mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 36 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4474083 = | 112 (1.090) | 4 (0.040) | 4/240 | NT | 3.9% | intergenic (‑30/‑41) | bdcA/bdcR | c‑di‑GMP‑binding biofilm dispersal mediator protein/transcriptional repressor for divergent bdcA |
| ? | NC_000913 | 4474127 = | 95 (1.010) | coding (4/594 nt) | bdcR | transcriptional repressor for divergent bdcA | |||||
| * | ? | NC_000913 | 4429108 = | 99 (0.960) | 3 (0.030) | 4/250 | NT | 3.0% | coding (174/621 nt) | fklB | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) |
| ? | NC_000913 | 4429147 = | 99 (1.010) | coding (213/621 nt) | fklB | FKBP‑type peptidyl‑prolyl cis‑trans isomerase (rotamase) | |||||
| * | ? | NC_000913 | 4317083 = | 85 (0.820) | 4 (0.040) | 4/246 | NT | 4.5% | coding (136/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | NC_000913 | 4317120 = | 91 (0.940) | coding (99/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
| * | ? | NC_000913 | 4271109 = | 92 (0.890) | 3 (0.030) | 3/252 | NT | 3.5% | coding (2763/2823 nt) | uvrA | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC |
| ? | NC_000913 | 4271140 = | 78 (0.790) | coding (2732/2823 nt) | uvrA | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | |||||
| * | ? | NC_000913 | 4218366 = | 97 (0.940) | 4 (0.040) | 4/246 | NT | 4.2% | coding (1258/1305 nt) | aceA | isocitrate lyase |
| ? | NC_000913 | 4218401 = | NA (NA) | coding (1293/1305 nt) | aceA | isocitrate lyase | |||||
| * | ? | NC_000913 | = 3999750 | 94 (0.910) | 4 (0.040) | 3/254 | NT | 4.0% | coding (1768/2163 nt) | uvrD | DNA‑dependent ATPase I and helicase II |
| ? | NC_000913 | = 3999767 | 101 (1.010) | coding (1785/2163 nt) | uvrD | DNA‑dependent ATPase I and helicase II | |||||
| * | ? | NC_000913 | 3982351 = | 95 (0.920) | 3 (0.030) | 3/250 | NT | 3.2% | intergenic (+79/‑24) | yifK/argX | putative APC family amino acid transporter/tRNA‑Arg |
| ? | NC_000913 | 3982397 = | 88 (0.890) | noncoding (23/77 nt) | argX | tRNA‑Arg | |||||
| * | ? | NC_000913 | = 3855212 | 82 (0.800) | 3 (0.030) | 3/250 | NT | 3.7% | coding (400/498 nt) | yidF | putative Cys‑type oxidative YidJ‑maturating enzyme |
| ? | NC_000913 | = 3855263 | 78 (0.790) | coding (349/498 nt) | yidF | putative Cys‑type oxidative YidJ‑maturating enzyme | |||||
| * | ? | NC_000913 | 3766956 = | 97 (0.940) | 4 (0.040) | 4/248 | NT | 4.5% | coding (620/843 nt) | yibA | putative immunity protein for polymorphic toxin RhsA; HEAT‑domain protein; lethality reduction protein |
| ? | NC_000913 | 3766985 = | 77 (0.790) | coding (649/843 nt) | yibA | putative immunity protein for polymorphic toxin RhsA; HEAT‑domain protein; lethality reduction protein | |||||
| * | ? | NC_000913 | 3670807 = | 69 (0.670) | 3 (0.030) | 3/252 | NT | 3.8% | coding (1216/1650 nt) | treF | cytoplasmic trehalase |
| ? | NC_000913 | 3670847 = | 86 (0.870) | coding (1256/1650 nt) | treF | cytoplasmic trehalase | |||||