mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 2,534,116 | 1 | . | T | 57.1% | 20.7 / 19.9 | 14 | coding (1507/2016 nt) | ligA | DNA ligase, NAD(+)‑dependent |
| * | W3110S.gb | 1,331,994 | 0 | C | T | 56.8% | 37.3 / 158.3 | 118 | Q317* (CAG→TAG) | sohB | predicted inner membrane peptidase |
| * | W3110S.gb | 3,348,578 | 0 | C | . | 47.5% | 268.7 / 221.9 | 122 | coding (272/633 nt) | yrbL | hypothetical protein |
| * | W3110S.gb | 1,251,803 | 1 | . | A | 36.4% | 129.8 / 191.7 | 118 | coding (613/1071 nt) | dhaK | dihydroxyacetone kinase, N‑terminal domain |
| * | W3110S.gb | 3,689,445 | 0 | G | A | 30.2% | 124.9 / 73.8 | 86 | D244N (GAT→AAT) | hdfR | DNA‑binding transcriptional regulator |
| * | W3110S.gb | 715,631 | 1 | . | A | 29.5% | 199.1 / 127.8 | 105 | intergenic (+11/‑203) | pgm/ybfP | phosphoglucomutase/hypothetical protein |
| * | W3110S.gb | 715,631 | 2 | . | A | 29.5% | 199.3 / 127.5 | 105 | intergenic (+11/‑203) | pgm/ybfP | phosphoglucomutase/hypothetical protein |
| * | W3110S.gb | 2,992,354 | 0 | G | T | 26.4% | 132.1 / 35.6 | 53 | G21C (GGT→TGT) | ygeI | hypothetical protein |
| * | W3110S.gb | 3,664,818 | 0 | C | A | 20.4% | 128.5 / 19.9 | 44 | V202F (GTC→TTC) | rffD | UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase |
| * | W3110S.gb | 3,664,820 | 1 | . | G | 20.4% | 114.0 / 38.6 | 44 | coding (602/1263 nt) | rffD | UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase |