Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F35 I0 R1
|
157 |
6985.9 |
8006972 |
98.3% |
7870853 |
134.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
4,368,372 |
T→G |
14.6% |
S37R (AGC→CGC) |
ybiY ← |
glycyl‑radical enzyme activating protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 4,368,372 | 0 | T | G | 14.6%
| 270.3
/ 8.1
| 135 | S37R (AGC→CGC) | ybiY | glycyl‑radical enzyme activating protein |
| Reads supporting (aligned to +/- strand): ref base T (41/69); new base G (22/2); total (64/71) |
| Fisher's exact test for biased strand distribution p-value = 7.08e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 141 total aligned reads displayed.
CGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGTTCAAAC > NZ_CP022686/4368235‑4368505
|
cGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTACAGACAGAGTCGTGGGTCAAACAGAATCTACTGAGTGCGGGCGCGGCt > 6:902289/1‑138 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGCAACTGCGTGCGGGCGCGGCgtt > 3:179899/1‑138 (MQ=255)
gggTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCttt > 1:216104/1‑138 (MQ=255)
cTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGACGTGGGTCATACAGCAGATCCTGCGGGCGGGCGCGGCTGTACggggt > 5:430783/1‑136 (MQ=255)
tCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAACCAGCAACTGCCTGCGGGCGCGGCGTTCCGGGGTCTGacc > 8:351214/1‑139 (MQ=255)
aTAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCgg < 6:983484/138‑1 (MQ=255)
aTAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGCTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCgg < 6:806311/138‑1 (MQ=255)
ccATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTAATACAGCAGATACAGCGTGCGGGCGCGGCTTTACGGGTTCTTACACCAGCGGCACCCCAGc > 5:608465/1‑138 (MQ=255)
tCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAg < 8:411323/140‑1 (MQ=255)
cAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGATACTGCGTGCCGGCGCGGCGTTCCGGGGTCTGAAACCCGCGGCCTCCCAGCGAACa > 2:809664/1‑138 (MQ=255)
ggcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACTGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCTGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 6:31675/137‑1 (MQ=255)
cgcgcTCTATCACTTCCGGTGCGTGCTTAGCGCACAGCTTACAGCTTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 5:756173/138‑1 (MQ=255)
cgcgcTCAATCCCTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCTTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 2:643622/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 5:867138/138‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 8:952702/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:415950/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:818404/140‑1 (MQ=255)
cgcgcTCAATCACTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCtt < 6:459634/138‑1 (MQ=255)
cgcgcTCAAGCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACCGAGGCGTGGGTCATACAGCAGCTCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTa < 7:596290/140‑1 (MQ=255)
gcTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATGCTGCGTGCGGGCGCGGGGTTACGGGTTCTTACCCCAACGGCCGCCCAGCGAACACCCATTaa > 2:476203/1‑138 (MQ=255)
gaaaTCACTTCCGTTGCGGTATTCGCGCACTGATTACAGCCTTCCAGACAGAGTCGTGGGTCTTACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGGAGCCCTGCGAACCGCCTTTAAGa < 5:124421/136‑1 (MQ=255)
aCTTCCGGTGCGGGCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACg < 4:562553/138‑1 (MQ=255)
cTTCCGGTGCGGTCTTAGCGCCCAGCTTACAGACTTCCAGACAGAGTCGTGGTTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGa < 5:195039/138‑1 (MQ=255)
ccGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATCCTGGGTGCGGGCGGGGCTTTGCGGGGTGGGACACCAGCGGCCGCCCCCCGCACACCCGTTTAGAAATACGACCGTg > 7:821926/1‑140 (MQ=255)
ggTGCGGTCTTATCGCACAGCTTACAGCCTTCCAGACAGATTCGTGGGTCATAAATCAGATACAGCGTTCTGGCGCGGCTTTGAGGGTTATGACCACAGAGGCAGGCCAGCGAAACGCCTTTTAGAAATACGCCCGTg > 6:574411/1‑138 (MQ=255)
ggTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCg < 8:551390/140‑1 (MQ=255)
ggTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGCTGCTGGGTGCGGGCGCGGCGGTCCGGGGTGAGACACCAGCGGCCGCCCCGCGACCCGCCGTTTAGAAATACGACCggg > 2:322049/1‑136 (MQ=255)
tGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGGGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCCGCCCCGCGCACAGCCATTAAAAAAAACGCCCGTGCg > 6:726510/1‑138 (MQ=255)
ggCGGTCTTAGCGCACAGCTTACAGACTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCg < 4:546827/137‑1 (MQ=255)
agacagcTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGa < 7:833074/134‑1 (MQ=255)
cGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGCATACAGCAGCTACTGCGTTCGGGCGCGGGGTTACGGGGTCTGACACCCGCGGCCGCCCAGCGAACAGCCGTTAATAAATACGGCCGTGCggg > 4:313122/1‑137 (MQ=255)
ggTCTTAGCGAACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGAt < 3:518499/138‑1 (MQ=255)
tCTTAGCGCACATCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGAGGGCGCTGCTTTCCGGGGTCTGAAACCCTCGGCAGCCCAGCGAACAGCCTTTAATAAATACGACAGTGCGGATAc < 3:1018782/138‑1 (MQ=255)
cTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGCAACAGCAGATCCTGCGTGCGGGCGCGGCGTTGCGGGGTCTGGCACCCCCGGCCGCCCACCGCAACGCCGTTAATAAATACGCCCGTGCGGCTAcc > 6:6723/1‑138 (MQ=255)
cTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGGGATAAAGCAGCTCCTGCGTTACGGCGCGGCTTTACGGGTTATGACACCCGCGGCCGCCCAGCGAACAGCCGTTAAGAAATAAGACCGTGGGGAGAcc > 2:442273/1‑138 (MQ=255)
tAGCGCACTGCTTACAGCCTTCCAGACAGAGTCGGGGGTAATACAGCATATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 5:6719/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 5:505380/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 2:38331/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 6:259364/138‑1 (MQ=255)
tAGCGCACAGCTTACAGCCATCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCgg < 4:674203/138‑1 (MQ=255)
aaGCGCACAGCTTACTGCCTTCCAGACAGAGTCGTTGGTCATACAGCAGATCATGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGATATACGACCGTGCGGATACCgg < 6:621837/137‑1 (MQ=255)
aGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATAAACCAGATCCTGCGTGCGGGCGCGGGTTTACGGGGTCTGACACCCGCGGCCGCCCAGCGCCCCGCCTTTAATCAAAACCACCGTGCGGGTACCggggg > 8:659480/1‑139 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCca < 3:34801/138‑1 (MQ=255)
cacaGCTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatc < 8:69122/140‑1 (MQ=255)
caGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCcatc < 1:1010305/138‑1 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTGATACAGCAGATACTGCGTGCGGGCGCGGCGTTCCGGGGTATGACCCCAGCCGCAGCCCAGCGAACAGCCGTTAAGAAATACGACCGTGCGGATACCGGGGCcacggtct > 8:833074/1‑134 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGTTCCGGGGTGCGGGCGCGGCGGTGCGGGTTATGACACCAACGGCAGCCCAGCGGAACGCCTTTTAGAAATACGACCGTGCGGATACCGGGGcccataa > 4:917392/1‑133 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGGTCCAGCGGGCGGGCGCGGGGTTCCGGGTTGTGACACCAGCGGCAGCCCAGCGAACAGCCATTAATAAATACTACCGGGGGGATACCGGGGCcatcaa > 6:829391/1‑137 (MQ=255)
gCTTACAGCCTTCCAGACAGAGTCGTGGGGGATACAGCAGGTCCTGCGTGCGGGCGCGGGGTTGCGGGTTAGGTCACCACCGGCCGCCCCCCCAACCGCCGTTTAGAAATAAGGCCGGGCGGGGGCCGGGGGcaggat > 6:149767/1‑134 (MQ=255)
cTTACAGCCTTCCTGACTGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCGGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 6:239364/138‑1 (MQ=255)
cTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 5:938910/138‑1 (MQ=255)
cTTACAGCCTTCCAGACAGAGGCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATg < 6:695600/138‑1 (MQ=255)
ccccTTCCAGCCAGTGTCGTGGGACATACAGCCGATCCTGCGTGCGGGCGCGGCTTTCAGGTTTCTTACACCAGAGTCAGACCATCTAACAGCCTTTAAGAAATACGACCGTGCGTATACCGGGGCCATCATGGGTCGat < 8:776378/138‑2 (MQ=255)
aGCCTTCCAGACAGAGTGGGGGGTCTTACTGATGAGCGTGGGTGCGGGCGGGTCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCg < 1:967133/138‑1 (MQ=255)
aGCCTTCCAGACAGAGTCGTGGGTCATACCGCAGAACCTGCGGGCGGGCGCGGCGGTCCGGGGTGTGACACCAGCGGCCGCCCCGCGACCAGCCATTAAGAAATAAGACCGTGCGGATTCCCGGGCCATCCTGGGTCg > 6:4253/1‑138 (MQ=255)
aGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCg < 1:719285/138‑1 (MQ=255)
aGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCg < 1:448815/138‑1 (MQ=255)
tCCAGACAGAGTCGTGGGTCATACAGCAGCACCAGCGTGCGGGCGCCGCGTTCCGGGTTCTGACCACAGCGGCAGCCCCGCGAACACCCATTAAGAAATACGCCCGTGCGGATACCGGGGCCAACAAGGGTCGAGGAGCg > 8:145419/1‑140 (MQ=255)
cagacagaGTCGTGGGTCATACAGCCGATCCTGCGTGCGGGCGCGGCGTTACGGGGTCTGCCACCAGCGGCCGCCCCGCGAACAGCCGTTTAGAAAAACGGCCGGGCGGCTACCGGGGCCATCATGGGGGGAGGAGCg > 4:231428/1‑138 (MQ=255)
cagacagaGTCGTGGGTCATACAGCAGATCCTGCGTTCGGGCGCGGCTTTCCGGGTTCTGACACCCGCGGCAGCCCAGCGAACAGCCTTTTAGAAATACGACCGGGCGGATTCCGGGGCCATCATGGGGCGAGTAGCg > 2:780219/1‑138 (MQ=255)
cagacagaGTCGTGGGTCAAACAGCAGATACATCGTGCGGGCGCGGCGATCCGGGTTATGACCCCACCGGCAGCCCAACGAACAGCCATTAAGAAATACGACCCTGCGGATACAGGGGCCCTCATGGGGCGAGTAgag > 4:454187/1‑136 (MQ=255)
agagGCGTGGGTAAAACATCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTAAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAata < 7:627330/140‑1 (MQ=255)
tgTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAata < 4:830988/137‑1 (MQ=255)
tgTCGTGGGTAATTTAGTAGTTCCTGCTTGCGGGCGCGGCTTTGCGGGTTCTTAGACCAGCGGCAGCCCAGCGAACATCCTTTAAGATATACGTCCGTGCGGTTACGGGGGCCTTCATGGGTCGATTAGCGTTGTatt < 4:559690/137‑2 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAata < 5:461465/138‑1 (MQ=255)
agTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCGTTCCGGGGTATGACCCCCGCGGCAGCCCAGCGGCCAGCCTTTTAGAAATAAGCCCGTGCGGATAACGGGGCCAACATGGGGCGAGGAGCGTTGAATAtt > 8:406951/1‑140 (MQ=255)
agTCGTGGGTAATACAGCAGATCCTGCGTGCGGGCGCGGCTTTACGGGTTCTGACACCAGCGGCAGCCCAGCGAACACCCGTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGTGGCGAGTAGCGTTGAAAAtt > 8:680021/1‑140 (MQ=255)
agTCGTGGGGCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTGCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAata < 3:953288/138‑1 (MQ=255)
tCGTGGGTGATACAGCATCTCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGCCACCAGCGTCAGCCCCGCGAACAGCCTTTAAGAAAAACGACCGGGCGGGAACCGGGGCCCTCATGGGTGGAGTTGCGTTGAATAtt > 2:645354/1‑138 (MQ=255)
cGTGGTTCATACATCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGTTCCATCATGGGTCGAGTAGCGTTGAATATTg < 5:739593/138‑1 (MQ=255)
gTGGGTCATAAAGCAGATCCTGCGTGCGGGCGCGGCATTCCGGGTTATGACACCCGCCGCAGCCCCCCGAACAGCCTTTAATAAAATCCACCGGGAGGATACCCTGGGCATCATGGGTCGGTTTGCGTTGAATAttta > 6:346577/1‑136 (MQ=255)
ggtgTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGAAGCCCAGCGAACAGCCTTTAATAAATACTACAGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGaa < 4:856316/135‑1 (MQ=255)
tACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 8:148725/1‑140 (MQ=255)
cagcagTTCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGACCAGCGATCAGACTTTAAGAAATACGACCGTGCGGATACCGGGGACATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt < 4:560322/138‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 3:217437/1‑138 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt < 6:921132/138‑1 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 3:648210/1‑138 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGt > 2:262480/1‑138 (MQ=255)
cagcagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGGCGAGTAGCGTTGAATATTGAAAATCATAGt > 6:39580/1‑138 (MQ=255)
cagcagATCCTGCGTGCGGGCGAGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTAAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGTTCGACTAGCGTTGAATATTTAAAATCATAGt > 2:172145/1‑138 (MQ=255)
cagATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACCGCCTTTAAGAACTACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGTATATTGAATATCATAGTTGcgg > 7:283269/1‑138 (MQ=255)
gctCCTGCGGGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctct < 7:214261/138‑1 (MQ=255)
gATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAAAAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGGTGAATATTGAAAATGATAGTTGCctct > 8:892532/1‑140 (MQ=255)
aTCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCAAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAACTCATAGTTGCctc > 3:635684/1‑138 (MQ=255)
ccTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctctc > 6:979330/1‑138 (MQ=255)
ccTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctctc > 4:601268/1‑138 (MQ=255)
ccTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCctctc > 2:480984/1‑138 (MQ=255)
ccTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGCATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATATATGCctcta > 3:146433/1‑137 (MQ=255)
gcgtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGttt > 8:558245/1‑140 (MQ=255)
gtgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGttt > 3:429461/1‑138 (MQ=255)
tgcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCACTCTGTTTc > 6:550706/1‑138 (MQ=255)
gcgGGCGCGGCTTTCCGGGTTCTGCCCCCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGGCGCGTTGAATATTGACAATCATAGTTGCCTCTCTGTTTCg > 2:752313/1‑138 (MQ=255)
gcgGGCGCGGCTTTCCGGGTTCTGACCCCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCAGCATGGGTCGAGTAGCGTTGAATATTGAAAATCAGAGTTGCCTCGCTGTGTCg > 4:247508/1‑138 (MQ=255)
gcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCCGCGAACAGCCTTAAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCg > 1:479211/1‑138 (MQ=255)
gcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg > 3:828916/1‑125 (MQ=255)
gcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTg < 4:828916/125‑1 (MQ=255)
gcgGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGACTCTCTGTTTCg > 1:112768/1‑138 (MQ=255)
gggCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCTAACAGCCTTTAATAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGtt < 1:864389/138‑1 (MQ=255)
gggCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGtt < 3:1002692/138‑1 (MQ=255)
gcgcGGCTTTCCGGGGTCGGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGTTCa < 5:2209/138‑1 (MQ=255)
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CGGGGTTAACTTTTCCCGATGAATAAGCAAACCATTCAACGCGCGCTCAATCACTTCCGGTGCGGTCTTAGCGCACAGCTTACAGCCTTCCAGACAGAGTCGTGGGTCATACAGCAGATCCTGCGTGCGGGCGCGGCTTTCCGGGTTCTGACACCAGCGGCAGCCCAGCGAACAGCCTTTAAGAAATACGACCGTGCGGATACCGGGGCCATCATGGGTCGAGTAGCGTTGAATATTGAAAATCATAGTTGCCTCTCTGTTTCGTTCAAAC > NZ_CP022686/4368235‑4368505
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
