mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 792,847 | 0 | G | T | 60.0% | 0.3 / 10.1 | 10 | V280F (GTT→TTT) | modC | molybdenum ABC transporter ATP‑binding protein ModC |
| * | NZ_CP009273 | 4,464,532 | 0 | T | G | 60.0% | 8.5 / 10.5 | 15 | *198G (TGA→GGA) | bdcR | TetR/AcrR family transcriptional regulator |
| * | NZ_CP009273 | 4,224,171 | 0 | A | C | 57.1% | ‑0.6 / 12.1 | 14 | P162P (CCA→CCC) | pgi | glucose‑6‑phosphate isomerase |
| * | NZ_CP009273 | 4,512,823 | 0 | A | C | 57.1% | 10.3 / 14.1 | 14 | G363G (GGT→GGG) | yjhG | xylonate dehydratase YjhG |
| * | NZ_CP009273 | 3,175,957 | 0 | A | T | 54.5% | ‑0.5 / 10.4 | 11 | I17F (ATT→TTT) | zupT | zinc transporter ZupT |
| * | NZ_CP009273 | 4,544,923 | 0 | C | A | 54.5% | ‑1.0 / 10.1 | 11 | N177K (AAC→AAA) | uxuR | Uxu operon transcriptional regulator |
| * | NZ_CP009273 | 1,856,090 | 0 | A | C | 53.8% | 3.1 / 12.4 | 13 | W48G (TGG→GGG) | yeaC | YeaC family protein |
| * | NZ_CP009273 | 3,751,028 | 0 | C | T | 53.8% | 1.0 / 11.9 | 13 | A54T (GCA→ACA) | yiaY | L‑threonine dehydrogenase |
| * | NZ_CP009273 | 4,224,160 | 0 | G | T | 53.3% | 6.4 / 12.9 | 15 | D159Y (GAC→TAC) | pgi | glucose‑6‑phosphate isomerase |
| * | NZ_CP009273 | 4,558,321 | 0 | T | G | 52.4% | 17.9 / 28.5 | 21 | T6P (ACC→CCC) | mdtM | multidrug efflux MFS transporter MdtM |
| * | NZ_CP009273 | 4,594,161 | 0 | C | T | 50.0% | 5.2 / 13.3 | 22 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional activator BglJ |