breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence	position	mutation	annotation	gene	description
RA	474,224	A→G	L361P (CTG→CCG)	ybaL ←	predicted transporter with NAD(P)‑binding Rossmann‑fold domain
RA	886,893	C→A	G334G (GGC→GGA)	ECB_00825 →	putative replication protein for prophage
RA	1,157,919	C→T	G340S (GGC→AGC)	rne ←	fused ribonucleaseE: endoribonuclease/RNA‑binding protein/RNA degradosome binding protein
JC JC	1,305,420	IS150 (–) +3 bp	coding (818‑820/1461 nt)	cls ←	cardiolipin synthetase
RA	1,329,516	C→T	H33Y (CAC→TAC)	topA →	DNA topoisomerase I
JC	1,733,297	(CGTATGAA)1→2	coding (333/1413 nt)	pykF →	pyruvate kinase
RA	2,131,466	(A)9→8	intergenic (‑125/+175)	gatY ← / ← fbaB	D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase
RA	2,193,779	G→T	L143I (CTT→ATT)	yeiB ←	conserved inner membrane protein
RA	3,373,769	C→T	G93S (GGT→AGT)	rplF ←	50S ribosomal protein L6
JC	3,577,728	(GCTGGA)2→3	coding (740/1353 nt)	gor →	glutathione reductase
RA	3,762,741	A→T	K662I (AAA→ATA)	spoT →	bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase
RA	3,838,721	T→G	Y587S (TAC→TCC)	gyrB ←	DNA gyrase subunit B
RA	3,875,632	(T)7→8	intergenic (‑66/+287)	glmU ← / ← atpC	bifunctional N‑acetylglucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyltransferase/F0F1 ATP synthase subunit epsilon
MC JC	3,894,997	Δ6,934 bp	IS150‑mediated	rbsD–[yieO]	rbsD, rbsA, rbsC, rbsB, rbsK, rbsR, [yieO]
RA	3,928,260	T→A	I15N (ATC→AAC)	rho →	transcription termination factor Rho
RA	4,202,405	+A	coding (155/825 nt)	iclR ←	DNA‑binding transcriptional repressor
JC JC	4,524,522	IS186 (+) +6 bp	coding (494‑499/549 nt)	fimA →	major type 1 subunit fimbrin (pilin)