Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F212 I0 R1
|
246 |
122.0 |
6097616 |
93.1% |
5676880 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,352,460 |
T→G |
100% |
intergenic (+103/‑124) |
yjdJ → / → ghoS |
GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,352,460 | 0 | T | G | 95.1%
| 347.8
/ 3.7
| 106 | intergenic (+103/‑124) | yjdJ/ghoS | GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base G (58/42); total (61/45) |
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 115 total aligned reads displayed.
AGTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGA > NC_000913/4352364‑4352556
|
agTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgttt < 2:2292779/100‑1 (MQ=255)
gTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgtttt < 2:2164452/100‑1 (MQ=255)
gTACAGAGTCACGATATTTTTCATTATCTCAGCGATGTGATGAAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGGAGAGAGCGCGgtt > 2:1454337/1‑98 (MQ=255)
tACAGTGTCATGATATTTTTCATTCTCTCCGCGATGTTATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgttttt < 1:2331788/100‑1 (MQ=255)
tACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCGGAGAGCGCGgttttt > 1:2471323/1‑100 (MQ=255)
tACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgttttt < 1:1722239/100‑1 (MQ=255)
tACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgttttt < 2:1170765/100‑1 (MQ=255)
tACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgttttt < 1:1608387/100‑1 (MQ=255)
aCAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgtttttt < 1:2213758/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATTTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg < 2:590960/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg < 1:1032201/100‑1 (MQ=255)
gagTTACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg < 1:2399721/98‑1 (MQ=255)
agTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTcc < 2:705444/100‑1 (MQ=255)
agTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTcc > 2:699991/1‑100 (MQ=255)
cACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCaa < 1:2315400/100‑1 (MQ=255)
cACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCaa > 1:1250534/1‑100 (MQ=255)
aCGATGTTTTTCATTCTTTCCGCGATGTGATCCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAg < 2:810398/100‑1 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAg < 1:1526383/100‑1 (MQ=255)
aCGATATTTTTAATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGTGGTTTTTTGTCCCAAg < 2:382791/100‑1 (MQ=255)
cGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCTCa > 2:2524864/1‑97 (MQ=255)
cGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGt < 2:2267077/100‑1 (MQ=255)
cGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGt > 1:1760640/1‑100 (MQ=255)
cGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGATTTTTGTCCCAAGt > 1:2896266/1‑100 (MQ=255)
gATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGAGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTGCCAAGt > 1:2604698/1‑99 (MQ=255)
tatTTTTCATTCTCTCCGCGATGTGAGTCAGGAGAGCATCTGAAGGGTAGGGGGATGTACAAAGAATGGTCATAGAGCGTTTTTTTTTGTCCGAAGTc < 2:2878609/98‑1 (MQ=255)
atTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTGTGTCCCAAGTCATc > 2:2066481/1‑100 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATccc > 1:27195/1‑100 (MQ=255)
ttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCt > 1:813721/1‑100 (MQ=255)
tCATTCTCTCCGAGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCATAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCtt < 2:2276892/100‑1 (MQ=255)
ttCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTAc > 1:392752/1‑100 (MQ=255)
ttCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTAc < 2:861568/100‑1 (MQ=255)
tctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACt > 2:851246/1‑100 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGTATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTg < 1:1635070/100‑1 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTg < 1:2485774/100‑1 (MQ=255)
tttgagcgATGTGATTCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTg < 2:1772639/94‑1 (MQ=255)
ctcCGCTATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAg < 1:2771522/100‑1 (MQ=255)
ctcCGCGATGTGATGCAGGAGAGCATCTGAAGTGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAg < 2:2507119/100‑1 (MQ=255)
ctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGa > 2:853791/1‑99 (MQ=255)
ctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAg > 1:2172089/1‑100 (MQ=255)
ccGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCa > 2:2587733/1‑100 (MQ=255)
cgcgATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCaa > 2:2259940/1‑100 (MQ=255)
cgATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCaaaa < 1:1615820/100‑1 (MQ=255)
tgtgATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTTTCCCAAGTCATCCCCTTTACTGAGCaaaaaaa > 2:1109476/1‑100 (MQ=255)
gtgATGCAAGAGAGCATATGAAGTGTTGGTTTATGTATAAAGAATGGGCAGAGAGCGCTGTTTTTTGTCCCAAGTTATCCCTTATAAAGAGaaaaaa < 2:2468955/97‑1 (MQ=255)
gATGCAGGTGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGa > 1:2199473/1‑100 (MQ=255)
gATGCAGGTGAGCATCTGAAGGGTACGGGGATGCACAAATAATGTGCAGAGAGCGCGTTTTTTTGTTCCAAGTTTTTTTCTTTACTGAGCAAAAAAAAGa < 2:570028/100‑1 (MQ=255)
gATGCAGCAGAGCATCTGAAAGGAAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTACCAAGTCATCCGCTTTACTGAGCAAAAAAAAGa > 2:730828/1‑100 (MQ=255)
tGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGaa > 1:2230688/1‑99 (MQ=255)
tGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAat > 2:914227/1‑100 (MQ=255)
tGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAat < 1:914233/100‑1 (MQ=255)
tGCAGGAGAGCATCTGAAGGGTAGGGGGATGAACAAAGACTGGGTCGAGAGAGCGGTTTTTTGTCCCAAGTCCTCCCCTTTCCTGAGCAAAAAAAAGAat < 1:1356576/100‑1 (MQ=255)
gCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAata > 1:1546577/1‑100 (MQ=255)
cAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAatat > 1:2237431/1‑100 (MQ=255)
gagCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCt > 1:1801355/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAACAAAGAATATCTCCtat > 2:1268429/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 2:1782050/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 1:1080639/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 1:2996096/1‑100 (MQ=255)
cATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtata > 2:1539145/1‑100 (MQ=255)
aTCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGATCGCGTTTTTTTGTCCCAAGTCATCCCCGTTACTGAGCAAAAAAAAGAATATCTCCTatat < 1:40600/100‑1 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGTCAGAGAGCGCGGTTTTTTTTTTTTTTTTTTCCCCTTTAAGGAGCAAAAAAAATAATATCGGTTATATgtg > 2:3035618/1‑98 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgag < 1:2939288/100‑1 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCACCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgag > 1:2811578/1‑100 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATAACCTTTACTGAGAAAAAAAAAGAATATATACTATATga > 1:1115516/1‑99 (MQ=255)
aaGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGaa < 1:2439094/100‑1 (MQ=255)
aGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAat < 2:2101584/100‑1 (MQ=255)
gggTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatc > 2:1256644/1‑100 (MQ=255)
gggTAGGGGGATGCACAAAGAATGGGCAGAAAGCGCGGTTTTTTATCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATAAGAatc > 2:941337/1‑100 (MQ=255)
ggTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatca > 1:1190391/1‑100 (MQ=255)
gTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcat > 2:1897237/1‑100 (MQ=255)
gATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCgg > 1:286365/1‑100 (MQ=255)
tGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCgggg < 1:2526436/100‑1 (MQ=255)
gCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATAggg > 1:2009048/1‑98 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTTTTTTAATTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:1452094/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 1:393291/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:730943/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 1:506410/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:1904487/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAACGCGGTTTTTTGTCAAAAGTCATCCCCTTAACTGAGCAAAAAAAAGAATATATCCTATATGAGAATCATCAAt > 2:1040769/1‑93 (MQ=255)
aaaGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCCTCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaat < 2:2238403/100‑1 (MQ=255)
aaaGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaa < 1:1876635/99‑1 (MQ=255)
ggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGtttt > 1:1303157/1‑99 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATTAATCGGGGTTAATAAGTTTTg < 2:475741/100‑1 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 2:203418/100‑1 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 1:2085915/100‑1 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg > 2:2272331/1‑100 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTAACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGttt < 2:2967764/98‑1 (MQ=255)
cAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg < 1:85743/100‑1 (MQ=255)
cAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg > 2:2882033/1‑100 (MQ=255)
cAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg < 2:392749/100‑1 (MQ=255)
atagagCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg < 2:2834898/97‑1 (MQ=255)
agagagCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAATAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg < 1:2629639/99‑1 (MQ=255)
agagaaCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg < 2:2565652/99‑1 (MQ=255)
agagCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTcc < 2:1563396/100‑1 (MQ=255)
gagCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAG‑TTTGCGTaccc > 2:2494022/1‑100 (MQ=255)
agCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTcccc < 1:3024307/100‑1 (MQ=255)
gcgcGGTTTTTTGTTCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCa > 2:1021138/1‑100 (MQ=255)
gcgcGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCa > 1:2972683/1‑100 (MQ=255)
cgcgGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCag > 1:2069211/1‑100 (MQ=255)
gcgGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCaga > 1:2312165/1‑100 (MQ=255)
|
AGTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGA > NC_000913/4352364‑4352556
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
