mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 31 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4295831 = | NA (NA) | 4 (0.090) | 3/206 | 7.2 | NA | intergenic (+38/+606) | gltP/yjcO | glutamate/aspartate:proton symporter/Sel1 family TPR‑like repeat protein |
| ? | NC_000913 | = 4296395 | NA (NA) | noncoding (562/602 nt) | RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites | RIP321 (repetitive extragenic palindromic) element, contains 11 REP sequences and 4 IHF sites | |||||
| * | ? | NC_000913 | 3423374 = | 57 (0.980) | 9 (0.160) | 6/280 | 7.3 | 13.1% | intergenic (+182/+47) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | = 4213161 | 63 (1.090) | intergenic (+3/‑72) | rrfE/yjaA | 5S ribosomal RNA of rrnE operon/stress‑induced protein | |||||
| * | ? | NC_000913 | 3423374 = | 57 (0.980) | 9 (0.160) | 6/280 | 7.3 | 20.6% | intergenic (+182/+47) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | = 3946821 | 13 (0.230) | intergenic (+3/‑50) | rrfC/aspT | 5S ribosomal RNA of rrnC operon/tRNA‑Asp | |||||
| * | ? | NC_000913 | 3423374 = | 57 (0.980) | 9 (0.160) | 6/280 | 7.3 | 14.0% | intergenic (+182/+47) | yhdZ/rrfF | putative amino acid ABC transporter ATPase/5S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 3423663 = | 54 (0.940) | intergenic (‑10/+3) | thrV/rrfD | tRNA‑Thr/5S ribosomal RNA of rrnD operon | |||||
| * | ? | NC_000913 | = 2443832 | NA (NA) | 5 (0.090) | 5/282 | 7.9 | NA | noncoding (46/80 nt) | REP171 (repetitive extragenic palindromic) element, contains 2 REP sequences | REP171 (repetitive extragenic palindromic) element, contains 2 REP sequences |
| ? | NC_000913 | = 2443867 | NA (NA) | intergenic (+99/+22) | mnmC/yfcL | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme/uncharacterized protein | |||||
| * | ? | NC_000913 | 1360805 = | 71 (1.210) | 4 (0.070) | 4/266 | 8.1 | 6.1% | coding (104/1419 nt) | puuA | glutamate‑‑putrescine ligase |
| ? | NC_000913 | 1360853 = | 56 (1.020) | coding (56/1419 nt) | puuA | glutamate‑‑putrescine ligase | |||||
| * | ? | NC_000913 | 2566837 = | 49 (0.840) | 4 (0.070) | 4/270 | 8.2 | 8.5% | coding (46/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | NC_000913 | 2566935 = | 40 (0.720) | coding (1171/1227 nt) | eutH | ethanolamine transporter | |||||
| * | ? | NC_000913 | = 2380662 | 66 (1.130) | 4 (0.070) | 4/270 | 8.2 | 5.9% | intergenic (‑21/+58) | menF/elaB | isochorismate synthase 2/putative membrane‑anchored DUF883 family ribosome‑binding protein |
| ? | NC_000913 | = 2380717 | 64 (1.150) | intergenic (‑76/+3) | menF/elaB | isochorismate synthase 2/putative membrane‑anchored DUF883 family ribosome‑binding protein | |||||
| * | ? | NC_000913 | = 368554 | 61 (1.040) | 4 (0.070) | 4/270 | 8.2 | 6.4% | intergenic (‑134/‑57) | mhpR/mhpA | mhp operon transcriptional activator/3‑(3‑hydroxyphenyl)propionate hydroxylase |
| ? | NC_000913 | = 368583 | 59 (1.060) | intergenic (‑163/‑28) | mhpR/mhpA | mhp operon transcriptional activator/3‑(3‑hydroxyphenyl)propionate hydroxylase | |||||
| * | ? | NC_000913 | = 3987307 | 55 (0.940) | 4 (0.070) | 4/274 | 8.3 | 6.8% | coding (575/1197 nt) | hemY | putative protoheme IX synthesis protein |
| ? | NC_000913 | = 3987324 | 57 (1.010) | coding (558/1197 nt) | hemY | putative protoheme IX synthesis protein | |||||