nt) | IS911 | repeat region | |||||
| * | ? | CP009273 | = 284124 | 70 (1.510) | 3 (0.070) | 3/272 | 6.9 | 4.5% | coding (750/759 nt) | yagI | CP4‑6 prophage; putative DNA‑binding transcriptional regulator |
| ? | CP009273 | = 284150 | 62 (1.430) | coding (724/759 nt) | yagI | CP4‑6 prophage; putative DNA‑binding transcriptional regulator | |||||
| * | ? | CP009273 | 3084336 = | 44 (0.950) | 4 (0.090) | 3/276 | 7.0 | 8.7% | coding (631/708 nt) | endA | DNA‑specific endonuclease I |
| ? | CP009273 | 3084354 = | 42 (0.950) | coding (649/708 nt) | endA | DNA‑specific endonuclease I | |||||
| * | ? | CP009273 | 2825238 = | 48 (1.030) | 3 (0.070) | 3/274 | 7.0 | 6.6% | coding (411/1515 nt) | norR | anaerobic nitric oxide reductase DNA‑binding transcriptional activator |
| ? | CP009273 | 2825280 = | 40 (0.910) | coding (369/1515 nt) | norR | anaerobic nitric oxide reductase DNA‑binding transcriptional activator | |||||
| * | ? | CP009273 | 3948968 = | 57 (1.230) | 3 (0.070) | 3/278 | 7.1 | 5.1% | coding (278/1545 nt) | ilvA | L‑threonine dehydratase, biosynthetic; also known as threonine deaminase |
| ? | CP009273 | 3949050 = | 56 (1.260) | coding (360/1545 nt) | ilvA | L‑threonine dehydratase, biosynthetic; also known as threonine deaminase | |||||
| * | ? | CP009273 | 1086531 = | 32 (0.690) | 3 (0.070) | 3/278 | 7.1 | 8.5% | coding (1215/2424 nt) | pgaA | biofilm adhesin polysaccharide PGA secretin; OM porin; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein |
| ? | CP009273 | 1086560 = | 34 (0.760) | coding (1186/2424 nt) | pgaA | biofilm adhesin polysaccharide PGA secretin; OM porin; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein | |||||