mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1154 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4639660 | 127 (0.840) | 4 (0.030) | 3/168 | NT | 3.2% | coding (647/717 nt) | arcA | response regulator in two‑component regulatory system with ArcB or CpxA |
| ? | NC_000913 | = 4639689 | 126 (0.890) | coding (618/717 nt) | arcA | response regulator in two‑component regulatory system with ArcB or CpxA | |||||
| * | ? | NC_000913 | = 4636885 | 156 (1.040) | 11 (0.080) | 5/168 | NT | 6.8% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 154 (1.090) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4631855 | 154 (1.020) | 10 (0.070) | 3/166 | NT | 6.5% | coding (1123/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4631875 | 142 (1.010) | coding (1143/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||
| * | ? | NC_000913 | = 4626890 | 157 (1.040) | 3 (0.020) | 5/168 | NT | 1.9% | coding (979/1383 nt) | radA | DNA repair protein |
| ? | NC_000913 | = 4626901 | 162 (1.140) | coding (990/1383 nt) | radA | DNA repair protein | |||||
| * | ? | NC_000913 | = 4618403 | 152 (1.010) | 8 (0.060) | 6/166 | NT | 5.1% | coding (175/1323 nt) | deoA | thymidine phosphorylase |
| ? | NC_000913 | = 4618416 | 156 (1.110) | coding (188/1323 nt) | deoA | thymidine phosphorylase | |||||
| * | ? | NC_000913 | 4618029 = | 170 (1.130) | 9 (0.060) | 6/166 | NT | 5.3% | coding (707/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked |
| ? | NC_000913 | 4618065 = | 163 (1.160) | coding (743/780 nt) | deoC | 2‑deoxyribose‑5‑phosphate aldolase, NAD(P)‑linked | |||||
| * | ? | NC_000913 | = 4602165 | 146 (0.970) | 18 (0.130) | 8/164 | NT | 11.4% | coding (694/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | = 4602178 | 145 (1.050) | coding (681/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | 4601572 = | 175 (1.160) | 7 (0.050) | 7/162 | NT | 4.5% | intergenic (‑55/+52) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein |
| ? | NC_000913 | 4601608 = | 135 (0.990) | intergenic (‑91/+16) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein | |||||
| * | ? | NC_000913 | 4597603 = | 175 (1.160) | 10 (0.070) | 8/162 | NT | 6.4% | coding (1839/2292 nt) | opgB | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble) |
| ? | NC_000913 | 4597636 = | 131 (0.960) | coding (1806/2292 nt) | opgB | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble) | |||||
| * | ? | NC_000913 | = 4596277 | 198 (1.320) | 10 (0.070) | 8/168 | NT | 4.9% | coding (288/1023 nt) | lgoD | L‑galactonate oxidoreductase; L‑gulonate oxidoreductase |
| ? | NC_000913 | = 4596288 | 198 (1.400) | coding (299/1023 nt) | lgoD | L‑galactonate oxidoreductase; L‑gulonate oxidoreductase | |||||