mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1197 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 110 (0.890) | 6 (0.050) | 5/164 | NT | 5.0% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 127 (1.120) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4634391 = | 123 (0.990) | 5 (0.040) | 4/164 | NT | 4.2% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 115 (1.010) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | = 4625363 | 125 (1.010) | 3 (0.030) | 3/168 | NT | 2.4% | coding (469/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | = 4625378 | 122 (1.050) | coding (484/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| * | ? | NC_000913 | 4623916 = | 136 (1.100) | 4 (0.030) | 4/166 | NT | 3.2% | coding (202/1017 nt) | lplA | lipoate‑protein ligase A |
| ? | NC_000913 | 4623943 = | 114 (0.990) | coding (175/1017 nt) | lplA | lipoate‑protein ligase A | |||||
| * | ? | NC_000913 | = 4611642 | 118 (0.950) | 5 (0.040) | 4/166 | NT | 4.4% | coding (247/606 nt) | osmY | salt‑inducible putative ABC transporter periplasmic binding protein |
| ? | NC_000913 | = 4611664 | 105 (0.910) | coding (269/606 nt) | osmY | salt‑inducible putative ABC transporter periplasmic binding protein | |||||
| * | ? | NC_000913 | = 4607578 | 109 (0.880) | 7 (0.060) | 3/172 | NT | 6.1% | coding (123/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4607601 | 110 (0.920) | coding (100/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| * | ? | NC_000913 | 4602757 = | 125 (1.010) | 7 (0.060) | 5/164 | NT | 6.1% | coding (102/771 nt) | yjjP | DUF1212 family inner membrane protein |
| ? | NC_000913 | 4602785 = | 101 (0.890) | coding (74/771 nt) | yjjP | DUF1212 family inner membrane protein | |||||
| * | ? | NC_000913 | 4601572 = | 145 (1.170) | 10 (0.090) | 8/162 | NT | 7.4% | intergenic (‑55/+52) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein |
| ? | NC_000913 | 4601608 = | 119 (1.060) | intergenic (‑91/+16) | dnaT/yjjB | DNA biosynthesis protein (primosomal protein I)/DUF3815 family inner membrane protein | |||||
| * | ? | NC_000913 | 4599652 = | 100 (0.810) | 5 (0.040) | 5/164 | NT | 5.2% | intergenic (‑211/+43) | opgB/yjjA | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein |
| ? | NC_000913 | 4599685 = | 92 (0.810) | intergenic (‑244/+10) | opgB/yjjA | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein | |||||
| * | ? | NC_000913 | 4592992 = | 126 (1.020) | 6 (0.050) | 4/170 | NT | 5.1% | coding (1336/1656 nt) | tsr | methyl‑accepting chemotaxis protein I, serine sensor receptor |
| ? | NC_000913 | 4593015 = | 105 (0.890) | coding (1359/1656 nt) | tsr | methyl‑accepting chemotaxis protein I, serine sensor receptor | |||||