Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,094 |
G→T |
7.3% |
T254T (ACC→ACA) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,094 | 0 | G | T | 7.3%
| 414.5
/ 2.3
| 177 | T254T (ACC→ACA) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base G (25/134); new base T (16/2); total (41/136) |
| Fisher's exact test for biased strand distribution p-value = 5.21e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 177 total aligned reads displayed.
TCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGC > NZ_CP022686/2048958‑2049232
|
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTa < 6:854437/140‑1 (MQ=255)
ggATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTacga < 2:441690/140‑1 (MQ=255)
gATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGttggga > 3:547872/1‑135 (MQ=255)
gATGTCCAGACGACCATCTTTCAGGCGATCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCCCGGCGCTGTTGTAGCCGTTACGCTCAAGATCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTGttagga > 1:333041/1‑135 (MQ=255)
tggccAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCGGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTacgaacg < 7:20538/137‑1 (MQ=255)
tCCAGCCGACCATATATCAGGCTTTACATTGTCTGCTCACGCAACGCCAGGTTGAAGTCCCCGTTCAGCGCGGCGCTGTTTTAGCCGTTACCCTCATGCGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTTTaccaacgca > 2:240779/1‑138 (MQ=255)
tCCAGACGCCCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑GTTTTGTAagaacgaa > 2:549953/1‑140 (MQ=255)
tCCAGACGACCATCTTTCAGGCGTTCAAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGACGTAACGCTCAAGAGCTTCTGCCACTTCCAGAGTAGCGTGTTTTGTTacatagaa > 5:149793/1‑134 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATcgc < 3:677750/140‑1 (MQ=255)
ccATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATcgc < 6:894490/140‑1 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTTGTTAGAAACAAGATAATagcc > 1:1040754/1‑140 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATcgcc < 6:182174/140‑1 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTGCGCAACTAGATAATAGCCGCAGCaaaaaatt > 4:497819/1‑136 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGTAGGAAAGAAGATAATAGGCGCCTCAAAATAtt > 4:693851/1‑140 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCGGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGTTTAGTAAGAAGATAATAGCCCCCTCAAAATCtt > 4:740993/1‑140 (MQ=255)
tCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCTACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAAATAATAGCCGCCTCaaaaaaata > 6:865143/1‑135 (MQ=255)
cAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCg < 1:417801/140‑1 (MQ=255)
aGTGTCTGCTTACGCAGCGCCTGGTTCATGTCCCCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGc < 4:266458/140‑1 (MQ=255)
tCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTcc < 5:279164/140‑1 (MQ=255)
cTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 1:243870/140‑1 (MQ=255)
cTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCa < 1:193338/140‑1 (MQ=255)
tGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGTGAGAACGAAGATTATAGCCCCAAACAAATATTACGCCTCCac > 4:1101974/1‑139 (MQ=255)
tGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACGTCCAGCGTCGCGG‑GTTGGGTTCGCACGCTGATAAAAGCCGCGACGAAAAAGTCCGCTTcccg > 2:689940/1‑138 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTTTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTTGTACGAACGAAGTTAATCGCCGCATCAAAATCTTCCGCTTCCAgg < 1:1025787/140‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAgg < 3:358879/140‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAgg < 3:946838/140‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAgg < 7:741926/140‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGTGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGaaa < 5:799922/140‑1 (MQ=255)
cAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGGATGAACGAAGATAATAGCCGCATCAAAATCATGCGCTGCAAgggacagta > 4:385026/1‑133 (MQ=255)
aGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTAc < 7:32867/140‑1 (MQ=255)
aGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGATACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTAc < 1:736087/140‑1 (MQ=255)
gcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGTTCGAACGAAGATAATAGCCGGCTCAAAATATTGCGCGGCCACGAGACGGACAAg > 4:796993/1‑140 (MQ=255)
ccTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TATTGGTACGAACGAAGATAATCGCCGCATAAAAAAATTCCGCATCCAGGAAACCTACCAgg > 8:810264/1‑139 (MQ=255)
ccTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTGTTCGAACGAAGAGAATAGCCGCAGCAAAAACTTGCGCGTCAAGGGAACGTACCAgg > 8:877731/1‑139 (MQ=255)
ggTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCt < 1:143234/140‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTGTTAGAACCAAAATAATAGCCGCATCAAAAACATACGCGTCCCGGAAACGTACCCGTGCtt > 3:865904/1‑140 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGGTGGGCCCAAGATAATAGGCGCCGGAAAATCTTCACCTTGCCGGGAAAGGACCAGTGGtt > 2:486276/1‑140 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGAGCTGTTGTAGTGGTTACTCTCAAGTGCTTCTGCCACTTCCAGAGTCGCGT‑TTTGGTTACGAACGAAGATAATCGCCGCATCAAATTCTTCCGCTTCCAGGAAACGTACCAGTGCtt < 6:1033698/140‑1 (MQ=255)
cGTTCTGCGGGGCTCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑GTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:345749/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACTCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:925891/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:1050954/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 8:786338/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 8:284308/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:293346/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 1:988770/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:452925/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:728518/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:617759/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 3:362574/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:402401/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 4:902625/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 5:651628/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTGTTGGAAAGAAGATAATAGCCGCCTCAAAATAATCCGCTTCCAGGAAACGTACCAGTGGGTAGTTTTTAAGc > 6:164116/1‑140 (MQ=255)
cGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACATCCAGAGTCGAGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 7:336808/140‑1 (MQ=255)
cGTGCAGCGCGGCGATGTTGTAGCCGTTACGCTCAAGAGCGTCTGCCACTTCCAGAGTCGAGT‑TTTTGGTACGAACGAAGATAATCGCCTCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGc < 2:804921/140‑1 (MQ=255)
aGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATAcc < 6:1036398/140‑1 (MQ=255)
aGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATAcc < 2:772416/140‑1 (MQ=255)
aGCGCGGCGCGGTTGGAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATAcc < 8:574784/140‑1 (MQ=255)
cgcgGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTGTAACAACGAATCTAATACCCGCATCAAAATAATACACTTGCAGGAAACGTACCACGGCGGAGTGTTTAAGCCTAcccc > 8:1018036/1‑140 (MQ=255)
ggctCTGGTGTAGCCGTTACGCTCAAGAGCTTCTGCACATTCCTGAGTAGCGT‑TTTTGTTACGAAAGAAGATATTCGCCGCATCAAAATCTTCCTCTTCCATGAAACCTACCAGTGATTCGTTTTTACGCATACCCCAGa < 4:95752/140‑1 (MQ=255)
ggcgCTGTTTTAGCCGTTTCGTTCAAGAGCTTCTGCCACTTCCAGATTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATGAAAATCTTCCGCTTCCTGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 5:505148/140‑1 (MQ=255)
ggcgCTGTTGTATCCGTGACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATAGCCGCATCAAAATCTTCCGCTTCCAGTAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:919682/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCTCTTCCAGCGGAGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCTGa < 1:65436/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAAGGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:264022/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCTGTGCTTCGTTTTTACGCATACCCCAGa < 5:99573/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 5:499385/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 2:864399/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:52048/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:881554/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:360319/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:350372/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCAACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCTTACCACAGa < 6:470336/140‑1 (MQ=255)
gcgcTGTTGTAGCCGTTACTCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 1:225826/140‑1 (MQ=255)
gcgcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGAc < 4:188730/140‑1 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 6:701237/140‑1 (MQ=255)
ttgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCa < 7:262335/140‑1 (MQ=255)
tgtATCGGTTACGCTCAAGAGCTTATGCCACTTCCAGAGTCGCGT‑GTTTGGTACGAACGAATATAATCGCCGATTCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCat < 5:672791/140‑2 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 7:481834/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 8:344009/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 2:823648/140‑1 (MQ=255)
gtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGt < 8:467724/140‑1 (MQ=255)
gCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTGGTAAGCACGCAGATAATAGCCGCATGAAAATATTACGGTTCCAGGGAAAGTACCAGTGCGTGGGTTTTTAGCATACCCCCCCCAGGCCAGTAGc > 4:483644/1‑140 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑TTTTTGTTAGGACGAAGATAATAGCCGCATAAAAAACTTCCGCTTCCAGGAAAAGTACCAGGTGTTGGTTTTTTAGGCTAACCCAGACAGTCCAGTAgggcggg > 4:772406/1‑134 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGG‑GTTTGGGTCGCACGAAGCTAAAGGCCCCAACAAAATAATCCGCGTTCAGGGAACGGACCCGTGCTTCGGTTTTAAGCATACACCAGACACTCCCGTAGCTCTgg > 6:252588/1‑140 (MQ=255)
aCGCTCAAGAGCTTCTTCCACTTCCAGAGTCGCGT‑TTTTGGTACGATCGAAGATAATCGCCGAATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGc < 2:525746/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 8:295564/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAgg < 8:441382/140‑1 (MQ=255)
cTGCCACTTCCAGAGTCGCGT‑GTTTTGTTAGAACGAAAATAATAGCCGCATCAAAAAATTACGCGGGCAGGAAACGTACCACTGCTTGGGTTTTTAGCATACCCCACACAGTACAATAGCTCTGGGGGATGTGAggcggg > 6:869500/1‑136 (MQ=255)
caattCCAGAGTCGCGT‑TTTTTGTACGTACGAAGATAATCGCCGCATCAAAAGCTGCCGCTTCCAGGAAACTTACCAGTGCATCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCATGACGGGTAg < 5:424889/137‑1 (MQ=255)
cACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 7:694718/140‑1 (MQ=255)
cACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGACGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCGTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 4:267688/140‑1 (MQ=255)
cACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAAGCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCGCTGGCTGATGTCAGGACGGGTAg < 3:61296/140‑1 (MQ=255)
ccAGAGTCGCGT‑TTTTGGTACGAAGGAAGATAATCGCCGCATCAAAATCTTCGGCTTCCAGTAAACGTAACCGTTCTTCGTTTTTACGCATACCCTAGACAGTACAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCTCg < 5:563648/140‑1 (MQ=255)
ccAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 5:793118/140‑1 (MQ=255)
ccAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 7:890655/140‑1 (MQ=255)
ccAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 1:532973/140‑1 (MQ=255)
ccAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATAAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTGGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACg < 5:177672/140‑1 (MQ=255)
tCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAAGCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGGTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 1:920284/140‑1 (MQ=255)
gcgcgT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 2:468647/139‑1 (MQ=255)
tGGTACTCACGTAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCGCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATgcgc < 2:1050560/140‑1 (MQ=255)
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TCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGT‑TTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGGAAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGC > NZ_CP022686/2048958‑2049232
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
