mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.29.0 revision 8f9c342918e4
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 1231 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4638329 | 102 (0.980) | 8 (0.080) | 5/168 | NT | 7.3% | coding (152/1353 nt) | creD | inner membrane protein |
| ? | NC_000913 | = 4638348 | 106 (1.080) | coding (171/1353 nt) | creD | inner membrane protein | |||||
| * | ? | NC_000913 | = 4637531 | 87 (0.840) | 9 (0.100) | 7/162 | NT | 9.5% | coding (836/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4637546 | 93 (0.990) | coding (851/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4636885 | 95 (0.920) | 12 (0.120) | 6/168 | NT | 12.0% | coding (190/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB |
| ? | NC_000913 | = 4636902 | 87 (0.890) | coding (207/1425 nt) | creC | sensory histidine kinase in two‑component regulatory system with CreB or PhoB | |||||
| * | ? | NC_000913 | = 4636330 | 87 (0.840) | 10 (0.100) | 6/164 | NT | 10.1% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 98 (1.030) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4635837 = | 115 (1.110) | 9 (0.090) | 8/170 | NT | 8.1% | coding (317/474 nt) | creA | putative periplasmic protein |
| ? | NC_000913 | 4635885 = | 94 (0.950) | coding (365/474 nt) | creA | putative periplasmic protein | |||||
| * | ? | NC_000913 | 4634391 = | 106 (1.020) | 6 (0.060) | 5/164 | NT | 5.8% | coding (595/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | 4634423 = | 98 (1.030) | coding (627/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | = 4634083 | 126 (1.220) | 7 (0.070) | 6/166 | NT | 5.6% | coding (287/648 nt) | ytjC | phosphatase |
| ? | NC_000913 | = 4634095 | 119 (1.230) | coding (299/648 nt) | ytjC | phosphatase | |||||
| * | ? | NC_000913 | 4633257 = | 117 (1.130) | 9 (0.090) | 8/170 | NT | 7.7% | coding (489/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | 4633302 = | 103 (1.040) | coding (444/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | = 4633254 | NA (NA) | 6 (0.060) | 5/168 | NT | 5.5% | coding (492/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| ? | NC_000913 | = 4633303 | 103 (1.050) | coding (443/513 nt) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase | |||||
| * | ? | NC_000913 | = 4631875 | 115 (1.110) | 7 (0.070) | 4/166 | NT | 6.2% | coding (1143/1938 nt) | slt | lytic murein transglycosylase, soluble |
| ? | NC_000913 | = 4631889 | 105 (1.090) | coding (1157/1938 nt) | slt | lytic murein transglycosylase, soluble | |||||