Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F21 I1 R7
|
781 |
589.5 |
21734725 |
98.3% |
21365234 |
134.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NZ_CP025268 |
1,219,333 |
G→A |
intergenic (‑230/+27) |
iraM ← / ← CXP41_RS24360 |
anti‑adapter protein IraM/protein YmgK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP025268 | 1,219,333 | 0 | G | A | 100.0%
| 24.8
/ NA
| 8 | intergenic (‑230/+27) | iraM/CXP41_RS24360 | anti‑adapter protein IraM/protein YmgK |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/4); total (4/4) |
AATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATGCATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTT > NZ_CP025268/1219252‑1219417
|
aaTTGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCa < 1:2940967/140‑1 (MQ=255)
gATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAAttt > 1:3220393/1‑140 (MQ=255)
aaTGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCa > 2:5936826/1‑67 (MQ=255)
aaTGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATCCTACTTTGTGCCa < 1:5936826/67‑1 (MQ=255)
aTGTTATACATTCAAATGACTGAGCATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCttt > 1:8239810/1‑92 (MQ=255)
aTGTTATACATTCAAATGACTGAGCATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCttt < 2:8239809/92‑1 (MQ=255)
aTGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACAt > 1:4692460/1‑43 (MQ=255)
aTGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACAt < 2:4692460/43‑1 (MQ=255)
|
AATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATGCATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTT > NZ_CP025268/1219252‑1219417
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATGCATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAGTTATA > NZ_CP025268/1219184‑1219481
|
cccccccccccccccccccccccccccccccccccccctattcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggggatgtgtataagagacagATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATAC < SRR14920197.4627051/43‑1 (MQ=60)
CCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATAC < SRR14920197.10573704/151‑1 (MQ=60)
CCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATAC < SRR14920197.10574027/151‑1 (MQ=60)
AAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATACATTCAAATGAC < SRR14920197.7554104/151‑1 (MQ=60)
ccccccccccccccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAAC < SRR14920197.5417507/47‑1 (MQ=60)
ccccccccccccccccccccccccccccccctttttcaagcagaagacggcatacgagatgtagtgaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACAT < SRR14920197.3410290/49‑1 (MQ=60)
ccccccccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCC < SRR14920197.11262736/53‑1 (MQ=60)
cccccccccccccccccccccttttccagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGC < SRR14920197.8094049/60‑1 (MQ=60)
cccccccccccccccccccccttttcaagcagaagacggcatacgcgatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGC < SRR14920197.2609051/60‑1 (MQ=60)
cccccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagTGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTAC < SRR14920197.10092891/56‑1 (MQ=60)
ccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTT < SRR14920197.8977704/65‑1 (MQ=60)
ccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTT < SRR14920197.10757000/59‑1 (MQ=60)
ccccccccccccccccccccccccttttcaagcagaagacggcatacgcgatgtagagaggtctcgtgggctcggagatgtgtataagagacagGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTT < SRR14920197.3634260/57‑1 (MQ=60)
ccccccccccccccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTT < SRR14920197.3634476/57‑1 (MQ=60)
ccccccccccccttttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATT < SRR14920197.7619530/69‑1 (MQ=60)
GAATCTCAATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTT > SRR14920197.3360708/1‑151 (MQ=60)
cagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagTGTTTAGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATCCTACTTTGTGCCAATTTGCTAAAC < SRR14920197.6195825/89‑1 (MQ=60)
AATTGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAAC < SRR14920197.3068908/151‑1 (MQ=60)
ctcttcaagcagaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTAT < SRR14920197.1033188/80‑1 (MQ=60)
tttcatgcagttgacggcttacgcgatgtagagaggtctcgtgggctcggagatgtgtataagagacagGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGT < SRR14920197.4668595/82‑1 (MQ=60)
agaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGG < SRR14920197.2072354/90‑1 (MQ=60)
ttcaagcagaagacggcatacgcgatgtagagaggtctcgtgggctcggagatgtgtataagagacagGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGT < SRR14920197.1586329/83‑1 (MQ=60)
gaagacggcatacgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGT < SRR14920197.1356724/91‑1 (MQ=60)
gcatacgcgatgtagagaggtctcgtgggctcggagatgtgtataagagacagATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATAT < SRR14920197.8515144/98‑1 (MQ=60)
gcatacgcgatgtagagaggtctcgtgggctcggagatgtgtataagagacagGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAA < SRR14920197.7555729/98‑1 (MQ=60)
ccgagatgtagagaggtctcgtgggctcggagatgtgtataagagacagATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCATTTTGCTAAACATTATGGTTGCCTTTTTATATTACG < SRR14920197.1670380/102‑1 (MQ=60)
gtagagaggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGA < SRR14920197.5676223/109‑1 (MQ=60)
aggtctcgtgggctcggagatgtgtataagagacagGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGATAATAA < SRR14920197.6754856/115‑1 (MQ=60)
agagaggtctcgtgggctcggagatgtgtataagagacagATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGATAATAATG < SRR14920197.772576/111‑1 (MQ=60)
GTTTAGCTATAATGTTATACATTCAAATGACTGAGCATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGActgtctcttatacacatctccgagcccacgagacctc > SRR14920197.8593463/1‑114 (MQ=60)
GTTTAGCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaaagggggggggggggg > SRR14920197.4896027/1‑65 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaagggggggggggggggggggggggggggggggggg > SRR14920197.5581519/1‑47 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctggttgaagtgggggggggggggggg > SRR14920197.2134416/1‑65 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggg > SRR14920197.7578826/1‑65 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggg > SRR14920197.411000/1‑65 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaagggggggggggggggg > SRR14920197.5353286/1‑65 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaagggggggggggggggg > SRR14920197.5353335/1‑65 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttct > SRR14920197.3105817/1‑90 (MQ=60)
GCTATAATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtctgcg > SRR14920197.4763877/1‑90 (MQ=60)
CTATAATGTTATACATTCAAATGACTGAACATCCTctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaatggggggggggggggggggggggggggggggggggggggggggggg > SRR14920197.2256190/1‑35 (MQ=59)
ATAATGGTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCATTATGCTACTTTGTGCCAATTTGCTAAACATTATGGATGCCTTTTTATATAACGATAATAATGAATATAAGAATGACATGAGAATAAGGTTTaaataatt > SRR14920197.2450219/1‑143 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaaggggggggggggggggggggggggggggggggggggggggggggg > SRR14920197.3486112/1‑36 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaagtgggggggggggggggggggggggggg > SRR14920197.8193508/1‑54 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaatgggggggggggggggggggggggggggg > SRR14920197.2675769/1‑55 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaagagggggggggggggggggggggggggggg > SRR14920197.4453794/1‑55 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggg > SRR14920197.1950380/1‑59 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagggggggggggggggggggggg > SRR14920197.1054294/1‑59 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaaggggggggggggggggggggggg > SRR14920197.2234421/1‑59 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTActgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggg > SRR14920197.9457694/1‑74 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttga > SRR14920197.5432206/1‑84 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttga > SRR14920197.3527398/1‑84 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttc > SRR14920197.6119756/1‑91 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccg > SRR14920197.3785346/1‑96 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgc > SRR14920197.10964493/1‑98 (MQ=60)
ATGTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAG > SRR14920197.10059126/1‑151 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcgtgaaaagggggggggggggggggggggggg > SRR14920197.2228424/1‑57 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCtgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaaggggggggggggggggggg > SRR14920197.3120007/1‑63 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaa > SRR14920197.4966206/1‑82 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaa > SRR14920197.8839435/1‑82 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatcgcgtatgccgtcttctgcttgaaa > SRR14920197.8839752/1‑82 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTctgtctcttatacacatccgagcccacgagacctctctacatcgcgtatgccgtcttctgctt > SRR14920197.2555462/1‑88 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtc > SRR14920197.10097099/1‑94 (MQ=60)
GTTATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtc > SRR14920197.9026337/1‑94 (MQ=60)
ATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaagagg > SRR14920197.1975922/1‑79 (MQ=60)
ATACATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGctgtctcttatacacatctccgagcccacgagacctctctacatctcgtatgccgtcttctgcttgaaaagg > SRR14920197.4461273/1‑79 (MQ=60)
|
CCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATTTTGTGAAAGCAATAAATTATTGACTTCGTTTTAGATTTGTTTAGCTATAATGTTATGCATTCAAATGACTGAACATCCTGTAATTAAAACATAGCCTTTATGCTACTTTGTGCCAATTTGCTAAACATTATGGTTGCCTTTTTATATAACGATAATAATGAATATAAGCATGACATGAGAATAAGGTTTCAATTTTTGAGTTATA > NZ_CP025268/1219184‑1219481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
