Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F232 I0 R1
|
243 |
156.3 |
7646460 |
93.8% |
7172379 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC |
NC_000913 |
3,596,220 |
(TCA)3→2 |
100% |
coding (182‑184/927 nt) |
livH ← |
branched‑chain amino acid ABC transporter permease |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3596215 = | 1 (0.010) | 134 (1.080) |
78/162 |
NT |
99.3% |
coding (189/927 nt) |
livH |
branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 |
= 3596211 |
1 (0.010) | coding (193/927 nt) |
livH |
branched‑chain amino acid ABC transporter permease |
Only 100 of 176 total aligned reads displayed.
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3596321‑3596215
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG < NC_000913/3596211‑3596114
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCT > 1:3356311/1‑100
CTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTG < 1:2489814/100‑1
CTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTG > 1:3785491/1‑100
TACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATCGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGA < 2:2034170/100‑1
ACACCATGGTTTACGGCATTATCGTCATGATCAACTTCTCCCACGGCGAGGTTTATATGATTGGCATTTACGTCTCATTTATGATCATCGCCGCGCTGAT < 2:2809914/100‑1
CACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATG > 2:661580/1‑100
aaCATGGTTTACGGCATTATCGGCCTGATCAACTTCGCCCAAGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATG < 1:1127461/97‑1
CCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGAT > 1:3729824/1‑100
CCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGAT > 1:1342358/1‑100
ATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGG < 2:3138216/100‑1
ATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGG < 1:2646459/100‑1
GTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCCGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCA > 1:3408794/1‑100
TTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCAT < 2:282448/100‑1
TTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATT > 1:3473627/1‑100
TACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTG > 1:3642868/1‑100
TACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTG < 1:673702/100‑1
TACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTG < 1:1035171/100‑1
TACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTG < 2:3430130/100‑1
ACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCGACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGA < 2:1756258/100‑1
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT > 1:147066/1‑100
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT < 2:3577011/100‑1
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT > 1:1938764/1‑100
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT < 2:3020128/100‑1
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT < 2:3733681/100‑1
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCGACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT < 2:285590/100‑1
GCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC > 1:792794/1‑100
GCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC > 1:3124897/1‑100
GCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC > 1:832489/1‑100
CATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACC < 1:1812481/100‑1
TTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGG > 1:330001/1‑100
TATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGC > 1:1531643/1‑100
GGCATGTTCAACTTCGCCCACGGCGATGTTTATATGATTGGCAGCTACGTCTCATGTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC < 2:3677697/100‑1
GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC > 1:2638022/1‑100
GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC < 2:2782765/100‑1
GCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC > 1:3213089/1‑99
CATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCT < 2:1647383/99‑1
ATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGG < 2:2127233/100‑1
TCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGT < 2:120144/100‑1
TCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGT < 1:2018533/100‑1
CAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTA > 1:1732385/1‑100
ACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGTTCATCTCCGCGCTGATGATGGGCATTGATACCTGCTGGCTGCTGGTAGC > 2:180661/1‑100
ACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGC > 1:3021620/1‑100
TCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGC < 2:832480/100‑1
CGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCG < 2:3704817/100‑1
CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 1:1894892/1‑100
CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 1:2385600/1‑100
CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 2:1737605/1‑100
CCCACGGCGAGGTTTATATGATTCGCCGCTACGTCTCCTTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 1:3603647/1‑100
CCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGA > 1:3445863/1‑100
CACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGAT > 1:2981034/1‑100
CACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGG < 2:1505093/97‑1
CGGTGAGGTTGATATGATTGGCAGCTACGTCTCATTTATGATCATCGGCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCGGCGGGA < 2:2102750/97‑1
GGCGAGGTTTCTATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 1:1788967/100‑1
GGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 1:3589865/100‑1
GCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGACGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGT > 1:2201913/1‑100
CGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTC < 2:2619810/100‑1
aAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCG < 1:2791729/99‑1
AGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGG < 1:1116046/100‑1
GTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCG < 1:1148181/100‑1
GTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCG < 2:3109817/100‑1
TATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCACTC > 2:3454998/1‑100
TATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATC > 2:1272053/1‑100
ATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCG > 1:1631598/1‑100
TTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCAT < 1:1009194/100‑1
gctcttccgaTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG < 1:1019235/90‑1
GGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG > 2:3658780/1‑100
GGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG > 1:1515035/1‑100
GGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG > 2:1054170/1‑100
CAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCC > 1:3285674/1‑100
AGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCA < 1:307001/100‑1
GCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCACTGCCAG > 2:3273329/1‑100
CTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTCGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGC > 2:263917/1‑100
ACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGC < 2:3808810/100‑1
CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 2:245478/1‑100
CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:717744/1‑100
CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 2:1189649/1‑100
TTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGCTTCGTCGGCGCAATAGTCATTGCCAGCGCCTACCGCT > 1:3616328/1‑100
TTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCT < 1:3332954/100‑1
TTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTG < 1:2880757/100‑1
TTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTG < 1:2543095/100‑1
TATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGG < 1:2286514/100‑1
ATGATCATCGCCGCGCTGATGAGGGGCATTGATACCGGCTGGCGGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGA < 2:1702906/100‑1
TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG > 2:623712/1‑100
TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG < 2:89132/100‑1
TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCGGCGTGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG < 2:3235438/100‑1
ATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTA < 1:3733713/100‑1
ATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTA > 1:1370144/1‑100
CATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATC > 2:2000616/1‑100
CATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATC > 1:127204/1‑100
ATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCG > 1:433345/1‑100
GCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACTGCTGGAGTATCGAAC > 1:3757222/1‑100
GCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGG < 2:3684141/100‑1
CGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGT < 2:801093/100‑1
CGCTGATGATGGGCATTGATACCGGCTGGCTGCGGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGT > 2:2246152/1‑100
TGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGC < 1:615637/100‑1
TGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGC < 1:1088544/100‑1
GATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCT > 1:55695/1‑100
GATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAATATCGAACGGGTGGCT > 2:2225701/1‑100
naGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCCGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACC > 2:3616596/3‑100
TGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG > 2:3215673/1‑100
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3596321‑3596215
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG < NC_000913/3596211‑3596114
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
