mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 76 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6173359 = | 92 (1.540) | 4 (0.070) | 3/228 | NT | 4.5% | coding (1336/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| ? | NC_002947 | 6173391 = | 81 (1.420) | coding (1304/1368 nt) | glmU | bifunctional N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase | |||||
| * | ? | NC_002947 | = 5962133 | 69 (1.150) | 3 (0.050) | 3/228 | NT | 4.5% | coding (973/1248 nt) | lysA‑II | diaminopimelate decarboxylase |
| ? | NC_002947 | = 5962155 | 62 (1.090) | coding (995/1248 nt) | lysA‑II | diaminopimelate decarboxylase | |||||
| * | ? | NC_002947 | 5933579 = | 69 (1.150) | 3 (0.050) | 3/230 | NT | 4.8% | coding (454/555 nt) | PP_5201 | hypothetical protein |
| ? | NC_002947 | 5933609 = | 53 (0.920) | coding (424/555 nt) | PP_5201 | hypothetical protein | |||||
| * | ? | NC_002947 | 5791910 = | 57 (0.950) | 3 (0.050) | 3/234 | NT | 5.0% | intergenic (‑137/+58) | hemE/gltD | uroporphyrinogen decarboxylase/glutamate synthase subunit beta |
| ? | NC_002947 | 5791939 = | 59 (1.010) | intergenic (‑166/+29) | hemE/gltD | uroporphyrinogen decarboxylase/glutamate synthase subunit beta | |||||
| * | ? | NC_002947 | = 5759491 | 36 (0.600) | 4 (0.090) | 3/176 | NT | 11.9% | intergenic (+44/+112) | trmL/secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB |
| ? | NC_002947 | = 5759519 | 33 (0.750) | intergenic (+72/+84) | trmL/secB | tRNA (cytosine(34)‑2'‑O)‑methyltransferase TrmL/protein‑export protein SecB | |||||
| * | ? | NC_002947 | 5722218 = | 64 (1.070) | 3 (0.050) | 3/226 | NT | 5.0% | coding (102/735 nt) | glnQ | glutamine transport ATP‑binding protein GlnQ |
| ? | NC_002947 | 5722249 = | 54 (0.960) | coding (71/735 nt) | glnQ | glutamine transport ATP‑binding protein GlnQ | |||||
| * | ? | NC_002947 | 5596996 = | 61 (1.020) | 3 (0.050) | 3/234 | NT | 4.6% | coding (446/1434 nt) | PP_4923 | outer membrane efflux protein |
| ? | NC_002947 | 5597018 = | 64 (1.100) | coding (468/1434 nt) | PP_4923 | outer membrane efflux protein | |||||
| * | ? | NC_002947 | = 5582863 | 50 (0.840) | 2 (0.030) | 4/230 | NT | 4.2% | coding (534/756 nt) | PP_4911 | hypothetical protein |
| ? | NC_002947 | = 5582873 | 44 (0.770) | coding (524/756 nt) | PP_4911 | hypothetical protein | |||||
| * | ? | NC_002947 | = 5571471 | 59 (0.990) | 3 (0.060) | 3/212 | NT | 4.9% | intergenic (+42/+99) | queG/yicG | epoxyqueuosine reductase/inner membrane protein |
| ? | NC_002947 | = 5571528 | 64 (1.210) | intergenic (+99/+42) | queG/yicG | epoxyqueuosine reductase/inner membrane protein | |||||
| * | ? | NC_002947 | = 5379562 | 73 (1.220) | 3 (0.050) | 3/238 | NT | 4.2% | coding (1099/1674 nt) | recN | DNA repair/recombination protein |
| ? | NC_002947 | = 5379597 | 63 (1.060) | coding (1134/1674 nt) | recN | DNA repair/recombination protein | |||||