Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F13 I0 R1
|
230 |
5035.0 |
9125430 |
98.4% |
8979423 |
135.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
2,049,094 |
G→T |
12.5% |
T254T (ACC→ACA) |
deaD ← |
ATP‑dependent RNA helicase DeaD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 2,049,094 | 0 | G | T | 12.5%
| 431.2
/ 14.5
| 185 | T254T (ACC→ACA) | deaD | ATP‑dependent RNA helicase DeaD |
| Reads supporting (aligned to +/- strand): ref base G (13/144); new base T (25/3); total (38/147) |
| Fisher's exact test for biased strand distribution p-value = 2.46e-18 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 190 total aligned reads displayed.
ATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCA > NZ_CP022686/2048957‑2049233
|
aTCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGt < 3:480592/140‑1 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTa < 2:419336/140‑1 (MQ=255)
tCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTa < 3:881076/140‑1 (MQ=255)
gATGGCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTacg < 7:770410/138‑1 (MQ=255)
tGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTacgaacg < 3:213934/140‑1 (MQ=255)
acgacCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTTGTTCGAAAGAAGCTaa > 5:662293/1‑140 (MQ=255)
cATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGGAGGAACCAATATAATagcc > 3:108991/1‑140 (MQ=255)
acTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGGGAGAACGAAaataataacc > 7:792241/2‑134 (MQ=255)
cAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTTGTTCGGACGCAGATAATagccgccggaa > 5:756941/1‑135 (MQ=255)
gTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGAACGAAGATAATATCCGCCACaaaaaaa > 3:599167/1‑137 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCCCCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGGTCGCACGAAGGTAATGGCCGCCTCaacaacgg > 6:203359/1‑134 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTTGTTCGGAAGAAGATAAACGCCGCGACAAAATCtt > 6:953050/1‑140 (MQ=255)
ttCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGGTTTGGTTCGAACGAAGATAATAGCCGCATCaaaaaatt > 6:501972/1‑136 (MQ=255)
tCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTGTTTTGTAAGCACGGAGATCATCGCCCCAAGAAAAtaatg > 3:636712/1‑136 (MQ=255)
gccAGTGTCTGCTCACGCAGCGCCTGTTTCAGGGCACCGATCAGCGCTGCGCTGTTGTATCCGTTCCGCTCCAGAGCTGCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACTAAGATAATCGCCGCATCAAAATCt < 8:64782/137‑1 (MQ=255)
cAGTGGGTGCTCACGCAGCGCCTGGTTCATGGCACCGTGCAGCGCGGCGCTGTTGTAGCAGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTc < 8:297272/138‑1 (MQ=255)
gtCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGCGGGTTTTTGT‑CGAACGAAAATAAACGCCGCCTCAAAATGTTCCGcgtg > 3:123953/1‑137 (MQ=255)
tGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGTAGGCACGAAGATAATAGCCGCATCAAAATATTACGCGTCCAg > 2:813179/1‑140 (MQ=255)
tGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAg < 1:61806/140‑1 (MQ=255)
gCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCAGCAAAATCTTCCGCTTCCAgg < 5:912596/140‑1 (MQ=255)
cTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGTTCCAACGAAGATAAATGGCGGATCAAAATATAACGCGTCCAggg > 1:861539/1‑139 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑a < 8:1035240/138‑1 (MQ=255)
cACGCAGCGCCTGGTTCATGTCACCGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCTATAGCTTCTCCCACTTCCAGAGTCGA‑GTTTTTGGTACGAACGAAGATAATCGCCGCAGCAAAATCTTCCGCTTCCAGG‑aaa < 5:410022/140‑1 (MQ=255)
aaCGCAGAGCCTGGTTCATGTCACAGTTCAGAGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑aaa < 4:1003907/139‑1 (MQ=255)
cAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGGACGGACGAAGATAATAGCCCCATCAAAATCTTACGCGTACAGG‑CAAcc > 8:69105/1‑137 (MQ=255)
cgcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCa < 2:559129/140‑1 (MQ=255)
gcCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTGTTTGTAGCCACAAAAATAATACCCCCATAAAAATACTCCGCATCCAAG‑TCACGGACCaa > 6:857786/1‑139 (MQ=255)
ggTTCATGGCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCt < 4:457547/140‑1 (MQ=255)
gTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGAACGAATATAATAGCCGCATCAAAATATTAAGCTTACAGG‑AAACGTGCCAGTGGtt > 3:742566/1‑140 (MQ=255)
ggTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 7:238232/137‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTCGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:167011/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTTCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:849290/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTTGTACGAACGAAGCTAAACGCCGCCTCCAAAACTTCAGCATCCAGG‑AACCGTACCACGGCGTCGGTTTTACGc > 6:554137/1‑140 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 7:421671/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 6:1018135/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:3836/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 5:850588/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:77198/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 1:939630/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:1040284/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:1171387/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 3:777370/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:175159/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:214919/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 2:36281/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 5:45137/140‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGGCGC‑GTTTTTGGTACGAACGAAGATTATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:335588/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACATCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 7:660687/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTGCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCAGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:513203/138‑1 (MQ=255)
cGTTCAGCGCGGCGCTGTTGTAGCCGTGACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 5:249639/140‑1 (MQ=255)
cGTTCAGCGCGGCGATGTTGTAGCAGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCTCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 7:726507/138‑1 (MQ=255)
cGTGCATCGCGGCGCTGTTGTAGCCGTTACTCTCAAGAGCTTCTGCCACTTACAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:886508/138‑1 (MQ=255)
cGTGCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGc < 6:163370/140‑1 (MQ=255)
cGTGCAGCGCGGCGCTGTTGTAGCCGGTACGCTCACGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTAc < 8:546424/138‑1 (MQ=255)
gcAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATa < 4:352411/139‑1 (MQ=255)
aGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATAcc < 4:701812/140‑1 (MQ=255)
ggttcTGTTGTAGCCGTTACGCTCAATAGCATCTGCCTCTTCAAGAGTCTG‑GTGTTTTGTAAGAACGAATATAATAGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGAGCTTCTTTTTAACGCATACCCCa < 7:157725/134‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCTCTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:877612/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCTCCTCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:113521/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCTCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:308534/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 7:404510/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 8:239411/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCa < 8:41291/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 4:729458/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:1099485/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 1:1160229/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 3:734768/140‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGAATCAAAATCTTCCGCTTCCAGG‑AAACGTTCCAGTGCTTCGTTTTTACGCTTACCCCa < 7:376653/138‑1 (MQ=255)
ggcgCTGTTGTAGCCGTTACGCTCAAGAGCTTCGGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGT‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGa < 6:768538/140‑1 (MQ=255)
cgcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGAACGAAGATAATAGCCGCATCCAAATCTTGCGCGTCCAGG‑AAACCTACCCGTGCTTGGTTTTTAGGCCTACCCCAGAcc > 6:410470/1‑139 (MQ=255)
gcTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAg < 1:850228/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 1:495876/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 3:27269/140‑1 (MQ=255)
tgtAGCCGTTACGCTCAAGAGCTTATGCCACTTCAAGAGTCGC‑TTTTTTGGTACGAACGAAGATAATGGTAGCATCAAAATCTTCCGCTTCCTGG‑ATACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAg < 1:200101/140‑1 (MQ=255)
gCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGTTAGAACGAAGATAATATCCGCATCAAAATAATGCGCGTCCCGG‑AAAAGGACCAGTGCTTCGTTTTTTCGCCTAACCCAGCCAGTCCAGTAgg > 4:555170/1‑139 (MQ=255)
gTTACGCTCAAGAGCTTCTGCCACTTCCAGGGTCGC‑GGTTTTGGTACGAACGAAGATAATCGCCGCATAAAAATCTTCCGCGTCCAGG‑CAACGTACCAGTGCTTCGTTTTTAAGCATACCCCAGACAGTCCAGTAGcggt > 2:573646/1‑137 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTTGTTCGAACGAAGATAATAGCCGCCTCAAAATATTACGCGGCCCGG‑TAACGGTCCAGGGCTTAGTTTTTTGGCATACCCCAGACAGTCCAGGAGGTCTgg > 4:125433/1‑140 (MQ=255)
tACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GGTTTTGGTGCGAACGAAGATAATAGCCGCCTCAAAATCTTGCGCATCCAGGCAAACG‑ACCAGTGGGTCGGTTTTACGCAAACCCCAGACCGTCCCGGAGCTCggg > 2:672105/1‑140 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 1:829711/140‑1 (MQ=255)
cGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTACGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCt < 4:283961/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 4:228936/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 5:186317/140‑1 (MQ=255)
agagCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTc < 2:1111699/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAgg < 3:1007652/140‑1 (MQ=255)
gCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAgg < 5:1110289/140‑1 (MQ=255)
tCTGCCACTTCCAGAGTCGC‑GTTTTTTGTTCGAACCAAGATAAAAGCCGCCGCAAAATAAACCCCGTCCACG‑AAACATACCAGTGCTTGGTTTTTTAGCAAACCCCAGCCCAAACAGGTGCTCTGGCGGGTGTGAGGACg > 6:709000/1‑140 (MQ=255)
cTGCCACTTCCAGAGTCGC‑GTTTTTTGTAAGAAACAAAATAAAACCCCCCTCAAAATATTCCCCTTCCAGG‑AAAAGTAAAAGTGCTTAGTTTTTAATCAAAACCCACCCAGTCCAGGAGCTCTGTCGGATGGAAGGagcg > 2:262903/1‑137 (MQ=255)
cTGCCACTTCCAGAGTCGC‑GGTTTTTGGACGAACGCAGATAATCGCCGCATCAAAAAATTCCGCGGCCACG‑AAAACTACCACTGCTTAGGGTTTAAGCAAACCCCCCACAGTCCAGTATCTCTGGCTGAGGTCAGGACgg > 4:875030/1‑140 (MQ=255)
cACTTCCATAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 3:455187/140‑1 (MQ=255)
cACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 4:1088603/140‑1 (MQ=255)
cACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 2:1038150/140‑1 (MQ=255)
cACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAg < 6:662293/140‑1 (MQ=255)
aCTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCCGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGt < 1:159885/140‑1 (MQ=255)
gTCGC‑TTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACTTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTg < 8:854892/138‑1 (MQ=255)
tCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 6:179227/140‑1 (MQ=255)
tCGC‑GGTTTTGGTACGAACGAAGATAATCGCCGCATCAACATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTGTTTACGCAGACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGAc < 4:783671/140‑1 (MQ=255)
c‑gTTTTTGGTACGAACGAAGATAATCGCCGCATCAATATCTTCCTCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTTATGTCAGGACGGGTAGTCACGCTGGACt < 7:597026/138‑1 (MQ=255)
gTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGaa < 6:1071209/140‑1 (MQ=255)
ggTACGAACTAATATAATCGCCTCAGCAAAATCTTTAGCTTCCAGG‑AAACGTACCAGGGCTTCGTTTTTACGCATACACCCGACAGTACTGTAGCTCTGGCTGATGTCAGGAAGGGTAGTCACGCTGGACTGTATGCGCa < 5:353416/140‑1 (MQ=255)
ggTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCa < 3:196516/140‑1 (MQ=255)
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ATCAGGATGTCCAGACGACCATCTTTCAGGCGTTCCAGTGTCTGCTCACGCAGCGCCTGGTTCATGTCACCGTTCAGCGCGGCGCTGTTGTAGCCGTTACGCTCAAGAGCTTCTGCCACTTCCAGAGTCGC‑GTTTTTGGTACGAACGAAGATAATCGCCGCATCAAAATCTTCCGCTTCCAGG‑AAACGTACCAGTGCTTCGTTTTTACGCATACCCCAGACAGTCCAGTAGCTCTGGCTGATGTCAGGACGGGTAGTCACGCTGGACTGAATGCGCA > NZ_CP022686/2048957‑2049233
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
