mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 3592725 = | 198 (0.770) | 7 (0.030) | 4/232 | NT | 3.7% | coding (424/702 nt) | urtE | urea ABC transporter ATP‑binding subunit UrtE |
| ? | NZ_CP034943 | = 3592721 | 185 (0.780) | coding (428/702 nt) | urtE | urea ABC transporter ATP‑binding subunit UrtE | |||||
| * | ? | NZ_CP034943 | 2928129 = | 209 (0.820) | 3 (0.010) | 3/242 | NT | 1.5% | intergenic (‑89/+51) | alaP/asnB | alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing) |
| ? | NZ_CP034943 | = 2928125 | 197 (0.800) | intergenic (‑85/+55) | alaP/asnB | alanine permease AlaP/asparagine synthase (glutamine‑hydrolyzing) | |||||
| * | ? | NZ_CP034943 | = 2653801 | 327 (1.280) | 3 (0.010) | 3/246 | NT | 0.94% | coding (466/1161 nt) | safA | spore coat assembly protein SafA |
| ? | NZ_CP034943 | 2653808 = | 314 (1.260) | coding (459/1161 nt) | safA | spore coat assembly protein SafA | |||||
| * | ? | NZ_CP034943 | = 607222 | 318 (1.240) | 5 (0.020) | 4/230 | NT | 1.6% | coding (65/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607808 = | 307 (1.310) | coding (651/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||