Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
11 4 8
12 3 6
3 8 15

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 447 1871
Multiple Base Substitutions 1 1
Deletions 50 168
Insertions 18 120
Mobile Element Insertions 2 5
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 518 2165

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4 2 422.4 11956043 98.9% 11824526 164.0
A11 F56 I0 R1 215 3 141.2 6785521 95.3% 6466601 99.8
A11 F56 I1 R1 155 4 65.2 3164312 95.9% 3034575 99.8
A11 F142 I0 R1 175 2 91.2 4812830 94.5% 4548124 99.7
A11 F142 I1 R1 99 4 64.8 3148104 96.3% 3031624 99.9
A11 F212 I0 R1 246 3 122.0 6097616 93.1% 5676880 99.8
A11 F212 I1 R1 174 3 80.0 3892211 96.7% 3763768 99.9
A11 F256 I0 R1 328 3 102.7 5123138 93.4% 4785010 99.8
A11 F256 I1 R1 186 4 136.5 6958264 92.1% 6408561 99.9
A12 F56 I0 R1 312 1 170.3 8276235 93.7% 7754832 99.8
A12 F56 I1 R1 165 4 53.8 2611523 96.4% 2517508 99.9
A12 F133 I0 R1 200 1 171.4 8351354 94.3% 7875326 99.8
A12 F133 I1 R1 102 3 83.9 4092546 96.1% 3932936 99.9
A12 F204 I0 R1 247 2 174.3 8556966 94.2% 8060661 99.8
A12 F204 I1 R1 117 4 93.2 4682243 93.4% 4373214 99.9

Mutation Needle Plot

Mutation Targets

Entries to show