mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 51 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4161725 | 23 (0.330) | 9 (0.010) | 4/122 | 4.3 | 39.2% | intergenic (+41/‑260) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | KX077536 | = 8154 | 7 (0.000) | intergenic (+79/–) | unknown/– | cat/– | |||||
| * | ? | CP009273 | = 4161725 | 23 (0.330) | 9 (0.000) | 4/122 | 4.3 | 1.7% | intergenic (+41/‑260) | rrfB/murB | 5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding |
| ? | Exported | = 2325 | 1007 (0.060) | intergenic (+91/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
| * | ? | CP009273 | 360232 = | 89 (1.270) | 9 (0.010) | 4/122 | 4.3 | 17.0% | intergenic (‑166/+429) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | KX077536 | = 8154 | 7 (0.000) | intergenic (+79/–) | unknown/– | cat/– | |||||
| * | ? | CP009273 | 360232 = | 89 (1.270) | 9 (0.000) | 4/122 | 4.3 | 1.6% | intergenic (‑166/+429) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
| ? | Exported | = 2325 | 1007 (0.060) | intergenic (+91/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
| * | ? | CP009273 | 1427269 = | NA (NA) | 4 (0.060) | 3/126 | 4.9 | NA | intergenic (+26/+72) | tfaR/pinR | Rac prophage; putative tail fiber assembly protein/Rac prophage; putative site‑specific recombinase |
| ? | CP009273 | 1427279 = | NA (NA) | intergenic (+36/+62) | tfaR/pinR | Rac prophage; putative tail fiber assembly protein/Rac prophage; putative site‑specific recombinase | |||||
| * | ? | CP009273 | = 2060834 | NA (NA) | 3 (0.000) | 3/134 | 5.1 | 0.15% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | KX077536 | = 3561 | 1997 (1.180) | intergenic (+162/‑543) | unknown/unknown | transposase/cbbM | |||||
| * | ? | Exported | 3013 = | 25154 (1.360) | 27 (0.000) | 8/130 | 9.6 | 0.11% | intergenic (+779/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– |
| ? | Exported | 3022 = | 25337 (1.410) | intergenic (+788/–) | fdh/– | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag/– | |||||
| * | ? | Exported | = 854 | 7590 (0.410) | 27 (0.000) | 8/130 | 9.6 | 0.37% | intergenic (‑62/‑157) | aadA/fdh | aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag |
| ? | Exported | = 858 | NA (NA) | intergenic (‑66/‑153) | aadA/fdh | aminoglycoside adenylyltransferase (Murphy, 1985)/formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag | |||||
| * | ? | Exported | 624 = | 22406 (1.210) | 16 (0.000) | 7/120 | 9.7 | 0.082% | coding (169/792 nt) | aadA | aminoglycoside adenylyltransferase (Murphy, 1985) |
| ? | Exported | 639 = | 18803 (1.130) | coding (154/792 nt) | aadA | aminoglycoside adenylyltransferase (Murphy, 1985) | |||||
| * | ? | Exported | = 1517 | 21912 (1.180) | 10 (0.000) | 7/128 | 9.9 | 0.048% | coding (507/1224 nt) | fdh | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag |
| ? | Exported | = 1520 | 20550 (1.160) | coding (510/1224 nt) | fdh | formate dehydrogenase from Pseudomonas sp. 101 with an N‑terminal his‑tag | |||||