mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 333 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4602165 | 122 (0.860) | 11 (0.080) | 6/164 | NT | 8.6% | coding (694/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | = 4602178 | 122 (0.940) | coding (681/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | = 4588805 | 130 (0.920) | 6 (0.050) | 5/164 | NT | 4.5% | coding (61/957 nt) | yjiA | metal‑binding GTPase |
| ? | NC_000913 | = 4588819 | 137 (1.050) | coding (47/957 nt) | yjiA | metal‑binding GTPase | |||||
| * | ? | NC_000913 | 4588347 = | 173 (1.220) | 5 (0.040) | 5/166 | NT | 3.2% | coding (519/957 nt) | yjiA | metal‑binding GTPase |
| ? | NC_000913 | 4588379 = | 143 (1.090) | coding (487/957 nt) | yjiA | metal‑binding GTPase | |||||
| * | ? | NC_000913 | = 4571450 | 139 (0.980) | 13 (0.100) | 10/166 | NT | 8.5% | coding (125/1413 nt) | yjiR | putative DNA‑binding transcriptional regulator/putative aminotransferase |
| ? | NC_000913 | = 4571464 | 149 (1.130) | coding (111/1413 nt) | yjiR | putative DNA‑binding transcriptional regulator/putative aminotransferase | |||||
| * | ? | NC_000913 | = 4570520 | 139 (0.980) | 13 (0.100) | 8/168 | NT | 9.1% | coding (1055/1413 nt) | yjiR | putative DNA‑binding transcriptional regulator/putative aminotransferase |
| ? | NC_000913 | = 4570536 | 129 (0.970) | coding (1039/1413 nt) | yjiR | putative DNA‑binding transcriptional regulator/putative aminotransferase | |||||
| * | ? | NC_000913 | 4531468 = | 156 (1.100) | 9 (0.070) | 5/168 | NT | 6.0% | coding (184/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain |
| ? | NC_000913 | 4531508 = | 135 (1.010) | coding (144/1122 nt) | sgcX | putative endoglucanase with Zn‑dependent exopeptidase domain | |||||
| * | ? | NC_000913 | = 4467562 | 144 (1.020) | 12 (0.090) | 7/164 | NT | 8.4% | intergenic (+78/‑63) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter |
| ? | NC_000913 | = 4467577 | 129 (0.990) | intergenic (+93/‑48) | mgtL/mgtA | regulatory leader peptide for mgtA/magnesium transporter | |||||
| * | ? | NC_000913 | 4465504 = | 150 (1.060) | 18 (0.140) | 8/162 | NT | 12.8% | coding (677/1422 nt) | treB | trehalose‑specific PTS enzyme: IIB and IIC component |
| ? | NC_000913 | 4465532 = | 109 (0.850) | coding (649/1422 nt) | treB | trehalose‑specific PTS enzyme: IIB and IIC component | |||||
| * | ? | NC_000913 | = 4457195 | 145 (1.030) | 8 (0.060) | 8/164 | NT | 5.4% | noncoding (11/84 nt) | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | = 4457211 | 145 (1.120) | noncoding (27/84 nt) | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 4417460 | 138 (0.980) | 8 (0.060) | 6/164 | NT | 5.7% | coding (509/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | = 4417479 | 137 (1.050) | coding (528/750 nt) | yjfP | acyl CoA esterase | |||||