Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F56 I0 R1
|
215 |
141.2 |
6785521 |
95.3% |
6466601 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,352,460 |
T→G |
67.3% |
intergenic (+103/‑124) |
yjdJ → / → ghoS |
GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,352,460 | 0 | T | G | 67.3%
| 186.3
/ 116.3
| 132 | intergenic (+103/‑124) | yjdJ/ghoS | GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA |
| Reads supporting (aligned to +/- strand): ref base T (28/15); new base G (43/45); total (71/61) |
| Fisher's exact test for biased strand distribution p-value = 9.44e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 138 total aligned reads displayed.
GTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGCG > NC_000913/4352365‑4352559
|
tACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGgttttt < 1:20827/100‑1 (MQ=255)
aCAGGGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGGGCATCTGAAGGGTAGGGGGATGCACAACGAATGGGCAGAGAGCTCGgtttt < 1:918960/98‑1 (MQ=255)
aCAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGttttttt < 1:2411811/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTg < 2:2092486/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg < 1:2353295/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg > 2:2072589/1‑100 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg < 1:2937364/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg > 2:2073155/1‑100 (MQ=255)
gagTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTc > 1:1894396/1‑100 (MQ=255)
agTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTcc < 2:2375750/100‑1 (MQ=255)
gTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTccc < 2:1890684/100‑1 (MQ=255)
gTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTccc < 2:1386483/100‑1 (MQ=255)
gTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTccc > 2:737456/1‑100 (MQ=255)
gTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTccc < 2:1005704/100‑1 (MQ=255)
tCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCa < 1:1738078/100‑1 (MQ=255)
cACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCaa > 1:1014912/1‑100 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAg > 1:1222363/1‑100 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAg < 2:2393173/100‑1 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAg > 2:2896808/1‑100 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAg < 1:2645168/100‑1 (MQ=255)
cGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGt < 2:1165417/100‑1 (MQ=255)
cGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCTCAAGt > 1:1432290/1‑100 (MQ=255)
atatTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCa > 1:1026095/1‑100 (MQ=255)
atatTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCa < 1:1497434/100‑1 (MQ=255)
atTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATc > 2:2671366/1‑100 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATccc > 1:985721/1‑100 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATccc > 2:3252579/1‑100 (MQ=255)
ttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCt > 2:2514185/1‑100 (MQ=255)
cATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCttt > 1:61897/1‑100 (MQ=255)
cATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCttn < 1:32165/100‑2 (MQ=255)
aTTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTa < 1:1937900/100‑1 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTg < 1:1472323/100‑1 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGACCGTTTTTTTGTCGCAAGTCATGCCTTTTACTg > 1:2500305/1‑100 (MQ=255)
tcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGc > 1:2184998/1‑100 (MQ=255)
ccGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCa > 1:2734809/1‑100 (MQ=255)
tgATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAg > 2:2112204/1‑100 (MQ=255)
gATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCCGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGa > 2:452505/1‑100 (MQ=255)
atctaGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGaa < 1:2359184/96‑1 (MQ=255)
aGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATAtc < 2:598678/100‑1 (MQ=255)
agagCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGACTATCTcc < 2:1770279/100‑1 (MQ=255)
agcaaatGAAGGGTAGGGGAATGCACAAAGAATGGGCAGAAAGCGCAGTTTTTTGTCCTAAGTCATCCAATATAAAAAAAAAAAAAAAGAATATCTCCt < 1:1198716/93‑1 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 2:1601329/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 1:208153/1‑100 (MQ=255)
cATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtata > 1:378369/1‑100 (MQ=255)
cATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtata < 1:1049932/100‑1 (MQ=255)
cATCTAAAGGGTAGGGGGATGCCCAAAGAATGGGCAGAGAGCGCGGTTCTTTGTCCCAAGTCATCCCCTTTACTAAGCAAAAAAAAGAATATCTCCt < 1:520621/97‑1 (MQ=255)
tCTGAAGGGTAGGGGGATGCACAAAGAATGGGCATAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATg < 1:1553252/100‑1 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgag < 2:904189/100‑1 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgag < 2:1077312/100‑1 (MQ=255)
gAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgaga > 1:600937/1‑100 (MQ=255)
gAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgaga > 2:1714784/1‑100 (MQ=255)
gAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTTTTTTTTTTCTTCACCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgaga > 1:1506955/1‑100 (MQ=255)
gAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgaga < 2:2649195/100‑1 (MQ=255)
gAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgaga > 2:1953967/1‑100 (MQ=255)
gAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgaga > 1:602144/1‑100 (MQ=255)
aaGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGaa < 2:1986860/100‑1 (MQ=255)
aaGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGaa < 2:318778/100‑1 (MQ=255)
gggTAGGGGGATGCACAAAGAATGGGCCGAGAGCGCGGTTTTTTGTCTCATGTCATCCCCTTTATGGAGCAATAAAAGGAATATCTCCTATGTGaaaa > 1:2891954/1‑98 (MQ=255)
ggTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatca > 2:1824210/1‑100 (MQ=255)
gTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcat > 2:2177113/1‑100 (MQ=255)
tAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcatc < 2:1704004/100‑1 (MQ=255)
aGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCAACTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcatc < 1:2010964/99‑1 (MQ=255)
gggggATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCaa > 2:1153872/1‑100 (MQ=255)
gggggATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCaa > 2:2692726/1‑100 (MQ=255)
ggggATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTTTTTTTTTTTTTCCCCTATACTGGGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAAt > 1:645838/1‑100 (MQ=255)
ggtaTGCACAAAGAATGGGCAGGTAGCGCGGTTTTTTGTCCCACGTCACCACTTTTACTGAGCAAAAAAAAGAATATCGCCTATATGAGAAtcatca < 1:2984755/94‑1 (MQ=255)
gggATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATc > 1:2210419/1‑100 (MQ=255)
gggATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAAt > 1:2407597/1‑99 (MQ=255)
gggATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATc > 2:1886476/1‑100 (MQ=255)
gCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGt > 2:1472327/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt < 2:3011460/100‑1 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt < 1:1049709/100‑1 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 1:3093620/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 1:428919/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:732856/1‑100 (MQ=255)
acaAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCACCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATAGGGGTta > 1:100771/1‑100 (MQ=255)
caAAGAATGGGCAGAGAGCGCGTTTTTTTTTTTTTTTTTATCCCCTTTACCGAGCAAAACATAGCATCTCTTCTTTTGTTGAATCATCCATCGGAGt > 1:3212640/1‑97 (MQ=255)
caAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaa > 2:2570655/1‑100 (MQ=255)
aaaGAATGGGCAGATAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTAAAAAAAAAAAAGAATATCTCCTATATGTGAATCATCAATCGGGGtt < 1:1054574/97‑1 (MQ=255)
aGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaataa < 2:484507/100‑1 (MQ=255)
aGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGACCAAAAAAAAGCATATCTCCTATATGAGAATCATCAATCGGGTTtaataa > 1:1077791/1‑100 (MQ=255)
tGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGttt > 1:2190032/1‑100 (MQ=255)
gggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGtttt < 2:3280487/100‑1 (MQ=255)
ggCAGATAGCGCGGTTTTTTGTCCCAATTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 1:2882893/100‑1 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGtttt > 1:713602/1‑99 (MQ=255)
ggCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 1:732853/100‑1 (MQ=255)
gCAGAGAGCGCGTTTTTTTGTCCCAAGTAATCCACTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAAGCCAAAAGCAGGGTTAATAAGTTTTGc > 1:665460/1‑100 (MQ=255)
gCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGc < 2:2159942/100‑1 (MQ=255)
agagagCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGt > 2:1963259/1‑100 (MQ=255)
gagagCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTc > 1:1687647/1‑100 (MQ=255)
gagCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTccc < 1:2587914/100‑1 (MQ=255)
agCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTcccc < 2:1886222/100‑1 (MQ=255)
gcgcGTTTTTTTGTCCCAAGTCATCCCTTTAACAAAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTcccc < 1:1338675/99‑1 (MQ=255)
gcgcGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCa > 2:1361170/1‑100 (MQ=255)
gcgcGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCTGAGTAAATAAGTTTTGCTTCCCCa > 1:122742/1‑100 (MQ=255)
cgcgTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCag > 2:983818/1‑100 (MQ=255)
gcgGTTTTTTGTCCCATGTCATCCCATTTACTGAGCAAAAAAAAAAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGtgc > 1:1097417/1‑93 (MQ=255)
cgTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCagag > 2:240814/1‑100 (MQ=255)
gTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGc > 2:2346607/1‑100 (MQ=255)
tttttttGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGCg < 2:2958732/100‑1 (MQ=255)
|
GTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGCG > NC_000913/4352365‑4352559
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
