mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 401,700 | T→C | S93P (TCG→CCG) | ybaD → | hypothetical protein |
| RA | 1,305,546 | Δ1 bp | coding (694/1461 nt) | cls ← | cardiolipin synthetase |
| RA | 1,329,516 | C→T | H33Y (CAC→TAC) | topA → | DNA topoisomerase I |
| JC | 1,733,297 | (CGTATGAA)1→2 | coding (333/1413 nt) | pykF → | pyruvate kinase |
| JC JC | 1,812,834 | IS150 (+) +3 bp | coding (92‑94/549 nt) | ynjA → | hypothetical protein |
| RA | 2,164,913 | G→A | T310M (ACG→ATG) | yehU ← | predicted sensory kinase in two‑component system with YehT |
| RA | 2,193,779 | G→T | L143I (CTT→ATT) | yeiB ← | conserved inner membrane protein |
| RA | 3,318,527 | +AC | coding (1393/1446 nt) | tldD ← | predicted peptidase |
| RA | 3,328,417 | G→A | R188C (CGC→TGC) | mreB ← | cell wall structural complex MreBCD, actin‑like component MreB |
| RA | 3,500,634 | T→G | K57T (AAG→ACG) | glgC ← | glucose‑1‑phosphate adenylyltransferase |
| RA | 3,762,741 | A→T | K662I (AAA→ATA) | spoT → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 3,875,632 | (T)7→8 | intergenic (‑66/+287) | glmU ← / ← atpC | bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon |
| MC JC | 3,894,997 | Δ6,934 bp | IS150‑mediated | rbsD–[yieO] | rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO] |
| RA | 3,911,973 | C→T | intergenic (‑174/‑149) | yifB ← / → ilvL | predicted bifunctional enzyme and transcriptional regulator/ilvG operon leader peptide |
| RA | 3,923,350 | T→A | I291N (ATC→AAC) | rep → | DNA helicase and single‑stranded DNA‑dependent ATPase |
| RA | 4,164,589 | C→T | A1245V (GCG→GTG) | rpoB → | DNA‑directed RNA polymerase subunit beta |
| RA | 4,165,277 | A→C | E106A (GAA→GCA) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 4,202,568 | C→T | intergenic (‑9/‑191) | iclR ← / → metH | DNA‑binding transcriptional repressor/B12‑dependent methionine synthase |
| RA | 4,212,474 | Δ1 bp | intergenic (‑310/‑215) | lysC ← / → pgi | aspartate kinase III/glucose‑6‑phosphate isomerase |
| RA | 4,262,746 | C→A | A364S (GCT→TCT) | actP ← | acetate permease |
| JC JC | 4,524,522 | IS186 (+) +6 bp | coding (494‑499/549 nt) | fimA → | major type 1 subunit fimbrin (pilin) |