Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
11 3 3
12 3 3
13 3 3
14 3 3
15 3 3
6 16 16

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 60 114
Multiple Base Substitutions 0 0
Deletions 9 55
Insertions 1 15
Mobile Element Insertions 0 0
Amplifications 44 54
Gene Conversions 0 0
Inversions 0 0
Total 114 238

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 20 0 4827.8 7947866 98.4% 7820700 134.9
A11 F2 I0 R1 166 0 6951.0 8192394 98.4% 8061315 136.4
A11 F13 I0 R1 125 0 11120.0 6942704 98.3% 6824678 135.3
A11 F36 I0 R1 229 0 12610.8 9774876 98.4% 9618477 135.7
A12 F2 I0 R1 184 0 7301.6 8720326 98.4% 8580800 135.6
A12 F13 I0 R1 206 0 15500.2 9478722 98.3% 9317583 135.2
A12 F36 I0 R1 151 0 8012.5 7490824 98.1% 7348498 134.4
A13 F2 I0 R1 130 0 6907.4 7549744 98.4% 7428948 136.0
A13 F13 I0 R1 168 0 14435.1 8204878 98.4% 8073599 135.2
A13 F35 I0 R1 271 0 8871.0 10354886 98.4% 10189207 136.1
A14 F2 I0 R1 145 0 5829.6 7950970 98.4% 7823754 135.6
A14 F13 I0 R1 159 0 9491.7 7979620 98.5% 7859925 135.2
A14 F36 I0 R1 271 0 6613.7 10404966 98.5% 10248891 136.2
A15 F2 I0 R1 130 0 5456.6 6845820 98.4% 6736286 136.2
A15 F13 I0 R1 284 0 16785.3 10492142 98.3% 10313775 134.5
A15 F35 I0 R1 275 0 15706.7 10805118 98.3% 10621430 134.7

Mutation Needle Plot

Mutation Targets

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