Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F2 I0 R1
|
193 |
6708.0 |
8620653 |
98.5% |
8491343 |
136.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,372 |
T→G |
15.3% |
S37R (AGC→CGC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,372 | 0 | T | G | 15.3%
| 339.4
/ 12.0
| 175 | S37R (AGC→CGC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (64/76); new base G (29/3); total (96/79) |
| Fisher's exact test for biased strand distribution p-value = 2.45e-06 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 181 total aligned reads displayed.
TCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGTTCAAACAT > NZ_CP022686/4368233‑4368507
|
tCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCt > 2:1081172/1‑140 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCttt > 6:264481/1‑140 (MQ=255)
cGGGGTTAACTTTTCCCGATGAATAAGCAAACAATTCAACGCGCGCTCAATCACTTCAGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGAAATAAACCAGATACTGAGTTCGTGAGCGGCttt > 6:688236/1‑140 (MQ=255)
ggggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTc < 7:362424/140‑1 (MQ=255)
gTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCgg < 2:845138/140‑1 (MQ=255)
gTTAACTTTTCACGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCgg < 8:327907/140‑1 (MQ=255)
ttAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGAAACTGCGTGCGGGCGCGGGGTTCCggg > 2:228524/1‑140 (MQ=255)
cccGAAGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCGTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGacac < 7:648976/140‑1 (MQ=255)
taaTTAGCAAACAATTCAACGCGCTCTCATTCACTTCCGGTGAGGTCTTAGCGCACAGCTTACAGTCTTCCAGTCAGAGTCGTTGGTCATACATCATATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACAGCAGCgg < 4:613252/139‑1 (MQ=255)
ccATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCCGCCCCGCGa > 8:264601/1‑140 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 3:639138/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 4:917260/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 7:569887/140‑1 (MQ=255)
cATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGCTCTGACACCAGCGGCAGCCCAGCGaa < 5:1037761/140‑1 (MQ=255)
cATTCAACGCGCGATCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGaa < 5:574002/140‑1 (MQ=255)
ttCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATAACGCCGCTACAGCGTGCGGGCGCGGCTTTCAGGGGGAGGCCCCCAGCGGCCGCCCCGCGcaca > 1:698759/1‑140 (MQ=255)
ggctcTCAAGCACTTCCGGTGCGTTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGTGCGCGGCTTTCCTGGTGCTTACACCAGCGGCAGCACAGGGAACAGCCTTTa < 4:841431/136‑1 (MQ=255)
cgcgcTCAATCTCTTCCGGTGCGGTGTTAGCGCAAAGCTTTCAGCATTCCCGACAGCGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 8:923226/140‑1 (MQ=255)
cgcgcTCAATCCCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 2:1037543/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCGTTCCAGACTGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 1:945810/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCTTACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:314808/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:736486/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 1:1081172/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGAGACTGCGGGCGGGCGCGGCGTTAAGGGTTGTGCCACCAGCGGCCACCCCGCGAACAGCCtgtt > 8:968920/1‑137 (MQ=255)
cgcgcTCAATAACTTCCGGTGCGGTCTTATCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 3:992627/140‑1 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGGTTTAACGGTTATGAAAACAGCGGCAGCCCCGGGCACAGGCtttta > 3:870280/1‑138 (MQ=255)
gcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATACAGCAGATCCATCGAGCGGGCGCCGCTATCCCGGATCATCCAACAGCCGCAGCCCATCGAACAGCCATTaa > 4:461587/1‑140 (MQ=255)
cgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAg < 3:58597/140‑1 (MQ=255)
cTCAATCACTTCCGGTGCGGTCTTAGCGCACAGATTACAGCCTTCCAGACAGAGTCGTGGGTCATACCCCATATCCTGCGTGCGGGCGCTGGGTTCCGGGGTGAGACACCATCGGCAGCCAAGCGCACAGCCTATaacta > 6:662988/1‑137 (MQ=255)
aaTCAGTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCTGCGAACAGCCTTTAAGAAATa < 4:1091833/140‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 3:297793/140‑1 (MQ=255)
aCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAc < 6:432990/140‑1 (MQ=255)
cTTCCGGTGGGGTGTTAGCGAACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGAcc < 5:458301/140‑1 (MQ=255)
ccggtccggtCTTAGCGCACAGCTTACAGCCTTCCATACCGATTCGTGGTTCATACAGCAGATCCTGCGTGCGGGCGCTGCTTTCCGTGTTCTGACACCAGCTGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTg < 2:875891/140‑1 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAAGCAGATACTGCGTGCGGGCGCGGCTTTACGGGTTCTGACCCCAACGGCAGCCCAGCGAACAGCCGTTAACAAAAAAGACCGTg > 3:1023522/1‑140 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCCGACAGCAGATGCAGCGTGCGGGCGCGGGGTTGCGGGGTGGTCCCCCAGCCGCAGCCCCCCGCACAGCCGTTAAGAAATAAGAcccgg > 8:352152/1‑137 (MQ=255)
ggTGCGGTCTTAGCGCACAGCTTCCAGACTGCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAATAAATACGACCGTGCg < 7:133066/140‑1 (MQ=255)
gTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGGGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCCGCCCAGCGAACCGCCTATAACAAATACGCCCGTGCGGATaac > 3:798244/1‑138 (MQ=255)
tAGCGCACAGCTTACTGTCTTCCTGAGAGAGGCGTGGGTCATACAGCAGATCCTGCTTGCGGGCGGGGCTTTCCTGGTTCTGACACCAGCTGCAGCCCTGCTAACAGCCTTTAAGATATACGACCGTGCGGATACCgggg < 1:910099/140‑1 (MQ=255)
tAGCGCACAGCTTACCGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 6:752976/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACTGAGTCGTGGGTCATACAGCAGATTCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 8:678071/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGTGTAGGGGGTCATACAGCAGATCCGGCGGGCGGGCGCGGCGTGCCGGGTTCTGACACCAGCGGCATCCCAGCGAACTGCATTTAAGAAATACGACCGTGCGGATACCgggg < 4:824114/140‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGGGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 7:451276/140‑1 (MQ=255)
tAGCGCACAGCTAACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 7:871674/140‑1 (MQ=255)
aGCTCACAGCTTACAGCCTTCCAGACAGAGTCGTGCGTCAAACAGGAGATACTTCCTGAGGGGGCGGCTTTAAGGGTTATGACACCACGAGCATCCCAGCGAACATCCTTTTATAAATACCACCGAGAGGAAAACTGGGc > 6:94911/1‑140 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatc < 3:1056606/140‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatc < 5:264481/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTGCGGGGTCTGCCACCCGCGGCCGCCCCGCGGACAGCCTTTAAGAAATAAGCCCGGGCGGAACCCGGGGcccgcat > 8:1019461/1‑135 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATAAAGCAGATCCTGCGTGCGGGCGCGGCATTCCGGGTTCTGACACCCCCGGCACCCACGCCACCCCCCTGTAAGAAAAACGCCCCTGCGGGAACAGGGGccctaaa > 6:550188/1‑135 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa > 2:842540/1‑106 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAACCGAACCAACGTGAGGGGGCGGGGTNACGGCTTGAGACACCAGCGCAAGCCCACCGAAGCCCNTTTAAGAAATAAGCCCGTCCCGCTTCACGGGCcatcca > 8:61752/1‑138 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCAAACAGAAGATACAGCGTGCGGGCGCGGCGTTCCGGGGTGTGGCCCCAGCCGCCCCCCCGCGACCACCCTTAAATAAATACGTCCAGTCGGAGAACGGGGCcatgat > 2:744239/1‑140 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATACTGCGTGCGGGCGCGGCGTTCCGGGGTCTGACACCAGCGGCACCCCCGAGAACAGCCTTTAAGAAATACGACCGGGCGGAAACCGGGGGcctcat > 4:504728/1‑140 (MQ=255)
aCAGCCTTCCAGACAGAGTCGTGGGGCATAAAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGGTATGACACCCGCGGCAGCCCAGCGAACAGCCATTAAGAAATACGACCGGGCGGATACCGGGGCCAACATGGGGCg > 8:158419/1‑140 (MQ=255)
aGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAg < 6:879260/140‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGCGTGCGGGCGCGGCGTTGCGGGTTCTGACCCCCGCGGCAGCCCAGCGCACAGCCGTTAAGAAATACGACCGGGCGGGTACCGGGGCCATGATGGGGCGAGGAGCg > 4:718060/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTGATACAGCAGATCCGGCGTGCGGGCGCGGCTTTCCGGGGTCAGACACCAGCCGCCGCCCCGCCCACAGACTTTAATAAAATCGACCCGTCGGCTAACAGGGCCCTGAAGGGGGGAGTAGCg > 2:161847/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGATCCAGCGTGCGGGCGCGGCGTTCCGGGGTCGGACACCAGCGGCAGCCCCGCGAACAGCCGTTAAGAAAAACGCCCGTGCGGATACCGGGGCCATCATTGGTCGAGGAGCg > 8:658788/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTCATAAAGCAGATCCGGCGTGGGGGCGCGGCGTTCCGGGTTCTGACCCCCGCGGCCGCCCCGCGCACAGCCGTTTATAAATACGACCCTGCGGTTACCCGGGCCCTCCAGGGTCgcggtgcg > 2:733384/1‑133 (MQ=255)
tCCAGACAGAGTCGTGGGTAATACAGCAGATACAGCGTTCGGGCGCGGCTTTACCGGGTCTGACACCCGCGGCAGCCCCGCGAACAGACATTAAGAAATACGCACGGTCGGATACCGGGGGCCTCATTGGGTGAGGAGCg > 6:407263/1‑140 (MQ=255)
tCCAGACAGAGTCGTGGGTAATAAATCAGATCCAGCGTTCGGGCGAAGCTTTACCGGTTATTCAACCAGCGGCATCCCAGCAAACAACCTTTAAGAAAAAAAACAAGGCGGATACCAGGGCCCAAATGGCTCGatgatcg > 6:818645/1‑134 (MQ=255)
cagacagaGTCGTGGGTCTTACAGCACATCCTGCGGGCGGGCGCGGCTTTCCGGTTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATAAGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGtt < 8:523299/140‑1 (MQ=255)
agTCGTGGGTCATACAGCCGATCCGGCGTGCGGGCGGGGCTTTCCGGGTTGTGACCCCCGCGGCAGCCCCGCGAACCGCCGTTAAGAAATACGCCCGGGCGGATACCCGGGCCAACATGGGGCGAGGAGCGGTGAATAtt > 2:1004847/1‑140 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGGGTTACGGGTTGTGACACCAGCGGCAGCCCCGCGAACAGCCATTAATAAATACGACCGTGCGGCTACCGGGGCCATCATGGGGGGAGGAGCGGTGAATAtt > 2:12611/1‑140 (MQ=255)
agTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGTTGTGCCCCCACCCGCCGCCCCGCGCACAGCCGTTTAGAAATAACACCGTGCGGATACCGGGGGCCTCATGGGGGGAGGAGCGTTGAATAtt > 2:982268/1‑140 (MQ=255)
cGTGGGTCATACAGCATCTCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGCCCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 1:764829/140‑1 (MQ=255)
cGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 2:266851/140‑1 (MQ=255)
cATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTAGAGTAGCGTTGAATATTGAAAATCATa > 8:797167/1‑140 (MQ=255)
cATACAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATAAGACCCTGCGGAAACCGGGGCCATCATGGGACGAGTAGCGTTGAATATTGAAAATCATa > 8:637850/1‑140 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCCGCGAACAGCCGTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 4:470531/1‑140 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACTACCGTGCGGATACCGGGGCCATCATGGGTCGAGGAGCGTTGAATATTGAAAATCATAgg > 4:992701/1‑139 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgggg < 3:490095/99‑1 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 3:178430/1‑140 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 4:304393/1‑140 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGCGTCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 3:865439/1‑140 (MQ=255)
tACAGCAGATCCTGCGTGCGCGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAAAACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGCATATCATAGt > 6:335890/1‑140 (MQ=255)
cagcagTTCATGAGTGCGTGCGCGGCTTTCCGGGTTTTGACACCAGGGGCAGCCCAGCTAACAGGCTTTAATAAATACGACCGTGCGTTTTCCGGGGCCATCATGTGTCGAGTAGCGTTGAATATTGAAAATAATAGTTg < 4:340630/140‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCCGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 3:953617/140‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 5:28147/140‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 4:165285/140‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCTGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 2:578268/140‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGGGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 1:945833/140‑1 (MQ=255)
cagcagATCATGCGCGCGGGCGCTGCTTTCCGGGTTCTGACCCCTGCGGCAGCCCAGCGAACACCCTGTAAGAAATACTACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 7:312383/140‑1 (MQ=255)
cagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCct > 8:243918/1‑140 (MQ=255)
cagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCct < 1:316877/140‑1 (MQ=255)
cagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCct > 1:1089453/1‑140 (MQ=255)
cagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCct > 7:499618/1‑140 (MQ=255)
gATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctct > 2:245758/1‑140 (MQ=255)
gATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctct > 4:19036/1‑140 (MQ=255)
aTCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGTCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctctc > 5:777779/1‑140 (MQ=255)
ccTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTg > 6:283554/1‑140 (MQ=255)
ccTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTg > 4:1067393/1‑140 (MQ=255)
tgcgtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGAGAACAGCCTTTAATAAATACGACCGTGCGGATACCGTGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGtt < 2:526226/140‑1 (MQ=255)
gtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGTGGCCATCATTCGTCGCTTAGCGTTGAATATTGAAAATAATATTTGCCTCTCTGTGTCg > 1:474522/1‑140 (MQ=255)
gtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCg > 1:790596/1‑140 (MQ=255)
gtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCg > 6:808262/1‑140 (MQ=255)
gtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCg > 5:600884/1‑140 (MQ=255)
gtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCg > 2:323239/1‑140 (MQ=255)
cgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGGGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGGTc > 4:239459/1‑140 (MQ=255)
cgGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGTTCAAACAt > 6:199685/1‑140 (MQ=255)
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TCCGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGTTCAAACAT > NZ_CP022686/4368233‑4368507
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
