Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F2 I0 R1
|
117 |
5184.3 |
6857682 |
98.3% |
6741101 |
135.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,110,457 |
T→G |
11.9% |
K12N (AAA→AAC) |
rplM ← |
50S ribosomal protein L13 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,110,457 | 0 | T | G | 11.9%
| 250.6
/ 7.5
| 147 | K12N (AAA→AAC) | rplM | 50S ribosomal protein L13 |
| Reads supporting (aligned to +/- strand): ref base T (53/73); new base G (19/2); total (72/75) |
| Fisher's exact test for biased strand distribution p-value = 2.88e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 150 total aligned reads displayed.
TCAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAAT > NZ_CP022686/2110321‑2110593
|
tCATAACGATGATGTAATCACCGGTAGCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGtt < 1:528436/138‑1 (MQ=255)
cGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGtt < 5:652097/140‑1 (MQ=255)
gatgatGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCCACAACATACCAGTCGCGGTTTAAGGttt > 5:285873/1‑140 (MQ=255)
tgatgTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCt > 3:270243/1‑140 (MQ=255)
tgatgTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCt > 6:48091/1‑140 (MQ=255)
tAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCATGCGACGAGACAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGttt < 6:684242/140‑1 (MQ=255)
tAATCACCGGTATCGACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTGCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGt < 8:104076/138‑1 (MQ=255)
tAATCAACTTTATCTACGTTGGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTATCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGttt < 6:684246/140‑1 (MQ=255)
aTCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACAAACCAGTCGCGTTTTACGGTTTCTGGttt > 8:504056/1‑138 (MQ=255)
tCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTCTGGTTTAGc > 6:192366/1‑140 (MQ=255)
aCCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTATTACGGTTTCTGGTTTAGCTg > 4:782320/1‑140 (MQ=255)
cGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAAAATAACAGTAGCGTATTAAGGGTTAGGGATTTGCTg > 7:645281/1‑138 (MQ=255)
ggTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGt < 1:880902/138‑1 (MQ=255)
tATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACCACATACCAGTCGCGGTTTAAGGTTTCTGGGTTAGCTGtttaa > 3:234557/1‑136 (MQ=255)
tCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGt > 4:275351/1‑140 (MQ=255)
tACGTTCGGAGTGTATTCCGATTAGTTCGTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGTCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGTTTTCTGGTTTAGCTGTAAAAGt < 8:385877/138‑1 (MQ=255)
gctgAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTATGGTTTAGCTGTAAAAGTTTTCa > 2:502262/4‑138 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACACCATACCAGTCGCGTTTTACGGTGTAGGGTTTAGATGTAAAAGGTATCAGTa > 4:7502/1‑140 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCAt < 8:690565/138‑1 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTCTGGGTTAGCGGTAAAAGTTTTAAttt > 6:376207/1‑139 (MQ=255)
gAGTTTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTGTTACCGGTCGCGTCAACAACATACAAGTCTCGTTTTACGGGTTCTGGTTTAGCTGTAAAAGTTTTCAATa > 8:626295/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTa > 1:620537/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTGTCTGGTTTAGCTGTAAAACTattaatta > 8:354548/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTGTTACGGGTTCTGGTTTAGCTGTAAAAATTTTCAATa > 8:290835/1‑138 (MQ=255)
gtgtATTCCGCTTTGTGCTAACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTAAACAACATACAAGTCGCGGTTTACGGTTTATGGGGTAGCTGGTAAAATtttaatttaa > 1:112179/1‑138 (MQ=255)
gtATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCt < 5:790605/140‑1 (MQ=255)
ttCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAc < 5:419207/140‑1 (MQ=255)
tCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTa < 7:785275/138‑1 (MQ=255)
gCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaa > 4:849074/1‑140 (MQ=255)
gCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCCTTTTACGGTTTCTGGTTTATCTGTAAAAGTTTTCATTAATAGCTTACACaa > 5:612853/1‑140 (MQ=255)
tttGTTCTTACCGCGCAGGCGACGAGACAGTTCAGTATCCAGAAGTCCCAGAGTTTTACAGGTCGCGTCAACAACATACCAGTCTCGTTTTACGGTTTCTTGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaa < 7:10597/138‑1 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaata > 4:106294/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGGCAACAACAAACCAGTCGCGGTTTACGGTTGATGGTTTAGCAGTAAAAGTTTTCATTAAAAGCTTACCCaata > 5:147061/1‑140 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACCACATACCAGTCGCGTTATACGGTTTCTTGTTTATGTGTAAAAGTTTTCATTAAAAGCTTACACaataaa > 4:153095/1‑140 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTAAGGGTTCTGGTGTTGGTGTAAAAGTTTTCATTAAAATCTTACCCaata > 2:430834/1‑138 (MQ=255)
tgCTTACCTCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGGTTCAACAACATTCAAGTCGCGTTTTACGGTTTAAGGTTTAGCAGTTAAATGTTTAATTAAAATCTTACACaataaa > 1:234895/1‑138 (MQ=255)
tgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCAt < 2:811604/119‑1 (MQ=255)
tgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTAAt > 1:811604/1‑119 (MQ=255)
tgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGGCAACAACATACCAGTCGCGGTTTACGGTTTGTGGTTTAGCTGTTAAAGTTTTCATTAAAAGCTTACCCaataaa > 1:653051/1‑138 (MQ=255)
gCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAg < 5:674493/140‑1 (MQ=255)
ttACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGtt < 3:853375/140‑1 (MQ=255)
tACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTa < 5:192366/140‑1 (MQ=255)
tACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTa < 4:583834/140‑1 (MQ=255)
aCCGCGCAGGCGACGCGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTAATTAAAAGCTTACCCAATAAATAGTTac > 6:433656/1‑140 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTTAGGGTTCTGGTTTAGCGGTAAAAATTTAAATTAAAATCATACCCCATAAATAGTTaa > 5:413701/1‑139 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa < 3:448637/133‑1 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa > 4:448637/1‑133 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTaa > 4:262519/1‑139 (MQ=255)
ccGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTaca < 3:802443/140‑1 (MQ=255)
ccGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGGCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTa < 2:407125/138‑1 (MQ=255)
ccGCGCAGGCGACGAGCCAGATCAGTAGCCAGACGGCACAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTATACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTa < 1:266136/138‑1 (MQ=255)
cgcgCAGGCGACTCGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTAAGGTTTGTGGTTTAGCTGGTAAAGTTTTCATTAAAAGCTTACCCAATAAAGAGTTaa > 2:531024/1‑137 (MQ=255)
gcAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTGTGGGTTAGGAGTAAAATTTTTCATTAAAAGCTTAACCAAAAAATAGTTACACGtt > 3:518635/1‑140 (MQ=255)
aGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCCACAACATACCAGTCGCGGTTTTCGGGTTATTGGTTTGCTGGAAAATGTTTGATTAAAAGCGTACCCCATAAATATTTAAACCtt > 7:179517/1‑138 (MQ=255)
gacgaGCCAGTTCAGTAGCCAGACGGCCCAGAGGTTTACCGGTCTCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGaa < 5:733663/140‑1 (MQ=255)
tatccAGACGGCGCAGAGTTTTACCGGTCGCGGCAACAACATCCCAGTCGCGTTTTACGGGTTCTGGTTTAGCTGTAAAAGGTTTCCTTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTc < 3:321281/137‑1 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTCTGGGGTAGCTGTAAAAGTTTTAATTAAAAGCTTACCCAATAAATAGTTTCACGTTGGTGCACCCCCAAACGTCttg > 4:833883/1‑139 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTc < 2:762583/138‑1 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGGTTGTGGTTTAGGGGTAAAAGTTTTCATTAAAAGCGTAACCAATAAATAGTTACACGTTTGTTAACACCCAAACCTCTTc > 7:660599/1‑138 (MQ=255)
aGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACAAACCAGTCGCGTTTTTCGGTTTGTGGTTTAGCTGTAAAAATTTTCATTAAAAGCTTTACCAATAAATAGGTAAACGTTGGTGAAAAACCAAACGTCATGAAttg > 6:383572/1‑140 (MQ=255)
aCGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAAttg < 8:330957/138‑1 (MQ=255)
cGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAAttgt < 2:655780/138‑1 (MQ=255)
gagTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGtt < 1:78890/138‑1 (MQ=255)
ttACCGTTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTTAACACCCAAACGTCTTCAATTGGTGAGGTTCACACGa > 4:665888/1‑140 (MQ=255)
tACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGAc > 5:282556/1‑140 (MQ=255)
cGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTGTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACa < 8:660599/138‑1 (MQ=255)
cgcgTCAACAACATACCAGTCGCGTTTTACGGGTTCGTGTTTTGGTGTAAAAAATTTAAATAAAATATTACCCAAAAAAAATTTACACGTATGTTTACACCCAAACCTCTTCAAATTTTGAGTTTAACAAGAaaaactac > 6:444260/1‑136 (MQ=255)
cgcgTCAACAACATACCAGTCGCGGTTTACGGTTTGTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGTACACCCAAACGTCTTAAATTGTTGAGGTTCAAACGACaaatt > 8:494408/1‑136 (MQ=255)
cgcgTCAACAACATACCAGTCGCGGTTTACGGTTTATGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGATGTTCACACGACAAAGTcc > 6:545295/1‑140 (MQ=255)
ctgctacaacaTACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATACTTACACGTTGGTGACCACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCgg < 5:502182/135‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTcc < 8:188421/138‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCgg < 5:510497/140‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCgg < 4:681131/140‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGATTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCgg < 4:221058/140‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTATCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGTGGTTCACACGACAAAGTcc < 1:127826/138‑1 (MQ=255)
cgTCAACAACATACCAGTAGCGTTTTACGGTTTCTGGTTTATCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTcc < 8:182107/138‑1 (MQ=255)
acaacaTACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTTGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGCCAAAGTCCGGCAAAc > 4:374842/1‑140 (MQ=255)
catacccAGTCGCGTTTTACGGTTTCTGGTTTAGCTGAAAAATTTTTCATTAAAAGCTTACCCAATATATCGTAACACGTTGGTGAACACCCAAAGGTCTTAAATTGTTGAGGTTCACACGACAAGGTCCGGCAAAcc < 7:515614/133‑1 (MQ=255)
acaTACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTa < 3:302318/140‑1 (MQ=255)
tACCAGTCGCGGTTTACGGGTTCTGGGTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTACGGCAAACCAAccc > 3:681131/1‑140 (MQ=255)
cccAGACGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTATTATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcc < 8:757491/137‑1 (MQ=255)
aCCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcccc < 6:282556/140‑1 (MQ=255)
aCCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcccc < 3:109411/140‑1 (MQ=255)
aCCAGTCGCGTTTTACGGTTTCTGGTTTAGATGTAAAAGTTTTCATTAAAAGGTTACCCAATAAATAGTTACACGTTGGTGAACACCCTAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcccc < 5:465831/140‑1 (MQ=255)
aCCAGTCGCGTTTTACGGTTTCGGGTTTAGCGGTAAAAGTGTTCATTAAAAGCTTACCCAATAAATTGTTTCAAGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcc < 7:373255/138‑1 (MQ=255)
ccAGTCGCGTTTTAGGGTGTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACAGCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAccc < 8:794347/138‑1 (MQ=255)
ccAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAATTTTTCATTAAAAGCTTACCCAATAAATATTTACAAGTTGGTGAACACCCAAACGTATTAAATTGTTTAGGTTAAACCGACAAAGTCCGGCAAACCTAccc > 7:306909/1‑138 (MQ=255)
ccAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATTGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCt < 6:831478/140‑1 (MQ=255)
ccAGTCGCGTATTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAATTAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCt < 6:762689/140‑1 (MQ=255)
cAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTAAATTGTTGAGGTTCACACGCCAAAGTCCGGCAAACCTAcccc > 8:568473/1‑138 (MQ=255)
gTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 3:262519/140‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:426256/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:286088/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:222489/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 1:428518/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 4:59780/140‑1 (MQ=255)
cgcgTTTTACGGTGTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTGCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 1:890789/138‑1 (MQ=255)
gcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACCTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGa > 7:329536/1‑138 (MQ=255)
gcgGTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTGATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGa > 2:441059/1‑138 (MQ=255)
gTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAATCGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAAt > 2:854569/1‑138 (MQ=255)
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TCAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAAT > NZ_CP022686/2110321‑2110593
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
