mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 15,571 | T→C | 100% | L43L (TTG→CTG) | EK12AG100_RS00080 → | IS4‑like element IS421 family transposase |
| RA | 210,842 | C→T | 10.3% | A332A (GCC→GCT) | ldcC → | lysine decarboxylase LdcC |
| RA | 283,927 | G→T | 8.8% | A445A (GCG→GCT) | EK12AG100_RS01390 → | xylonate dehydratase YagF |
| RA | 312,935 | A→G | 6.0% | intergenic (‑301/+173) | EK12AG100_RS01540 ← / ← EK12AG100_RS24935 | hypothetical protein/oxidoreductase |
| RA | 384,896 | A→C | 100% | G122G (GGA→GGC) | tauA → | taurine ABC transporter substrate‑binding protein |
| RA | 472,148 | A→G | 100% | G84G (GGA→GGG) | glnK → | P‑II family nitrogen regulator |
| RA | 575,023 | C→T | 21.6% | G10G (GGG→GGA) | EK12AG100_RS02845 ← | IS5‑like element IS5 family transposase |
| RA | 575,273 | G→T | 90.9% | R2L (CGA→CTA) | rzoD → | prophage lysis lipoprotein RzoD |
| RA | 575,369 | C→G | 9.4% | P34R (CCG→CGG) | rzoD → | prophage lysis lipoprotein RzoD |
| RA | 575,513 | T→C | 5.9% | intergenic (+62/+29) | rzoD → / ← bor | prophage lysis lipoprotein RzoD/serum resistance lipoprotein Bor |
| RA | 575,516 | C→A | 5.4% | intergenic (+65/+26) | rzoD → / ← bor | prophage lysis lipoprotein RzoD/serum resistance lipoprotein Bor |
| RA | 575,547 | G→T | 5.2% | Q97K (CAA→AAA) | bor ← | serum resistance lipoprotein Bor |
| RA | 576,068 | C→T | 5.8% | intergenic (‑233/+57) | bor ← / ← EK12AG100_RS02865 | serum resistance lipoprotein Bor/DUF1398 domain‑containing protein |
| RA | 576,212 | A→G | 47.7% | H108H (CAT→CAC) | EK12AG100_RS02865 ← | DUF1398 domain‑containing protein |
| RA | 576,226 | C→T | 48.9% | V104I (GTT→ATT) | EK12AG100_RS02865 ← | DUF1398 domain‑containing protein |
| RA | 576,326 | G→A | 46.6% | N70N (AAC→AAT) | EK12AG100_RS02865 ← | DUF1398 domain‑containing protein |
| RA | 576,398 | G→A | 47.9% | I46I (ATC→ATT) | EK12AG100_RS02865 ← | DUF1398 domain‑containing protein |
| RA | 576,443 | G→A | 48.4% | N31N (AAC→AAT) | EK12AG100_RS02865 ← | DUF1398 domain‑containing protein |
| RA | 576,481 | C→T | 46.8% | D19N (GAC→AAC) | EK12AG100_RS02865 ← | DUF1398 domain‑containing protein |
| RA | 576,592 | T→C | 50.1% | intergenic (‑57/‑229) | EK12AG100_RS02865 ← / → EK12AG100_RS02870 | DUF1398 domain‑containing protein/hypothetical protein |
| RA | 576,612 | T→C | 47.8% | intergenic (‑77/‑209) | EK12AG100_RS02865 ← / → EK12AG100_RS02870 | DUF1398 domain‑containing protein/hypothetical protein |
| RA | 576,658 | C→A | 46.9% | intergenic (‑123/‑163) | EK12AG100_RS02865 ← / → EK12AG100_RS02870 | DUF1398 domain‑containing protein/hypothetical protein |
| RA | 576,752 | T→C | 45.6% | intergenic (‑217/‑69) | EK12AG100_RS02865 ← / → EK12AG100_RS02870 | DUF1398 domain‑containing protein/hypothetical protein |
| RA | 576,961 | A→G | 47.7% | R47R (AGA→AGG) | EK12AG100_RS02870 → | hypothetical protein |
| RA | 577,056 | T→C | 49.6% | intergenic (+29/+136) | EK12AG100_RS02870 → / ← EK12AG100_RS02875 | hypothetical protein/YlcI/YnfO family protein |
| RA | 577,060 | A→G | 48.8% | intergenic (+33/+132) | EK12AG100_RS02870 → / ← EK12AG100_RS02875 | hypothetical protein/YlcI/YnfO family protein |
| RA | 577,061 | C→T | 49.9% | intergenic (+34/+131) | EK12AG100_RS02870 → / ← EK12AG100_RS02875 | hypothetical protein/YlcI/YnfO family protein |
| RA | 577,243 | T→C | 55.3% | R48R (AGA→AGG) | EK12AG100_RS02875 ← | YlcI/YnfO family protein |
| RA | 577,378 | A→C | 28.4% | T3T (ACT→ACG) | EK12AG100_RS02875 ← | YlcI/YnfO family protein |
| RA | 577,658 | A→G | 93.9% | intergenic (‑272/‑117) | EK12AG100_RS02875 ← / → EK12AG100_RS02885 | YlcI/YnfO family protein/DNA‑packaging protein |
| RA | 577,687 | C→T | 13.2% | intergenic (‑301/‑88) | EK12AG100_RS02875 ← / → EK12AG100_RS02885 | YlcI/YnfO family protein/DNA‑packaging protein |
| RA | 577,771 | T→A | 32.5% | intergenic (‑385/‑4) | EK12AG100_RS02875 ← / → EK12AG100_RS02885 | YlcI/YnfO family protein/DNA‑packaging protein |
| RA | 577,772 | G→A | 32.8% | intergenic (‑386/‑3) | EK12AG100_RS02875 ← / → EK12AG100_RS02885 | YlcI/YnfO family protein/DNA‑packaging protein |
| RA | 577,983 | G→T | 37.9% | R70L (CGG→CTG) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 577,997 | G→A | 36.3% | A75T (GCA→ACA) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 578,014 | G→A | 65.4% | G80G (GGG→GGA) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 578,059 | C→T | 30.6% | D95D (GAC→GAT) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 578,068 | A→G | 29.3% | E98E (GAA→GAG) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 578,074 | A→G | 71.5% | K100K (AAA→AAG) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 578,126 | T→C | 27.4% | L118L (TTG→CTG) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 578,168 | C→A | 30.7% | L132I (CTC→ATC) | EK12AG100_RS02885 → | DNA‑packaging protein |
| RA | 579,538 | T→C | 6.1% | N61S (AAT→AGT) | EK12AG100_RS02895 ← | class I SAM‑dependent methyltransferase |
| RA | 718,545 | A→G | 5.1% | C44R (TGT→CGT) | kdpE ← | two‑component system response regulator KdpE |
| JC | 932,107 | Δ168 bp | 100% | [EK12AG100_RS04715] | [EK12AG100_RS04715] | |
| RA | 1,015,338 | A→C | 100% | L202V (TTA→GTA) | elyC ← | envelope biogenesis factor ElyC |
| RA | 1,123,847 | G→A | 100% | intergenic (+494/‑49) | putP → / → EK12AG100_RS05615 | sodium/proline symporter PutP/FTR1 family protein |
| RA | 1,154,267 | T→C | 5.9% | L289L (TTG→CTG) ‡ | mdoH → | glucans biosynthesis glucosyltransferase MdoH |
| RA | 1,154,268 | T→C | 5.8% | L289S (TTG→TCG) ‡ | mdoH → | glucans biosynthesis glucosyltransferase MdoH |
| RA | 1,232,520 | G→A | 5.1% | T156T (ACC→ACT) | phoP ← | two‑component system response regulator PhoP |
| MC JC | 1,238,818 | Δ84 bp | 100% | coding (1156‑1239/1335 nt) | EK12AG100_RS06230 → | NADP‑dependent isocitrate dehydrogenase |
| RA | 1,332,957 | G→T | 5.9% | A325S (GCC→TCC) | oppF → | murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF |
| RA | 1,363,615 | A→G | 93.3% | S522G (AGC→GGC) | acnA → | aconitate hydratase AcnA |
| RA | 1,518,134 | A→C | 5.1% | E217A (GAG→GCG) | EK12AG100_RS07620 → | ABC transporter permease |
| RA | 1,637,283 | A→G | 7.0% | Q3R (CAA→CGA) | EK12AG100_RS08155 → | recombinase family protein |
| RA | 1,639,728 | T→C | 100% | E98E (GAA→GAG) | EK12AG100_RS08170 ← | DNA‑packaging protein |
| RA | 1,639,737 | G→A | 30.6% | D95D (GAC→GAT) | EK12AG100_RS08170 ← | DNA‑packaging protein |
| RA | 1,639,799 | C→T | 100% | A75T (GCA→ACA) | EK12AG100_RS08170 ← | DNA‑packaging protein |
| RA | 1,639,813 | C→A | 19.8% | R70L (CGG→CTG) | EK12AG100_RS08170 ← | DNA‑packaging protein |
| RA | 1,639,827 | T→C | 18.2% | E65E (GAA→GAG) | EK12AG100_RS08170 ← | DNA‑packaging protein |
| RA | 1,640,036 | A→C | 60.3% | intergenic (‑15/‑374) | EK12AG100_RS08170 ← / → EK12AG100_RS08175 | DNA‑packaging protein/YlcI/YnfO family protein |
| RA | 1,640,067 | C→A | 43.9% | intergenic (‑46/‑343) | EK12AG100_RS08170 ← / → EK12AG100_RS08175 | DNA‑packaging protein/YlcI/YnfO family protein |
| RA | 1,640,077 | T→C | 44.8% | intergenic (‑56/‑333) | EK12AG100_RS08170 ← / → EK12AG100_RS08175 | DNA‑packaging protein/YlcI/YnfO family protein |
| RA | 1,640,109 | G→A | 48.5% | intergenic (‑88/‑301) | EK12AG100_RS08170 ← / → EK12AG100_RS08175 | DNA‑packaging protein/YlcI/YnfO family protein |
| RA | 1,640,138 | T→C | 49.4% | intergenic (‑117/‑272) | EK12AG100_RS08170 ← / → EK12AG100_RS08175 | DNA‑packaging protein/YlcI/YnfO family protein |
| RA | 1,640,157 | C→T | 48.0% | intergenic (‑136/‑253) | EK12AG100_RS08170 ← / → EK12AG100_RS08175 | DNA‑packaging protein/YlcI/YnfO family protein |
| JC | 1,870,601 | Δ182 bp | 85.7% | [EK12AG100_RS09385] | [EK12AG100_RS09385] | |
| RA | 2,484,484 | G→A | 7.3% | S190L (TCA→TTA) | emrY ← | multidrug efflux MFS transporter permease subunit EmrY |
| MC JC | 2,561,645 | Δ90 bp | 100% | [eutA] | [eutA] | |
| JC | 2,694,580 | Δ128 bp | 100% | [EK12AG100_RS25720] | [EK12AG100_RS25720] | |
| RA | 2,783,895 | G→A | 5.1% | intergenic (+157/‑51) | EK12AG100_RS25740 → / → EK12AG100_RS25255 | alpha amylase/alpha amylase |
| RA | 3,067,161 | T→G | 100% | K129N (AAA→AAC) | fbaA ← | class II fructose‑bisphosphate aldolase |
| RA | 3,551,559 | T→G | 5.4% | C655G (TGC→GGC) | malT → | HTH‑type transcriptional regulator MalT |
| RA | 3,556,874 | A→G | 5.8% | V82A (GTC→GCC) | EK12AG100_RS17745 ← | DeoR/GlpR family transcriptional regulator |
| RA | 3,643,941 | T→C | 8.1% | V377A (GTG→GCG) | gorA → | glutathione‑disulfide reductase |
| RA | 3,717,968 | T→C | 8.7% | L259L (CTT→CTC) | EK12AG100_RS25320 → | IS3‑like element IS150 family transposase |
| RA | 3,862,813 | G→A | 6.0% | intergenic (‑28/+168) | EK12AG100_RS19170 ← / ← ibpB | putative transporter/heat shock chaperone IbpB |
| RA | 3,862,823 | A→G | 5.5% | intergenic (‑38/+158) | EK12AG100_RS19170 ← / ← ibpB | putative transporter/heat shock chaperone IbpB |
| RA | 3,872,045 | T→G | 15.8% | H32Q (CAT→CAG) | EK12AG100_RS19225 → | hypothetical protein |
| RA | 3,940,810 | C→T | 100% | noncoding (604/2886 nt) | EK12AG100_RS19545 → | 23S ribosomal RNA |
| RA | 4,022,771 | T→G | 100% | Y437* (TAT→TAG) | ubiD → | 4‑hydroxy‑3‑polyprenylbenzoate decarboxylase |
| RA | 4,023,909 | T→G | 74.6% | intergenic (+208/+173) | EK12AG100_RS19960 → / ← fadA | NAD(P)H‑flavin reductase/acetyl‑CoA C‑acyltransferase FadA |
| RA | 4,023,921 | G→A | 64.7% | intergenic (+220/+161) | EK12AG100_RS19960 → / ← fadA | NAD(P)H‑flavin reductase/acetyl‑CoA C‑acyltransferase FadA |
| RA | 4,023,940 | A→T | 53.3% | intergenic (+239/+142) | EK12AG100_RS19960 → / ← fadA | NAD(P)H‑flavin reductase/acetyl‑CoA C‑acyltransferase FadA |
| RA | 4,023,942 | C→G | 53.3% | intergenic (+241/+140) | EK12AG100_RS19960 → / ← fadA | NAD(P)H‑flavin reductase/acetyl‑CoA C‑acyltransferase FadA |
| RA | 4,023,947 | G→A | 47.1% | intergenic (+246/+135) | EK12AG100_RS19960 → / ← fadA | NAD(P)H‑flavin reductase/acetyl‑CoA C‑acyltransferase FadA |
| RA | 4,033,969 | A→T | 47.0% | intergenic (+161/‑14) | EK12AG100_RS20005 → / → EK12AG100_RS20010 | tRNA‑Ala/23S ribosomal RNA |
| RA | 4,220,111 | T→C | 100% | intergenic (‑10/‑190) | iclR ← / → metH | glyoxylate bypass operon transcriptional repressor IclR/methionine synthase |
| RA | 4,264,972 | T→A | 100% | intergenic (+192/+310) | EK12AG100_RS21080 → / ← EK12AG100_RS25365 | aromatic amino acid transaminase/hypothetical protein |
| RA | 4,292,533 | T→C | 100% | intergenic (+266/+376) | gltP → / ← EK12AG100_RS21205 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,292,663 | A→G | 16.0% | intergenic (+396/+246) | gltP → / ← EK12AG100_RS21205 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,292,664 | A→C | 16.0% | intergenic (+397/+245) | gltP → / ← EK12AG100_RS21205 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,292,741 | C→T | 75.2% | intergenic (+474/+168) | gltP → / ← EK12AG100_RS21205 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,292,759 | C→T | 14.6% | intergenic (+492/+150) | gltP → / ← EK12AG100_RS21205 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,292,853:1 | +CG | 100% | intergenic (+586/+56) | gltP → / ← EK12AG100_RS21205 | glutamate/aspartate:proton symporter GltP/sel1 repeat family protein |
| RA | 4,470,374 | T→C | 5.7% | R52G (AGA→GGA) | bdcA ← | SDR family oxidoreductase |
| RA | 4,543,075 | T→C | 8.9% | I502I (ATT→ATC) | fimD → | fimbrial biogenesis usher protein FimD |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_LN832404 | 575054 | 575260 | 207 | 140 [0] | [41] 43 | EK12AG100_RS02845/rzoD | IS5‑like element IS5 family transposase/prophage lysis lipoprotein RzoD |
| * | * | ÷ | NZ_LN832404 | 822786 | 822992 | 207 | 44 [42] | [2] 119 | [rzoD]–[EK12AG100_RS04195] | [rzoD],[EK12AG100_RS04195] |
| * | * | ÷ | NZ_LN832404 | 1982331 | 1982362 | 32 | 108 [0] | [0] 136 | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
| * | * | ÷ | NZ_LN832404 | 3126612–3127597 | 3127900 | 304–1289 | 43 [42] | [0] 418 | [EK12AG100_RS15510] | [EK12AG100_RS15510] |
| * | * | ÷ | NZ_LN832404 | 3420340–3420992 | 3420992 | 1–653 | 43 [42] | [42] 43 | [EK12AG100_RS17000] | [EK12AG100_RS17000] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_LN832404 | = 61489 | 0 (0.000) | 66 (0.920) | 59/410 | NT | 100% | intergenic (‑76/+87) | EK12AG100_RS23030/rapA | RNA polymerase‑associated protein RapA/RNA polymerase‑associated protein RapA |
| ? | NZ_LN832404 | = 381811 | NA (NA) | coding (847/914 nt) | EK12AG100_RS01865 | IS3‑like element IS2 family transposase | |||||
| * | ? | NZ_LN832404 | 61489 = | 0 (0.000) | 56 (0.820) | 51/394 | NT | 100% | intergenic (‑76/+87) | EK12AG100_RS23030/rapA | RNA polymerase‑associated protein RapA/RNA polymerase‑associated protein RapA |
| ? | NZ_LN832404 | 380645 = | NA (NA) | coding (41/361 nt) | EK12AG100_RS01865 | IS3‑like element IS2 family transposase | |||||
| * | ? | NZ_LN832404 | = 274541 | NA (NA) | 112 (1.130) | 93/566 | NT | 45.2% | intergenic (‑32/‑176) | EK12AG100_RS01335/mmuP | IS5‑like element IS5 family transposase/S‑methylmethionine permease |
| ? | NZ_LN832404 | 576125 = | 136 (1.380) | coding (411/411 nt) | EK12AG100_RS02865 | DUF1398 domain‑containing protein | |||||
| * | ? | NZ_LN832404 | = 381810 | NA (NA) | 77 (1.080) | 71/408 | NT | 100% | coding (846/914 nt) | EK12AG100_RS01865 | IS3‑like element IS2 family transposase |
| ? | NZ_LN832404 | = 932184 | 0 (0.000) | intergenic (‑74/‑445) | EK12AG100_RS04715/EK12AG100_RS04720 | aspartate:alanine antiporter/hypothetical protein | |||||
| * | ? | NZ_LN832404 | = 575053 | 0 (0.000) | 106 (1.170) | 23/520 | NT | 100% | intergenic (‑1/‑216) | EK12AG100_RS02845/rzoD | IS5‑like element IS5 family transposase/prophage lysis lipoprotein RzoD |
| ? | NZ_LN832404 | 1982363 = | 0 (0.000) | intergenic (‑330/‑326) | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC | |||||
| * | ? | NZ_LN832404 | = 578602 | 107 (1.080) | 83 (1.230) | 76/388 | NT | 69.4% | coding (308/744 nt) | EK12AG100_RS02890 | phage terminase large subunit family protein |
| ? | NZ_LN832404 | 822993 = | 0 (0.000) | coding (129/1746 nt) | EK12AG100_RS04195 | phage terminase large subunit family protein | |||||
| * | ? | NZ_LN832404 | 804269 = | 92 (0.930) | 11 (0.120) | 11/536 | NT | 10.2% | intergenic (‑47/+88) | EK12AG100_RS03990/EK12AG100_RS03995 | putative acyl‑CoA thioester hydrolase/tyrosine‑type recombinase/integrase |
| ? | NZ_LN832404 | = 849699 | 107 (1.150) | intergenic (‑750/+106) | EK12AG100_RS04330/EK12AG100_RS04335 | AAA family ATPase/kinase inhibitor | |||||
| * | ? | NZ_LN832404 | 932185 = | 0 (0.000) | 55 (0.790) | 50/398 | NT | 100% | intergenic (‑75/‑444) | EK12AG100_RS04715/EK12AG100_RS04720 | aspartate:alanine antiporter/hypothetical protein |
| ? | NZ_LN832404 | = 1472810 | NA (NA) | coding (39/361 nt) | EK12AG100_RS07405 | IS3‑like element IS2 family transposase | |||||
| * | ? | NZ_LN832404 | = 1423459 | NA (NA) | 101 (1.020) | 7/566 | NT | 100% | intergenic (+146/‑127) | EK12AG100_RS07185/EK12AG100_RS07190 | IS5‑like element IS5 family transposase/DUF2534 family protein |
| ? | NZ_LN832404 | = 1982330 | 0 (0.000) | intergenic (‑297/‑359) | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC | |||||
| * | ? | NZ_LN832404 | = 1423461 | NA (NA) | 87 (0.970) +27 bp |
70/512 | NT | 100% | intergenic (+148/‑125) | EK12AG100_RS07185/EK12AG100_RS07190 | IS5‑like element IS5 family transposase/DUF2534 family protein |
| ? | NZ_LN832404 | = 2242224 | 0 (0.000) | intergenic (‑1/+2) | mglA/mglB | galactose/methyl galactoside ABC transporter ATP‑binding protein MglA/galactose/glucose ABC transporter substrate‑binding protein MglB | |||||
| * | ? | NZ_LN832404 | = 1472808 | NA (NA) | 65 (0.950) | 56/394 | NT | 100% | coding (41/361 nt) | EK12AG100_RS07405 | IS3‑like element IS2 family transposase |
| ? | NZ_LN832404 | = 1870685 | 0 (0.000) | intergenic (‑559/‑65) | EK12AG100_RS09380/EK12AG100_RS09385 | scaffolding protein MipA/protein kinase YeaG | |||||
| * | ? | NZ_LN832404 | = 1474132 | NA (NA) | 115 (1.350) | 102/490 | NT | 100% | coding (1121/1152 nt) | EK12AG100_RS07415 | IS30‑like element IS30 family transposase |
| ? | NZ_LN832404 | 2694668 = | 0 (0.000) | intergenic (‑89/+37) | yfhb/EK12AG100_RS25720 | phosphatidylglycerophosphatase C/phosphatidylglycerophosphatase C | |||||
| * | ? | NZ_LN832404 | = 1655111 | NA (NA) | 54 (0.810) | 51/384 | NT | 100% | pseudogene (616/696 nt) | EK12AG100_RS08315 | IS3‑like element IS2 family transposase |
| ? | NZ_LN832404 | 1870686 = | 0 (0.000) | intergenic (‑560/‑64) | EK12AG100_RS09380/EK12AG100_RS09385 | scaffolding protein MipA/protein kinase YeaG | |||||
| * | ? | NZ_LN832404 | = 2105880 | NA (NA) | 81 (0.930) +32 bp |
70/502 | NT | 100% | intergenic (‑33/+2) | EK12AG100_RS10660/EK12AG100_RS10665 | IS5‑like element IS5 family transposase/glycosyltransferase |
| ? | NZ_LN832404 | 2242225 = | 0 (0.000) | intergenic (‑2/+1) | mglA/mglB | galactose/methyl galactoside ABC transporter ATP‑binding protein MglA/galactose/glucose ABC transporter substrate‑binding protein MglB | |||||
| * | ? | NZ_LN832404 | = 2694669 | 0 (0.000) | 60 (0.890) | 53/386 | NT | 100% | intergenic (‑90/+36) | yfhb/EK12AG100_RS25720 | phosphatidylglycerophosphatase C/phosphatidylglycerophosphatase C |
| ? | NZ_LN832404 | = 4505063 | NA (NA) | coding (29/1152 nt) | EK12AG100_RS22270 | IS30‑like element IS30 family transposase | |||||
| * | ? | NZ_LN832404 | = 3127562 | NA (NA) | 76 (1.080) | 68/404 | NT | 100% | intergenic (+65/+418) | EK12AG100_RS15510/EK12AG100_RS15515 | IS5‑like element IS5 family transposase/lipopolysaccharide biosynthesis protein |
| ? | NZ_LN832404 | 3127901 = | 0 (0.000) | intergenic (+404/+79) | EK12AG100_RS15510/EK12AG100_RS15515 | IS5‑like element IS5 family transposase/lipopolysaccharide biosynthesis protein | |||||
| * | ? | NZ_LN832404 | = 3935137 | 108 (1.090) | 6 (0.060) | 6/566 | NT | 5.3% | coding (399/993 nt) | rbsR | ribose operon transcriptional repressor RbsR |
| ? | NZ_LN832404 | 4494655 = | NA (NA) | intergenic (+241/‑46) | EK12AG100_RS22200/EK12AG100_RS22210 | DUF4102 domain‑containing protein/IS3‑like element IS2 family transposase | |||||
| * | ? | NZ_LN832404 | 4539156 = | 22 (0.220) | 81 (0.850) | 72/548 | NT | 80.9% | intergenic (+49/‑433) | fimE/fimA | type 1 fimbria regulatory protein FimE/metal ABC transporter substrate‑binding lipoprotein/fibrin‑binding adhesin FimA |
| ? | NZ_LN832404 | 4539470 = | 17 (0.180) | intergenic (+363/‑119) | fimE/fimA | type 1 fimbria regulatory protein FimE/metal ABC transporter substrate‑binding lipoprotein/fibrin‑binding adhesin FimA | |||||
| * | ? | NZ_LN832404 | = 4539164 | 22 (0.220) | 97 (1.020) | 89/548 | NT | 83.5% | intergenic (+57/‑425) | fimE/fimA | type 1 fimbria regulatory protein FimE/metal ABC transporter substrate‑binding lipoprotein/fibrin‑binding adhesin FimA |
| ? | NZ_LN832404 | = 4539460 | 17 (0.180) | intergenic (+353/‑129) | fimE/fimA | type 1 fimbria regulatory protein FimE/metal ABC transporter substrate‑binding lipoprotein/fibrin‑binding adhesin FimA | |||||