Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F256 I1 R1
|
186 |
136.5 |
6958264 |
92.1% |
6408561 |
99.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,665,195 |
(T)7→8 |
intergenic (+75/‑120) |
dmsD → / → clcB |
twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,665,188 | 1 | . | T | 96.4%
| 358.2
/ 6.0
| 111 | intergenic (+68/‑127) | dmsD/clcB | twin‑argninine leader‑binding protein for DmsA and TorA/H(+)/Cl(‑) exchange transporter |
| Reads supporting (aligned to +/- strand): ref base . (3/1); new base T (43/63); total (47/64) |
| Fisher's exact test for biased strand distribution p-value = 3.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 132 total aligned reads displayed.
TTCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGC > NC_000913/1665089‑1665282
|
tCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t > 1:2687918/1‑100 (MQ=255)
ccTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑t > 2:1309745/1‑100 (MQ=255)
tCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑ttt < 2:1548334/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttt > 2:1493739/1‑100 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttt < 1:310345/100‑1 (MQ=255)
cgcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttt > 2:19041/1‑100 (MQ=255)
ggtgTTAGACCGCTGTGTCGAGAGGATTAGCGTAATAGTGACGAATGGTGATGATTATGCTCGTTCCGGCAATAATAGGCAACAGGGTCACG‑t‑tt‑tttt < 1:1419025/96‑1 (MQ=255)
gcgcTTAAACCGCTGTTTCGATAGTATCACCGGAATATTGCCGGATGGTGACTATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttt < 2:1156820/99‑1 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑ttttt < 2:2509978/100‑2 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑ttttt > 1:290609/1‑99 (MQ=255)
gcgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttt < 1:2003483/99‑1 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑ttttta > 2:3072093/1‑98 (MQ=255)
cgGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑ttttta > 2:1171734/1‑98 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttttatc < 1:1045461/100‑5 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttttatc < 1:1831011/100‑5 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttttatc > 1:733371/1‑96 (MQ=255)
gTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑t‑tt‑tttttatc > 2:2865325/1‑96 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTAtctc < 1:566815/100‑1 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTAtctc < 1:2960432/100‑1 (MQ=255)
tAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTAtctc > 1:2363554/1‑100 (MQ=255)
aaaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATctct > 1:1256399/1‑100 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCtt < 2:1602486/100‑1 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCtt > 1:3245321/1‑100 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCtt > 1:3321408/1‑100 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCtt > 1:3323925/1‑100 (MQ=255)
aaCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCtt < 1:458657/100‑1 (MQ=255)
aCCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTa > 1:737525/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTaa > 2:1558213/1‑100 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTaa < 2:1297277/100‑1 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTaa < 2:1063225/100‑1 (MQ=255)
ccGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑TATT‑TTTTATCTCTTaa > 2:3418222/1‑100 (MQ=255)
gCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAg < 1:1433350/100‑1 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGTCGGAGGGTGCCGATTCCGCGCAATCCGGCAATAATAGGTTAGAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgc < 1:1893202/98‑1 (MQ=255)
gTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcac > 2:3107140/1‑100 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcacgc < 1:2018820/100‑1 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcacgc < 2:191457/100‑1 (MQ=255)
ttCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcacgc < 1:1644776/100‑1 (MQ=255)
tgtgtAGGATCACCGTAATGTTGCCTGATGGTGACGATTACGCGCAATCGGGCAATAATAGGTTACAGGGTCACG‑T‑TTGTTTTATCTCTTAAAgcacgc < 1:3434447/95‑1 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcacgcac > 2:1466191/1‑100 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcacgcac > 2:2133318/1‑100 (MQ=255)
cGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAgcacgcac < 1:1746905/100‑1 (MQ=255)
gATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACt < 1:3383944/100‑1 (MQ=255)
tAGGATCACCGTAATATTCCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGc < 2:2769656/100‑1 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTTTTTCTTAAAGCACGCACTGCt > 1:3355836/1‑99 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCtt > 2:3115900/1‑100 (MQ=255)
ggATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCttt > 2:3282212/1‑100 (MQ=255)
gATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCttt > 2:3327398/1‑100 (MQ=255)
aTCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCtttt < 1:1722013/100‑1 (MQ=255)
aTCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCtaga > 1:18222/1‑97 (MQ=255)
cACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGc < 1:1589728/100‑1 (MQ=255)
cACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGc < 2:1913064/100‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCg < 2:2030021/100‑1 (MQ=255)
aCCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCg < 2:205434/100‑1 (MQ=255)
cGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGc < 2:2140429/100‑1 (MQ=255)
gTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTg < 1:480517/95‑1 (MQ=255)
tAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTg < 1:642395/100‑1 (MQ=255)
tAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTg < 2:2914554/100‑1 (MQ=255)
aaTATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTgg < 2:526703/100‑1 (MQ=255)
atatTGCCGTATGGAGACGATTACTCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGc < 2:2236358/100‑1 (MQ=255)
atatTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGc < 2:2682584/100‑1 (MQ=255)
tatTGCCGGATGGTAACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGcc < 2:1819124/100‑1 (MQ=255)
gCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtt < 1:842602/100‑1 (MQ=255)
cGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCtttt > 2:2914954/1‑100 (MQ=255)
ggATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTg < 1:2268807/100‑1 (MQ=255)
tGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCg < 2:2182144/100‑1 (MQ=255)
gTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCa > 1:282215/1‑100 (MQ=255)
tgatgaTTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTTTTTTTTTTAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaa > 1:604428/1‑100 (MQ=255)
gACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaa > 2:746191/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 1:2964483/1‑100 (MQ=255)
cGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAt > 2:2152012/1‑100 (MQ=255)
ttACGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCaaaa < 1:2111851/96‑1 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg < 2:821813/100‑1 (MQ=255)
aCGCGCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg < 1:1226915/100‑1 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTTTTAAATTACGCAATGCTTCTGCAGCTACCCTCTTTTGATGCAAAATTGTCg > 1:329085/1‑99 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCg > 1:1419826/1‑99 (MQ=255)
cgcgCAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGc > 2:2585560/1‑100 (MQ=255)
tcaccaTCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGt > 1:3309702/6‑96 (MQ=255)
gcgcAGTCCGGCAATAATAGGTTACAGAGTGACGCT‑TT‑TTTTACCTCTTAGAGCACGACCTGCTTTGGCGGCTGGCCTCTCGTGCCGGAACCTAgccgcc > 1:3229447/1‑100 (MQ=255)
gcAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCg < 1:1169191/100‑1 (MQ=255)
cAATCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgt > 2:78111/1‑100 (MQ=255)
aTCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAGAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtgt < 1:1781822/100‑1 (MQ=255)
aTCCGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtgt < 2:1309686/100‑1 (MQ=255)
cGGCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAACACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCgtgt > 1:2364045/1‑97 (MQ=255)
cGGCAATAATAGGTTACAGTGTCACG‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCa > 1:2012538/1‑100 (MQ=255)
gCAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAt < 2:1926245/100‑1 (MQ=255)
cAATAATAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCAtt < 1:2177942/100‑1 (MQ=255)
aataatAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTg < 2:1741576/100‑1 (MQ=255)
aataatAGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAAGAGTCGCCCGTGTTTCAtt < 1:578031/99‑1 (MQ=255)
ataataGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGc < 2:3007016/100‑1 (MQ=255)
aataGGTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGccc < 1:2991051/100‑1 (MQ=255)
gTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 1:2042574/100‑1 (MQ=255)
gTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc < 2:1264695/100‑1 (MQ=255)
gTTACAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTc > 2:2213149/1‑100 (MQ=255)
aCAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc > 1:2916340/1‑100 (MQ=255)
aCAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGc < 2:3462397/100‑1 (MQ=255)
cAGTGTCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCt < 2:2363586/100‑1 (MQ=255)
gtgtCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCa > 1:1791573/1‑100 (MQ=255)
tgtCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCAt < 2:3333732/100‑1 (MQ=255)
gtCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATg < 2:1325872/100‑1 (MQ=255)
tCACGTT‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGc < 2:2580027/100‑1 (MQ=255)
|
TTCCTGTCGCGGTTAAACCGCTGTTTCGATAGGATCACCGTAATATTGCCGGATGGTGACGATTACGCGCAATCCGGCAATAATAGGTTACAGTGTCACG‑T‑TT‑TTTTATCTCTTAAAGCACGCACTGCTTTTGCGGCTGGCCTCTTTTGCCGCAAAATAGTCGCCCGTGTTTCATTGCCCATTTCTGCTCATGC > NC_000913/1665089‑1665282
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
