Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F35 I0 R1
|
304 |
9232.4 |
10623078 |
98.3% |
10442485 |
135.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,110,457 |
T→G |
10.2% |
K12N (AAA→AAC) |
rplM ← |
50S ribosomal protein L13 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,110,457 | 0 | T | G | 10.2%
| 561.7
/ 13.7
| 294 | K12N (AAA→AAC) | rplM | 50S ribosomal protein L13 |
| Reads supporting (aligned to +/- strand): ref base T (105/150); new base G (36/2); total (141/153) |
| Fisher's exact test for biased strand distribution p-value = 1.20e-10 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 294 total aligned reads displayed.
CAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATA > NZ_CP022686/2110322‑2110594
|
cAGTACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCTCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTa < 1:1135377/140‑1 (MQ=255)
cAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTa < 5:19826/140‑1 (MQ=255)
cAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTa < 1:599744/140‑1 (MQ=255)
gAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACg < 1:967784/140‑1 (MQ=255)
cGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCAGCTATGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCTCGTCAACAACATACCAGTCGCGTTTTACGGtt < 2:107869/140‑1 (MQ=255)
tgatgTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACAAGTCGCGTGTTACGGTTTCt > 7:438620/1‑140 (MQ=255)
atgTAATCACCGCTATCTACGTGCGGAGTGTATACCGCTTTGTGATTACCGCGCAGGCGACGAGCCAGATCAGTAGCCAGACGGCCCAGAGTTTTACCGGTAGCGTCAACAACATAACAGTCGCGTTTTACgctgtat > 4:1296881/1‑132 (MQ=255)
tAATCACCGGTATCTACGTGCTGAGTGTATTCCGCTTTGTGCTTACAGCGCAGTCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTAACGTTCGCGTCAACAACATACCAGTAGCGTATTACCGTTTAT‑GCttt > 7:779366/1‑140 (MQ=255)
aTCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAg < 2:458420/140‑1 (MQ=255)
cACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTAT‑GGTTTat > 3:913616/1‑137 (MQ=255)
cGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGtt > 1:620303/1‑139 (MQ=255)
cGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTa > 2:1235397/1‑140 (MQ=255)
cTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGtt < 5:936603/140‑1 (MQ=255)
tACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGttt < 7:1097967/140‑1 (MQ=255)
tACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGttt > 2:119331/1‑140 (MQ=255)
tACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGttt < 5:291711/140‑1 (MQ=255)
gTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTAG‑GGTTTAGCTGTAAAAGTTTTCa > 2:629062/1‑140 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCCACAACATACCACTCGCGTTTTACGGTTTAT‑GGTTTTGCTGTAAAAGTTTTCAttt > 7:947001/1‑139 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTTCCGTTTCT‑GGGTTATCTGTTATAGTTTTCAttt > 7:266647/1‑139 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCAt < 3:1249582/138‑1 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTa < 1:396939/140‑1 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTa < 5:670277/140‑1 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGGTTTGGTGTAAAAGTTTTCATTa > 5:840668/1‑140 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCATTAGCCAGACGGCCCAGAGTTTTACCTGTCGCGTCAACAACATACCCGTCGCGTTTTAATGTTTAT‑GGTTTATCTTGAAAATTTTAAATTa > 3:504541/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTGT‑GTTTTAGCTGTAAAAGTTTTAATTa > 4:576417/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTa > 3:698244/1‑138 (MQ=255)
gtATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTGGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAg > 4:419349/1‑138 (MQ=255)
tATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCtt < 2:1348306/140‑1 (MQ=255)
ttCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACCTACCAGTCGCGGTTATCGGTTTGG‑TGTTTATCTGGATAATTTTTGAATAAAAGCtt > 3:112427/1‑138 (MQ=255)
ttCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAc < 7:632734/140‑1 (MQ=255)
ttCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAc < 6:46904/140‑1 (MQ=255)
tgccGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAc < 5:375289/138‑1 (MQ=255)
tCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAcc < 1:762879/140‑1 (MQ=255)
ccGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAccc < 7:389707/140‑1 (MQ=255)
cGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTAG‑GGTTTAGCTTTAAAAGTTTTGATAAAAAGCTTAACCa > 5:774531/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACCTACCAGTCGCGTTTTACGGTTTGG‑GGGTTAGCTGGAAAAATTTTGATTAAAAGCTTACACcata > 7:90482/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaata > 2:896449/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaata > 7:472791/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaata > 2:858036/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTAT‑GGTTTAGCTGTAAAAGTTTTAATTAAAAGCTTACCCaaaa > 2:382144/1‑138 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGGTTTACCGGTCGCGGCAACAACATACCAGTCGCGTGTTACGGGTTGT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGGTTACCCaa > 4:909967/1‑138 (MQ=255)
ttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaat < 3:776704/138‑1 (MQ=255)
tgtgCTTCCCGCGCAGGCGCCGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACAGGTCGCGTCAACACCATACCAGTCGCGTTGTTCGGTTTCT‑TGTTTAGCAGTAAAATTTTTAATTTATAGCGTACACaataaa > 6:1049629/1‑140 (MQ=255)
tgtgCTTACGGCGCTGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa < 8:1060894/140‑1 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa < 1:858036/140‑1 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa < 2:1319431/140‑1 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaata < 4:238818/138‑1 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaata > 4:138528/1‑138 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTCT‑GGTTTAGCTGTAAAAGTTTTAATTAAAATCTTAACCaataaa > 6:954902/1‑140 (MQ=255)
tgggCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa < 8:1244364/137‑1 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATTCCAGTCGCGGTTTACGGTTTGG‑TGGTTAGCTGTAAAAGGTTTTAGTTAAAGAGTAACCAATAAATAGTTac > 5:1205852/1‑140 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTAGCGTTTTTCTGTTTGT‑GGTTTTGCTGTAAATGATTTTATTAAAAGATTAACCAATAAAAAGTTac > 7:343463/1‑140 (MQ=255)
aCCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGACGCCTTTTACGGTTTAT‑GGTTTAGCGGTAAAACTTTTCATTAAAAGCTAACCCCATAAAAAGTTaa > 6:182020/1‑139 (MQ=255)
ccGCGCAGGCGACGAGCCAGTTCAGTAGCCAGTCGGCACAGAGTTTTACCGGTCGCGTCAACAACATACCAGTAGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTaca < 2:966510/140‑1 (MQ=255)
ccGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTaca < 1:914857/140‑1 (MQ=255)
ccGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTaca < 5:1037004/140‑1 (MQ=255)
agcgcAGGCGTCGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGTACTAGTCGACAACAAACGAGTCGCGGTTTTTGGATTGT‑TGTTTAGGTGAATAAGTTTTCATTAAAACCATAGACAAAAAAAAGTTac > 4:309368/2‑138 (MQ=255)
gcAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAAAATAACAGTCGCGGTTTTCGGGGTCT‑GTGTTTGCAGTAAAAGTTTTAATTAAAAGCTTTCCACATAAATTGTTTCCCGtt > 8:692957/1‑140 (MQ=255)
gCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTCT‑GGGTTAGCGGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGGTgggg > 8:288134/1‑138 (MQ=255)
catttCATTAGCCAGACGGGCCAGAGTTTTACCGGTAGCGTCTACAACATACCAGTCGCGTTTTAGGTTTTCT‑GGTGTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCTTTAAATAGTTACTCGTTGGTGAACAccc < 3:1068084/135‑1 (MQ=255)
cAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACAccc < 4:339461/138‑1 (MQ=255)
aGTTCATTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGGCAACAACATACCAGTCGCGTGTTTCGGTTTCT‑GGTTTATCTGGAAAAGTGTTACTTAAAAGCGTACCCAAAAAATAATTAAACGTAGGTGAACAACCaaa > 6:1180832/1‑140 (MQ=255)
cAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTc < 1:354634/140‑1 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATAACAGTCGCGTTTTAAGGTTTCG‑GGTTTACCTGTTAAAGATTTAAATAAAATCTTAACAAAATAATAGTTACACGTTTGAGAAAACCCcaaactataa > 8:539420/1‑133 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCTCGTCAACAACATTCCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCATTATATAGTTACACGTTGGTGAACTCCCAAACGTCTTCaa < 2:304148/140‑1 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTAAGGGTTAT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTAAACGTTGGTGAACACCCAAAAGTcgtg > 4:677398/1‑135 (MQ=255)
aGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTGG‑GGGTTATCTGTAAAATTTTTGATTAAAATCATAACCAATAAATATTTTAAAGTTGGTGCACCACCAAACGTCttacattt > 2:918610/1‑134 (MQ=255)
gCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGATTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTTTTTAACACCCAAACGTCTTCAATTGTTGAg < 2:259482/140‑1 (MQ=255)
gCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTAAGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCATACCCAATAAATAGTTACAAGTTGGTGAACACCCAAACGTGATCAATTGTTTAg > 2:533243/1‑140 (MQ=255)
gagTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTca < 7:989730/140‑1 (MQ=255)
ccGGTCGCGTCAACAACATACCAGTCGCGGTTTTCGGTTTGTGGGTTTTCGTGT‑AAATTTTTAATTAAAAACTTAACCAAAAAAAAATTAAACATTGGTGAACACCCCAACGTCTTCAAATGTTGAGGTTAACACGAc > 3:16921/1‑138 (MQ=255)
gTCGCGTCAACAACATACCAGTCGCGTTTTTCGGGTTCT‑GGTTTATCAGTAAAAATTTTAAATAAAAACGTAACCAAAAAATAGTTAAACCGTGGTGAACACCCAAACGTCTTCAATTGTTGATGTTACCAACACAAAGt > 5:588224/1‑140 (MQ=255)
gTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAATTTTTGATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACCCCCAAACGTCTTAAATTTTTGAGGTTAACACGACAAAGt > 2:764213/1‑140 (MQ=255)
gcgTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTAACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCg < 5:1158465/140‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTATTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCgg < 8:947001/140‑1 (MQ=255)
cgTCAACAACAAACCAGTCGCGGTTTACGGTTTCT‑GGTTTATCGGTAAAATTTTTCATTAAAAGCTTTCCCAATAAATAGTTTCACGTTTGTGAGCACCCAAACGGCTTAAATTGTTGAGGTTCACACGACAAAGTCCgg > 6:695468/1‑140 (MQ=255)
gTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGc < 1:1061983/140‑1 (MQ=255)
acaTACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAAcc < 4:460253/138‑1 (MQ=255)
tACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAccc < 1:476521/140‑1 (MQ=255)
ccAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAg > 3:587332/1‑67 (MQ=255)
ccAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAg < 4:587332/67‑1 (MQ=255)
ccAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCt < 2:1370885/140‑1 (MQ=255)
ccAGTCGAGTTTTACGGTTTCT‑TGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTATTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcac < 4:1128026/138‑3 (MQ=255)
tCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGa > 8:879584/1‑140 (MQ=255)
ggcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 1:209783/139‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTATCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 3:356340/138‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTTTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 8:330502/140‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTTCCCCTTCGaa < 8:438620/140‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 3:976116/138‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 4:733310/138‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 4:786487/138‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 3:244487/138‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 5:476051/140‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 8:612897/140‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 6:1249393/140‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 7:1060463/140‑1 (MQ=255)
cgcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGGCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg > 4:545762/1‑138 (MQ=255)
cgcgTTTTACGGGTTCT‑GGTTTAGCTGTAAAAGTTTTCATTATAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 6:616066/140‑1 (MQ=255)
gcgTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGa > 4:960184/1‑138 (MQ=255)
ggTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTGTTCAATTGTTGAGGTTCACACGACACAGTCCGGCAAACCTACCCCTTCGAATa < 7:124628/139‑1 (MQ=255)
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CAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCT‑GGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACGTTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATA > NZ_CP022686/2110322‑2110594
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
