mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1255 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4627073 | 527 (0.850) | 3 (0.010) | 3/106 | NT | 0.58% | coding (561/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon |
| ? | CP009273 | = 4627112 | 524 (0.890) | coding (600/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon | |||||
| * | ? | CP009273 | = 4623085 | NA (NA) | 3 (0.010) | 3/98 | NT | 0.50% | coding (478/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | CP009273 | = 4623107 | 594 (1.100) | coding (456/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | CP009273 | 4622533 = | 1067 (1.720) | 3 (0.010) | 3/98 | NT | 0.33% | intergenic (+46/‑44) | slt/trpR | lytic murein transglycosylase, soluble/transcriptional repressor, tryptophan‑binding |
| ? | CP009273 | 4622558 = | 883 (1.630) | intergenic (+71/‑19) | slt/trpR | lytic murein transglycosylase, soluble/transcriptional repressor, tryptophan‑binding | |||||
| * | ? | CP009273 | = 4620353 | 494 (0.800) | 12 (0.020) | 4/94 | NT | 2.7% | intergenic (‑14/‑197) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble |
| ? | CP009273 | = 4620382 | 450 (0.870) | intergenic (‑43/‑168) | yjjK/slt | putative transporter subunit of ABC superfamily: ATP‑binding component/lytic murein transglycosylase, soluble | |||||
| * | ? | CP009273 | = 4616602 | 839 (1.360) | 3 (0.010) | 3/98 | NT | 0.48% | coding (874/1383 nt) | radA | DNA repair protein |
| ? | CP009273 | = 4616706 | 513 (0.950) | coding (978/1383 nt) | radA | DNA repair protein | |||||
| * | ? | CP009273 | 4615686 = | 739 (1.190) | 5 (0.010) | 3/98 | NT | 0.77% | intergenic (+6/‑43) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein |
| ? | CP009273 | 4615706 = | 637 (1.180) | intergenic (+26/‑23) | serB/radA | 3‑phosphoserine phosphatase/DNA repair protein | |||||
| * | ? | CP009273 | = 4615369 | 495 (0.800) | 3 (0.010) | 3/98 | NT | 0.59% | coding (658/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | CP009273 | = 4615502 | 570 (1.050) | coding (791/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | CP009273 | = 4615358 | 488 (0.790) | 5 (0.010) | 4/94 | NT | 1.2% | coding (647/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | CP009273 | = 4615477 | 402 (0.770) | coding (766/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | CP009273 | 4613733 = | 617 (1.000) | 5 (0.010) | 4/100 | NT | 0.90% | coding (202/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | CP009273 | 4613760 = | 549 (0.990) | coding (175/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | CP009273 | 4610977 = | 632 (1.020) | 3 (0.010) | 3/96 | NT | 0.62% | coding (278/720 nt) | deoD | purine‑nucleoside phosphorylase |
| ? | CP009273 | 4611006 = | 417 (0.790) | coding (307/720 nt) | deoD | purine‑nucleoside phosphorylase | |||||