Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,352,460 |
T→G |
25.8% |
intergenic (+103/‑124) |
yjdJ → / → ghoS |
GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,352,460 | 0 | T | G | 25.8%
| 260.2
/ 121.4
| 162 | intergenic (+103/‑124) | yjdJ/ghoS | GNAT family putative N‑acetyltransferase/antitoxin of GhoTS toxin‑antitoxin pair; endonuclease for ghoT mRNA |
| Reads supporting (aligned to +/- strand): ref base T (65/55); new base G (25/17); total (90/72) |
| Fisher's exact test for biased strand distribution p-value = 5.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.73e-02 |
Only 100 of 174 total aligned reads displayed.
GAGAGTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGCG > NC_000913/4352361‑4352559
|
agagTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGtt > 1:4117179/1‑100 (MQ=255)
agTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGtttt < 1:3522599/100‑1 (MQ=255)
tACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGtttttt < 2:1527671/100‑1 (MQ=255)
tACAGAGTCACGATATTTTTCATTCGCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGTGGGATGCACAAAGAATGGGCAGAGAGCGCGgttttt < 2:4058331/100‑1 (MQ=255)
aCAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGttttttt < 2:3822964/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTg < 2:267328/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg < 1:1562618/100‑1 (MQ=255)
cAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTg > 1:2578092/1‑100 (MQ=255)
agagTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGt > 1:1045262/1‑100 (MQ=255)
agagTCACGATATTTTTCATTCGATCCGCGATGTGATTCAGGAGAGCATCTGAAGGGTAGGGGTATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTg < 2:1133912/99‑1 (MQ=255)
gagTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTc < 1:815217/100‑1 (MQ=255)
gTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTccc < 1:2142353/100‑1 (MQ=255)
cACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCaa > 1:1596142/1‑100 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAg < 1:2995060/100‑1 (MQ=255)
aCGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAg < 1:2628969/100‑1 (MQ=255)
gATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTc > 1:2726007/1‑100 (MQ=255)
gATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTc < 1:519396/100‑1 (MQ=255)
atatTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCa < 1:3763159/100‑1 (MQ=255)
atatTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCa > 1:1050260/1‑100 (MQ=255)
tatTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCAt > 1:3129102/1‑100 (MQ=255)
atTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATc < 2:1184344/100‑1 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATccc < 2:625855/100‑1 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATccc < 1:1609471/100‑1 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATccc > 1:483297/1‑100 (MQ=255)
ttttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATccc < 1:4106442/100‑1 (MQ=255)
tttCATTCTCTCCGTGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATcccc < 2:2817885/100‑1 (MQ=255)
tttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGACTGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATcccc < 1:2086821/100‑1 (MQ=255)
tttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATcccc < 2:698560/100‑1 (MQ=255)
tttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATcccc < 2:9588/100‑1 (MQ=255)
tttCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATcccc < 2:3587988/100‑1 (MQ=255)
cATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCttt > 1:2812586/1‑100 (MQ=255)
aTTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTa > 1:96916/1‑100 (MQ=255)
ttCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTAc < 1:3403962/100‑1 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTg < 1:2495219/100‑1 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTg < 1:385797/100‑1 (MQ=255)
ctctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTg < 2:3029613/100‑1 (MQ=255)
ctcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAg < 2:3719156/100‑1 (MQ=255)
tcCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGc > 2:3661875/1‑100 (MQ=255)
ccGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCa > 1:2201834/1‑100 (MQ=255)
cgcgATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTTTCCCAAGTCATCCCCTTTACTGAGCaa > 2:1556235/1‑100 (MQ=255)
gcgATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCaaa < 1:3029809/100‑1 (MQ=255)
tgATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAg < 1:203515/100‑1 (MQ=255)
tgATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATACCCTTTACTGAGCAAAAAAAAg > 2:1906097/1‑100 (MQ=255)
gATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGa < 1:3272871/100‑1 (MQ=255)
aTGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGaa > 2:3675076/1‑100 (MQ=255)
tGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAat > 2:1885760/1‑100 (MQ=255)
tGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAat < 1:3207822/100‑1 (MQ=255)
gCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAata < 2:566201/100‑1 (MQ=255)
cAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAACAAAAGAata > 2:384769/1‑99 (MQ=255)
agaagagCATCTGAAGGATAGGGGGAAGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCACGTCATCACCTTTACTGAGCAAAAAAACAAatat > 2:1094739/4‑99 (MQ=255)
ggAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATAtct > 1:2604387/1‑100 (MQ=255)
agagCATCTGAAGGGTAAGGGGAAGCACAAAGAATGCGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCTTAAAAAAAAAAAAAAAAAGAATATCTcc < 2:2289916/100‑1 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGTAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 1:1894778/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 2:85011/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 1:3619125/1‑100 (MQ=255)
gCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtat > 1:380305/1‑100 (MQ=255)
cATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCtata > 1:348812/1‑100 (MQ=255)
cTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTTTTTTTTTTTTTCCCATTAACTGAGCAAAAAAATTAATATCTCCttta > 2:738237/1‑97 (MQ=255)
cTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATga > 1:3754467/1‑100 (MQ=255)
tgtcgggTGGGGGGACACACAAAGAGGGGGAAGAGAGCGAGTTTTTTTGTCCTAAGTCATCCTCTTGATTGAAAAAAAAAAAGAATATCTCCTATATgag < 2:2429750/96‑1 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTTTTTTTTTTTTTCCCCTTTAATGAGCAAAAAAAAGAATATCTCCTATATg > 2:1953249/1‑98 (MQ=255)
tGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATgag > 1:231379/1‑100 (MQ=255)
aaGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGaa > 1:184433/1‑100 (MQ=255)
aGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCGCAAGTCATCCCCTGTAGTGAGCAAAAAAAAGAATAACTCCTATATGAGAat > 2:3825130/1‑100 (MQ=255)
gggTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatc > 2:2617102/1‑100 (MQ=255)
gggTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTTTTTTATTTCTTCCCCTTTACTGAGCAAAAAAAACAATATCTCCTATATga > 2:2017023/1‑95 (MQ=255)
gTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcat > 1:1678350/1‑100 (MQ=255)
tAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcatc > 1:2526980/1‑100 (MQ=255)
tAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAatcatc < 1:3888190/100‑1 (MQ=255)
ggggATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAAt > 1:3670399/1‑100 (MQ=255)
gggATGCACAAAGAATGGGCAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATc > 1:1800860/1‑100 (MQ=255)
gATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCgg < 1:149485/100‑1 (MQ=255)
aTGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCggg > 2:1071367/1‑100 (MQ=255)
aTGCACAAAGAATGCGCAGAGAGCGCGGTTTTTTGTCCAAAGTCATCACCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCgg < 1:2026734/99‑1 (MQ=255)
gCAAAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCATTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCgggg < 2:53019/99‑1 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:2244026/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:2827985/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:390340/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 1:3905945/1‑100 (MQ=255)
cacaAAGAATGGGCAGAGAGCGCGGTTTTTTTTTTTTTTTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGtt > 2:645849/1‑100 (MQ=255)
acaAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTta > 1:2847620/1‑100 (MQ=255)
caAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaa > 1:2693032/1‑100 (MQ=255)
aaaGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaat > 1:1830020/1‑100 (MQ=255)
aaGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaata > 1:1139187/1‑100 (MQ=255)
aGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTtaataa > 1:3985283/1‑100 (MQ=255)
aaTGTGCAGAGAGCGCGTTTTTTTGTCTCAAGTCATCTCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATTGGGGTTAATAAg < 2:4013188/99‑1 (MQ=255)
aTGGGCAGAGAGAGCGTTTTTTTGTCCCAAGTCATCCCCTTTAAAAAAAAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGtt < 2:3784299/100‑1 (MQ=255)
ggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 1:1189224/100‑1 (MQ=255)
ggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 2:3268714/100‑1 (MQ=255)
ggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 2:2361597/100‑1 (MQ=255)
ggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg < 1:807674/100‑1 (MQ=255)
ggCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTg > 2:1468370/1‑100 (MQ=255)
cAGAGAGCGCGGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCg > 1:2541034/1‑100 (MQ=255)
agagagCACGTGTGTTTGACTCATGTCAACTCCTTAAATGTTAAAAAAAATGAATAGCTCCTCTGTGAGAATCATCCATCTGTGCTAATAAGTTTTGCg < 2:777348/99‑1 (MQ=255)
agagCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTcc < 2:2997329/100‑1 (MQ=255)
agCGCGTTTTTTTGTCCCAAGTCATCCCCTTAAAAAAAAAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTcccc < 2:4012773/100‑1 (MQ=255)
gcgGTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCaga > 1:2203063/1‑100 (MQ=255)
cgTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCagag > 1:1354474/1‑100 (MQ=255)
gTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGc > 1:1965521/1‑100 (MQ=255)
tttttttGTCCCAATTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGATTAATAAGTTTTGCGTCCCCAGAGCg < 2:3029783/100‑1 (MQ=255)
|
GAGAGTACAGAGTCACGATATTTTTCATTCTCTCCGCGATGTGATGCAGGAGAGCATCTGAAGGGTAGGGGGATGCACAAAGAATGGGCAGAGAGCGCGTTTTTTTGTCCCAAGTCATCCCCTTTACTGAGCAAAAAAAAGAATATCTCCTATATGAGAATCATCAATCGGGGTTAATAAGTTTTGCGTCCCCAGAGCG > NC_000913/4352361‑4352559
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
