mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 53 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 4590440 | 117 (1.440) | 5 (0.070) | 4/88 | NT | 4.3% | coding (1056/3567 nt) | hsdR | endonuclease R |
| ? | AP009048 | = 4590455 | 115 (1.570) | coding (1041/3567 nt) | hsdR | endonuclease R | |||||
| * | ? | AP009048 | = 4468461 | 116 (1.420) | 4 (0.050) | 3/96 | NT | 3.6% | coding (929/1656 nt) | treC | trehalose‑6‑P hydrolase |
| ? | AP009048 | = 4468484 | 100 (1.250) | coding (906/1656 nt) | treC | trehalose‑6‑P hydrolase | |||||
| * | ? | AP009048 | 4463108 = | 99 (1.220) | 4 (0.050) | 3/96 | NT | 3.6% | coding (470/1353 nt) | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 |
| ? | AP009048 | 4463145 = | 117 (1.470) | coding (507/1353 nt) | pmbA | predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 | |||||
| * | ? | AP009048 | 4462605 = | 105 (1.290) | 4 (0.060) | 3/84 | NT | 5.0% | intergenic (‑60/‑34) | yjgA/pmbA | conserved hypothetical protein/predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 |
| ? | AP009048 | 4462627 = | 63 (0.900) | intergenic (‑82/‑12) | yjgA/pmbA | conserved hypothetical protein/predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 | |||||
| * | ? | AP009048 | = 4431588 | 133 (1.630) | 7 (0.090) | 4/90 | NT | 4.8% | coding (515/795 nt) | yjfZ | hypothetical protein |
| ? | AP009048 | = 4431608 | 158 (2.110) | coding (495/795 nt) | yjfZ | hypothetical protein | |||||
| * | ? | AP009048 | 4425131 = | 123 (1.510) | 5 (0.070) | 4/90 | NT | 4.6% | coding (472/1398 nt) | ulaA | L‑ascorbate‑specific enzyme IIC component of PTS |
| ? | AP009048 | 4425157 = | 96 (1.280) | coding (498/1398 nt) | ulaA | L‑ascorbate‑specific enzyme IIC component of PTS | |||||
| * | ? | AP009048 | 4315115 = | 157 (1.930) | 4 (0.060) | 3/84 | NT | 3.2% | coding (544/1533 nt) | alsA | fused D‑allose transporter subunits and ATP‑binding components of ABC superfamily |
| ? | AP009048 | 4315145 = | 106 (1.520) | coding (514/1533 nt) | alsA | fused D‑allose transporter subunits and ATP‑binding components of ABC superfamily | |||||
| * | ? | AP009048 | 4196939 = | 134 (1.650) | 3 (0.040) | 3/90 | NT | 2.1% | coding (621/1332 nt) | secY | preprotein translocase membrane subunit |
| ? | AP009048 | 4196974 = | 160 (2.140) | coding (656/1332 nt) | secY | preprotein translocase membrane subunit | |||||
| * | ? | AP009048 | 4132585 = | 86 (1.060) | 3 (0.040) | 3/82 | NT | 3.7% | coding (760/879 nt) | php | predicted hydrolase |
| ? | AP009048 | 4132618 = | 83 (1.220) | coding (793/879 nt) | php | predicted hydrolase | |||||
| * | ? | AP009048 | 4121954 = | 134 (1.650) | 4 (0.050) | 4/92 | NT | 3.4% | coding (25/1089 nt) | aroB | 3‑dehydroquinate synthase |
| ? | AP009048 | 4121971 = | 104 (1.360) | coding (42/1089 nt) | aroB | 3‑dehydroquinate synthase | |||||