Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F13 I0 R1
|
206 |
15500.2 |
9478722 |
98.3% |
9317583 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
3,925,289 |
A→C |
14.8% |
N156T (AAC→ACC) |
prpC → |
2‑methylcitrate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 3,925,289 | 0 | A | C | 14.8%
| 312.5
/ 10.5
| 178 | N156T (AAC→ACC) | prpC | 2‑methylcitrate synthase |
| Reads supporting (aligned to +/- strand): ref base A (90/57); new base C (2/29); total (92/86) |
| Fisher's exact test for biased strand distribution p-value = 9.71e-09 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 188 total aligned reads displayed.
ATGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTT > NZ_CP022686/3925150‑3925428
|
aTGCGCACCGGCGTTTCCGCGCTCGGCTGAACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCTCTTAGTTCGATTCTTCTCTACTGGTATCCCTCCAGCCACaa > 4:1054380/1‑140 (MQ=255)
gcgcACCGGCGTTTCCGCGGCCGGCTGCACGCTGCCAGAATAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACaa < 6:374090/138‑1 (MQ=255)
gcgcACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCAACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACg < 8:1119700/140‑1 (MQ=255)
cACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCg > 7:155079/1‑140 (MQ=255)
cACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCg > 3:246735/1‑140 (MQ=255)
ccGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGaa < 3:537982/140‑1 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGa > 5:943412/1‑138 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGGTTCTGGTGCGCGGGATATTGCCGACAACCTGCGGGCGTCACTTAGTTCGATTCGTGTCTACGGGTTTCACTACAGCCCCAACGGCgc > 5:864227/1‑137 (MQ=255)
cGGCGTTTCCGCGCTCGGCTGCACGCGGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTAGATTCTTCTCTACTGGTATCCCGACAGCCACAACGGCgc > 1:38022/1‑137 (MQ=255)
gCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACCACGGCGAAc > 5:13022/1‑138 (MQ=255)
tttCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATc < 3:693835/140‑1 (MQ=255)
tttCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATc < 8:222576/140‑1 (MQ=255)
cgcTCTTCTGCACGCTGAGAGAAAAAGAGTGGCACACTTTTTCTGGTGCGCTGGATATTGCAGAAAAACTGCTGGAGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACCGCCACAACGGCGAACGCATCCAGCCg < 4:700465/140‑1 (MQ=255)
acagcGGCTTCACGCAGCAAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGTGATATTGCCGACAAACTGCTGGCGTCACTTAGATCGATTCAACTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGc < 5:295292/134‑1 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGaaa < 8:353502/140‑1 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGa < 5:579882/138‑1 (MQ=255)
cGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATACCTACAGCCACAACGGCGAACGCATCCAGCCGGa > 2:829696/1‑138 (MQ=255)
aCGCTGCAATAAAAAGTGGGGCACACCGTTTGTGGTGCGGGGTATTTTGCCGACAAACTGCGGGCGTCACTTTGTTCGATTCTTCTCTACTGGTATAACTACACCCACAACGGCGAACGCATCCAGCCGGAAACtgatga < 8:155079/140‑1 (MQ=255)
cggtGCCATAAAAAGAGGGGCACACGGTTTCTGGTGCGCGGTATATTGCCGACAAACTGCTGGCTTCAATTAGTTCTATTCTTATCTACTGGTATCACTACAGCAACAACGGCTAACGCATCCAGCCGTAAACtgatg < 2:577577/135‑1 (MQ=255)
ccAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTTCCGACAAAATGCTGGCGTCACTTAGTTCGATTCTTATCTACTGGTATCTCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATgactgt > 6:295292/1‑135 (MQ=255)
ccAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGACCGCATCCAGCCGGAAACTGATGACGActc > 4:155082/1‑140 (MQ=255)
tgagGGGCACCCCGTTTCGGGTGCGCGGTATATTGCCTAAAAACTGCGGGCGTCACTTAGTTCTTTTCTTCTCTAGTGGTAACACTACAGCCACACCGGCTAACGCATCCAGCCGCAAACTTATGACGACTCTATcggcg < 8:909755/139‑1 (MQ=255)
agagGGGCACACCGTTTCTGGTGCGCGGTATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCTAACGCACCCCGCCGTAAACTGATGACGACTCTATcggcg < 3:844523/140‑1 (MQ=255)
cggggCACCCGTTTTCGGGTGCGCGGTATATGGCCGACAAAATGCTGCCGCCACTTAGTTAGATTCTACTCAACTGGAATCACAACAGCCACAACGGCTACCGCACCCAGCCGGAAACTGATGACGACTCTATCGGCGGt < 8:70916/139‑1 (MQ=255)
agGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCCCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGACCGCCTCCAGCCGGAAACTGATGACGACTCTATcggcg > 6:59792/1‑138 (MQ=255)
agGGGCACACCGTTTCTGGTGAGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCACCCGGAAACTGATGACGACTCTATcggcg > 1:1037222/1‑138 (MQ=255)
gggccccacCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCGGGCGTCACTTCGTTCTATTCTTCTCTACTGGTATCACTACACCCACAACGGCTAACGCATCCAGCCGGAAACTGATGACGACTCTATcggcgg < 2:230904/132‑1 (MQ=255)
ggccacaCGGTTTCTGGTGCGCGGTATATTGCCCACAAACTGCGGGCGTCACTTAGTGCTATTCTTCTCAACTGGTATCACACCCGCCACAACGGCGACCGCACCCAGCCGTAAACTGAGGACGACTCTATCGGCGGt < 5:722097/135‑1 (MQ=255)
ggccacaCCGTTTGTGGGGCGCGGTATATTCCCGAAAAACTGCGGGCGTCACTTAGTTCTATTCTTCTCTACTGGTATCACTACAGCCACACCGGCGAACGCAGCCCGCCGTAAACTGATGACGACTCTATCGGCGGTCa < 4:417809/137‑1 (MQ=255)
gCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACACCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTcc > 6:1093065/1‑137 (MQ=255)
gCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTATACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACt > 7:156279/1‑140 (MQ=255)
aacCGTTGCTGGTGCGCGGTATATTGCTGACAAACTGCGGGGTGCACTTAGTTCGATTCTGCTCTACGGTTATCACTACACCCACAACGGCTAACGCATCCAGCCGTAAACTTATGACGACTCTATCGGCGGTCACtt < 2:1078984/137‑1 (MQ=255)
cttttCGGCTGCGGGGGAAATTCCCGAAAAACTGCTGGCGACACTTAGTTCTATTCTTCTATCCTTCTAGCACACCACCCACACGGGGAAACGAATCCAGCCGCAAACTGATCACGACTCTATCGGCGGTCACTTCCt < 6:388069/136‑1 (MQ=255)
tGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATct > 1:496782/1‑138 (MQ=255)
gcggGGTATATTGCCCAAAAACTGCGGGCGTCACTTATTTCTATTCTTCTCTACTGGTATCACTACCCCCACACCGGCGAACGCATCCCGCCGCAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATctgctg < 1:438317/138‑1 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 7:479260/1‑140 (MQ=255)
gcgcGGGATATTGCCGACAAACTGCTGGCGGCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACCCATCCAGCCGGAAACTGATGACGACACTATCGGCGGGCACTTCCTGCATCtgctgcc > 4:895063/1‑139 (MQ=255)
gcgcGGGATATTGCCGACAAACTCCTGGCGTCACTTAGTTCGATTCTTCTCTCCTGGAATCAATACAGCCAAAACGGCTAACGCATCCACCCGGAAACTCATCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa < 4:107006/140‑1 (MQ=255)
gcgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 2:164154/1‑138 (MQ=255)
gcgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCa > 5:1069121/1‑138 (MQ=255)
gcgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTATCTACTGGTATCACTACAGCCACAACGGCGAACCCATCCAGCCCGAAACAGATGACGACTCTATCGGCGGTCACTTCCTGCATatgcatca > 5:694555/1‑134 (MQ=255)
cgGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACgg > 3:87899/1‑140 (MQ=255)
tGCCTAAAAACTGCTGGCGTAACTTCGTTCTATTCTTCTCTACTGGTATCCCTACAGCCACACCGGCGAACGCATCCAGCCGTAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGaaaa < 2:132642/138‑1 (MQ=255)
tGCCGACAAACTGCTGGCGTAATTTCGTTCGATTTTTCTACACTTGTTACACTACACCCACAACGGCCACCGAACCCAGCCGGAACCTCTTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGc < 4:109430/140‑1 (MQ=255)
tGCCCACAAACGGCGGGCGAAATTTAGTTCTATTCTTCTCACCTGGATTCACTACACCCACCCCGGCCAACGCAGCCCGCCGTAAACTCTTCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGaaaa < 5:445935/138‑1 (MQ=255)
ccGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCGGCATCTGCTGCACGGCGACAAGc > 2:1140587/1‑138 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGACCGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 7:928139/1‑140 (MQ=255)
aCAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCg > 3:1119090/1‑140 (MQ=255)
aCTGCTGGCGTCACTTAGGTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTTCACGGCGTAATGCCGTCGCaaa > 7:81637/1‑140 (MQ=255)
ctgctgGCGTCACTTAGTTCGATTCTTCTCTCCTGGAAGCACTCCAGCCACAACGGCTAACGCAGCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAg < 4:1122514/140‑1 (MQ=255)
tgGCGTCACTTTGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCTGCGGTCACATCCTGCATCTGCTGCACGGCCAAAAGCCGTCGCAAAGCt > 1:1226601/1‑138 (MQ=255)
gCGTCACTTAGTTCGTTTCTTCTATAGTGTTATCACTACAGCCACAAGGGCTACCGCATCCAGCCGGAAACGGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGa < 3:999553/140‑1 (MQ=255)
ctgcagttAGTTCGATCCTTGTCTACTGGTAACACACCCCCCAAAACGCCGACCGCCGCCCGCCTTAACCTTTTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTggg < 1:227535/132‑1 (MQ=255)
gTCACTTCGTTCTATAGTTCTCTACTGTTATCAATCCCGCCACACCGGATAACGCATCCAGCCTGAAAATTATGACGACTCTATCGGCGGTAACTTCCTGCATCTGCTGCACGGCGAATAGCCGTCGCAAAGCTGGGaaa < 3:633940/140‑1 (MQ=255)
aattAGTTCGATTCTTCTCTACTGGTATCAATAACCCCACAACGGTGATCGCATCCAGCCTGAAACTTTTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 7:933262/138‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGTAATCACTACAGCCACACCGGCGAACGCACCCAGCCGTAAACTGAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 4:390362/140‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCCCAACGGCGAACGAACCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 4:775129/140‑1 (MQ=255)
aCTTAGTTCGATTCTTCTCAACTGGAATCACAACCGCCACACCGGCGAACGCATCCAGCCGGAAACTGATCACGACTCTATCGGCTGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAgg < 3:171118/140‑1 (MQ=255)
aCTTAGTTCCTATATTCTCTAATGGTATAACTACAGCCACAACGGCGAACGCATCCAGCCGTAAAAGTATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGaaaa < 2:804159/138‑1 (MQ=255)
ttCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGc > 3:775129/1‑140 (MQ=255)
gATTCTGCACAACTGGCACCACAACAGCACCACCCGGCACCGCATCCAGCGGGAAACTGAGGACGACTATATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCa < 6:474160/138‑1 (MQ=255)
tttcttcTATAGTGTTATCAAACCACCCACACCGGCGAACGCATCCTGCGGTAAACTGAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 1:351760/137‑1 (MQ=255)
atgcttctCTACTGGACTCCCACCACCCACACCGCCGAACGAAGCCCCCCGCAACCTGCTGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 6:144226/135‑1 (MQ=255)
atatttctCACCTGGTATCACAACATCCAACCCGGCGACCGCATCCTCCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAACGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat < 8:363604/136‑1 (MQ=255)
aTTCTTCTCTACTGGTATCACTCCCGCCACAACGGCGAACGCATCCCGCCGTAAACTGAGGACGACTCTCTCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCat < 2:275525/138‑1 (MQ=255)
aTTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCatat > 4:857416/1‑140 (MQ=255)
aTTCTTCGCTTCTGGTAGCACAACAGCACCACCGGCGACCGCATCCAGCCGAAACCTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAGGCTGGGAAAAGGCGATGCat < 6:500134/138‑1 (MQ=255)
ttcttaTCTACTGGTATCAATACTGCCACAAGGGAGAACGCATCCAGCCGGAAACTCAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCata < 5:936749/138‑1 (MQ=255)
catctcTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAtc > 1:1112810/3‑138 (MQ=255)
tctctcCTGGTACCACTACCGCCACCACGGCTAACGCATCCCGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAtctc < 1:420535/138‑1 (MQ=255)
tctcTACTGTTATCAATACAGCCACACCTGCGATCGCATCCCGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAtctc < 1:273832/138‑1 (MQ=255)
tctcTACTGGTAACAAACCAGCCAAACCGGCCAACGCTTCCCGCCGTAAACTGATGCCGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 8:701460/140‑1 (MQ=255)
tctaTACTGTTATCACTCCCGACACAACGGCGAACGAATCCAGCGGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATAtctc < 2:99628/138‑1 (MQ=255)
tctACTGTTATCAATACAGCCACAACGGCCAACGCATCCAGCCGTAAATTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGc < 6:1069129/138‑1 (MQ=255)
tctACTGGTATCACTACACCCACACCGGCGACCGCATCCAGCCGTAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTg < 7:491223/140‑1 (MQ=255)
actACTGGAACCACACCACCCACACCGGCGACCCCCCCCCCCCGAAATATCAGGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTg < 3:409026/139‑1 (MQ=255)
cTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGt > 5:327959/1‑138 (MQ=255)
ggTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGc > 6:727104/1‑138 (MQ=255)
gTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGAATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGt > 8:430256/1‑140 (MQ=255)
cACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAATCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTAc > 1:943802/1‑138 (MQ=255)
cACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATATCGCTGGTGCTGTAc > 2:870900/1‑138 (MQ=255)
cACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATATCGCTGGTGCTGTAc > 2:958198/1‑138 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTgctgtct > 3:201296/1‑134 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACg > 5:147521/1‑138 (MQ=255)
aCTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGcc > 7:514969/1‑140 (MQ=255)
atACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCg < 3:343024/139‑1 (MQ=255)
tgacctaaCGGGGAACGCTCCCCGCCGGATACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCTAAGCTGGGAAAAGGAGATGCATATCTCGCTGGTGCTGTACGCCGAaca < 4:31945/134‑1 (MQ=255)
cgCCACACCGGCGAACGCATCCAGCCTGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAaca < 4:589826/139‑1 (MQ=255)
cgCCACAAGGGCTACCCCATCCCGCCGTAACATGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGaa < 6:944034/137‑1 (MQ=255)
aGCCACAACGGCGAACGCCTCCAGCCGGAAACTGATGACGACTCTATCGGCGGGCCCTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCAAAGCTCGCTGGTGATGTACGCCGAcca > 3:347409/1‑140 (MQ=255)
gCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac > 7:1038655/1‑140 (MQ=255)
cccACACCGGCGAACGCATCCCGCCGGAACCTGAGCACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 7:1092149/139‑1 (MQ=255)
cccACAACGGCTAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac < 4:634075/139‑1 (MQ=255)
cacaACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac > 2:834729/1‑138 (MQ=255)
cacaACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAacac > 1:1166126/1‑138 (MQ=255)
aCGGCGAACGCATCCCGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGt > 2:240822/1‑138 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAACGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGt > 5:1039732/1‑138 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGttt > 3:1203249/1‑140 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGttt > 4:252368/1‑140 (MQ=255)
aCGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGt > 6:1012056/1‑138 (MQ=255)
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ATGCGCACCGGCGTTTCCGCGCTCGGCTGCACGCTGCCAGAAAAAGAGGGGCACACCGTTTCTGGTGCGCGGGATATTGCCGACAAACTGCTGGCGTCACTTAGTTCGATTCTTCTCTACTGGTATCACTACAGCCACAACGGCGAACGCATCCAGCCGGAAACTGATGACGACTCTATCGGCGGTCACTTCCTGCATCTGCTGCACGGCGAAAAGCCGTCGCAAAGCTGGGAAAAGGCGATGCATATCTCGCTGGTGCTGTACGCCGAACACGAGTTT > NZ_CP022686/3925150‑3925428
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
