Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I0 R1
|
235 |
6960.4 |
9135780 |
98.4% |
8989607 |
135.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NZ_CP022686 |
1,479,619 |
T→A |
10.3% |
intergenic (‑28/+165) |
ftsB ← / ← ygbE |
cell division protein FtsB/DUF3561 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP022686 | 1,479,619 | 0 | T | A | 10.3%
| 491.4
/ 3.0
| 206 | intergenic (‑28/+165) | ftsB/ygbE | cell division protein FtsB/DUF3561 family protein |
| Reads supporting (aligned to +/- strand): ref base T (123/54); new base A (2/14); total (125/81) |
| Fisher's exact test for biased strand distribution p-value = 1.08e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 209 total aligned reads displayed.
CGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGATTGAATTAT > NZ_CP022686/1479481‑1479758
|
cgccACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATc < 1:935630/140‑1 (MQ=255)
catcatTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCa < 4:282095/138‑1 (MQ=255)
aatcatTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATg < 7:253929/139‑1 (MQ=255)
attattGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCa > 3:774983/1‑138 (MQ=255)
attGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGa > 6:594565/1‑140 (MQ=255)
gACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑ga > 7:314825/1‑140 (MQ=255)
aCGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATATTCATCCCATGAATCCGAA‑gac > 8:57280/1‑140 (MQ=255)
gcgAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCTTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑gacgc > 2:958205/1‑139 (MQ=255)
gAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑gacga > 3:655269/1‑138 (MQ=255)
aGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGActc > 1:707842/1‑140 (MQ=255)
aGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCGGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGActa > 6:442583/1‑139 (MQ=255)
tCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGCCCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATcc > 1:178128/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCTAA‑GACGACTCTACCACCTCTg > 8:149220/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 2:499445/1‑140 (MQ=255)
gTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTg > 6:1114141/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCctct > 4:698841/1‑138 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGt > 7:1043642/1‑140 (MQ=255)
tataCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGt > 5:854147/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCCTCCCATGCATCCGAA‑GCCGCCTCTACCTCCTCTGTTg > 8:1017057/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTg > 2:855715/1‑140 (MQ=255)
taCCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTg > 2:826154/1‑140 (MQ=255)
cGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 5:1008553/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 4:408440/1‑138 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 3:19293/1‑138 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 5:767752/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 7:606139/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCAACCCATGGATCAGAA‑GACGACTCTACGTCCTCTGTTGGGGAt > 7:571300/1‑140 (MQ=255)
ttCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCCTAAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGCCTCTACATCCTCTGTTGGGGAt > 8:659616/1‑140 (MQ=255)
tacTTACCGAACCACAGCGAATACTGTAGCCAGAGCAGAATAGCCAGCATCAGCAGCCTTAGTTTACCCATCCTGCCCCCAGATACACGGCATCTTCATCCAATGCATCCGAA‑GACGACTCTACATCCTCTGTTgggg > 3:701051/3‑138 (MQ=255)
tCTTCCCAAACCACACCTAATCCTTTAGCCACACAATAATAGCCAGCAACAGCAGCGTTAGTTAACCCATCCTGCCCCCTTAAAACGGGCATCTTCATCCCATGATTCCCAA‑CACGACTCTACATCCTCTGTTGGGGATa < 8:801350/140‑1 (MQ=255)
tttACCCACCCCCAGCGAATAATTTAGCCAGACCATAATAGCCAGCAACAGCTGCGTTTTTTTCCCCACCCTGCCCCATTAAAACCGGCATCTTCATCCCATGCACCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc < 8:683723/139‑1 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCCTCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 3:1044401/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GCCGACTCTACATCCTCTGTTGGGGAt > 4:483311/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GCCGACTCTACATCCTCTGTTGGGGATAc > 7:238036/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:755341/1‑138 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 5:563886/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATAc > 8:902328/1‑140 (MQ=255)
cTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCAGCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGAt > 4:260827/1‑138 (MQ=255)
gAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGAc > 7:408391/1‑140 (MQ=255)
gAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGAc > 2:334994/1‑140 (MQ=255)
aCCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATACTCTGTTGGGGATACCGCGACaa > 1:1028678/1‑140 (MQ=255)
cacaGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACaa > 4:135321/1‑138 (MQ=255)
ctaaTACTGTAGCCCTACCCTAATCGCCCGAAACAGCAGCTTTCGTTTACCTATCATGCCCCCTTAAAAACGTAAGCTTCATCCCATGCACCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCgg < 4:662476/136‑1 (MQ=255)
ctaaTACTGTAGCCAGACCACAATCCCCACCAACAGCCGCGTTAGTTACCCAAACCTCCCCCCTAAAAAACGCCATCTTAAACCCATCCATCCCAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGc < 6:815748/138‑1 (MQ=255)
cGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACACCGCgg > 3:1120367/1‑138 (MQ=255)
cGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCgg > 4:76558/1‑138 (MQ=255)
cGAATACTGTACCCACACCACAACACCCACCACCCGCTGCGTTATTTAACCCAACCCGCCCCCTCAAACACGCCATCTTCACCCAATCCCCCCCAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCgg < 4:779803/138‑1 (MQ=255)
aaTACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCaa > 7:975483/1‑140 (MQ=255)
aaTACTGCAGCCCCACCACAATCGCCCCCAACAGCAGCGTTAGTTTCCCCACCCTGCCCCCTTAAAACCGGCATCTCCACCCCATGCATCCGAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCaa < 8:486918/140‑1 (MQ=255)
ttAGCCATACCATAATACCCAGCAACTGCTGGGTTAGTTTACCAATCCTGCCCCCTCAAAACCGGCATCTTCATCCCATGCATCCTAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGt < 4:1055072/137‑1 (MQ=255)
ttAGCCACACCCCCATCGCCACCAACAGCAGCTTTATTTAACCCATCCTCCCCCCTGAAAAACGGCATCTTCAACCCATGCACCCCAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTAc < 6:224541/139‑1 (MQ=255)
aGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTACATCCCATGCATCCGAA‑GACGACTCTACTACCTCTGTTGCGGATACCGCGACAACGCGGGCAAATGTAc > 3:308505/1‑138 (MQ=255)
cccgaccagaATACCCAGCAACCGCAGCGTTATTTTACCCACCCTCCCCCCTGAAAAACGCCATCTTCCTCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACca < 4:596905/135‑1 (MQ=255)
cagaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACcacaa > 7:187833/1‑139 (MQ=255)
cagaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAt > 5:980661/1‑140 (MQ=255)
agaccagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACcaca > 3:333469/1‑138 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGTGCAAATGTACCACAtttt > 6:316913/1‑139 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTTCCACATTTg > 2:108036/1‑140 (MQ=255)
accagaATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTg > 5:107466/1‑140 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 8:418264/1‑140 (MQ=255)
aaTAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAt > 2:201797/1‑140 (MQ=255)
acccagcaccagcaGCGTTAGTTTACCCAGCCTCCCCCCTCAAAAACGGCACCTTCATCCCATCCATCCTAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 4:642346/136‑1 (MQ=255)
acccaccaACAGCAGCGTTATTTTACCCATCCACCCCACTCAAAAACGGCATCTTAAACCCATGCACCCGAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGAtt < 3:752517/136‑1 (MQ=255)
acccAGCACCCGCTGGGTTAGTTTCCCCAACCCGCCCCCTCAAAACCGGCATCTTCACCCCATCCACCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 5:498691/138‑1 (MQ=255)
acccAGCAACAGCATCGTTAGTTTACCCATCCTGCCCCCTCAAAACCGGCATCTTCATCCCATCCAACCGAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 1:1105081/138‑1 (MQ=255)
aGCCAGAAACACCAGCGTTAGTTAACCCATCCTGCCCCCTCAAAAACGGCACTTTCATCCCAGGCATCCGAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGt < 8:974860/140‑1 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGCCTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa > 1:439525/1‑140 (MQ=255)
ccAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACAACCTCTGTTGGGGATACAGCTACAACGAGGGCAAATGTACCACATTTGTCGATTGTTa > 7:834608/1‑140 (MQ=255)
ctcAACAGCAGCTTTATTTTACACATCCTGCCCCATCAAATACGGATTATTAATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGTGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTa < 3:633899/136‑1 (MQ=255)
cgCAACACCTGCGTTTTTTAACCCATCCTGCCCCATAAAAACCGGATTCTTCAACCCATGAATCCTAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 8:314825/139‑1 (MQ=255)
accAACCGCAGGGTTTGTTTACCCATCCTCCCCCCTGAAAAACGGCATCTTCATCCCATCAATCGGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 5:877653/138‑1 (MQ=255)
aGCAACAGCAGCGTTTGTTTACCCACCCTGCCCCATTAAAAACGGCATCTTCATCCGATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg < 6:955543/140‑1 (MQ=255)
aGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 1:246042/1‑140 (MQ=255)
cacacgcagtGTTAGTTACCCAAGCCGCCCCCCTCAAAAACCTAATGATCAACCCAT‑CATCCCAACGACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta < 1:771800/135‑1 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 3:57147/1‑138 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACg > 3:993635/1‑138 (MQ=255)
cAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGta > 5:538930/1‑140 (MQ=255)
gcGTTTTTTTACCAATCCTGCCCCCTGAAAAACGGAATATTCATCCCTTGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAgg < 6:129136/140‑1 (MQ=255)
ttttaacccacccGCCCCCCTGAAAAACGGCATCTCCACCCCTTGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTg < 1:815442/135‑1 (MQ=255)
aGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCg > 3:961610/1‑138 (MQ=255)
gTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGc > 2:1053165/1‑140 (MQ=255)
ttACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACAttt < 4:826924/109‑1 (MQ=255)
aCCCATCCTGCCCCCTGAAAAACGGCATATTCATCCCATGCATCCCAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGaa < 2:569460/140‑1 (MQ=255)
ccATCCTCCCCCGTCAAAACCGGCATCTTCAACCCATGCATCCCAC‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACa < 8:730949/140‑1 (MQ=255)
tCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACAt > 3:261688/1‑138 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATCCCCAGGGCGTGCAGAACATAAt > 6:186368/1‑140 (MQ=255)
ccTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt > 7:456866/1‑140 (MQ=255)
ccTGCCCCCTAAAAACCGGCACCTTCATCCCATGCATCCCAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 6:671480/140‑1 (MQ=255)
ccTCCCCCATTAAAACCGCCAGCTTCACCCCCTGAATCCGAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAAt < 7:50462/140‑1 (MQ=255)
cccccTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCa > 8:81961/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACAGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCattatt > 2:933309/1‑140 (MQ=255)
tGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCATCATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATAGTTAAGTATACCCAGGTCGTGCAGAAAAAAATCTCattatt > 7:75953/1‑140 (MQ=255)
aaaggccATCTTCACCCCATGAATCCGAA‑CACGACTCTACATCCTATGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAg < 3:53270/132‑1 (MQ=255)
aaaCGCTATCTTCATCCCATGCACCCGAA‑CACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAg < 3:918450/138‑1 (MQ=255)
cGGCATATTCATCCCATTCATACGAA‑GACGACTCTACATCCTCTGTTTGGGATAACGCGACAACGCGGGAAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGCACATAATATCATTATAAGTTACg > 6:883129/1‑140 (MQ=255)
tttttcttcCCATCCATCCGAT‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTAACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGAtt < 6:767752/137‑1 (MQ=255)
ctattCATCCCATGCAGCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGAtt < 5:718089/137‑1 (MQ=255)
atatgcATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGa < 3:413180/133‑1 (MQ=255)
atacATCACATGCATCCTCA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGATTGa < 7:710309/137‑1 (MQ=255)
aaTCCCATCCATCCTAC‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGATTGAAtt < 2:662060/139‑1 (MQ=255)
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CGCCACATCATTATTGACGCGAGTATAGTCATGTATACCGTTCTTACCGAACCACAGCGAATACTGTAGCCAGACCAGAATAGCCAGCAACAGCAGCGTTAGTTTACCCATCCTGCCCCCTGAAAAACGGCATCTTCATCCCATGCATCCGAA‑GACGACTCTACATCCTCTGTTGGGGATACCGCGACAACGCGGGCAAATGTACCACATTTGTCGATTGTTACGTATACCCAGGGCGTGCAGAACATAATCTCATTATTAGTTACGGATTGAATTAT > NZ_CP022686/1479481‑1479758
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
