Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A19 F94 I1 R1 13 88.8 2980372 95.0% 2831353 148.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913_3_bme_pgi 3,486,574 C→A A152E (GCA→GAA)  crp → cAMP‑activated global transcription factor, mediator of catabolite repression

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_bme_pgi3,486,5740CA100.0% 185.2 / NA 63A152E (GCA→GAA) crpcAMP‑activated global transcription factor, mediator of catabolite repression
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (28/35);  total (28/35)

CGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACAC  >  NC_000913_3_bme_pgi/3486429‑3486719
                                                                                                                                                 |                                                                                                                                                 
cGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGaaaa                                                                                                                                                <  1:962583/149‑1 (MQ=255)
  ccAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACTTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAaac                                                                                                                                              <  2:1278696/149‑1 (MQ=255)
   cAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCCCAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGGGGGCACCCTGGCGTTCCTCGACGTGCCGGGCCGCATTGCACAGACTCTGCTGACTCTGGAAAaacc                                                                                                                                             >  1:526265/1‑148 (MQ=255)
    aaTTGATTCAGGTAACCCCGGACATTCTGATGCGTTTGTCTGCACAGAAGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAaacaa                                                                                                                                            <  1:938070/149‑1 (MQ=255)
    aaTTGATTCAGGTAAACCCGGACATTCTGATGCGTATGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAaacaa                                                                                                                                            <  1:506768/149‑1 (MQ=255)
    aaTTGATTCAGCTAAACCCGGACACGCTGAGGCGTTTGTCCGCACAGATGGCGCGTCGTCTGCAAGGCACTTCCGAGAAAGTGGTCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAaacca                                                                                                                                            <  2:872439/149‑3 (MQ=255)
    aaTTGATTAAGGTAAACCCGGACATTATGATTCGTTTGTCTGCACATATGGCGCTTAGTCTTCAAGTCACATCAGAGAAAGTGGGAAACATGCCGTTCCTCGACGTGACGGGCCGCATTGCAAAGAGTCTGGTGAATCTGTAAAaacaa                                                                                                                                            >  2:1317029/1‑149 (MQ=255)
     aTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAaacaac                                                                                                                                           <  2:550114/149‑1 (MQ=255)
     aTTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAaacaac                                                                                                                                           >  2:33333/1‑149 (MQ=255)
       tGATTCAGGTAAACCCGGACCTTCTGATGCGTGTGGCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCa                                                                                                                                         <  1:425997/149‑1 (MQ=255)
          ttCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGAc                                                                                                                                      <  1:856878/149‑1 (MQ=255)
               gTAAACTCGGACATTCTGTTGCGTTTGTCTGCACAGATGGCGCGGCGGCTGCTAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGTCGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTAt                                                                                                                                 <  1:73227/149‑1 (MQ=255)
               gTAAACCCGGACATTCTGATGCTTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAATTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTAt                                                                                                                                 <  1:1287654/149‑1 (MQ=255)
               gTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTAt                                                                                                                                 <  1:579921/149‑1 (MQ=255)
                               tGATGGGTTTGTCTGCACAGATGGCGCGTCTTCTGCAAGTGACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACTTGACGGGCAGCATTGAACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGt                                                                                                                 <  1:1358245/149‑1 (MQ=255)
                                       ttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAAt                                                                                                         <  1:1406861/149‑1 (MQ=255)
                                       ttGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAAt                                                                                                         <  1:1357052/149‑1 (MQ=255)
                                         gTCTGCACAGATGGCGAGTCGTCTGCAAGTCACTTCAGAGAAAGTGGTCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCAGGACGGTATGCAAATCa                                                                                                       >  1:825314/1‑149 (MQ=255)
                                          tCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCACGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCaa                                                                                                      >  1:236870/1‑149 (MQ=255)
                                          gcTGCACAGATGGCGCGGCGTCTGCAACTCACTTCAGAGAAAGTGGGCAACCGGGCGATCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCaa                                                                                                      <  2:265793/148‑1 (MQ=255)
                                           cTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCaaa                                                                                                     <  2:912371/149‑1 (MQ=255)
                                              cacaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAATCATCCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAAtt                                                                                                  >  2:1298773/1‑149 (MQ=255)
                                              cacaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAAtt                                                                                                  >  1:893716/1‑149 (MQ=255)
                                              cacaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTAAGACTCACCCGGCCGGTATGCAAATCAAAAtt                                                                                                  >  2:657587/1‑149 (MQ=255)
                                               acaGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGAAACCAGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTa                                                                                                 >  1:1085869/1‑149 (MQ=255)
                                                 aGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTAcc                                                                                               <  2:193746/149‑1 (MQ=255)
                                                  gATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTAccc                                                                                              <  1:481845/149‑1 (MQ=255)
                                                      gcgcGGCGCCTGCAAGTCACTTCAGAGAAAGTGGGCTCCCTGGCGTTCCTCGACGGGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCa                                                                                          <  2:477577/149‑1 (MQ=255)
                                                        gcgTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGTCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGATATTACTAACACGGACGGTATGCAAATCAAAATTAAACGTAAgg                                                                                        >  1:285336/1‑149 (MQ=255)
                                                                tGCAAGTCACTTCAGAGAAAGTGGGCAAGCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGt                                                                                <  1:902199/149‑1 (MQ=255)
                                                                 gCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTc                                                                               <  1:1159202/149‑1 (MQ=255)
                                                                 gCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAGTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACACGTCAGGAAATTGGTc                                                                               >  1:809623/1‑149 (MQ=255)
                                                                   aaGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATGGCACAGACTCTGCTGAATCTGGAAAAAAAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACAAGTCAGGAAATTGGTCAg                                                                             >  2:1150144/1‑149 (MQ=255)
                                                                    aGTTACTTCAGAGAATGTGGGCAACCTTGCGTTCCTAGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAATACAACCAGACGCTATGACTCTCCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGa                                                                            <  1:203046/149‑1 (MQ=255)
                                                                          ttCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGCCGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGAGTGTCg                                                                      >  1:1058049/1‑149 (MQ=255)
                                                                          ttCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCg                                                                      >  2:918565/1‑149 (MQ=255)
                                                                          ttCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCg                                                                      >  1:1134917/1‑149 (MQ=255)
                                                                          tgcAGAGCAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCAGTGCACAGACTCTGCTGAATCTGGAAAAACAACCCGCCGCTATGCCTCCCCCGGACGGTATGCACATCAAAATTACCCGTCTGGAAATTGGTCAGATTGTCg                                                                      >  2:1113286/3‑149 (MQ=255)
                                                                             agagAAAGTGGGCAACCGGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCt                                                                   <  2:1222045/149‑1 (MQ=255)
                                                                              gagaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTg                                                                  >  1:1470801/1‑149 (MQ=255)
                                                                               agaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCCCAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTAAGACTCTCCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGt                                                                 >  1:481656/1‑149 (MQ=255)
                                                                               agaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGt                                                                                            >  2:1266440/1‑122 (MQ=255)
                                                                               agaAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGt                                                                                            <  1:1266440/122‑1 (MQ=255)
                                                                                         cAACCTGGCGATCCTCGACGACACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAAACAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCTTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGaaa                                                       <  2:865546/149‑1 (MQ=255)
                                                                                             cTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGt                                                   <  1:33333/149‑1 (MQ=255)
                                                                                             cTGGCGGGCCTCGACGTGACGGGCCGCATTGAAGAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTGACCGGGACGGTATGCATATCAAAATTCCCCGTCAGGAAATTGGTCAGCTTGTCGGCTGTTCTCGTGAAACCGt                                                   <  2:526265/149‑1 (MQ=255)
                                                                                                      cTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAt                                          >  1:541552/1‑149 (MQ=255)
                                                                                                        cGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTc                                        <  2:1085869/149‑1 (MQ=255)
                                                                                                              gACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCCGCCGGTATGACTCACCCGGCCGGTTTCCAATGCAAATTTACCCGGATGGAATTTGTGCAGATTGTCGGCGGTTCACGTGAACCCGTGGGCCGCATTCTGAAgt                                  >  2:720712/1‑148 (MQ=255)
                                                                                                              gACGGGCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCATACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGACAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGa                                  >  2:497724/1‑149 (MQ=255)
                                                                                                                   gCCGCATTGCACAGACTCTGCTGAATCTGGAAAAACAACCAGCCGCTATGACTCACCCGGCCGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTg                             >  1:1221747/1‑149 (MQ=255)
                                                                                                                    gcGCATGGCCCAGCCTCGGCTGAATCTGGAAAAACACCCAGCCGCTATGACTCACCCTGACGGTAGGCAACTCAAAATTACCCGTCAGGAAATTGGTCAGCTTGTCGGCTGTTATCGTGAAACCGTGGGACGCATTCTGAAGATGCTgg                            <  2:877440/148‑1 (MQ=255)
                                                                                                                     ctcATTGCACATATTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCATATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGa                           <  1:1150144/147‑1 (MQ=255)
                                                                                                                         ttGCACAGACTCTGCTGAATGTTGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGAt                       <  1:561065/149‑1 (MQ=255)
                                                                                                                          tccacaGACTCTGCTGAATCTGGAAAAACAACCAGACCCTAAGACTCACCCGGACGGTAAGCAACTCAAAATTACCCGCCAGGAAATTGCTCAGATAGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATc                      <  2:220166/147‑1 (MQ=255)
                                                                                                                            cacaGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCAAGTGAAACCGTGGTACGCATTCTGAAGATGCTGGCAGATCAg                    >  1:978341/1‑149 (MQ=255)
                                                                                                                             acaGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGACGATCAGa                   >  2:1218705/1‑149 (MQ=255)
                                                                                                                             acaGACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCAGTCTGAAGATGCTGGAAGATCAGa                   >  1:1281960/1‑149 (MQ=255)
                                                                                                                              caGCCTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGGACATCAAAATTACCCGTCAGGAAATTGGGCAGATTGTCGGCGGTTCTCGTGAAACCGTGGTACGCTTTCTGAAGATGATGGCAGagccgac                  >  2:90564/1‑143 (MQ=255)
                                                                                                                                gACTCTGCTGAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAAcc                <  2:1134917/149‑1 (MQ=255)
                                                                                                                                    atgctgATTGTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGCCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGAt            <  2:596347/148‑1 (MQ=255)
                                                                                                                                     tgctgAATCTGGAAAAACAACCAGACGCTATGACTCACCCGGACGGTATCCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATGCTGACGATTCTGGAAGATCAGAAACTGAtc           <  2:280686/149‑1 (MQ=255)
                                                                                                                                           aTCAGGAAAAACAACCAGACGATATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTGCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGca     <  1:520384/149‑1 (MQ=255)
                                                                                                                                              tGGAAAAACAACCAGACGCTATGACTCCCCCGGACGGTATGCAAATCAAAATTACCGGTCAGGTAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGCACCTGATCTCCGcactc  >  1:831545/1‑147 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
CGCCAATTGATTCAGGTAAACCCGGACATTCTGATGCGTTTGTCTGCACAGATGGCGCGTCGTCTGCAAGTCACTTCAGAGAAAGTGGGCAACCTGGCGTTCCTCGACGTGACGGGCCGCATTGCACAGACTCTGCTGAATCTGGCAAAACAACCAGACGCTATGACTCACCCGGACGGTATGCAAATCAAAATTACCCGTCAGGAAATTGGTCAGATTGTCGGCTGTTCTCGTGAAACCGTGGGACGCATTCTGAAGATGCTGGAAGATCAGAACCTGATCTCCGCACAC  >  NC_000913_3_bme_pgi/3486429‑3486719

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A