Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,110,457 |
T→G |
8.8% |
K12N (AAA→AAC) |
rplM ← |
50S ribosomal protein L13 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,110,457 | 0 | T | G | 8.8%
| 411.0
/ 5.3
| 216 | K12N (AAA→AAC) | rplM | 50S ribosomal protein L13 |
| Reads supporting (aligned to +/- strand): ref base T (83/107); new base G (23/2); total (107/109) |
| Fisher's exact test for biased strand distribution p-value = 2.57e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 224 total aligned reads displayed.
TTCAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATA > NZ_CP022686/2110320‑2110594
|
cAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGttt < 5:128987/138‑1 (MQ=255)
cGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGtt < 7:433890/140‑1 (MQ=255)
atgTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTCt > 3:970125/1‑138 (MQ=255)
tAATCACCTGTATCTACGTGCGGAGTGTATGCCGCGTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGACAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATAACAGTCGCGTTTTACGGTTTCTGGt < 2:780096/138‑1 (MQ=255)
tAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGt < 1:491359/138‑1 (MQ=255)
cGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTg > 3:420895/1‑138 (MQ=255)
gTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTCGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCCACAACATACCAGTCGCGTTTTACGGTTTATGGTTTAGCTGtt > 2:514853/1‑137 (MQ=255)
gTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTa > 4:356282/1‑138 (MQ=255)
gTATATACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCTCAGTCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCTGTCGCGTCAACACCAAACCAGTCGAGTTTTAAGGTTTGTGGTTTAGCtttt > 4:38276/1‑135 (MQ=255)
cTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAg < 5:707789/138‑1 (MQ=255)
tACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGCCGAGCCAGTTCAGTAGCCAGCCGGCCCAGAGTTTTACCGGTCGCGTCAACAACATCCCAGTCGCGGGTTAGGGTTTCTGGGTTAGCTGTAAAAGt > 4:87044/1‑138 (MQ=255)
gTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTAGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGtttt > 6:967122/1‑138 (MQ=255)
gTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATAACAGGCGCGTTGTACGGGTTGGTGTTTAGCTGTAAAAGgttt > 4:368196/1‑138 (MQ=255)
gCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTTCGGTTTGTTGTTTAGCTGTAAAAGttttga > 5:115235/1‑136 (MQ=255)
gCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTAGGGTTTAGCTGGAAAAGTTTTCa > 6:183473/1‑138 (MQ=255)
cGGAGTGTATTCGGCTTTGTGCTTACCGCTCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTa < 7:938716/140‑1 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTGTGGTTTAGCTGGAAAAGTTTTAAttt > 7:9292/1‑139 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCAt < 6:468609/138‑1 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGCCCCAGAGTTTTACCGGTCGCGTAAACAACATACCAGTCGCGTTTTAAGCGTTCTAGGTTAGCTGTAAAAGTTTTAATTa > 7:658042/1‑140 (MQ=255)
cGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGGAGCCAGACGGCGCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCAt < 3:937895/138‑1 (MQ=255)
cGGAGTGTATGCCGCTTTGTGCTTACCGCTCAGGCGACGAGCCAGTTCAGTAGCCCGACGGCCCAGAGTTTTACCGGTCGCGGCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTGTAGCTGTAAAAGTTTTCATTa < 7:219551/140‑1 (MQ=255)
cGGAGTGAATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTAACGGTTATGGTTTATGTGTAAAATATTTAATTa > 7:47928/1‑140 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCACCAACATACCAGTCGCGTTTTACGGGTTCAGGTTTAGGTGTAAAAGTTTTCATTa > 4:668818/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACCTACCAGTCGCGTTTTACGGTGTCTGGTTTTGCTGTAAAAGTTTTCATTa > 6:343658/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTTCGGTATCTGGTGTAGCTGGAAAATTTTTCATTa > 6:13332/1‑138 (MQ=255)
gAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTAAGGGTTCTGGTTTTGGTGTAAAAGTTTTAATTa > 5:530564/1‑138 (MQ=255)
gtATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATAACAGTCGCGTGTTAAGGTTTTTGGTTTAGCTGTATAAGTTTTCATTAAAAg > 1:310388/1‑138 (MQ=255)
tATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCtt < 7:111794/140‑1 (MQ=255)
ttCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGCCGGCCCAGAGTTTTTCCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTGTCTGGTTTAGCTGTAAAAGGTTTCATTAAAAGCTTAc > 8:767579/1‑140 (MQ=255)
gCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCGTTCCCaa > 8:739937/1‑140 (MQ=255)
tttGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCTACAAAATACAAGTCGCGTTTTTAGGTTACTGGTTTATCTGTAAAAGTTTTAATAAAAAGATTTGCCaa > 6:925875/1‑138 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACCACATACCAGTCGCGTGTTACGGGTTCTGGGTTAGGTGGAAAAGTTTTCATTAAAAGCTTACCCaata > 4:143857/1‑138 (MQ=255)
tgtgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGACAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTCGGGGTTCTGGTTGTGCTTTAAAAATTTTCATGATAATCTTACCCaaaa > 2:429256/1‑136 (MQ=255)
tgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGCCGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTGTAGCGGTAAAAGTTTTCATTTAAAGATTAGCCaataaa > 2:685297/1‑138 (MQ=255)
tgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCaataaa > 6:245712/1‑138 (MQ=255)
tgCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGGTTATGGTTTTTCTGTAAAAGTTTTCAATAAAAGCGTACACaataaa > 2:91153/1‑138 (MQ=255)
tACCGCGCAGGCGACGATCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAAGAACATAGCAGTCGCGTTTTACTGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAATAGCTTACCCAATTAATAGt < 6:821241/138‑1 (MQ=255)
tACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTAGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGt < 1:66739/138‑1 (MQ=255)
cctcccAGGCGACGAGCCCTTTCAGTACCCAGACGGCCCAGAGTTTTACCGGGCGCGTCAACAACAAACCAGTCGCGTGTTACGGGTTCTGGGTTAGCCGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTaca < 8:716953/135‑1 (MQ=255)
cgcgCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGttt < 3:549301/94‑1 (MQ=255)
cgcgCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAAAAACAAACCAGTCGCGGTTTAAGGTTTCTTGTTTTGGTGTAAAAGTTTAAATTAAAAACTTAACCAATAAATAATTaa > 3:18855/1‑137 (MQ=255)
gCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTgg < 1:1034717/138‑1 (MQ=255)
cgacgaGCCAGTTCAGTAGCCAGCCGGCCCAGAGTTTTACAGGTCGAGTCAACAACATACCACTAGAGTTTTACGGTTTCTGGTTTAGCTGTAAAATTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGt < 4:573660/138‑1 (MQ=255)
gacgaGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCTGTCGCGTCAACAACATACCAGTCGCTTTTGACGGGTTCTTGTTTAGCTGTAAAAGTTTTCATTAAAAGATTACCAAATATATATTTACACG‑TTGGTGaa < 7:868001/140‑1 (MQ=255)
gacgaGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTg < 3:966072/138‑1 (MQ=255)
gacgaGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTg < 5:491838/138‑1 (MQ=255)
gacgaGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGaa < 7:139527/140‑1 (MQ=255)
gTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCaa < 4:292445/138‑1 (MQ=255)
ttCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACC‑TTGGTGTACCCCCaaa > 6:790482/1‑138 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAATCGTCt < 6:605757/138‑1 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCt < 2:709875/138‑1 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCt < 1:653955/138‑1 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTc < 8:274947/140‑1 (MQ=255)
tAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGGTTCTGGTTTAGGTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGGGAACACCCACACGGCTTc > 7:377777/1‑140 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTTCGGTTTCTGGTTTTTATGTAAAATTTTTCATTAAAAACTTACCCAATAAATAGTTACCCG‑TTGGTGAACACCCAAACGGCATCaa > 8:339783/1‑140 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTc < 3:591492/138‑1 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCaa < 7:879932/140‑1 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTAAGGTTTCTGGTTTAGCTGTAAAAGTTTTAATTAAAATCTTACCCAATAAATAATTACACG‑TTGGTGAACACCCAAAAGTCATc > 5:977929/1‑138 (MQ=255)
gCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATAACCGTCGCGGGTTAGGGTTTATGGTTTAGCGGTAAAATTTTTCATTAAAATCTTGACCAATAAATAGGTTCACG‑TTGGTGAAAACCCAAACGTCttg > 5:634702/1‑137 (MQ=255)
cAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTAGCGTTTTAAGGTTTCTGGTTTAGCTGTTAAATTTTTAATTTAAAGCTTAACCAATAAATATTTAAACG‑TTGGTGAACACCCAAACGTCTTCaa > 2:749429/1‑138 (MQ=255)
aCGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTATGGTTTAGCTGTAAAAGTTTTCAGTAAAAGCTTACCCAATAAATAGTTACAAG‑TTGGTGCACACCCAAACGTCTTCAAttt > 4:918989/1‑137 (MQ=255)
aCGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTAAGGTTTCTGGTTTATCTGTAAAAGTTTTAATTAAAAGATTACCCAATAAATAGTTACACG‑TTGGTGAAAAACCAAACGTATTCAAttt > 1:772032/1‑137 (MQ=255)
aCGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGGTTTACGGTTTAGGGTTTAGCAGTAAAAGTATTCATTAAAAGCTTACCCAATAAATAGTTAAACG‑TTGGTGAAAAGCCCAACCTCTTCAAttg > 6:648888/1‑138 (MQ=255)
ccAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTTAAAGTTTTAATTAAAAGCTTACCCAATAAAAAGTTACACGTTTGGTAACCACCC‑AACGTCATCAATTTTTGAg > 6:653958/1‑138 (MQ=255)
ccAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTATGGTTTAGCGGTAAAAGTTTTCATTAAAAGCTTCCCCAATAAATAGTTAAAAG‑TTGGTGAAAACCCAAACGTCTTCAATTGTTGAg > 6:391622/1‑138 (MQ=255)
ttACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCacac < 5:865087/138‑1 (MQ=255)
ccGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATATTTACACG‑TTGGTGAACACCCAAACGTGTTCAATTGTTGAGGTTGACACGAc > 4:841702/1‑138 (MQ=255)
gTCGCGTCAACAACATACCAGTCGCGTTTTACCGTTTCTGGTTTTAGAGTTAAACTTTTCAATTAACGCTTACCCAATTAATAGTTACCCG‑TTGGTGTACACCCACACGACTTCAATTGTAGAGGTTCACACCACAAAGt > 8:657847/1‑140 (MQ=255)
cgcgTCAACAACATACCAGTCGCGTTTTACGGTTTAGGGTTTAGCTTTAAAAGGTTTCATTAAAAGCTTACCCAATAAATAGATACACG‑TTGGTGAACACCCAAACGACTTCAATTGTTGAGGTTAACCCCACAAACTcc > 8:120205/1‑140 (MQ=255)
cgcgTCAACAACATACCAGTCGCGGTTTAAGGGTTCTGGTTTAGCAGTAAAATTTTTGATTAAAAGCTTACCCAATAAATAGTTAAACG‑TTTGTGAAAACCCAAAAGTCGTCAATTGTTGAGGTTCAACCGCCAAAGt > 6:286489/1‑138 (MQ=255)
cggcaacaaCATACCAGCCGCGTTTTACGGTTGCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCgg < 8:3920/137‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTGTGGTTTTGCTGTAAAATTTTTCATTAAAAGCTTAACCAATAAATAGTTACACG‑TTTGTGAACACCCAAACGTCTTAAATTGTTGAGGTTCACACGACAAAGTcc > 4:513903/1‑138 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATATTTACACG‑TTTGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTcc < 3:61783/138‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTcc < 6:514557/138‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTcc < 4:970125/138‑1 (MQ=255)
cgTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTcc < 5:364163/138‑1 (MQ=255)
gTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCg < 2:474777/138‑1 (MQ=255)
aCCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcc < 6:441607/138‑1 (MQ=255)
aCCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACACAATAAATAGTTACACC‑TTGGTGAACACCGAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTAcc < 3:760495/138‑1 (MQ=255)
ccAGTCGCGTTTTACGGTTTCTGGTTTAGCGGTAAAAGTTTTCATTTAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCt < 7:731025/140‑1 (MQ=255)
gTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTTGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCtt > 2:376080/1‑138 (MQ=255)
gcgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTGCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAAAACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGa < 8:186256/139‑1 (MQ=255)
cgcgTTTTACGGTTTCTTGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGGGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:639563/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGTTTTAGCTGTAAAAGTTTTCTTTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 5:289908/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTTAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACACAAAGGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGaa < 7:913715/140‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATCGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:197041/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTTAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 1:175929/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:252987/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 4:778094/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:586782/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 1:442180/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTAACCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 4:319023/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTAATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGATCACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 5:183473/138‑1 (MQ=255)
cgcgTTTTACGGTTTCTGGATTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 3:852990/138‑1 (MQ=255)
cgcgTTTTACGGTTTATGGTATAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 2:1019328/138‑1 (MQ=255)
gcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCtt > 2:961099/1‑48 (MQ=255)
gcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg > 3:239144/1‑137 (MQ=255)
gcgTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCg < 4:239144/137‑1 (MQ=255)
gcgTTTTACGGGTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACAAG‑TTGGTGAACCCCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCGTCGa > 4:420351/1‑138 (MQ=255)
ttttACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATa < 5:967122/138‑1 (MQ=255)
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TTCAGAACGATGATGTAATCACCGGTATCTACGTGCGGAGTGTATTCCGCTTTGTGCTTACCGCGCAGGCGACGAGCCAGTTCAGTAGCCAGACGGCCCAGAGTTTTACCGGTCGCGTCAACAACATACCAGTCGCGTTTTACGGTTTCTGGTTTAGCTGTAAAAGTTTTCATTAAAAGCTTACCCAATAAATAGTTACACG‑TTGGTGAACACCCAAACGTCTTCAATTGTTGAGGTTCACACGACAAAGTCCGGCAAACCTACCCCTTCGAATA > NZ_CP022686/2110320‑2110594
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
