mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 15 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4522063 | 65 (0.760) | 3 (0.040) | 3/242 | NT | 4.7% | intergenic (‑43/+64) | yjhF/yjhG | putative transporter/putative dehydratase |
| ? | NC_000913 | = 4522085 | 62 (0.800) | intergenic (‑65/+42) | yjhF/yjhG | putative transporter/putative dehydratase | |||||
| * | ? | NC_000913 | 3812210 = | 272 (3.200) | 3 (0.040) | 3/256 | NT | 1.0% | coding (350/669 nt) | yicR | UPF0758 family protein |
| ? | NC_000913 | 3812252 = | 311 (3.770) | coding (308/669 nt) | yicR | UPF0758 family protein | |||||
| * | ? | NC_000913 | = 3795026 | 269 (3.160) | 5 (0.060) | 4/248 | NT | 1.9% | coding (98/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_000913 | = 3795059 | 264 (3.300) | coding (131/1047 nt) | waaF | ADP‑heptose:LPS heptosyltransferase II | |||||
| * | ? | NC_000913 | = 3477954 | 65 (0.760) | 3 (0.040) | 3/260 | NT | 4.6% | coding (544/591 nt) | slyD | FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| ? | NC_000913 | = 3478025 | 60 (0.720) | coding (473/591 nt) | slyD | FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) | |||||
| * | ? | NC_000913 | 3446419 = | 90 (1.060) | 3 (0.040) | 3/252 | NT | 3.5% | coding (127/393 nt) | rpsH | 30S ribosomal subunit protein S8 |
| ? | NC_000913 | 3446464 = | 79 (0.970) | coding (82/393 nt) | rpsH | 30S ribosomal subunit protein S8 | |||||
| * | ? | NC_000913 | = 2834066 | 87 (1.020) | 4 (0.050) | 4/256 | NT | 4.4% | coding (155/1134 nt) | norW | NADH:flavorubredoxin oxidoreductase |
| ? | NC_000913 | = 2834081 | 90 (1.090) | coding (170/1134 nt) | norW | NADH:flavorubredoxin oxidoreductase | |||||
| * | ? | NC_000913 | 2064305 = | 96 (1.130) | 3 (0.040) | 3/252 | NT | 3.1% | coding (163/1080 nt) | cobT | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase |
| ? | NC_000913 | 2064343 = | 96 (1.180) | coding (125/1080 nt) | cobT | nicotinate‑nucleotide‑‑dimethylbenzimidazole phosphoribosyltransferase | |||||
| * | ? | NC_000913 | = 1983561 | 73 (0.860) | 3 (0.040) | 3/250 | NT | 3.9% | coding (1509/1515 nt) | araG | L‑arabinose ABC transporter ATPase |
| ? | NC_000913 | = 1983596 | 80 (0.990) | coding (1474/1515 nt) | araG | L‑arabinose ABC transporter ATPase | |||||
| * | ? | NC_000913 | 934900 = | 85 (1.000) | 3 (0.040) | 3/250 | NT | 3.9% | coding (1677/3990 nt) | ftsK | DNA translocase at septal ring sorting daughter chromsomes |
| ? | NC_000913 | 934939 = | 66 (0.820) | coding (1716/3990 nt) | ftsK | DNA translocase at septal ring sorting daughter chromsomes | |||||
| * | ? | NC_000913 | = 756565 | 71 (0.830) | 3 (0.040) | 3/252 | NT | 4.5% | coding (659/1767 nt) | sdhA | succinate dehydrogenase, flavoprotein subunit |
| ? | NC_000913 | = 756599 | 59 (0.730) | coding (693/1767 nt) | sdhA | succinate dehydrogenase, flavoprotein subunit | |||||