Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F110 I1 R1
|
51 |
90.5 |
4460762 |
96.5% |
4304635 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_000913 |
3,596,220 |
(TCA)3→2 |
coding (182‑184/927 nt) |
livH ← |
branched‑chain amino acid ABC transporter permease |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3596215 = | 2 (0.020) | 85 (1.010) |
64/182 |
0.2 |
97.8% |
coding (189/927 nt) |
livH |
branched‑chain amino acid ABC transporter permease |
| ? | NC_000913 |
= 3596211 |
2 (0.020) | coding (193/927 nt) |
livH |
branched‑chain amino acid ABC transporter permease |
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3596321‑3596215
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG < NC_000913/3596211‑3596114
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCT > 1:810459/1‑100
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCT < 1:512635/100‑1
CTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTG < 1:1037842/100‑1
CTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTG < 2:1105752/100‑1
CACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATG < 1:2226964/100‑1
ACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGA < 2:521344/100‑1
nCATGGTTTACGGCATTATCGGCATGATCAACTTCGCACACGGCGAGGTATATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGAT > 1:1192904/2‑100
CCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGAT > 2:1635871/1‑100
CATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG > 2:2138079/1‑100
GTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCA > 2:1622671/1‑100
GTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCA < 1:1758644/100‑1
TTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATT < 2:177849/100‑1
CGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGAT > 2:397406/1‑100
GGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATA < 1:384628/100‑1
GCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC > 2:2148372/1‑100
GCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC > 2:1145969/1‑100
CATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACC < 2:357941/100‑1
CATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACC > 1:177231/1‑100
CATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATAC > 2:193503/1‑99
ATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCG < 2:1989818/100‑1
ATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCG > 1:1324983/1‑100
TTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGG > 1:1920410/1‑100
TATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGC < 2:614591/100‑1
ATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCT < 2:1795377/100‑1
TCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTG < 2:726925/100‑1
TCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTG < 2:714086/100‑1
GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC < 2:1809509/100‑1
GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC > 1:1605639/1‑100
GGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGC > 1:652686/1‑100
GCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCT < 2:1605648/100‑1
ATGATCATCTTCGCCCACGTCGAGGTTTATATGATTAGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATTATGGGCATTGATACC > 1:675212/1‑90
TGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCT < 1:1840037/100‑1
GATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTG > 1:2077986/1‑100
ATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGG > 2:1079629/1‑100
TCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGT > 1:314647/1‑100
TCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGT > 1:1280459/1‑100
CAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTA < 1:805775/100‑1
ACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGC < 2:780678/100‑1
ACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGC > 2:787284/1‑100
CGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCG > 1:338162/1‑100
CGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTG < 1:224536/98‑1
GCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGG < 2:1324985/100‑1
CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 1:962076/1‑100
CCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGG > 2:1899685/1‑100
GGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 2:810460/100‑1
CGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTC > 1:1906818/1‑100
CGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCG < 1:598204/98‑1
GTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCG < 2:771664/100‑1
GTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCG < 2:153301/100‑1
GTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCG < 2:1589030/100‑1
TTTATATGATTGGCAGTTACGTCTCATTTATGATCTTCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGC < 1:1304118/100‑1
TTTATATGATTGGCAGCTACGTCTCATTTATGATGATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGTTTCATCGGCGC < 1:1171802/100‑1
TATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCTGCTGGCTGCTGGTAGCTGCGGGATTCGTTGGCGCAATC > 1:1562234/1‑100
TATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATC > 2:1559947/1‑100
ATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCG > 2:1818653/1‑100
ATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCG < 2:1818086/100‑1
ATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCG > 1:1625844/1‑100
TGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGT > 1:1626031/1‑100
TGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGT > 1:1012419/1‑100
ATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCA > 1:627448/1‑100
TTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCAT > 1:1481043/1‑100
TTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCAT < 2:1906828/100‑1
TGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATT < 2:338163/100‑1
GGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG < 2:1988043/100‑1
GGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG > 1:209207/1‑100
GGCAGCTACGTCTCATCTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTG < 1:1306775/100‑1
CAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCGATCGTCTTTTCC > 1:1965485/1‑100
CAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCC < 1:640749/100‑1
AGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCA < 2:1920420/100‑1
GCTACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAG < 1:190123/100‑1
TACGTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCACAATCGTCATTGCCAGCG > 2:967955/1‑100
GTCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCT > 2:1963741/1‑100
TCTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTA > 1:2011788/1‑100
CTCATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTAC > 2:1083870/1‑100
CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:1007966/1‑100
CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:164901/1‑100
CATTTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGG > 1:230632/1‑100
TTATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTG < 1:1418319/100‑1
ATGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGA > 1:906171/1‑100
TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG > 2:1688310/1‑100
TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG < 2:556694/100‑1
TGATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG < 2:1821702/100‑1
gtTCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAG < 1:397405/97‑1
GATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGT > 1:708909/1‑100
GATCATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGT > 2:534884/1‑100
CATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATC < 1:1927685/100‑1
ATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCG < 2:209207/100‑1
ATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCG < 1:1635862/100‑1
ATCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCG < 2:1579259/100‑1
TCGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGA > 2:2223867/1‑100
CGCCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAA > 1:1913410/1‑100
CCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCGGCGCCTACGGCTGGAGTATCGAACG < 2:2127753/100‑1
CCGCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACG > 2:515526/1‑100
GCGCTGATGATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGG > 1:2061249/1‑100
GATGATGGGCATTGATACCGGCTGGGTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGC < 2:798703/99‑1
taATGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTA < 2:1562242/98‑1
TGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG > 2:1533816/1‑100
TGGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG < 2:177231/100‑1
GCTACACCATGGTTTACGGCATTATCGGCATGATCAACTTCGCCCACGGCGAGGTTTATATGATTGGCAGCTACGTCTCATTTATGATCATCGCCGCGCTGATGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3596321‑3596215
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgatgatgGGCATTGATACCGGCTGGCTGCTGGTAGCTGCGGGATTCGTCGGCGCAATCGTCATTGCCAGCGCCTACGGCTGGAGTATCGAACGGGTGGCTTACCG < NC_000913/3596211‑3596114
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
